73 results on '"Sha, Shi"'
Search Results
2. Coherent signal localization with multiple arrays: a successive perspective
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Haowei Zeng, Sha Shi, Heng Yue, and Jianfeng Li
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Artificial Intelligence ,Hardware and Architecture ,Applied Mathematics ,Signal Processing ,Software ,Computer Science Applications ,Information Systems - Published
- 2023
3. Discussion of 'Some Insights on Flow over Sharp-Crested Weirs Using Computational Fluid Dynamics: Implications for Enhanced Flow Measurement'
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Li Yao, Sha Shi, Hao Chen, and Arniza Fitri
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Agricultural and Biological Sciences (miscellaneous) ,Water Science and Technology ,Civil and Structural Engineering - Published
- 2023
4. Experimental Study on Measurement of Drag Coefficient of Sandy Soil Nonlinear Vadose
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Yu-ping Xu, Jing-yuan Liu, Xiu-wei Chai, and Sha-sha Shi
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Article Subject ,Physics::Geophysics ,Civil and Structural Engineering - Abstract
The seepage characteristics of sand affect its strength, mechanical deformation characteristics, and find safety and stability. The drag coefficient is a dimensionless physical quantity expressing the interaction between fluid and particles, it is also an important parameter that characterizes the permeability of granular soils. Through the seepage test of standard sand with single particle sizes and different grades, analyze the seepage laws of standard sand with different particle sizes in the Darcy and non-Darcy seepage. The relationship between parameters a and b in the seepage equation and porosity (n), average particle size (d50), nonuniformity coefficient (CU), and curvature coefficient (CC), and their influence degree were studied. An empirical formula for determining the permeability coefficient of standard sand is established. By adding a correction factor and verifying its rationality, the empirical formula of standard sand permeability parameters is finally obtained.
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- 2022
5. Bioinformatic Analysis Revealing Independent Predictors of Poor Prognosis and Immunologic/Metastatic Behaviors in Squamous Cell Lung Cancer
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Jinshan Yan, Fangjian Na, Xinyao Li, Sha Shi, Xin Li, Junli Hao, Ying Wu, Xiaoyu Gang, and Mingfang Zhao
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Background Squamous cell carcinoma of the lung (LUSC) is a malignant tumor with a high mortality rate and few treatment options. Methods This study explored novel biomarkers and the related mechanisms in LUSC development via integrated bioinformatics analysis based on multiple databases. TCGA-LUSC, GSE30219, and GSE37745 datasets were selected, and univariate Cox analysis was applied to each. The candidate prognostic genes were those survival hazardous genes that overlapped in the three datasets and were further applied in Kaplan-Meier log-rank test. Receiver-operating characteristics (ROC) curves were made to compare the candidate prognostic genes’ predictive accuracy and traditional clinicopathological parameters (CPPs). Moreover, fast preranked gene set enrichment analysis, single-sample gene set enrichment analysis, gene set variation analysis, and correlation analysis was sequentially performed to explore the candidate prognostic genes’ potential functions. Results Based on the data for stage I–III LUSC, aldehyde dehydrogenase 7 family member A1 (ALDH7A1), progestogen-associated endometrial protein (PAEP), and vav guanine nucleotide exchange factor 2 (VAV2) were identified as prognostic candidate biomarkers that could improve the accuracy of traditional CPPs for predicting overall survival (OS). Moreover, ALDH7A1, PAEP, and VAV2 were, respectively, correlated with the immune microenvironment and epithelial–mesenchymal transition (EMT), but not with tumor mutation burden, microsatellite instability, or CPPs. The EMT biomarker vimentin (but not E-cadherin) was consistent with ALDH7A1, PAEP, and VAV2. Conclusion This study elucidated the prognostic roles and potential functions of ALDH7A1, PAEP, and VAV2 in LUSC.
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- 2022
6. Extended sparse array exploiting fourth-order cumulant for DOA estimation of non-Gaussian signals: Increased DOF perspective
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Sha Shi, Heng Yue, Liancheng Zhao, and Qiang Zhao
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Computational Theory and Mathematics ,Artificial Intelligence ,Applied Mathematics ,Signal Processing ,Computer Vision and Pattern Recognition ,Electrical and Electronic Engineering ,Statistics, Probability and Uncertainty - Published
- 2023
7. A Rate Scalable Construction of Non-Homogeneous Quantum LDPC Codes of CSS Type Based on Balanced Incomplete Block Design
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Xiao Zhuoyan, Chao Wang, Xiong Xingyu, Sha Shi, Yun-Jiang Wang, and Jun-Zhi Yan
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Discrete mathematics ,020206 networking & telecommunications ,Cascading Style Sheets ,02 engineering and technology ,Type (model theory) ,Computer Science Applications ,Block design ,Base (group theory) ,Modeling and Simulation ,Scalability ,0202 electrical engineering, electronic engineering, information engineering ,Electrical and Electronic Engineering ,Low-density parity-check code ,computer ,Quantum ,Decoding methods ,computer.programming_language ,Mathematics - Abstract
Balanced incomplete block design (BIBD) offers an important way to construct non-homogeneous quantum low-density-parity-check (LDPC) codes of Calderbank-Shor-Steane (CSS) type. However, the rates of the quantum codes based on this method are limited to be $1-2/m$ approximately, where $m$ , the number of base blocks chosen from the associated BIBD, is even. We overcome this limitation by providing a rate scalable way to construct non-homogeneous quantum LDPC codes of CSS type. With our method, the rates of the resultant quantum codes are $1-2/m'$ , where $m'=m/e$ and $e\in \{1, 2\}$ . Note that here $m'$ can be odd . Thus, we double the rate range of the codes yielded from the existing strategies. Moreover, one can switch codes between the two rates flexibly adapting to various application scenarios.
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- 2021
8. Prediction of RNA Secondary Structure Using Quantum-inspired Genetic Algorithms
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Le Yang, Sha Shi, Xin-Li Zhang, Yun-Jiang Wang, Wei Du, and Xian-Li Zhao
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0303 health sciences ,Computer science ,020207 software engineering ,02 engineering and technology ,Computational biology ,Biochemistry ,Nucleic acid secondary structure ,03 medical and health sciences ,Computational Mathematics ,0202 electrical engineering, electronic engineering, information engineering ,Genetics ,Molecular Biology ,Quantum ,030304 developmental biology - Abstract
Background: The prediction of RNA secondary structure using optimization algorithms is key to understand the real structure of an RNA. Evolutionary algorithms (EAs) are popular strategies for RNA secondary structure prediction. However, compared to most state-of-the-art software based on DPAs, the performances of EAs are a bit far from satisfactory. Objective: Therefore, a more powerful strategy is required to improve the performances of EAs when applied to the prediciton of RNA secondary structures. Methods: The idea of quantum computing is introduced here yielding a new strategy to find all possible legal paired-bases with the constraint of minimum free energy. The sate of a stem pool with size N is encoded as a population of QGA, which is represented by N quantum bits but not classical bits. The updating of populations is accomplished by so-called quantum crossover operations, quantum mutation operations and quantum rotation operations. Results: The numerical results show that the performances of traditional EAs are significantly improved by using QGA with regard to not only prediction accuracy and sensitivity but also complexity. Moreover, for RNA sequences with middle-short length, QGA even improves the state-of-art software based on DPAs in terms of both prediction accuracy and sensitivity. Conclusion: This work sheds an interesting light on the applications of quantum computing on RNA structure prediction.
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- 2020
9. Screening and identification of Chinese sorghum landraces for salt tolerance at germination and seedling stages
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Ping Lu, Li-Ge Bao, Min-Xuan Liu, Meng-Sha Shi, and Yue Xu
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chemistry.chemical_classification ,Soil salinity ,biology ,Salt (chemistry) ,Plant Science ,biology.organism_classification ,Sorghum ,Inner mongolia ,Crop ,Horticulture ,chemistry ,Dry weight ,Seedling ,Germination ,Agronomy and Crop Science ,Biotechnology - Abstract
The deterioration of soil salinization has caused great harm to modern agricultural production in the world. Sorghum is not only one of five main crops, but also an outstanding salt tolerant crop. The screening and identification of sorghum salt toletion of sorghum salt tolerance will be very important to the development and utilization of salinized land, increasing grain yield and maintaining sustainable agricultural development. In this experiment, 110 sorghum landraces were selected to test salt tolerance at germination (200 mmol L-1 NaCl treated) and seedling stages (100 mmol L-1 NaCl treated). The two germination indicators including the germination potential and the germination rate, as well as seven seedling indicators, including the relative chlorophyll content (SPAD), seedling length, root length, seedling fresh weight, seedling dry weight, root fresh weight, root dry weight were measured. The relative values of various indicators under salt stress were calculated, showing that the relative germination potential and relative germination rate of 110 sorghum landraces were 0 – 98.89% and 23.65 %– 101.79%, and The seven seedling indicators were 59.53% – 99.91%, 52.47% – 95.23%, 47.87% – 100.14%, 27.43% – 95.28%, 30.48% – 98.26%, 21.62% – 100.34%, 31.46% – 102.13%, respectively. Combined the membership function value analysis, principal component analysis with cluster analysis, the salt tolephyll content (SPAD), seedling length, root length, seedling fresh weight, seedling dry weight, root fresh weight, root dry weight were measured. The relative values of various indicators under salt stress were calculated, showing that the relative germination potential and relative germination rate of 110 sorghum landraces were 0 – 98.89% and 23.65 %– 101.79%, and The seven seedling indicators were 59.53% – 99.91%, 52.47% – 95.23%, 47.87% – 100.14%, 27.43% – 95.28%, 30.48% – 98.26%, 21.62% – 100.34%, 31.46% – 102.13%, respectively. Combined the membership function value analysis, principal component analysis with cluster analysis, the salt tolerance ability of the 110 landraces at germination stage and seedling stage was comprehensively evaluated and the 110 landraces were clustered into four groups. A batch of sorghum landraces with salt tolerance at germination and seedling stages were identified, especially ten landraces, including Chaoyangbangchui (00003011) from Inner Mongolia and the Baidazimao (00001081) from Beijing showed high salt tolerance, which can be used in further research. There was no significant correlation in salt toleghum landraces with salt tolerance at germination and seedling stages were identified, especially ten landraces, including Chaoyangbangchui (00003011) from Inner Mongolia and the Baidazimao (00001081) from Beijing showed high salt tolerance, which can be used in further research. There was no significant correlation in salt tolerance between the germination stage and the seedling stage. Principal component analysis results indicated that seedling dry weight and root fresh weight can be used as indicators for the evaluation of salt tolerance of a large number of sorghum landraces at seedling stage.
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- 2020
10. MiR-891a-5p as a prognostic marker and therapeutic target for hormone receptor-positive breast cancer
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Yuee Teng, Lu Xu, Sha Shi, Lijie He, Zhi Li, Zhiqiang Zhang, Kezuo Hou, Xiaonan Shi, Jin Wang, and Xiujuan Qu
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0301 basic medicine ,Oncology ,medicine.medical_specialty ,medicine.drug_class ,miR-383-5p ,ADAM10 ,Metastasis ,03 medical and health sciences ,breast cancer ,0302 clinical medicine ,Breast cancer ,Downregulation and upregulation ,Internal medicine ,microRNA ,medicine ,metastasis ,Gene silencing ,skin and connective tissue diseases ,miR-891a-5p ,business.industry ,medicine.disease ,microRNAs ,030104 developmental biology ,Estrogen ,Hormone receptor ,030220 oncology & carcinogenesis ,prognosis ,business ,Research Paper - Abstract
Background: Breast cancer is one of the most frequent malignant tumors worldwide, with 1.67 million newly-diagnosed cases and 522,000 deaths each year. Therefore, seeking the novel biomarkers and therapeutic targets that contribute to postoperative recurrence and metastasis in patients with breast cancer is emerging and facilitates the development of innovative therapeutics. Methods: Retrieving the dataset of patients with hormone receptor (HR)-positive breast cancers from Gene Expression Omnibus (GEO) and collecting the data from the patients with HR-positive breast cancers enrolled in the First Affiliated Hospital of China Medical University are so as to identify the miRNAs associated with metastasis and distant metastasis-free survival (DMFS). Then MTT and Transwell migration assays were used to validate the effect of miRNAs on cell proliferation and migration of estrogen receptor-positive breast cancer T47D and MCF7 cells in vitro, respectively. Results: From GSE59829 dataset, the miRNA expression levels of miR-891a-5p, miR-383-5p and miR-1295a were significantly downregulated while the levels of miR-128-3p, miR-661 and miR-296-3p were significantly upregulated in breast cancers from patients with metastasis as compared to the matched non-metastatic group. Moreover, low expression levels of miR-891a-5p, miR-383-5p and miR-1295a or high expression levels of miR-128-3p, miR-661 and miR-296-3p were respectively associated with low DMFS in patients with breast cancer. Our clinical cohort study supported that the levels of miR-891a-5p, miR-383-5p and miR-1295a were significantly lower in breast cancers from the metastasis group when compared with non-metastatic group. However, there is no significant difference with regard to the levels of miR-128-3p, miR-661 and miR-296-3p in breast cancer between these two groups. Moreover, low expression levels of miR-891a-5p and miR-383-5p but not miR-1295a in breast cancer were significantly associated with low DMFS in patients, implying that the expression of miR-891a-5p and miR-383-5p were the potential prognosis markers for metastatic human breast cancers. Further investigation disclosed that miR-891a-5p but not miR-383-5p restrained both proliferation and migration of T47D and MCF7 cells. In silico analysis of miRNAs target gene through online computational algorithms revealed that A Disintegrin and metalloproteinase domain-containing protein 10 (ADAM10) is the downstream target for miR-891a-5p. Further study confirmed that miR-891a-5p impeded ADAM10 expression by directly binding to its 3'UTR, leading to the inhibition of breast cancer cells proliferation and migration. Moreover, silencing ADAM10 inhibited T47D and MCF7 cells growth and migration. Conclusion: miR-891a-5p is the vital prognostic marker for HR-positive breast cancer. In addition, miR-891a-5p and miR-383-5p are the potential targets for HR-positive breast cancer therapeutics.
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- 2020
11. Prognostic Value and Influence of Receptor Conversion on Treatment Regimen in Metastatic Breast Cancer at the First Time of Recurrence
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Dongni Wang, Jing Shi, Jing Feng, Jiming Shen, Xu Han, Sha Shi, Yu Shi, Mingfang Sun, Lu Xu, Yuee Teng, Xiaoyi Mi, Lei Zhao, and Qiaochu Wei
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Adult ,Oncology ,Cancer Research ,medicine.medical_specialty ,Receptor Status ,Receptor, ErbB-2 ,Biopsy ,medicine.medical_treatment ,Estrogen receptor ,Breast Neoplasms ,Kaplan-Meier Estimate ,Disease-Free Survival ,Breast cancer ,Internal medicine ,Progesterone receptor ,Biomarkers, Tumor ,medicine ,Humans ,Neoplasm Metastasis ,Receptor ,Aged ,Chemotherapy ,business.industry ,Treatment regimen ,Hematology ,Middle Aged ,Prognosis ,medicine.disease ,Immunohistochemistry ,Metastatic breast cancer ,Survival Rate ,Receptors, Estrogen ,Female ,Neoplasm Recurrence, Local ,Receptors, Progesterone ,business - Abstract
Purpose: At the first time of metastatic breast cancer recurrence, conversion of the receptors status may occur between primary lesions and metastatic lesions, including the estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2). Whether the decision of the treatment regimen is based on the primary receptor status or that of metastatic lesions is still unclear. Methods: This study enrolled 411 female patients with a diagnosis of metastatic breast cancer at the first time of recurrence to explore the influence of receptor conversion on prognosis prediction and treatment regimen of patients with metastatic breast cancer. Results: ER and PR changes from negative to positive are both prognostic factors for patients with breast cancer. Patients receiving endocrine therapy showed a better survival after recurrence than those using chemotherapy alone in the ER or PR Prim– Met+ subgroup. Patients in the HER2 Prim– Met+ subgroup using HER2-targeted therapy in multilines showed a post-recurrence survival advantage. In the bone re-biopsy subgroup, the PR change from positive to negative appeared to be more frequent than at other re-biopsy sites. Conclusions: Patients with metastatic breast cancer should perform re-biopsy to clarify the receptor status of the first metastatic lesions, which may provide clinicians valuable evidence to conduct treatments with higher precision.
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- 2020
12. Physiological and Transcriptome Analyses Reveal the Response of Ammopiptanthus Mongolicus to Extreme Seasonal Temperature in Plateau Cold Desert Ecosystem
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Zimeng Yang, Yiying Liu, Hang Han, Xinyu Zhao, Siyu Chen, Guofang Li, Sha Shi, and Jinchao Feng
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Ammopiptanthus mongolicus is an evergreen broad-leaved shrub living in plateau cold desert ecosystem, which with remarkable tolerance to diverse abiotic stresses. We measured the photosynthetic physiological indexes of A. mongolicus. under extreme seasonal climate in the field, and analyzed the transcriptome of its leaves. We found that the photosynthetic physiological indexes and gene expression at transcriptome level have significant characteristics when temperature changes. Under the low temperature condition, A. mongolicus. consumes excess light energy by increasing PSII non-regulatory energy dissipation Y (NO) at the physiological level. At the molecular level, it resists low temperature stress by changing photosynthesis, circadian rhythm and synthesis of unsaturated fatty acids, but its photosynthetic machinery is still damaged and photosynthesis is blocked. At the physiological level, A. mongolicus. regulates its own water content and improves the regulation of the PSII regulatory energy dissipation Y(NPQ) to consumes excess light energy and to adapt to high temperature stress. At the molecular level, A. mongolicus. protects itself from high temperature and strong light by using the LHCII of PSII to consume excess energy, continuously assembling and maintaining PSII, and changing the production of antioxidants and so on.
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- 2022
13. Physiological and transcriptome analyses reveal the response of Ammopiptanthus mongolicus to extreme seasonal temperatures in a cold plateau desert ecosystem
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Zimeng Yang, Yiying Liu, Hang Han, Xinyu Zhao, Siyu Chen, Guofang Li, Sha Shi, and Jinchao Feng
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Plant Leaves ,Multidisciplinary ,Hot Temperature ,Plant Growth Regulators ,Gene Expression Profiling ,Temperature ,Fabaceae ,Seasons ,Photosynthesis ,Ecosystem - Abstract
Ammopiptanthus mongolicus is the only evergreen broad-leaved shrub present in arid areas of Northwest China and plays an important role in maintaining the stability of the local desert ecosystem. It can survive under extreme temperatures (e.g., extreme low temperature: − 24.8 °C and extreme high temperature: 37.7 °C). To understand the gene expression-physiological regulation network of A. mongolicus in extreme temperature environments, we monitored the changes in gene expression and photosynthetic traits of the leaves. The results showed that at low temperatures, the net photosynthetic rates (A), Fv'/Fm' and electron transport rate (ETR) decreased, the Fv/Fm ratio was only 0.32, and the proportion of nonregulatory heat dissipation Y(NO) increased. Based on a KEGG analysis of the differentially expressed genes, 15 significantly enriched KEGG pathways were identified, which were mainly related to circadian rhythm, photosynthesis, lipid metabolism, carbohydrate metabolism, plant hormones and other life activities. At high temperatures, the A value increased, and the proportion of regulatory energy dissipation Y(NPQ) increased. The KEGG analysis identified 24 significantly enriched KEGG pathways, which are mainly related to circadian rhythm, carbon sequestration of photosynthesis, carotenoid biosynthesis, secondary metabolites, cofactors and vitamin metabolism. In general, at the expense of photosynthesis, A. mongolicus can ensure the survival of leaves by increasing Y(NO) levels, regulating the circadian rhythm, increasing the synthesis of unsaturated fatty acids and changing the role of plant hormones. Under high-temperature stress, a high photosynthetic capacity was maintained by adjusting the stomatal conductance (gsw), increasing Y(NPQ), consuming excess light energy, continuously assembling and maintaining PSII, and changing the production of antioxidants.
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- 2022
14. Etiological and epidemiological features of acute respiratory infections in China
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Xiang Ren, Aili Cui, Lili Ren, Xinhua Wang, Mengyang Liu, Qing-Bin Lu, Tao Jiang, Lu-Sha Shi, An-Ran Zhang, Yang Yang, Sheng-Hong Lin, Yingle Liu, Zuo-Sen Yang, Jianguo Wu, Zhongjie Li, Xiao-Ai Zhang, Mengfeng Li, Jun Li, Wei Liu, Cui-Hong Zhang, Yu-Liang Zhu, Zhenghong Yuan, Simon I. Hay, George F. Gao, Huaiqi Jing, Liu-Yu Huang, Yu Chen, Shengjie Lai, Weizhong Yang, Yi-Fei Wang, Hai-Yang Zhang, Liping Wang, Zhi-Gang Yi, Xin Wang, Luzhao Feng, Li-Qun Fang, Yu Wang, Lei Meng, Zhijie Zhang, Michael P. Ward, Yang Yuan, Shiwen Zhao, Xiao Chen, and Wenbo Xu
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Adult ,Male ,China ,medicine.medical_specialty ,Mycoplasma pneumoniae ,Adolescent ,Epidemiology ,Science ,General Physics and Astronomy ,medicine.disease_cause ,Article ,General Biochemistry, Genetics and Molecular Biology ,Young Adult ,Internal medicine ,Streptococcus pneumoniae ,medicine ,Humans ,Prospective Studies ,Child ,Respiratory Tract Infections ,Acute respiratory tract infection ,Respiratory tract diseases ,Multidisciplinary ,Bacteria ,Respiratory tract infections ,business.industry ,Infant ,Bacterial Infections ,General Chemistry ,medicine.disease ,Pneumonia ,Virus Diseases ,Child, Preschool ,Viruses ,Etiology ,Infectious diseases ,Female ,Seasons ,Rhinovirus ,business - Abstract
Nationwide prospective surveillance of all-age patients with acute respiratory infections was conducted in China between 2009‒2019. Here we report the etiological and epidemiological features of the 231,107 eligible patients enrolled in this analysis. Children, China operates a national surveillance program for acute respiratory infections and sampled over 200,000 patients between 2009–2019. Here, the authors present results from this program and describe patterns by age, pathogen type, presence of pneumonia, and season.
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- 2021
15. Antioxidant interventions in autism spectrum disorders: A meta-analysis
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Yi-Ying Liu, Yang Du, Sha Shi, Zi-Meng Yang, and Yong Cheng
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medicine.medical_specialty ,Autism Spectrum Disorder ,Psychological intervention ,Irritability ,Placebo ,Antioxidants ,law.invention ,Randomized controlled trial ,law ,Internal medicine ,medicine ,Humans ,Biological Psychiatry ,Randomized Controlled Trials as Topic ,Pharmacology ,business.industry ,Publication bias ,medicine.disease ,Acetylcysteine ,Oxidative Stress ,Autism spectrum disorder ,Meta-analysis ,Autism ,medicine.symptom ,Stereotyped Behavior ,business - Abstract
Background Autism spectrum disorder (ASD) might be associated with oxidative stress, and antioxidants are commonly used in the treatment of young people with ASD. However, the evidence about the effectiveness of these interventions remains debatable. We performed a meta-analysis to evaluate the effect of antioxidants on the symptoms of patients with autism. Methods Data sources: PubMed and Web of Science databases. Study selection: We selected placebo-controlled, double-blind, randomized clinical trials published until February 2021 to evaluate the efficacy of antioxidant interventions on ASD. Data analysis: Aberrant Behavior Checklist (ABC), Repetitive Behavior Scale-Revised (RBS), Social Responsiveness Scale (SRS), Developmental Behavior Checklist (DBC) and Clinical Global Impressions Severity scale (CGI S) were used to evaluate the 22 different symptom outcomes. The Hedges-adjusted g value was used to estimate the effect of each dietary intervention relative to the placebo. Results In this meta-analysis, we examined 13 double-blind randomized clinical trials, comprising a total of 570 patients with ASD: 293 in the intervention group and 277 in the placebo group. Antioxidants (N-acetylcysteine (NAC), other antioxidants) are more effective than placebos in improving the irritability among symptoms in the ABC and communication disturbance symptoms in the DBC. There was a good trend of improvement in the stereotypic behavior symptoms in the ABC. Treatment with NAC antioxidants showed a good trend of improvement in irritability in the ABC and symptoms of hyperactivity. The effect size was small, and there was a low risk of statistical heterogeneity and publication bias. Limitations: The number of studies in this meta-analysis was small and the sample size was small. Conclusion This meta-analysis suggests that antioxidant intervention has a potential role in the management of some symptoms in patients with ASD, and indicates the feasibility of using antioxidants to treat autism in the future.
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- 2021
16. A Novel Application of Probabilistic Teleportation: p-Rabin Quantum Oblivious Transfer of a Qubit
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MeiLing Zhang, QingJi Zheng, YuanHua Liu, Jin Li, and Sha Shi
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TheoryofComputation_MISCELLANEOUS ,Security analysis ,Theoretical computer science ,Physics and Astronomy (miscellaneous) ,Oblivious transfer ,010308 nuclear & particles physics ,Computer science ,General Mathematics ,Data_CODINGANDINFORMATIONTHEORY ,Quantum Physics ,01 natural sciences ,Computer Science::Robotics ,Computer Science::Emerging Technologies ,Encoding (memory) ,Qubit ,0103 physical sciences ,State (computer science) ,Computer Science::Data Structures and Algorithms ,010306 general physics ,Protocol (object-oriented programming) ,Realization (systems) ,Quantum ,Computer Science::Cryptography and Security - Abstract
So far, all existing quantum oblivious transfer protocols focused on realization of the oblivious transfer of a classical bit or classical bit-string. In this paper, p-Rabin quantum oblivious transfer of a qubit protocol is achieved by using a probabilistic teleportation protocol. As the probabilistic teleportation protocol is able to transfer an (un)known pure state with a certain probability, this feature makes the probabilistic teleportation protocol well fit for Rabin oblivious transfer. Here, this is the first time that the concept of qubit oblivious transfer is presented. Furthermore, p-Rabin quantum oblivious transfer of a qubit protocol can also be used for oblivious of a bit by encoding classical bit with two pre-agreed orthogonal states. Finally, security analysis shows that the protocol satisfies the security requirements of oblivious transfer, and what’s more, the discussion of relationship with no-go theorem demonstrates that the probabilistic teleportation protocol is able to evade the no-go theorem.
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- 2019
17. De novo transcriptome sequencing and identification of genes related to salt and PEG stress in Tetraena mongolica Maxim
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Ningmei Chen, Junqing He, Sha Shi, Buerbatu Song, Jinchao Feng, Yijun Zhou, Shuai Tang, and Xiaojing Xu
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0106 biological sciences ,0301 basic medicine ,Genetics ,Ecology ,biology ,Physiology ,Plant physiology ,RNA ,Forestry ,Plant Science ,biology.organism_classification ,01 natural sciences ,Transcriptome Sequencing ,Transcriptome ,03 medical and health sciences ,030104 developmental biology ,Zygophyllaceae ,Gene ,Transcription factor ,Tetraena mongolica ,010606 plant biology & botany - Abstract
The first transcriptome analyses of Tetraena mongolica provided 224,618 Unigenes and identified the genes that were differentially expressed under salt and drought conditions, giving some insights into the unique adaptive capacity of this relic plant. Tetraena mongolica Maxim, the only member of the Tetraena genus in the Zygophyllaceae, is endemic to the northwest of China. As one of the relic shrubs of the Paleo-Mediterranean flora, T. mongolica plays a key role in preserving the local ecological environment. To investigate its good adaptability in desert, we studied the transcriptome of T. mongolica under NaCl and PEG6000 stresses. Three libraries were constructed from a mixture of seedlings and mature plants of T. mongolica, and the de novo transcriptome was sequenced using an Illumina HiSeq 4000. Approximately 218.15 million clean reads were assembled de novo into 383,612 transcripts, and 116,027 All-Unigenes were identified. By aligning All-Unigene sequences against the NR database, we found that most of the All-Unigenes had very low matches with the sequences from other plants. A total of 21,112 SSRs and 6 types of SNP variants were identified. The RNA-Seq data revealed 60 transcription factor (TF) families with 3163 genes in total. Six libraries were constructed from the separate control or stressed seedlings, and the transcriptome was sequenced using a BGISEQ-500 platform. There are 1105 and 1383 differentially expressed genes (DEGs) with 42 and 54 TFs under NaCl and PEG6000 treatment, respectively. The genes that were putatively involved in salt and osmotic stresses were searched and analyzed. Quantitative reverse transcription PCR (qRT-PCR) showed that DEG expression profiles were consistent with those from RNA-seq (RNA sequencing). Overall, this study provides new insights into the molecular mechanisms that control salt and drought stress responses in T. mongolica.
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- 2019
18. FEN1 mediates miR‐200a methylation and promotes breast cancer cell growthviaMET and EGFR signaling
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Xue Zeng, Na Zhang, Lu Xu, Kezuo Hou, Yuee Teng, Jing Feng, Yunpeng Liu, Lingyun Zhang, Zhigang Guo, Jiawen Xiao, Chen‑Yang Zhao, Sha Shi, Xiaofang Che, and Xiujuan Qu
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0301 basic medicine ,biology ,Cancer ,Methylation ,medicine.disease ,Biochemistry ,DNA methyltransferase ,Proliferating cell nuclear antigen ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Tumor progression ,microRNA ,Genetics ,medicine ,Cancer research ,biology.protein ,Hepatocyte growth factor ,Epidermal growth factor receptor ,Molecular Biology ,030217 neurology & neurosurgery ,Biotechnology ,medicine.drug - Abstract
Flap endonuclease 1 (FEN1) is recognized as a pivotal factor in DNA replication, long-patch excision repair, and telomere maintenance. Excessive FEN1 expression has been reported to be closely associated with cancer progression, but the specific mechanism has not yet been explored. In the present study, we demonstrated that FEN1 promoted breast cancer cell proliferation via an epigenetic mechanism of FEN1-mediated up-regulation of DNA methyltransferase (DNMT)1 and DNMT3a. FEN1 was proved to interact with DNMT3a through proliferating cell nuclear antigen (PCNA) to suppress microRNA (miR)-200a-5p expression mediated by methylation. Furthermore, miR-200a-5p was identified to repress breast cancer cell proliferation by inhibiting the expression of its target genes, hepatocyte growth factor (MET), and epidermal growth factor receptor (EGFR). Overall, our data surprisingly demonstrate that FEN1 promotes breast cancer cell growth via the formation of FEN1/PCNA/DNMT3a complex to inhibit miR-200a expression by DNMT-mediated methylation and to recover the target genes expression of miR-200a, MET, and EGFR. The novel epigenetic mechanism of FEN1 on proliferation promotion provides a significant clue that FEN1 might serve as a predictive biomarker and therapeutic target for breast cancer.-Zeng, X., Qu, X., Zhao, C., Xu, L., Hou, K., Liu, Y., Zhang, N., Feng, J., Shi, S., Zhang, L., Xiao, J., Guo, Z., Teng, Y., Che, X. FEN1 mediates miR-200a methylation and promotes breast cancer cell growth via MET and EGFR signaling.
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- 2019
19. Prediction of the RNA Secondary Structure Using a Multi-Population Assisted Quantum Genetic Algorithm
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Xin-Li Zhang, Wei Du, Sha Shi, Le Yang, Xian-Li Zhao, and Yun-Jiang Wang
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0303 health sciences ,Base Sequence ,business.industry ,Computer science ,030305 genetics & heredity ,Evolutionary algorithm ,Nucleic acid secondary structure ,03 medical and health sciences ,Software ,Operator (computer programming) ,Genetic algorithm ,Genetics ,RNA ,Quantum algorithm ,Sensitivity (control systems) ,business ,Algorithm ,Algorithms ,Genetics (clinical) ,030304 developmental biology ,Quantum computer - Abstract
Quantum-inspired genetic algorithms (QGAs) were recently introduced for the prediction of RNA secondary structures, and they showed some superiority over the existing popular strategies. In this paper, for RNA secondary structure prediction, we introduce a new QGA named multi-population assisted quantum genetic algorithm (MAQGA). In contrast to the existing QGAs, our strategy involves multi-populations which evolve together in a cooperative way in each iteration, and the genetic exchange between various populations is performed by an operator transfer operation. The numerical results show that the performances of existing genetic algorithms (evolutionary algorithms [EAs]), including traditional EAs and QGAs, can be significantly improved by using our approach. Moreover, for RNA sequences with middle-short length, the MAQGA improves even this state-of-the-art software in terms of both prediction accuracy and sensitivity.
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- 2019
20. Etiological, epidemiological, and clinical features of acute diarrhea in China
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Xinhua Wang, Zhenghong Yuan, Mengyang Liu, Huaiqi Jing, Xiao-Ai Zhang, Jianguo Wu, Shengjie Lai, Xiao Chen, Qing-Bin Lu, Zhongjie Li, Liping Wang, Simon I. Hay, Liu-Yu Huang, Jun Li, Zhi-Gang Yi, Cui-Hong Zhang, Weizhong Yang, Yi-Fei Wang, Yu Chen, George F. Gao, Zuo-Sen Yang, Aili Cui, Shiwen Zhao, Wei Liu, Lu-Sha Shi, Hai-Yang Zhang, Lei Meng, Xiang Ren, Wenbo Xu, Shi-Xia Zhou, Xin Wang, Yu-Liang Zhu, Yingle Liu, Mengfeng Li, Sheng-Hong Lin, Mengjie Geng, and Li-Qun Fang
- Subjects
Rotavirus ,0301 basic medicine ,Epidemiology ,General Physics and Astronomy ,medicine.disease_cause ,0302 clinical medicine ,Salmonella ,Shigella ,030212 general & internal medicine ,Child ,Escherichia coli Infections ,Caliciviridae Infections ,Multidisciplinary ,biology ,Vibrio parahaemolyticus ,Age Factors ,Middle Aged ,Gastroenteritis ,Diarrhea ,Child, Preschool ,Salmonella Infections ,Pathogens ,medicine.symptom ,Adult ,China ,medicine.medical_specialty ,Adolescent ,Science ,030106 microbiology ,Rotavirus Infections ,Article ,General Biochemistry, Genetics and Molecular Biology ,Astrovirus ,Applied microbiology ,Young Adult ,03 medical and health sciences ,Internal medicine ,Escherichia coli ,medicine ,Humans ,business.industry ,Norovirus ,General Chemistry ,biology.organism_classification ,Vibrio Infections ,Etiology ,business - Abstract
National-based prospective surveillance of all-age patients with acute diarrhea was conducted in China between 2009‒2018. Here we report the etiological, epidemiological, and clinical features of the 152,792 eligible patients enrolled in this analysis. Rotavirus A and norovirus are the two leading viral pathogens detected in the patients, followed by adenovirus and astrovirus. Diarrheagenic Escherichia coli and nontyphoidal Salmonella are the two leading bacterial pathogens, followed by Shigella and Vibrio parahaemolyticus. Patients aged, Diarrhoea is a major cause of morbidity and mortality in China. Here, the authors present results from a large sentinel surveillance scheme from 217 hospitals in all 31 provinces in mainland China, including ~150,000 patients with acute diarrhoea and covering years 2009-2018.
- Published
- 2021
21. Characteristics of diarrheagenic Escherichia coli among patients with acute diarrhea in China, 2009‒2018
- Author
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Shi-Xia Zhou, Xiang Ren, Sheng-Hong Lin, Xiao-Ai Zhang, Yu-Liang Zhu, Zhongjie Li, Wei Liu, Lu-Sha Shi, Cui-Hong Zhang, Weizhong Yang, Yi-Fei Wang, Mengjie Geng, Meng-Yang Liu, Qing-Bin Lu, Liping Wang, Li-Qun Fang, and Hai-Yang Zhang
- Subjects
Microbiology (medical) ,Diarrhea ,Male ,medicine.medical_specialty ,Acute diarrhea ,Diarrheagenic Escherichia coli ,business.industry ,Serological assay ,Polymerase Chain Reaction ,Age and gender ,Enteropathogenic Escherichia coli ,Feces ,Infectious Diseases ,Age groups ,Internal medicine ,parasitic diseases ,Epidemiology ,medicine ,Enterotoxigenic Escherichia coli ,Humans ,In patient ,Female ,business ,Child ,Escherichia coli Infections - Abstract
Objectives To investigate the epidemiological features of diarrheagenic Escherichia coli (DEC) in patients with acute diarrhea in China. Methods An active sentinel surveillance was performed in all-age patients with acute diarrhea in China, 2009‒2018. DEC was isolated and identified by serological assay and PCR from stool samples. Results DEC was determined in 6.68% (6,119/91,651) of the patients, with higher positive rates among females than among males (6.97% vs. 6.46%) and among 18‒59 years patients (7.88%) than among other age groups. Five pathotypes were identified, the most prevalent was enteroaggregative E. coli (EAEC), followed by enteropathogenic E. coli (EPEC), and enterotoxigenic E. coli (ETEC). Pediatric patients
- Published
- 2021
22. Photosynthetic acclimation of an evergreen broadleaved shrub (Ammopiptanthus mongolicus) to seasonal climate extremes on the Alxa Plateau, a cold desert ecosystem
- Author
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Qiang Fu, Qiong Yang, Kennedy F. Rubert-Nason, Jinchao Feng, Zhengzhen Li, Sha Shi, and Ximeng Li
- Subjects
0106 biological sciences ,Stomatal conductance ,Ecology ,Physiology ,Desert climate ,AMAX ,ved/biology ,ved/biology.organism_classification_rank.species ,Forestry ,Plant Science ,Evergreen ,Photosynthesis ,010603 evolutionary biology ,01 natural sciences ,Photosynthetic capacity ,Shrub ,Agronomy ,Photosynthetic acclimation ,Environmental science ,010606 plant biology & botany - Abstract
Survival of Ammopiptanthus mongolicus in a cold desert environment is facilitated by high photosynthesis rates in spring and summer, and efficient photoprotective strategies in winter cold. Woody evergreen plants inhabiting cold desert ecosystems must retain their foliage amidst chronically dry conditions and large seasonal temperature variations. To understand the strategies enabling survival of evergreens in these environments, we monitored seasonal changes in foliar gas exchange and photosynthetic traits of Ammopiptanthus mongolicus, an evergreen broadleaved shrub native to the cold desert of northwestern China. We found that photosynthesis was relatively higher in spring and summer and lower in fall and winter. Transitioning from spring to summer, A. mongolicus maintained high photosynthetic capacity (Amax). Transitioning into fall, the Amax and maximum stomatal conductance (gsmax) decreased, while the relative stomatal limitation to photosynthesis (Ls) increased. In winter, A. mongolicus decreased Amax, maximum quantum efficiency of photosystem II (Fv/Fm), maximum RuBisCo carboxylation rates (Vcmax), maximum RuBP regeneration rates (Jmax), and photosynthetic nitrogen-use efficiency (PNUEmax) relative to other seasons. Collectively, these results suggest that A. mongolicus adapts physiologically to maximize carbon assimilation during spring and summer, and to maximize foliar resistance to cold stress at the expense of photosynthesis in winter. Foliage was protected against photo-oxidative damage during temperature extremes in winter by dark-sustained thermal energy dissipation. Overall, our study reveals that multiple photosynthetic adjustments, varying among the seasons, enable the survival of cold desert evergreens.
- Published
- 2018
23. Numerical simulation of hydraulic optimization for regulating tank in pumping station
- Author
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Adelia Agustina, Arniza Fitri, Jing Si, Xiaoming Zhu, Dian Pratiwi, and Sha Shi
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Computer simulation ,Environmental science ,Marine engineering - Abstract
Based on the governing equations of steady incompressible fluid, renormalization group (RNG) turbulence model and SIMPLEC algorithm are used to calculate the steady flow field of regulating tank in the pumping station with six different geometries operating under same condition. The impacts of the layout schemes of guide walls for the flow field of the regulating tank are analyzed. The numerical results are verified by physical model experiment and good agreement is found. The results show that: 1) serious flow separation of side wall will occur in the regulating tank when the interval of diversion wall is 10 L; 2) the flow velocity in the regulating tank will be too low when the diversion wall spacing is 16 L; 3) the improvement of the flow pattern of the regulating tank is not obvious; and the project cost is increased when the excavation depth of the regulating tank is increased by 1 m; 4) the bottom velocity reached the non-silting velocity and the head loss of the regulating tank reducing nearly 1.2 m by using arrangement form of wide 21 L and narrow 10L of the guide walls, which provides a certain guarantee for the safe operation of the pumping station. The regulation tank layout scheme proposed in the paper can be applied to engineering practice.
- Published
- 2021
24. Evaluation of urban water security based on DPSIR model
- Author
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Arniza Fitri, Hao Chen, Xiaojia Yang, Tao Xueting, Xiaona Chen, and Sha Shi
- Subjects
DPSIR ,Environmental science ,Urban water ,Water resource management - Abstract
Assessment of urban water security is an important scientific basis for the sustainable utilization of urban water resources. This study established an evaluation model for urban water security based on DPSIR model, entropy method and comprehensive index method. The model was applied to Gong Qingcheng City (GQCC) in Jiangxi Province, China. An indicator system is developed based on four aspects including social development, water resources status, water pollution and water resources management, as well as summing up predecessors’ experience. This study analysed per capita domestic water consumption; ratio of ecological water compensation; percentage of water conservancy and public infrastructure investment; and water consumption per ten thousand yuan of industrial output value; where ratio of urban sewage treatment are the main effects on urban water security. The results of single index evaluation show that the change of stress subsystem was most dramatic from 2013 to 2017, while others were relatively stable. This indicates that positive interventions were urgently needed to relieve pressure of the stress subsystem. The results of comprehensive index evaluation show that water security at GQCC was in a critical state. In this paper, the causal relationship between social development and water security was clarified while the main factors and other factors affecting urban water security was identified. Finally, a reference for the formulation of urban development planning based on water resources demand was provided.
- Published
- 2021
25. Numerical study on percolation and dam slope’s stability of impermeable wall composed by clay and concrete for earth-rock dam
- Author
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Arniza Fitri, Kai Yu, Sha Shi, Linlu Tan, Xiaoming Zhu, and Jing Si
- Subjects
Percolation ,Geotechnical engineering ,Stability (probability) ,Geology ,Earth (classical element) - Abstract
In order to study the percolation and dam slope’s stability of an impermeable wall composed by clay and concrete for earth-rock dam, the steady seepage field of a reservoir in Jiangxi is numerically simulated by using finite element method based on the basic principles of saturated and unsaturated seepage under different ratios of clay to concrete. The results of the flow field of steady seepage are carried out and the dam slope’s stability is analyzed. We found relatively minor impacts of concrete proportion on the discharge of seepage per unit width and the dam slope’s stability. In this study, the impermeability performance of the impermeable wall is concerned. The results showed that impermeable effect of the impermeable wall has not obviously changed if the concrete proportion is below 0.43. When the proportion of concrete exceeds 0.43, the anti-seepage effect of the impermeable wall begins to change significantly. Besides, when the proportion of concrete reaches 1.0, the reduction of water level at front and behind impermeable wall, the discharge of seepage per unit width, and the safety factor of the Bishop method are all infinitely close to the value of the best anti-seepage performance and the most stable state of the dam slope.
- Published
- 2021
26. Enhanced Successive Cancellation List Decoding of Polar Codes
- Author
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Jing-Liang Gao, Bing Han, Yun-Jiang Wang, and Sha Shi
- Subjects
Theoretical computer science ,Computer science ,Code word ,Sorting ,List decoding ,02 engineering and technology ,Sequential decoding ,01 natural sciences ,010305 fluids & plasmas ,Computer Science Applications ,Modeling and Simulation ,0103 physical sciences ,0202 electrical engineering, electronic engineering, information engineering ,Bit-length ,020201 artificial intelligence & image processing ,Algorithm design ,Electrical and Electronic Engineering ,Algorithm ,Time complexity ,Bitwise operation ,Decoding methods - Abstract
Polar codes can be efficiently decoded by the successive cancellation list (SCL) algorithm in which the sorter plays an important role. The sorter, however, is time-consuming. We significantly improve this decoding scheme by developing a new non-sorting direct selection method for the SCL algorithm. In the non-sorting strategy, we design a new selector for choosing the $L$ best surviving paths, which is achieved by exploiting the bitwise comparison of the candidate path metrics. The analysis and simulation results show that, for $M$ -bit length path metrics, our direct selection method with time complexity $O(ML)$ ) is superior to the latest simplified bubble sorter and the quick sorting strategy whose time complexity is $O(ML^{2})$ and $O(ML \log L)$ , respectively. In the scenario of short codeword length and large list size, our selector can remarkably reduce the latency and the hardware resource consumption while not assuming that the metrics in the decoding are sorted.
- Published
- 2017
27. On the parity-check matrix of generalized concatenated code
- Author
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Sha Shi, Yun-Jiang Wang, Liu Yang, Jing-Liang Gao, and Jun-Zhi Yan
- Subjects
Parity-check matrix ,Finite field ,General Computer Science ,Computer science ,Code (cryptography) ,Coding theory ,Information theory ,Algorithm - Published
- 2019
28. Peripheral Blood and Cerebrospinal Fluid Cytokine Levels in Guillain Barré Syndrome: A Systematic Review and Meta-Analysis
- Author
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Sha Shi, Ting Sun, Yong Cheng, Qing-Shan Liu, and Xi Chen
- Subjects
0301 basic medicine ,medicine.medical_specialty ,medicine.medical_treatment ,Inflammation ,Gastroenterology ,cerebrospinal fluid ,lcsh:RC321-571 ,Proinflammatory cytokine ,03 medical and health sciences ,0302 clinical medicine ,Cerebrospinal fluid ,Internal medicine ,cytokine ,Medicine ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Guillain-Barre syndrome ,business.industry ,General Neuroscience ,peripheral blood ,medicine.disease ,Confidence interval ,meta-analysis ,Guillain Barré Syndrome ,030104 developmental biology ,Cytokine ,inflammation ,Meta-analysis ,Tumor necrosis factor alpha ,Systematic Review ,medicine.symptom ,business ,030217 neurology & neurosurgery ,Neuroscience - Abstract
Background: Guillain Barre Syndrome (GBS) is an autoimmune disorder caused by the immune-mediated damage of the peripheral nervous system. Increasing evidence suggests that inflammatory cytokines are important mediators for the onset and progression of GBS. A number of clinical studies have demonstrated elevated levels of T helper-1 (Th1-), Th2-, and Th17-related cytokines in patients with GBS; however, the results were inconsistent across studies. Methods: We performed a systematic review and a meta-analysis of studies comparing the levels of inflammatory cytokines in the cerebrospinal fluid and peripheral blood between patients with GBS and healthy individuals, using Comprehensive Meta-Analysis Version 2 software. A database search identified 30 studies comprising 1,302 patients with GBS and 1,073 healthy controls. Results: The random-effects meta-analysis demonstrated that peripheral blood tumor necrosis factor-α (Hedges g, 1.544; 95% confidence interval (CI), 0.923–2.165; p < 0.001), interleukin-1β (IL-1β; Hedges g, 0.678; 95% CI, 0.183–1.172; p = 0.007), IL-6 (Hedges g, 0.630; 95% CI, 0.100–1.160; p = 0.02), IL-4 (Hedges g, 0.822; 95% CI, 0.220–1.423; p = 0.007), IL-17 (Hedges g, 1.452; 95% CI, 0.331–2.573; p = 0.011), interferon-γ (Hedges g, 1.104; 95% CI, 0.490–1.719; p < 0.001), and C-reactive protein (Hedges g, 0.909; 95% CI, 0.453–1.365; p < 0.001) levels were significantly increased in patients with GBS when compared with healthy controls. Contrastingly, the blood IL-10 and transforming growth factor-β levels were not significantly associated with GBS. Furthermore, the meta-analysis found that cerebrospinal fluid IL-17 levels were significantly associated with GBS (Hedges g, 1.882; 95% CI, 0.104–3.661; p = 0.038). Conclusion: Altogether, our results clarified the circulating inflammatory cytokine profile in patients with GBS, and revealed that Th1-, Th2-, and Th17-related cytokines were highly elevated in the GBS patients, suggesting the potential use of these cytokines as biomarkers for GBS.
- Published
- 2019
29. GALNT6 promotes breast cancer metastasis by increasing mucin-type O-glycosylation of α2M
- Author
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Lu Zhou, Kezuo Hou, Xiaojie Zhang, Xiujuan Qu, Yu Shi, Xiaoxun Wang, Yunpeng Liu, Yibo Fan, Sha Shi, Ce Li, Chang Liu, Lu Xu, Zhi Li, and Xiaofang Che
- Subjects
Adult ,Male ,Aging ,Glycosylation ,Datasets as Topic ,Breast Neoplasms ,Kaplan-Meier Estimate ,Malignancy ,Metastasis ,Breast Neoplasms, Male ,chemistry.chemical_compound ,Phosphatidylinositol 3-Kinases ,Breast cancer ,α2M ,breast cancer ,Cell Line, Tumor ,Medicine ,Humans ,metastasis ,alpha-Macroglobulins ,Breast ,Stage (cooking) ,Neoplasm Metastasis ,PI3K/AKT/mTOR pathway ,Mastectomy ,Aged ,Neoplasm Staging ,Aged, 80 and over ,O-glycosylation ,Tissue microarray ,business.industry ,Akt/PKB signaling pathway ,Carcinoma, Ductal, Breast ,Cell Biology ,Middle Aged ,medicine.disease ,Prognosis ,GALNT6 ,chemistry ,Tissue Array Analysis ,Cancer research ,N-Acetylgalactosaminyltransferases ,Female ,business ,Proto-Oncogene Proteins c-akt ,Follow-Up Studies ,Signal Transduction ,Research Paper - Abstract
Breast cancer is the most lethal malignancy in women. N-acetylgalactosaminyltransferase 6 (GALNT6) is an enzyme which mediates the initial step of mucin-type O-glycosylation, and has been reported to be involved in mammary carcinogenesis. However, the molecular mechanism of GALNT6 in breast cancer metastasis has not been fully explored. In this study, based on online database analyses and tissue microarrays, the overall survival (OS) of breast cancer patients with high expression of GALNT6 was found to be shorter than those with low expression of GALNT6. Also, high GALNT6 expression was positively correlated with advanced pN stage and pTNM stage. GALNT6 was shown to be able to promote the migration and invasion of breast cancer cells, and enhance the level of mucin-type O-glycosylation of substrates in the supernatants of breast cancer cells. Qualitative mucin-type glycosylomics analysis identified α2M as a novel substrate of GALNT6. Further investigation showed that GALNT6 increased O-glycosylation of α2M, and the following activation of the downstream PI3K/Akt signaling pathway was involved in the promotion of migration and invasion of breast cancer cells. This study identified a new substrate of GALNT6 and provides novel understanding of the role of GALNT6 in promoting metastasis and poor prognosis in breast cancer.
- Published
- 2019
30. FEN1 mediates miR-200a methylation and promotes breast cancer cell growth
- Author
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Xue, Zeng, Xiujuan, Qu, Chenyang, Zhao, Lu, Xu, Kezuo, Hou, Yunpeng, Liu, Na, Zhang, Jing, Feng, Sha, Shi, Lingyun, Zhang, Jiawen, Xiao, Zhigang, Guo, Yuee, Teng, and Xiaofang, Che
- Subjects
Male ,Flap Endonucleases ,Mice, Nude ,Breast Neoplasms ,Methylation ,DNA Methyltransferase 3A ,Epigenesis, Genetic ,Mice ,Cell Line, Tumor ,Proliferating Cell Nuclear Antigen ,Animals ,Humans ,DNA (Cytosine-5-)-Methyltransferases ,Protein Interaction Maps ,Cell Proliferation ,Mice, Inbred BALB C ,Cell Cycle Checkpoints ,Proto-Oncogene Proteins c-met ,ErbB Receptors ,MicroRNAs ,Gene Knockdown Techniques ,Mutation ,MCF-7 Cells ,Heterografts ,Female ,Signal Transduction - Abstract
Flap endonuclease 1 (FEN1) is recognized as a pivotal factor in DNA replication, long-patch excision repair, and telomere maintenance. Excessive FEN1 expression has been reported to be closely associated with cancer progression, but the specific mechanism has not yet been explored. In the present study, we demonstrated that FEN1 promoted breast cancer cell proliferation
- Published
- 2019
31. FEN1 is a prognostic biomarker for ER+ breast cancer and associated with tamoxifen resistance through the ERα/cyclin D1/Rb axis
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Yuee Teng, Xiaofang Che, Lu Xu, Jiming Shen, Yunpeng Liu, Jing Shi, Xiujuan Qu, Jinglei Qu, Sha Shi, Lei Zhao, Na Song, and Kezuo Hou
- Subjects
0301 basic medicine ,Gene knockdown ,business.industry ,General Medicine ,Drug resistance ,medicine.disease ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Breast cancer ,Cyclin D1 ,030220 oncology & carcinogenesis ,Cancer research ,Biomarker (medicine) ,Medicine ,Immunohistochemistry ,Original Article ,Viability assay ,skin and connective tissue diseases ,business ,hormones, hormone substitutes, and hormone antagonists ,Tamoxifen ,medicine.drug - Abstract
Background Tamoxifen is an important choice in endocrine therapy for patients with oestrogen receptor-positive (ER+) breast cancer, and disease progression-associated resistance to tamoxifen therapy is still challenging. Flap endonuclease-1 (FEN1) is used as a prognostic biomarker and is considered to participate in proliferation, migration, and drug resistance in multiple cancers, especially breast cancer, but the prognostic function of FEN1 in ER+ breast cancer, and whether FEN1 is related to tamoxifen resistance or not, remain to be explored. Methods On-line database Kaplan-Meier (KM) plotter, GEO datasets, and immunohistochemistry were used to analyse the prognostic value of FEN1 in ER+ breast cancer from mRNA and protein levels. Cell viability assay and colony formation assays showed the response of tamoxifen in MCF-7 and T47D cells. Microarray data with FEN1 siRNA versus control group in MCF-7 cells were analysed by Gene Set Enrichment Analysis (GSEA). The protein levels downstream of FEN1 were detected by western blot assay. Results ER+ breast cancer patients who received tamoxifen for adjuvant endocrine therapy with poor prognosis showed a high expression of FEN1. MCF-7 and T47D appeared resistant to tamoxifen after FEN1 over-expression and increased sensitivity to tamoxifen after FEN1 knockdown. Importantly, FEN1 over-expression could activate tamoxifen resistance through the ERα/cyclin D1/Rb axis. Conclusions As a biomarker of tamoxifen effectiveness, FEN1 participates in tamoxifen resistance through ERα/cyclin D1/Rb axis. In the future, reversing tamoxifen resistance by knocking-down FEN1 or by way of action as a small molecular inhibitor of FEN1 warrants further investigation.
- Published
- 2021
32. Electrophysiological mechanisms of biased response to smoking-related cues in young smokers
- Author
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Peng Liu, Limei Bu, Yangding Li, Yanzhi Bi, Dahua Yu, Xiaoqi Lu, Yanyan Guan, Kai Yuan, Yajuan Zhang, Sha Shi, and Jiadong Cheng
- Subjects
Adult ,Male ,Cue induced craving ,medicine.medical_specialty ,Audiology ,Positive correlation ,050105 experimental psychology ,Developmental psychology ,Smoking behavior ,Young Adult ,03 medical and health sciences ,Cognition ,0302 clinical medicine ,Cigarette smoking ,medicine ,Humans ,0501 psychology and cognitive sciences ,Young adult ,Craving ,Cerebral Cortex ,General Neuroscience ,Smoking ,05 social sciences ,Electroencephalography ,Event-Related Potentials, P300 ,Electrophysiology ,Positive wave ,Cues ,Psychology ,030217 neurology & neurosurgery - Abstract
Cigarette smoking during young adult may result in serious health issues in later life. Hence, it is extremely necessary to study the smoking neurophysiological mechanisms in this critical transitional period. However, few studies revealed the electrophysiological mechanisms of cognitive processing biases in young adult smokers. In present study, nineteen young smokers with 12 h abstinent and 19 matched nonsmokers were recruited. By employing event-related potentials (ERP) measurements during a smoking cue induced craving task, electrophysiological brain responses were compared between the young adult smokers and nonsmokers. The Slow Positive Wave (SPW) amplitude of smoking-related cues was enhanced in young adult smokers compared with nonsmokers. In addition, increased P300/SPW component of smoking-related cues relative to neutral cues were found in young adult smokers. Meanwhile, a positive correlation between Cigarette Per Day (CPD) and the amplitude of ERPs wave (P300/SPW) at anterior (Fz), central (Cz) were observed in young adult smokers. Our findings provided direct electrophysiological evidence for the cognitive processing bias of smoking cue and may shed new insights into the smoking behavior in young adult smokers.
- Published
- 2016
33. The implication of salience network abnormalities in young male adult smokers
- Author
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Jiadong Cheng, Yanzhi Bi, Wei Qin, Xiaoqi Lu, Sha Shi, Yanyan Guan, Yangding Li, Jie Tian, Kai Yuan, Dahua Yu, and Ting Xue
- Subjects
Male ,Fagerstrom Test for Nicotine Dependence ,medicine.medical_specialty ,Adolescent ,Rest ,Cognitive Neuroscience ,media_common.quotation_subject ,Audiology ,Severity of Illness Index ,behavioral disciplines and activities ,Self-Control ,Developmental psychology ,Executive Function ,Young Adult ,03 medical and health sciences ,Behavioral Neuroscience ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,Neural Pathways ,Fractional anisotropy ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Young adult ,Anterior cingulate cortex ,media_common ,Brain Mapping ,Smokers ,Addiction ,Smoking ,Neuropsychology ,Brain ,Cognition ,Tobacco Use Disorder ,Magnetic Resonance Imaging ,030227 psychiatry ,Inhibition, Psychological ,Psychiatry and Mental health ,Cross-Sectional Studies ,Diffusion Tensor Imaging ,medicine.anatomical_structure ,Neurology ,Stroop Test ,Neurology (clinical) ,Psychology ,030217 neurology & neurosurgery ,Stroop effect - Abstract
Studying the neural correlates of smoking behaviors in young adulthood is of great importance to improve treatment outcomes. In previous addiction studies, the important roles of the salience network (SN) in drug cue processing and cognitive control have been revealed. Unfortunately, few studies focused on the resting-state functional connectivity and structural integrity abnormalities of SN in young adult smokers, and less is known about its association with smoking behaviors and cognitive control deficits. Thirty-one young male adult smokers and 30 age-, education- and gender-matched nonsmokers participated in this study. The structural and functional connectivity differences of SN were investigated between young adult smokers and nonsmokers by using diffusion tensor imaging (DTI) and resting-state functional connectivity (RSFC), which were then correlated with the smoking behavioral assessments (pack-years and Fagerström Test for Nicotine Dependence (FTND)) as well as impaired cognitive control measured by the Stroop task. Within SN, reduced RSFC and increased fractional anisotropy (FA) were found between the anterior cingulate cortex (ACC) and the right insula in young adult smokers relative to nonsmokers. The RSFC between the ACC and right insula was negatively correlated with the number of errors during the incongruent condition of the Stroop task in young adult smokers. Additionally, the right insula-ACC RSFC was negatively correlated with pack-years in young adult smokers. Our results revealed abnormal RSFC and structural integrity within the SN in young adult smokers, which shed new insights into the neural mechanism of nicotine dependence.
- Published
- 2016
34. Cuticle lipids on heteromorphic leaves ofPopulus euphraticaOliv. growing in riparian habitats differing in available soil moisture
- Author
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Jinchao Feng, Buerbatu Song, Kun Xue, Sha Shi, Lei Xiao, Ningmei Chen, Yue Chen, Xiaojing Xu, Matthew A. Jenks, and Yijun Zhou
- Subjects
0106 biological sciences ,0301 basic medicine ,Physiology ,Plant Science ,Cutin ,Biology ,01 natural sciences ,Permeability ,Epicuticular wax ,Membrane Lipids ,Soil ,03 medical and health sciences ,chemistry.chemical_compound ,Rivers ,Botany ,Genetics ,Ecosystem ,Riparian zone ,Wax ,geography ,geography.geographical_feature_category ,Fatty Acids ,Water ,Cell Biology ,General Medicine ,biology.organism_classification ,Lipids ,Arid ,Plant Leaves ,Populus ,030104 developmental biology ,chemistry ,Plant cuticle ,Waxes ,Chlorophyll ,visual_art ,Microscopy, Electron, Scanning ,visual_art.visual_art_medium ,Populus euphratica ,010606 plant biology & botany - Abstract
Populus euphratica is an important native tree found in arid regions from North Africa and South Europe to China, and is known to tolerate many forms of environmental stress, including drought. We describe cuticle waxes, cutin and cuticle permeability for the heteromorphic leaves of P. euphratica growing in two riparian habitats that differ in available soil moisture. Scanning electron microscopy revealed variation in epicuticular wax crystallization associated with leaf type and site. P. euphratica leaves are dominated by cuticular wax alkanes, primary-alcohols and fatty acids. The major cutin monomers were 10,16-diOH C16:0 acids. Broad-ovate leaves (associated with adult phase growth) produced 1.3- and 1.6-fold more waxes, and 2.1- and 0.9-fold more cutin monomers, than lanceolate leaves (associated with juvenile phase growth) at the wetter site and drier site, respectively. The alkane-synthesis-associated ECERIFERUM1 (CER1), as well as ABC transporter- and elongase-associated genes, were expressed at much higher levels at the drier than wetter sites, indicating their potential function in elevating leaf cuticle lipids in the dry site conditions. Higher cuticle lipid amounts were closely associated with lower cuticle permeability (both chlorophyll efflux and water loss). Our results implicate cuticle lipids as among the xeromorphic traits associated with P. euphratica adult-phase broad-ovate leaves. Results here provide useful information for protecting natural populations of P. euphratica and their associated ecosystems, and shed new light on the functional interaction of cuticle and leaf heterophylly in adaptation to more arid, limited-moisture environments.
- Published
- 2016
35. Characterization of the Electric Double Layer Formation Dynamics of a Metal/Ionic Liquid/Metal Structure
- Author
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Elliot Schmidt, Sha Shi, P. Paul Ruden, and C. Daniel Frisbie
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Materials science ,Relaxation (NMR) ,Analytical chemistry ,02 engineering and technology ,Dielectric ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,law.invention ,Switching time ,chemistry.chemical_compound ,Capacitor ,chemistry ,Chemical physics ,law ,Ionic liquid ,Equivalent circuit ,General Materials Science ,0210 nano-technology ,Electrical impedance ,Voltage - Abstract
Although ionic liquids (ILs) have been used extensively in recent years as a high-capacitance "dielectric" in electric double layer transistors, the dynamics of the double layer formation have remained relatively unexplored. Better understanding of the dynamics and relaxation processes involved in electric double layer formation will guide device optimization, particularly with regard to switching speed. In this paper, we explore the dynamical characteristics of an IL in a metal/ionic liquid/metal (M/IL/M) capacitor. In particular, we examine a Au/IL/Au structure where the IL is 1-butyl-1-methylpyrrolidinium tris(pentafluoroethyl)trifluorophosphate. The experiments consist of frequency-dependent impedance measurements and time-dependent current vs voltage measurements for applied linear voltage ramps and abrupt voltage steps. The parameters of an equivalent circuit model are determined by fits to the impedance vs frequency data and subsequently verified by calculating the current vs voltage characteristics for the applied potential profiles. The data analysis indicates that the dynamics of the structure are characterized by a wide distribution of relaxation times spanning the range of less than microseconds to longer than seconds. Possible causes for these time scales are discussed.
- Published
- 2016
36. Spread of Staphylococcus aureus between medical staff and high-frequency contact surfaces in a large metropolitan hospital
- Author
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Xiao-feng Zhou, Li-sha Shi, Hong-bing Jia, Wei Chen, Xiu-hua Li, and Chun-juan Xu
- Subjects
lcsh:RT1-120 ,medicine.medical_specialty ,Medical staff ,lcsh:Nursing ,business.industry ,media_common.quotation_subject ,Hospital employees ,medicine.disease_cause ,medicine.disease ,Metropolitan area ,Hand contamination ,Nosocomial infection ,Contact surfaces ,Staphylococcus aureus ,Hygiene ,Medical intensive care unit ,Pathogenic bacteria ,medicine ,Cross-contamination ,Medical emergency ,Intensive care medicine ,business ,General Nursing ,media_common - Abstract
Objective To examine whether bacteria are transferred between the hands of medical staff and high-frequency contact surfaces within and between departments of a major metropolitan hospital, and to further analyze the patterns of cross-transmission. Methods Microbiological samples were collected from the hands of 112 hospital employees as well as from 120 high-frequency contact surfaces in four hospital departments. Samples were collected on agar plates, analyzed for the presence of Staphylococcus aureus or methicillin-resistant S. aureus (MRSA) by standard microbiology testing, and partially genotyped using pulsed-field gel electrophoresis. Results Genetically identical MRSA was identified on the surface of an electrocardiography device in the medical intensive care unit and on the same type of device in the neurosurgical unit. Genetically similar S. aureus was identified on an infusion pump in the medical intensive care unit and on the hands of several doctors in a different department who regularly use that pump. Genetically identical S. aureus was also identified on bedside rail restraint in the medical intensive care unit and on the hands of the nurse in the neurosurgical unit. Finally, genetically similar MRSA was identified both on the surface of an electrocardiography device and on the suction apparatus in the medical intensive care unit. Conclusion Cross-contamination of S. aureus or MRSA on medical workers' hands and contact surfaces was demonstrated within and between departments of a large metropolitan hospital. Improvements are needed in medical staff hygiene habits and in the cleaning of high-frequency contact surfaces to help prevent and control nosocomial infections.
- Published
- 2015
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37. Comparative analyses of leaf cuticular lipids of two succulent xerophytes of the Ordos Plateau (Gobi Desert), Tetraena mongolica maxim and Zygophyllum xanthoxylum (Bunge) Engl
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Sha Shi, Matthew A. Jenks, Xiaojing Xu, Minqi Zhou, Yijun Zhou, Yanli Zou, Jinchao Feng, Junqing He, and Ningmei Chen
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0106 biological sciences ,0301 basic medicine ,Wax ,ved/biology ,fungi ,Drought tolerance ,ved/biology.organism_classification_rank.species ,food and beverages ,Plant Science ,Cutin ,Biology ,01 natural sciences ,Shrub ,03 medical and health sciences ,030104 developmental biology ,Plant cuticle ,visual_art ,Botany ,visual_art.visual_art_medium ,Extreme environment ,Zygophyllum xanthoxylum ,Water-use efficiency ,Agronomy and Crop Science ,Ecology, Evolution, Behavior and Systematics ,010606 plant biology & botany - Abstract
Tetraena mongolica Maxim, a relic shrub of the paleo-Mediterranean flora, is normally accompanied in the Western Ordos desert by another plant species in the same taxonomic family, Zygophyllum xanthoxylum (Bunge) Maxim, and together they play a vital role in the ecology of the local environment. Z. xanthoxylum has been identified as having stronger drought tolerance than T. mongolica. As an important water barrier, cuticles were compared between these two relatives to better reveal the mechanism of their different drought tolerance. Z. xanthoxylum possesses more flattened wax crystals, lower epidermal permeability and higher water use efficiency (WUE) than T. mongolica. The composition of cuticular lipids were analyzed, and the results showed that Z. xanthoxylum had significantly higher total amounts of both cuticular wax and cutin monomers than T. mongolica, with all wax class (especially alkanes) and cutin monomer amounts being much higher in Z. xanthoxylum. Cuticle-associated genes were analyzed by transcriptome sequencing, and the results showed that more alkane synthesis genes were up-regulated in Z. xanthoxylum. These findings provide different cuticles on these two succulent xerophytes and reveal the relationships with their different drought tolerance. This study is helpful to reveal the function of plant cuticle in adaptability to extreme environments.
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- 2020
38. Aquilariaenes A-H, eight new diterpenoids from Chinese eaglewood
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Shunxing Guo, Aijing Liu, Peiyi Guo, Jungui Dai, Song-yang Sui, Sha Shi, and Lin Yang
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Serotonin ,Stereochemistry ,Phytochemicals ,01 natural sciences ,chemistry.chemical_compound ,Norepinephrine ,Drug Discovery ,Animals ,Petroleum ether ,Abietane ,Pharmacology ,Molecular Structure ,010405 organic chemistry ,Chemistry ,General Medicine ,Rat brain ,Antidepressive Agents ,0104 chemical sciences ,Rats ,010404 medicinal & biomolecular chemistry ,Thymelaeaceae ,Antidepressant ,Diterpenes ,Two-dimensional nuclear magnetic resonance spectroscopy ,Norepinephrine reuptake ,Synaptosomes - Abstract
Aquilariaenes A-H (1-8), eight new diterpenoids and nor-diterpenoids (1-8) belonging to abietane or pimarane, were isolated from the petroleum ether extract of Chinese eaglewood. Their structures were elucidated on the basis of extensive spectroscopic methods including HRESIMS, IR, 1D and 2D NMR spectroscopic data analyses. Antidepressant activities of isolates for in vitro inhibition of serotonin and norepinephrine reuptake in rat brain synaptosomes were evaluated.
- Published
- 2018
39. SIRT5 as a biomarker for response to anthracycline-taxane-based neoadjuvant chemotherapy in triple-negative breast cancer
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Xinlian Zhang, Ying Wu, Xiaofang Che, Na Song, Lingyun Zhang, Shuo Wang, Xiujuan Qu, Yuee Teng, Ce Li, Lu Xu, and Sha Shi
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Bridged-Ring Compounds ,0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Triple Negative Breast Neoplasms ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Cell Line, Tumor ,Internal medicine ,Biomarkers, Tumor ,medicine ,Humans ,Sirtuins ,Anthracyclines ,Neoadjuvant therapy ,Triple-negative breast cancer ,Predictive marker ,Taxane ,business.industry ,Gene Expression Profiling ,Cancer ,General Medicine ,medicine.disease ,Survival Analysis ,Neoadjuvant Therapy ,Gene Expression Regulation, Neoplastic ,Treatment Outcome ,030104 developmental biology ,Docetaxel ,030220 oncology & carcinogenesis ,Female ,Taxoids ,business ,Epirubicin ,medicine.drug - Abstract
Neoadjuvant chemotherapy (NAC) is of great importance for patients with triple-negative breast cancer (TNBC) and the achievement of pathological complete response (pCR) to NAC in TNBC patients indicates survival benefits. However, the identification of reliable predictive biomarkers of pCR to NAC in TNBC patients remains an urgent and largely unattended medical issue. In the present study, we evaluated the differentially expressed genes (DEGs) between pCR and non-pCR patients after doxorubicin/cyclophosphamide therapy, followed by paclitaxel pre-operative treatment in 64 TNBC patients recorded in the GSE41998 dataset of Gene Expression Omnibus and identified 118 DEGs. Subsequently, we selected five core genes that were closely associated with the pCR of TNBC patients by using a genetic algorithm‑support vector machine-based method. Sirtuin 5 (SIRT5) was one of the five core genes and patients who achieved pCR expressed higher levels of SIRT5. Thus, we speculated that SIRT5 may be a potential predictive marker of the response to anthracycline-taxane-based chemotherapy. Oncomine analysis revealed that the expression levels of SIRT5 were higher in epirubicin/cyclophosphamide-docetaxel responders compared with non-responders. Furthermore, Gene Ontology analysis indicated that SIRT5 may affect the response to anthracycline-taxane-based chemotherapy by regulating the Rho pathway. It was also observed that SIRT5 was upregulated in TNBC and breast cancer with BRCA1 mutation subtypes. High SIRT5 expression was also associated with poor clinical outcomes of breast cancer patients. In conclusion, the present study revealed SIRT5 as a biomarker for response to anthracycline-taxane-based NAC in patients with TNBC and identified a series of novel biological functions of SIRT5 in breast cancer.
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- 2018
40. A novel application of probabilistic teleportation: p-Rabin qubit-oblivious transfer
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MeiLing, Zhang, Jin, Li, YuanHua, Liu, sha, Shi, Dong, Zheng, QingJi, Zheng, and Min, Nie
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Quantum Physics ,FOS: Physical sciences ,Quantum Physics (quant-ph) - Abstract
All existing quantum oblivious transfer protocols are to realize the oblivious transfer of bit or bit-string. In this paper, p-Rabin quantum oblivious transfer of a qubit (abbr. p-Rabin qubit-OT) is achieved by using a probabilistic teleportation (abbr. PT) protocol. Here, this is the first time that the concept of qubit-OT is presented. As the PT protocol is able to transfer an (un)known pure state with a certain probability, this feature makes the PT protocol well fit for Rabin OT. Furthermore, the PT protocol can be used for OT of a bit by encoding classical bit with two pre-agreed orthogonal states. Finally, security analysis shows that the PT protocol can be against participants attacks, and what's more, the discussion of relationship with no-go theorem demonstrates that the PT protocol is able to evade the no-go theorem., Comment: 11 pages
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- 2018
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41. Deceleration efficiencies of shrub windbreaks in a wind tunnel
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Xiaoxu Wu, Sha Shi, Na Zhou, Xueyong Zou, and Chunlai Zhang
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Hydrology ,Wind gradient ,ved/biology ,Velocity gradient ,Agroforestry ,ved/biology.organism_classification_rank.species ,Airflow ,Geology ,Windbreak ,Shrub ,Arid ,Wind speed ,Environmental science ,Earth-Surface Processes ,Wind tunnel - Abstract
Artemisia and Salix are dominant shrub species for windbreaks in arid areas of China, and they show similar features to shrubs in other arid areas of the world. We compared the mean velocity fields and shelter effects of two shrub windbreaks with different layouts. For a single plant of Artemisia, the higher the free airflow velocity is, the more the wind velocity around two sides of the plant increases. The velocity gradient around a single plant of Salix is smaller than that around an Artemisia plant due to the difference in the plant shapes. Seven new velocity zones in the horizontal direction appear when airflow passes through an Artemisia windbreak, including four deceleration zones and three acceleration zones. The mean velocity field that is affected by a Salix windbreak can be divided into a deceleration zone in the front, an acceleration zone above, a vortex zone behind and a restoration zone downwind of the vortex zone. Shelter effects of the shrub windbreaks vary with the wind velocity and are influenced by the construct of the windbreaks. Shrub windbreaks that have a complex construction have better shelter effects than simple ones. The shelter effects of plant windbreaks are also influenced by the growth features of the plants. Considering the plant characteristics and the shelter effects of Salix and Artemisia windbreaks, it is optimal to plant these two windbreaks together in a sand-control system. This research is intended to be useful for sand movement control in arid areas.
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- 2015
42. Theory of magnetoresistance of organic molecular tunnel junctions with nonmagnetic electrodes
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P. Paul Ruden, Zuoti Xie, Darryl L. Smith, Sha Shi, Feilong Liu, C. Daniel Frisbie, and Molecular Materials and Nanosystems
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Physics ,Condensed matter physics ,Magnetoresistance ,02 engineering and technology ,Condensed Matter::Mesoscopic Systems and Quantum Hall Effect ,021001 nanoscience & nanotechnology ,01 natural sciences ,Magnetic field ,Tunnel magnetoresistance ,0103 physical sciences ,Coulomb ,Charge carrier ,Singlet state ,010306 general physics ,0210 nano-technology ,Spin (physics) ,Quantum tunnelling - Abstract
Large room-temperature magnetoresistance observed for devices composed of self-assembled monolayers of different oligophenylene thiols sandwiched between gold contacts has recently been reported [Z. Xie, S. Shi, F. Liu, D. L. Smith, P. P. Ruden, and C. D. Frisbie, ACS Nano 10, 8571 (2016)10.1021/acsnano.6b03853]. The transport mechanism through the organic molecules was determined to be nonresonant tunneling. To explain this kind of magnetoresistance, we develop an analytical model based on the interaction of the tunneling charge carrier with an unpaired charge carrier populating a contact-molecule interface state. The Coulomb interaction between carriers causes the transmission coefficients to depend on their relative spin orientation. Singlet and triplet pairing of the tunneling and the interface carriers thus correspond to separate conduction channels with different transmission probabilities. Spin relaxation enabling transitions between the different channels, and therefore tending to maximize the tunneling current for a given applied bias, can be suppressed by relatively small magnetic fields, leading to large magnetoresistance. Our model elucidates how the Coulomb interaction gives rise to transmission probabilities that depend on spin and how an applied magnetic field can inhibit transitions between different spin configurations.
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- 2017
43. Pyogenic Granuloma of the Esophagus
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Jingrun Zhao, Sha Shi, and Qian Feng
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Male ,medicine.medical_specialty ,Radiography ,Esophageal Diseases ,Endosonography ,03 medical and health sciences ,0302 clinical medicine ,X ray computed ,Medicine ,Humans ,Esophagus ,Granuloma, Pyogenic ,Microscopy ,Hepatology ,business.industry ,Pyogenic granuloma ,Histocytochemistry ,Gastroenterology ,Middle Aged ,medicine.disease ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Granuloma ,030211 gastroenterology & hepatology ,Radiography, Thoracic ,Radiology ,Esophagoscopy ,business ,Tomography, X-Ray Computed - Published
- 2017
44. Preliminary Research on One Multiband Smoke Material Preparation
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Heng Liu, Jin Song Zhu, Sha Shi Zhang, Wei Dong Xu, and Jiang Hua Wu
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Engineering ,Thermal infrared ,business.industry ,Attenuation ,General Engineering ,Laser ,law.invention ,Optics ,Interference (communication) ,law ,Camouflage ,Electromagnetic shielding ,Extremely high frequency ,business - Abstract
Precision guided weapons (PGWs) have valuable application in field warfare. In order to interfere with Laser, Thermal Infrared (TIR) and Television guidance, this paper intends to research and develop a smoke-generating material that is capable of shielding visible lights, TIR and Millimeter Wave (MMW), based on the attenuation characteristic of expandable graphite to IR and MMW. The formulation is studied by orthogonal design, camouflage effect is verified by experiment, and the material with multiband interfering capacity is preliminarily prepared.
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- 2014
45. Design and fabrication of diverse three-dimensional shell-like nano-structures
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Song Ye, Sha Shi, Jinglei Du, Yidong Hou, Yarong Su, Fuhua Gao, and Shuhong Li
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Fabrication ,Materials science ,Shell (structure) ,Metamaterial ,Nanotechnology ,Construct (python library) ,Type (model theory) ,Condensed Matter Physics ,Topology ,Atomic and Molecular Physics, and Optics ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Harmonic ,Electrical and Electronic Engineering ,Geometric modeling ,Generator (mathematics) - Abstract
The shell-like nano-structures (SLSs) own special ability to manipulate electromagnetic waves, and can be used as three-dimensional (3D) nano-antenna, highly efficient generator of second harmonic light, chiral metamaterials, and so on. However, to achieve this complicated geometry shape still remains challenging, which limits the related applications. In this paper, we propose a new method based on the microsphere self-assembly technology (MAT) to fabricate this type nano-structures, which is the use of basic SLSs (such as nano-cups or fragmented shells) as building blocks (BBs) to construct desired SLSs, just like that in architecture. Through establishing and using the related 3D geometric model, we design a great many of new SLSs, include some interesting structures, such as T-shape, 'maple leaf'-shape, and boat-shape structures. In theory, the number is infinite. In experiment, some new SLSs have been achieved, and their geometrical morphologies agree well with the designed. These new SLSs will provide a foundation for the related researches and applications.
- Published
- 2014
46. Charge Density Dependent Two-Channel Conduction in Organic Electric Double Layer Transistors (EDLTs)
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P. Paul Ruden, Sha Shi, C. Daniel Frisbie, Wei Xie, and Feilong Liu
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Materials science ,Condensed matter physics ,Astrophysics::High Energy Astrophysical Phenomena ,Mechanical Engineering ,Transistor ,Analytical chemistry ,Charge density ,Trapping ,Conductivity ,Thermal conduction ,law.invention ,General Relativity and Quantum Cosmology ,chemistry.chemical_compound ,chemistry ,Mechanics of Materials ,law ,Percolation ,General Materials Science ,Rubrene ,Communication channel - Abstract
A transport model based on hole-density-dependent trapping is proposed to explain the two unusual conductivity peaks at surface hole densities above 10(13) cm(-2) in rubrene electric double layer transistors (EDLTs). Hole transport in rubrene is described to occur via multiple percolation pathways, where conduction is dominated by transport in the free-site channel at low hole density, and in the trap-site channel at larger hole density.
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- 2014
47. Research on Photovoltaic System with Supper Capacitor Based on Improved MPPT Algorithm
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Sha Sha Shi, Lei Wu, and Jing Hui
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Engineering ,business.industry ,Photovoltaic system ,General Engineering ,Energy storage ,Maximum power point tracking ,Power (physics) ,law.invention ,Capacitor ,Control theory ,law ,Mppt algorithm ,Electronic engineering ,Waveform ,business ,Intensity (heat transfer) - Abstract
The output power of photovoltaic (PV) cells would crucially change due to the intensity of solar irradiation and the environment temperature. For the sake of achieving more efficiency of solar power system, the Maximum Power Point Tracking (MPPT) is highly demanded. This paper focuses on analyzing the implemental principle of MPPT with an improved incremental method under the standard conditions. An algorithm is applied to PV system where supper capacitor is chose as energy storage element. Finally, an experimental prototype was designed to verify the validity of the improved increment method. It provides the contrast experiment waveforms between the improved increment method and increment conductance method. The result of experimental shows the effectiveness of the algorithm.
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- 2013
48. Research on Domain Ontology-Based Concept Similarity Calculation
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Wen Jie Li, Si Liu, and Sha Sha Shi
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Information retrieval ,Correctness ,Computer science ,Similarity heuristic ,General Medicine ,computer.software_genre ,Field (computer science) ,Domain (software engineering) ,Semantic similarity ,Similarity (psychology) ,Ontology ,Data mining ,computer ,Semantic Web - Abstract
Similarity computing of ontological concept has made rapid progress in the field of data mining, information processing and artificial intelligence and becoming one of the hot research field of information technology, particularly the idea of the semantic Web was proposed in 2000, the concept of semantic similarity has gotten more attention, while also facilitating its further development and application in information retrieval. Considering the deficiencies of existing concept similarity algorithm, this paper design the method to reduce the candidate set of domain concept, and put forward a similarity calculation model based on the concept name, instances, properties, and semantic structure of domain ontology. Integrated several main influencing factors, the experiments show the proposed algorithm can express the impact of various factors on the similarity in the calculation concept similarity of domain ontology. By comparing with the traditional similarity method and expertise experience value, the experiment result shows that the effectiveness and correctness of the concept similarity calculation model.
- Published
- 2013
49. Large Magnetoresistance at Room Temperature in Organic Molecular Tunnel Junctions with Nonmagnetic Electrodes
- Author
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Feilong Liu, Darryl L. Smith, Sha Shi, P. Paul Ruden, C. Daniel Frisbie, and Zuoti Xie
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Condensed matter physics ,Magnetoresistance ,Chemistry ,General Engineering ,General Physics and Astronomy ,02 engineering and technology ,Condensed Matter::Mesoscopic Systems and Quantum Hall Effect ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Magnetic field ,Coupling (electronics) ,Molecule ,General Materials Science ,Singlet state ,Triplet state ,0210 nano-technology ,Spin (physics) ,Quantum tunnelling - Abstract
We report room-temperature resistance changes of up to 30% under weak magnetic fields (0.1 T) for molecular tunnel junctions composed of oligophenylene thiol molecules, 1-2 nm in length, sandwiched between gold contacts. The magnetoresistance (MR) is independent of field orientation and the length of the molecule; it appears to be an interface effect. Theoretical analysis suggests that the source of the MR is a two-carrier (two-hole) interaction at the interface, resulting in spin coupling between the tunneling hole and a localized hole at the Au/molecule contact. Such coupling leads to significantly different singlet and triplet transmission barriers at the interface. Even weak magnetic fields impede spin relaxation processes and thus modify the ratio of holes tunneling via the singlet state versus the triplet state, which leads to the large MR. Overall, the experiments and analysis suggest significant opportunities to explore large MR effects in molecular tunnel junctions based on widely available molecules.
- Published
- 2016
50. Neural correlates of 12-h abstinence-induced craving in young adult smokers: a resting-state study
- Author
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Yanyan Guan, Yanzhi Bi, Xiaoqi Lu, Sha Shi, Yangding Li, Yajuan Zhang, Jie Tian, Kai Yuan, Dahua Yu, and Jiadong Cheng
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Male ,medicine.medical_specialty ,Adolescent ,Brain activity and meditation ,Cognitive Neuroscience ,media_common.quotation_subject ,Rest ,Precuneus ,Craving ,Audiology ,behavioral disciplines and activities ,03 medical and health sciences ,Behavioral Neuroscience ,Cellular and Molecular Neuroscience ,Young Adult ,0302 clinical medicine ,mental disorders ,Neural Pathways ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Young adult ,Psychiatry ,Anterior cingulate cortex ,media_common ,Brain Mapping ,Smokers ,Resting state fMRI ,Smoking ,Brain ,Abstinence ,Magnetic Resonance Imaging ,030227 psychiatry ,Psychiatry and Mental health ,medicine.anatomical_structure ,Neurology ,Posterior cingulate ,Neurology (clinical) ,medicine.symptom ,Psychology ,psychological phenomena and processes ,030217 neurology & neurosurgery - Abstract
Studying the neural correlates of craving to smoke in young adulthood is of great importance to improve treatment outcomes in nicotine dependence. Previous nicotine dependence studies mainly focused on the neural substrates of craving elicited by smoking-related cues. More explicit attention to abstinence-induced craving during resting state in nicotine dependence has the potential to yield valuable information about craving, and characterizing this kind of craving is critical for developing effective interventions. Twenty-five young male smokers were enrolled in the present study. A within-subject experiment design was carried out to compare regional homogeneity (ReHo) between 12-h smoking abstinence and smoking satiety conditions during resting state in young adult smokers. Then, the ReHo changes associated with smoking abstinence (compared with satiety) were further examined for correlations with abstinence-induced changes in subjective craving. We found young adult smokers in abstinence state (compared with satiety) had higher ReHo in brain regions in fronto-striatal circuits including bilateral caudate, anterior cingulate cortex (ACC) and bilateral dorsal lateral prefrontal cortex (DLPFC), as well as brain regions in default mode network (DMN) including posterior cingulate cortex (PCC)/precuneus and angular gyrus. Additionally, we found the ReHo changes of the ACC and the bilateral caudate were positively correlated with the changes in craving induced by abstinence (i.e., abstinence minus satiety) in young adult smokers. The present findings improve the understanding of the effects of acute smoking abstinence on spontaneous brain activity and may contribute new insights into the neural mechanism of abstinence-induced craving in nicotine dependence.
- Published
- 2016
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