13 results on '"Seung-Pil Yang"'
Search Results
2. P2‐084: OPTIMIZATION OF A MURINE CNS IDO1 PHARMACOKINETIC‐PHARMACODYNAMIC MODEL USING SYSTEMIC LPS ADMINISTRATION
- Author
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Yanfei Wang, Kurt R. Stover, Mark Reed, Don F. Weaver, Seung-Pil Yang, and Paul M. Stafford
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Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Epidemiology ,business.industry ,Pharmacokinetic pharmacodynamic ,Health Policy ,Medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,Pharmacology ,business - Published
- 2018
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3. Measurement of Width and Step-Height of Photolithographic Product Patterns by Using Digital Holography
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Ju Yeop Shin, Chung Ki Hong, Ik-Hwan Kwon, Sung Hoon Kang, Kyeong Suk Kim, Hyun-Chul Jung, Seung Pil Yang, and Hye Joon Ma
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Materials science ,business.industry ,Semiconductor device fabrication ,Process (computing) ,Magnification ,law.invention ,Optics ,Transmission (telecommunications) ,Mask set ,law ,Wafer ,Photolithography ,business ,Digital holography - Abstract
The semiconductor industry is one of the key industries of Korea, which has continued growing at a steady annual growth rate. Important technology for the semiconductor industry is high integration of devices. This is to increase the memory capacity for unit area, of which key is photolithography. The photolithography refers to a technique for printing the shadow of light lit on the mask surface on to wafer, which is the most important process in a semiconductor manufacturing process. In this study, the width and step-height of wafers patterned through this process were measured to ensure uniformity. The widths and inter-plate heights of the specimens patterned using photolithography were measured using transmissive digital holography. A transmissive digital holographic interferometer was configured, and nine arbitrary points were set on the specimens as measured points. The measurement of each point was compared with the measurements performed using a commercial device called scanning electron microscope (SEM) and Alpha Step. Transmission digital holography requires a short measurement time, which is an advantage compared to other techniques. Furthermore, it uses magnification lenses, allowing the flexibility of changing between high and low magnifications. The test results confirmed that transmissive digital holography is a useful technique for measuring patterns printed using photolithography.
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- 2016
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4. [P1–078]: TARGETING OLIGOMERIC PROTEIN SPECIES WITH SMALL MOLECULES
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Scott C Banfield, Shaolong Zhu, Kunal Keskar, Derek J. Wilson, Erhu Lu, Arun Yadav, Marcia Taylor, Seung-Pil Yang, Donald F. Weaver, Christopher J. Barden, Yanfei Wang, Bin Deng, Braden Sweeting, Fan Wu, Luhze Pan, Mark Reed, and Kurt R. Stover
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Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Biochemistry ,Epidemiology ,Health Policy ,Protein species ,Neurology (clinical) ,Geriatrics and Gerontology ,Small molecule - Published
- 2017
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5. Deformation Characteristics Analysis of 3-Unit Fixed Partial Dentures by Using Electronic Speckle Pattern Interferometry
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Seung-Pil Yang, Hee-Jin Kim, Hoo-Won Kang, and Chul-Min Lee
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Engineering drawing ,Universal testing machine ,Speckle pattern ,Materials science ,Electronic speckle pattern interferometry ,visual_art ,Fracture (geology) ,visual_art.visual_art_medium ,Ceramic ,Composite material ,Deformation (meteorology) ,Piezoelectricity ,Displacement (vector) - Abstract
Purpose: The deformation characteristics induced by non-destructive stresses using piezoelectric transducer(PZT) were analyzed for 3-unit fixed partial dentures manufactured PFM, Everest(CAD/CAM) and Zirkonzahn(copy milling, MAD/MAM) by electron speckle pattern interferometery(ESPI). Methods: The ESPI analysis after loading the restoration with PZT by applying electric voltage of 900mV at the points of 10 mm above the base of the prostheses. Results: PFM and All-Ceramic Everest prostheses showed about 0.1 while that of All- Ceramic Zirkonzahn prostheses showed 0.085 , demonstrating that Zirkonzahn displaced less. For PFM and All-Ceramic Zirkonzahn prostheses, the displacements were large at just below the loading point, while generalize displacement was shown over the loading point and weak connector areas for All-Ceramic Everest prostheses. Conclusion: We could find that the deformation characteristics induced by non-destructive stresses using PZT analyzed by ESPI were similar to the fracture strengths evaluated using universal testing machine.
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- 2013
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6. P1‐078: Discovery of Small Molecule Dual Inhibitors of Both Abeta and TAU Oligomerization
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Scott C Banfield, Anandi Bhattacharya, Erhu Lu, Christopher J. Barden, Fan Wu, Donald F. Weaver, Marcy Taylor, Braden Sweeting, Arun Yadav, Yanfei Wang, Seung-Pil Yang, and Mark Reed
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Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Epidemiology ,Chemistry ,Health Policy ,Biophysics ,Neurology (clinical) ,Geriatrics and Gerontology ,DUAL (cognitive architecture) ,Small molecule - Published
- 2016
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7. P4‐226: Quantification of Tau Oligomers From Mouse Brain Tissue
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Braden Sweeting, Anandi Bhattacharya, Fan Wu, Christopher J. Barden, Arun Yadav, Erhu Lu, Seung-Pil Yang, Marcy Taylor, Donald F. Weaver, Mark Reed, and Yanfei Wang
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Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Pathology ,medicine.medical_specialty ,Developmental Neuroscience ,Epidemiology ,Health Policy ,Diabetes mellitus ,medicine ,Neurology (clinical) ,Brain tissue ,Geriatrics and Gerontology ,medicine.disease - Published
- 2016
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8. Dynamics of a Heparin-Binding Domain of VEGF165 Complexed with Its Inhibitor Triamterene
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Sung-Ah Lee, Ki-Woong Jeong, Chi-Bom Chae, Seung-Pil Yang, Yangmee Kim, Dong-Il Kang, Jee-Young Lee, and Hyunsook Ko
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Models, Molecular ,Vascular Endothelial Growth Factor A ,Binding Sites ,Heparin ,Protein Conformation ,Chemistry ,Angiogenesis ,Hydrogen Bonding ,Biochemistry ,Vascular endothelial growth factor ,chemistry.chemical_compound ,Protein structure ,Docking (molecular) ,medicine ,Humans ,Senile plaques ,Binding site ,Triamterene ,Pteridine ,medicine.drug ,Binding domain - Abstract
Vascular endothelial growth factor (VEGF), which has neurotrophic and neuroprotective effects in addition to its major role in angiogenesis, interacts with Aβ and accumulates in the senile plaques of Alzheimer's disease (AD) patients' brains. It is known that Aβ binds to the heparin-binding domain (HBD) of the 165-amino acid VEGF variant, VEGF(165). In this study, we showed that triamterene (Trm) inhibits VEGF--Aβ interaction without affecting other biological activities of VEGF or Aβ. We investigated the importance of structural and dynamic features of HBD for its molecular-recognition processes. The binding model of HBD and Trm was constructed based on measurements of chemical shift changes and docking study. The results showed that the loop region (S11-L17) and F18 at the beginning of the first β-sheet in the HBD constitute the inhibitor binding site. The N1 atom of pteridine ring of Trm forms hydrogen bonding with backbone amide proton of R13, and the phenyl ring took part in a hydrophobic interaction with the aromatic ring of F18. To investigate the functional importance of the inherent structural flexibility of the HBD in VEGF, the dynamic properties of free HBD and HBD--Trm complex were assessed by measuring spin relaxation rates, and the backbone dynamics were investigated by model-free analysis. The residues in the disordered loop region of the N-terminus exhibited conformational exchanges in free HBD, and flexibility of this loop region decreased dramatically upon binding to Trm, suggesting that Aβ as well as inhibitor may recognize these unique dynamic features of the HBD. Furthermore, C-terminal residues continued to exhibit slow conformational motions, even in the HBD--Trm complex, implying that these motions at the C-terminus of the HBD might be important for interactions with heparin molecules. The flexibility of HBD demonstrated here should be essential for VEGF function and interaction with other protein partners.
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- 2011
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9. APH1 Polar Transmembrane Residues Regulate the Assembly and Activity of Presenilin Complexes
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Raphaëlle Pardossi-Piquard, Tong Li, Seung Pil Yang, Gerold Schmitt-Ulms, Yongjun Gu, Frédéric Checler, Peter St George-Hyslop, Paul E. Fraser, Fusheng Chen, Jean Sevalle, Philip C. Wong, Christopher Bohm, Soshi Kanemoto, Centre for Research in Neurodegenerative Diseases, University of Toronto, Institut de pharmacologie moléculaire et cellulaire (IPMC), Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS), Departments of Neuroscience and Pathology, Johns Hopkins University School of Medicine [Baltimore], Department of Laboratory Medicine and Pathobiology (LMP), Department of Medicine (Division of Neurology), University Health Network, Department of Clinical Neurosciences [Cambridge], University of Cambridge [UK] (CAM), Department of Medical Biophysics (MBP), and Canadian Institutes of Health Research, Howard Hughes Medical Institute, Alzheimer Society of Ontario, The Ontario Research and Development Challenge Fund and the Canada Foundation for Innovation, the Weston and Garfield Foundation, and Fondation pour la Recherche Médicale, Conseil Général des Alpes Maritimes
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MESH: Amino Acid Sequence ,MESH: Aspartic Acid ,Biochemistry ,Conserved sequence ,Mice ,MESH: Protein Structure, Tertiary ,MESH: Histidine ,0302 clinical medicine ,MESH: Animals ,APH-1 ,Peptide sequence ,Cells, Cultured ,Conserved Sequence ,0303 health sciences ,MESH: Conserved Sequence ,Presenilins ,MESH: Amino Acid Substitution ,MESH: Presenilins ,Transmembrane protein ,MESH: Mutagenesis, Site-Directed ,Protein Structure and Folding ,[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC] ,MESH: Membrane Proteins ,MESH: Cells, Cultured ,MESH: Peptide Hydrolases ,Molecular Sequence Data ,Nicastrin ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,Biology ,Transfection ,Catalysis ,Presenilin ,03 medical and health sciences ,Endopeptidases ,mental disorders ,Animals ,Humans ,Histidine ,Amino Acid Sequence ,MESH: Mice ,Molecular Biology ,030304 developmental biology ,Aspartic Acid ,MESH: Humans ,MESH: Molecular Sequence Data ,MESH: Transfection ,Membrane Proteins ,Cell Biology ,Fibroblasts ,MESH: Multiprotein Complexes ,MESH: Catalysis ,Protein Structure, Tertiary ,Amino Acid Substitution ,MESH: Amyloid Precursor Protein Secretases ,MESH: Fibroblasts ,Multiprotein Complexes ,Mutagenesis, Site-Directed ,biology.protein ,Biophysics ,Amyloid Precursor Protein Secretases ,Amyloid precursor protein secretase ,030217 neurology & neurosurgery ,Peptide Hydrolases - Abstract
International audience; Complexes involved in the gamma/epsilon-secretase-regulated intramembranous proteolysis of substrates such as the amyloid-beta precursor protein are composed primarily of presenilin (PS1 or PS2), nicastrin, anterior pharynx defective-1 (APH1), and PEN2. The presenilin aspartyl residues form the catalytic site, and similar potentially functional polar transmembrane residues in APH1 have been identified. Substitution of charged (E84A, R87A) or polar (Q83A) residues in TM3 had no effect on complex assembly or activity. In contrast, changes to either of two highly conserved histidines (H171A, H197A) located in TM5 and TM6 negatively affected PS1 cleavage and altered binding to other secretase components, resulting in decreased amyloid generating activity. Charge replacement with His-to-Lys substitutions rescued nicastrin maturation and PS1 endoproteolysis leading to assembly of the formation of structurally normal but proteolytically inactive gamma-secretase complexes. Substitution with a negatively charged side chain (His-to-Asp) or altering the structural location of the histidines also disrupted gamma-secretase binding and abolished functionality of APH1. These results suggest that the conserved transmembrane histidine residues contribute to APH1 function and can affect presenilin catalytic activity.
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- 2009
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10. P1‐307: Inhibition of protein misfolding by optimization of small molecules targeted to both beta‐amyloid and tau peptides
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Christopher J. Barden, Mark Reed, Scott C Banfield, Arun Yadav, Braden Sweeting, Erhu Lu, Donald F. Weaver, Marcia Taylor, Seung-Pil Yang, Fan Wu, and Yanfei Wang
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Amyloid ,Epidemiology ,Chemistry ,Health Policy ,Molecular biology ,Small molecule ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Biochemistry ,Protein folding ,Neurology (clinical) ,Geriatrics and Gerontology ,Beta (finance) - Published
- 2015
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11. Specific interaction of VEGF165 with beta-amyloid, and its protective effect on beta-amyloid-induced neurotoxicity
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Byoung-Oh Kwon, Chi-Bom Chae, Yong Song Gho, and Seung-Pil Yang
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Vascular Endothelial Growth Factor A ,Time Factors ,Amyloid ,Cell Survival ,Plasma protein binding ,Fibroblast growth factor ,PC12 Cells ,Biochemistry ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,mental disorders ,medicine ,Animals ,Humans ,Protein Isoforms ,Senile plaques ,Binding site ,Midkine ,Amyloid beta-Peptides ,Binding Sites ,Dose-Response Relationship, Drug ,Sequence Homology, Amino Acid ,biology ,Neurotoxicity ,Surface Plasmon Resonance ,medicine.disease ,Molecular biology ,Peptide Fragments ,Recombinant Proteins ,Rats ,nervous system diseases ,Vascular endothelial growth factor ,chemistry ,Immunology ,biology.protein ,Cytokines ,Carrier Proteins ,Protein Binding - Abstract
beta-amyloid (Abeta) is a major component of senile plaques that is commonly found in the brain of Alzheimer's disease (AD) patient. In the previous report, we showed that an important angiogenic factor, vascular endothelial growth factor (VEGF) interacts with Abeta and is accumulated in the senile plaques of AD patients' brains. Here we show that Abeta interacts with VEGF(165) isoform, but not with VEGF(121). Abeta binds to the heparin-binding domain (HBD) of VEGF(165) with similar affinity as that of intact VEGF(165). Abeta binds mostly to the C-terminal subdomain of HBD, but with greatly reduced affinity than HBD. Therefore, the full length of HBD appears to be required for maximal binding of Abeta. Although Abeta binds to heparin-binding sequence of VEGF, it does not bind to other heparin-binding growth factors except midkine. Thus it seems that Abeta recognizes unique structural features of VEGF HBD. VEGF(165) prevents aggregation of Abeta through its HBD. We localized the core VEGF binding site of Abeta at around 26-35 region of the peptide. VEGF(165) and HBD protect PC12 cells from the Abeta-induced cytotoxicity. The mechanism of protection appears to be inhibition of both Abeta-induced formation of reactive oxygen species and Abeta aggregation.
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- 2005
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12. P4‐208: CHARACTERIZATION AND OPTIMIZATION OF NEW CHEMICAL ENTITY ANTI‐PROTEIN MISFOLDING AGENTS
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Marcia Taylor, Donald F. Weaver, Scott C Banfield, Seung-Pil Yang, Erhu Lu, Mark Reed, Braden Sweeting, Yanfei Wang, Christopher J. Barden, Pamela Gallant, and Arun Yadav
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Alpha-synuclein ,Amyloid ,Epidemiology ,Chemistry ,Health Policy ,Molecular biology ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,Developmental Neuroscience ,In vivo ,Biotinylation ,mental disorders ,Thioflavin ,Protein folding ,Neurology (clinical) ,Geriatrics and Gerontology ,Beta (finance) ,Ex vivo - Abstract
Background and Hypothesis: Both beta amyloid and tau produce neurotoxic protein misfolding co-conspirators most often implicated in the molecular causation of AD. Moreover, since the clinical presentation of AD is heterogeneous (e.g. extrapyramidal symptoms in some people with AD and dementia symptoms in some people with PD), the clinical overlap amongst neurodegenerative disorders implies that AD is more of a syndrome than a disease and that the suppression of other aberrantly misfolded protein (e.g. alpha synuclein) may afford additional therapeutic benefits. Accordingly, we are seeking to design and develop brain-penetrable small molecule new chemical entities as anti-protein misfolding agents targeting three proteins: beta amyloid 40 and 42; tau and alpha synuclein. Based upon extensive in silico modeling, a family of novel compounds has been identified. A representative compound is TRV101. Methods: Efficacy of TRV101 was measured in a variety of in vitro assays including Thioflavin T beta amyloid aggregation, Thioflavin S tau aggregation, and biotin-beta amyloid 42 oligomerization. TRV101 was incubated with full length tau and the resultant solution was examined by electron microscopy. Additionally, data was collected on blood brain penetrance, protein binding, and longevity in mouse liver microsomes. Results: TRV101 showed anti-aggregation activity against both beta amyloid and tau. TRV has drug like properties, has high brain penetrance, and is stable in various ADME tests. Conclusion: We have developed a new class of compounds capable of inhibiting aggregation of both beta amyloid and tau proteins. Our small molecules are pharmacokinetically stable and are able to reach the target tissue. Our compounds are currently being tested in animal models of both beta amyloid and tau pathologies. In Vivo PK (Mouse, p.o.) AUC (brain) = 8692 hr*ng/ mL T1/2 = 5.4h Cmax = 1217 ng/mL (brain) Bioavailability = 78.3 % B/P = 1 MLM T1/2 > 60 min Clint = 0.008 mL/min/mg HLM T1/2 = 57 min Clint = 0.024 mL/min/mg Physical Chemistry Properties LogD = 3.15 MW: 446 g/mol tPSA = 60.6 Protein binding 98.9 % (mouse) 97.6 % (human) 0 0.02 0.04 0.06 0.08 0.1 0.12 0.14 0.16 0.18 0.2 A b s o rb a n c e ( 4 5 0 n m ) In vitro assays Thioflavin S aggregation assay – Thioflavin S fluoresces when in the presence of aggregated tau. The reaction is initiated by addition of heparin and the reaction is followed by fluorescence until the signal change plateaus. Test compounds are measured by change in fluorescence compared to a vehicle control. TRV101 inhibits tau-441 aggregation with an IC50 of 2.5μM Oligomer formation assay – Biotinylated amyloid-β is allowed to self-associate in the presence of compound, vehicle, and 0.1% Tween20. The reaction is stopped by addition of 0.1% Tween-20 and the sample is applied to a neutravidin ELISA plate. Oligomers are detected by addition of streptavidin-HRP, which will only detect unbound biotin label, i.e., oligomers. TRV101 inhibits biotinylated amyloidβ (1-40) oligomerization with an IC50 of 5μM Animal models APP/PS1 (amyloid-β model), n=13 The mice were dosed at 30mg/kg (p.o., qd) commencing at 6 weeks of age with behavioral testing (2d-RAWM and fear conditioning) at ~3.5 months of age followed by ex vivo LTP analysis performed at the CA3/CA1 synapse in the hippocampus.
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- 2014
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13. P3‐376: Gene expression profiling in a transgenic mouse model of Alzheimer's disease
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Christopher Bohm, Raphaëlle Pardossi-Piquard, Yosuke Wakutani, Fusheng Chen, Edwin Yip, Seung-Pil Yang, David Westaway, Peter St. George Hyslop, Paul E. Fraser, Ekaterina Rogaeva, Tetsuro Murakami, and Yongjun Gu
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Genetically modified mouse ,Gene expression profiling ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Epidemiology ,Health Policy ,Neurology (clinical) ,Disease ,Geriatrics and Gerontology ,Biology ,Molecular biology - Published
- 2008
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