11,649 results on '"Protein Tyrosine Phosphatase"'
Search Results
2. LncRNA PTPRG‐AS1 facilitates glycolysis and stemness properties of esophageal squamous cell carcinoma cells through miR‐599/PDK1 axis
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Renquan Zhang, Wei He, Ningning Kang, Yunlong Huang, Ziao Wang, Long Yao, Wei Ge, and Kaiming Wu
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Pyruvate dehydrogenase kinase ,Esophageal Neoplasms ,Hepatology ,Oncogene ,Cell growth ,business.industry ,Gastroenterology ,Pyruvate Dehydrogenase Acetyl-Transferring Kinase ,RNA ,Protein tyrosine phosphatase ,Phosphoric Monoester Hydrolases ,digestive system diseases ,MicroRNAs ,Apoptosis ,Cancer cell ,Cancer research ,Humans ,Gene silencing ,Medicine ,RNA, Long Noncoding ,Esophageal Squamous Cell Carcinoma ,business ,Glycolysis ,Signal Transduction - Abstract
Esophageal squamous cell carcinoma (ESCC) is the most significant subtype of esophageal cancer featured with high occurrence. Long noncoding RNAs (lncRNAs) have been proved to modulate the biological properties of cancer cells, including cell proliferation, invasion, migration, and apoptosis. LncRNA protein tyrosine phosphatase receptor type G-antisense RNA 1 (PTPRG-AS1) has been reported to play as an oncogene in diverse cancers. However, the detailed function PTPRG-AS1 may exert in ESCC is unclear.PTPRG-AS1 expression in ESCC cells was investigated via quantitative reverse transcription real-time polymerase chain reaction (RT-qPCR). The effects of PTPRG-AS1 on ESCC cell proliferation, migration, glycolysis, and stemness were verified through functional assays. Mechanism assays including RIP assay, RNA pull down assay, and luciferase reporter assays were performed to verify the molecular mechanism of PTPRG-AS1.PTPRG-AS1 silencing hindered the proliferation, migration, glycolysis and stemness of ESCC cells. PTPRG-AS1 regulated pyruvate dehydrogenase kinase 1 (PDK1) expression via sponging miR-599. The PTPRG-AS1/miR-599/PDK1 axis was further verified to aggravate the progression of ESCC cells.PTPRG-AS1 sponged miR-599 to up-regulate PDK1 expression, thereby promoting the proliferation and migration as well as glycolysis and stemness properties of ESCC cells.
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- 2022
3. Protein tyrosine phosphatase receptor-ζ1 deletion triggers defective heart morphogenesis in mice and zebrafish
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Grigorios Tsigkas, Dimitris Beis, Constantinos H. Davos, Emmanouil Athanasiadis, Evangelia Papadimitriou, Sophia Nikou, Despoina Ntenekou, Stamatiki Katraki-Pavlou, Pinelopi Kastana, Aimilia Varela, Gonzalo Herradón, Constantinos M. Mikelis, Dimitris Bousis, and Eleni Papadaki
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tyrosine phosphatase ,Cell type ,Heart morphogenesis ,Physiology ,Angiogenesis ,Organogenesis ,Protein tyrosine phosphatase ,Mice ,angiogenesis ,Physiology (medical) ,Animals ,Receptor ,Zebrafish ,cardiac morphogenesis ,biology ,Heart development ,Receptor-Like Protein Tyrosine Phosphatases, Class 5 ,Myocardium ,cardiogenesis ,Heart ,Zebrafish Proteins ,zebrafish ,biology.organism_classification ,Cell biology ,PTPRZ1 ,Cardiology and Cardiovascular Medicine ,Gene Deletion ,Research Article - Abstract
Protein tyrosine phosphatase receptor-ζ1 (PTPRZ1) is a transmembrane tyrosine phosphatase receptor highly expressed in embryonic stem cells. In the present work, gene expression analyses of Ptprz1−/− and Ptprz1+/+ mice endothelial cells and hearts pointed to an unidentified role of PTPRZ1 in heart development through the regulation of heart-specific transcription factor genes. Echocardiography analysis in mice identified that both systolic and diastolic functions are affected in Ptprz1−/− compared with Ptprz1+/+ hearts, based on a dilated left ventricular (LV) cavity, decreased ejection fraction and fraction shortening, and increased angiogenesis in Ptprz1−/− hearts, with no signs of cardiac hypertrophy. A zebrafish ptprz1−/− knockout was also generated and exhibited misregulated expression of developmental cardiac markers, bradycardia, and defective heart morphogenesis characterized by enlarged ventricles and defected contractility. A selective PTPRZ1 tyrosine phosphatase inhibitor affected zebrafish heart development and function in a way like what is observed in the ptprz1−/− zebrafish. The same inhibitor had no effect in the function of the adult zebrafish heart, suggesting that PTPRZ1 is not important for the adult heart function, in line with data from the human cell atlas showing very low to negligible PTPRZ1 expression in the adult human heart. However, in line with the animal models, Ptprz1 was expressed in many different cell types in the human fetal heart, such as valvar, fibroblast-like, cardiomyocytes, and endothelial cells. Collectively, these data suggest that PTPRZ1 regulates cardiac morphogenesis in a way that subsequently affects heart function and warrant further studies for the involvement of PTPRZ1 in idiopathic congenital cardiac pathologies. NEW & NOTEWORTHY Protein tyrosine phosphatase receptor ζ1 (PTPRZ1) is expressed in fetal but not adult heart and seems to affect heart development. In both mouse and zebrafish animal models, loss of PTPRZ1 results in dilated left ventricle cavity, decreased ejection fraction, and fraction shortening, with no signs of cardiac hypertrophy. PTPRZ1 also seems to be involved in atrioventricular canal specification, outflow tract morphogenesis, and heart angiogenesis. These results suggest that PTPRZ1 plays a role in heart development and support the hypothesis that it may be involved in congenital cardiac pathologies.
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- 2022
4. Loss of protein tyrosine phosphatase non-receptor type 2 reduces IL-4-driven alternative macrophage activation
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Ali Shawki, Declan F. McCole, Sarah D Bobardt, Jiang Li, Marianne R. Spalinger, Pritha Chatterjee, Meera G. Nair, Anica Sayoc-Becerra, Meli’sa S. Crawford, and Alina N. Santos
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THP-1 Cells ,Knockout ,medicine.medical_treatment ,Receptor expression ,Immunology ,Inflammation ,Protein tyrosine phosphatase ,Biology ,Medical and Health Sciences ,Article ,Vaccine Related ,Mice ,Th2 Cells ,Immune system ,Biodefense ,medicine ,Animals ,Humans ,2.1 Biological and endogenous factors ,Immunology and Allergy ,Macrophage ,Aetiology ,Lung ,Non-Receptor Type 2 ,Interleukin 4 ,Strongylida Infections ,Mice, Knockout ,Protein Tyrosine Phosphatase, Non-Receptor Type 2 ,Innate immune system ,Macrophages ,Prevention ,Inflammatory and immune system ,Cell Differentiation ,Th1 Cells ,Biological Sciences ,Cell biology ,Infectious Diseases ,Emerging Infectious Diseases ,Cytokine ,Gene Knockdown Techniques ,Nippostrongylus ,Interleukin-4 ,Protein Tyrosine Phosphatase ,medicine.symptom - Abstract
Macrophages are a heterogeneous population of innate immune cells that are often divided into two major subsets: classically activated, typically pro-inflammatory (M1) macrophages that mediate host defense, and alternatively activated, tolerance-inducing (M2) macrophages that exert homeostatic and tissue-regenerative functions. Disturbed macrophage function/differentiation results either in inadequate, excessive immune activation or in a failure to induce efficient protective immune responses against pathogens. Loss-of-function variants in protein tyrosine phosphatase non-receptor type 2 (PTPN2) are associated with chronic inflammatory disorders, but the effect of macrophage-intrinsic PTPN2 loss is still poorly understood. Here we report that PTPN2-deficient macrophages fail to acquire an alternatively activated/M2 phenotype. This was the consequence of reduced IL-6 receptor expression and a failure to induce IL-4 receptor in response to IL-6, resulting in an inability to respond to the key M2-inducing cytokine IL-4. Ultimately, failure to adequately respond to IL-6 and IL-4 resulted in increased levels of M1 macrophage marker expression in vitro and exacerbated lung inflammation upon infection with Nippostrongylus brasiliensis in vivo. These results demonstrate that PTPN2 loss interferes with the ability of macrophages to adequately respond to inflammatory stimuli and might explain the increased susceptibility of PTPN2 loss-of-function carriers to developing inflammatory diseases.
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- 2022
5. PTPN2 regulates bacterial clearance in a mouse model of enteropathogenic and enterohemorrhagic E. coli infection
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Marianne R. Spalinger, Vinicius Canale, Anica Becerra, Ali Shawki, Meli’sa Crawford, Alina N. Santos, Pritha Chatterjee, Jiang Li, Meera G. Nair, and Declan F. McCole
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Vaccine Related ,Mice ,Bacterial infections ,Biodefense ,Animals ,Humans ,2.2 Factors relating to the physical environment ,2.1 Biological and endogenous factors ,Aetiology ,Non-Receptor Type 2 ,Escherichia coli Infections ,Inflammation ,Macrophages ,Prevention ,Enterobacteriaceae Infections ,Gastroenterology ,Epithelial Cells ,General Medicine ,Cellular immune response ,Foodborne Illness ,Emerging Infectious Diseases ,Infectious Diseases ,Enterohemorrhagic Escherichia coli ,Protein Tyrosine Phosphatase ,Digestive Diseases ,Infection - Abstract
Macrophages intimately interact with intestinal epithelial cells, but the consequences of defective macrophage-epithelial cell interactions for protection against enteric pathogens are poorly understood. Here, we show that in mice with a deletion in protein tyrosine phosphatase nonreceptor type 2 (PTPN2) in macrophages, infection with Citrobacter rodentium, a model of enteropathogenic and enterohemorrhagic E. coli infection in humans, promoted a strong type 1/IL-22-driven immune response, culminating in accelerated disease but also faster clearance of the pathogen. In contrast, deletion of PTPN2 specifically in epithelial cells rendered the epithelium unable to upregulate antimicrobial peptides and consequently resulted in a failure to eliminate the infection. The ability of PTPN2-deficient macrophages to induce faster recovery from C. rodentium was dependent on macrophage-intrinsic IL-22 production, which was highly increased in macrophages deficient in PTPN2. Our findings demonstrate the importance of macrophage-mediated factors, and especially macrophage-derived IL-22, for the induction of protective immune responses in the intestinal epithelium, and show that normal PTPN2 expression in the epithelium is crucial to allow for protection against enterohemorrhagic E. coli and other intestinal pathogens.
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- 2023
6. PTPN2 Is a Critical Regulator of Ileal Paneth Cell Viability and Function in Mice
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Vinicius Canale, Marianne R. Spalinger, Rocio Alvarez, Anica Sayoc-Becerra, Golshid Sanati, Salomon Manz, Pritha Chatterjee, Alina N. Santos, Hillmin Lei, Sharon Jahng, Timothy Chu, Ali Shawki, Elaine Hanson, Lars Eckmann, André J. Ouellette, and Declan F. McCole
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Paneth Cells ,Hepatology ,Cell Survival ,Knockout ,Inflammatory Bowel Disease ,Lysozyme ,Gastroenterology ,Inflammatory Bowel Diseases ,Oral and gastrointestinal ,Mice ,Ileum ,Genetics ,Animals ,Intestinal Epithelial Cells ,2.1 Biological and endogenous factors ,TCPTP ,Protein Tyrosine Phosphatase ,Microbiome ,Aetiology ,Digestive Diseases ,Non-Receptor Type 2 ,Antimicrobial Peptides - Abstract
Background & aimsLoss-of-function variants in the PTPN2 gene are associated with increased risk of inflammatory bowel disease. We recently showed that Ptpn2 is critical for intestinal epithelial cell (IEC) barrier maintenance, IEC-macrophage communication, and modulation of the gut microbiome in mice, restricting expansion of a small intestinal pathobiont associated with inflammatory bowel disease. Here, we aimed to identify how Ptpn2 loss affects ileal IEC subtypes and their function invivo.MethodsConstitutive Ptpn2 wild-type, heterozygous, and knockout (KO) mice, as well as mice with inducible deletion of Ptpn2 in IECs, were used in the study. Investigation was performed using imaging techniques, flow cytometry, enteroid culture, and analysis of gene and protein levels of IEC markers.ResultsPartial transcriptome analysis showed that expression of Paneth cell-associated antimicrobial peptides Lyz1, Pla2g2a, and Defa6 was down-regulated markedly in Ptpn2-KO mice compared with wild-type and heterozygous. In parallel, Paneth cell numbers were reduced, their endoplasmic reticulum architecture was disrupted, and the endoplasmic reticulum stress protein, C/EBP-homologous protein (CHOP), was increased in Ptpn2-KO mice. Despite reduced Paneth cell number, flow cytometry showed increased expression of the Paneth cell-stimulatory cytokines interleukin 22 and interferon γ+ in CD4+ T cells isolated from Ptpn2-KO ileum. Key findings in constitutive Ptpn2-KO mice were confirmed in epithelium-specific Ptpn2ΔIEC mice, which also showed impaired lysozyme protein levels in Paneth cells compared with Ptpn2fl/fl control mice.ConclusionsConstitutive Ptpn2 deficiency affects Paneth cell viability and compromises Paneth cell-specific antimicrobial peptide production. The observed effects may contribute to the increased susceptibility to intestinal infection and dysbiosis in these mice.
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- 2023
7. Protein tyrosine phosphatase receptor type O (PTPRO) knockdown enhances the proliferative, invasive and angiogenic activities of trophoblast cells by suppressing ER resident protein 44 (ERp44) expression in preeclampsia
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Xiaoxia Qiu, Yang Yang, and Fang Wang
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Bioengineering ,Protein tyrosine phosphatase ,Applied Microbiology and Biotechnology ,Cell Line ,Flow cytometry ,preeclampsia ,Plasmid ,Pre-Eclampsia ,Downregulation and upregulation ,Pregnancy ,Human Umbilical Vein Endothelial Cells ,medicine ,Humans ,ERp44 ,PTPRO ,Cell Proliferation ,Tube formation ,Gene knockdown ,Neovascularization, Pathologic ,medicine.diagnostic_test ,Chemistry ,Receptor-Like Protein Tyrosine Phosphatases, Class 3 ,Membrane Proteins ,Trophoblast ,General Medicine ,Transfection ,trophoblast cells ,Trophoblasts ,Cell biology ,medicine.anatomical_structure ,Gene Expression Regulation ,Gene Knockdown Techniques ,embryonic structures ,Female ,TP248.13-248.65 ,Research Article ,Research Paper ,Molecular Chaperones ,Biotechnology - Abstract
Preeclampsia (PE), a pregnancy-specific syndrome, is the primary cause of maternal mortality. This work was designed to investigate the specific functions of PTPRO/ ERp44 in the biological behaviors of trophoblast cells and elucidate the underlying molecular mechanism. Constructed siRNA-PTPRO and ERp44 overexpression plasmids were transfected into HTR-8/SVneo and JEG-3 cells for further functional experiments. Subsequently, the proliferation and invasion of trophoblast cells were identified by performing CCK-8, flow cytometry and transwell assay. In addition, tube formation assay was employed to estimate the angiogenic ability of HUVECs incubated with the conditioned media (CM) of HTR-8/SVneo or JEG-3 cells. Importantly, the interaction between PTPRO and ERp44 was analyzed through Co-IP. In the current investigation, it was discovered that downregulation of PTPRO notably facilitated the proliferation and invasion of trophoblast cells and induced a stronger in vitro angiogenesis. Moreover, PTPRO interacted with ERp44 to regulate ERp44 expression. ERp44 overexpression suppressed the proliferative, invasive and angiogenic activities of trophoblast cells. As a result, functions of PTPRO knockdown in the biological behaviors of trophoblast cells were partially abrogated upon elevation of ERp44. To sum up, this current research systematically evidenced that PTPRO could regulate the biological behaviors of trophoblast cells by modulating ERp44. Findings may contribute to a novel therapeutic strategy for PE.
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- 2021
8. Osteosarcoma cell proliferation suppression via SHP-2-mediated inactivation of the JAK/STAT3 pathway by tubocapsenolide A
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Jian-Guang Luo, Si-Bei Wang, Chen Chen, Dong-Rong Zhu, Hao Zhang, Xiao-Qin Liu, Ling-Yi Kong, and Jiang-Min Zhu
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STAT3 Transcription Factor ,Phosphatase ,Protein tyrosine phosphatase ,Article ,Stat3 Signaling Pathway ,Cell Line, Tumor ,Humans ,JAK/STAT3 ,STAT3 ,ComputingMethodologies_COMPUTERGRAPHICS ,Cell Proliferation ,Janus Kinases ,Osteosarcoma ,Multidisciplinary ,biology ,Cell growth ,Chemistry ,Protein Tyrosine Phosphatase, Non-Receptor Type 6 ,Cell cycle ,Xenograft Model Antitumor Assays ,Tubocapsenolide A ,SHP-2 ,STAT protein ,biology.protein ,Cancer research ,Protein Tyrosine Phosphatases ,Janus kinase - Abstract
Graphical abstract, Introduction Previously, we have reported a withanolide-type steroid, named tubocapsenolide A (TA), which shows potent anti-proliferative activity in several cancer cell lines. However, its inhibitory effect on the Janus kinase/signal transducer and activator of transcription 3 (JAK/STAT3) pathway and therapeutic potential on osteosarcoma have not been reported. Objectives In the present study, we aimed to investigate the effect and molecular mechanism of TA in osteosarcoma. Methods The biological functions of TA in U2OS cells were investigated using colony formation, 5-ethynyl-20-deoxyuridine (EDU) staining, and cell cycle/apoptosis assays. The interaction between TA and Src homology 2 phosphatase 2 (SHP-2) was detected by enzyme activity and validated by target-identification methods such as drug affinity responsive target stability (DARTS), cellular thermal shift assay (CETSA), and biolayer interferometry (BLI). The in vivo anti-tumor efficacy of TA was analyzed in the xenograft tumor model. Western blotting analysis was performed to detect the protein expression levels. Results TA exhibited antitumor activity against osteosarcoma both in vitro and in vivo by regulating the JAK/STAT3 signaling pathway. Mechanically, TA interacted with SHP-2 directly and activated its phosphatase activity. Importantly, protein tyrosine phosphatase (PTP) inhibitor, SHP-2 inhibitor, and SHP-2 siRNA could reverse the inhibitory effect of TA on the JAK/STAT3 signaling pathway and restored the TA-induced cell death. Conclusion TA activated the phosphatase activity of SHP-2, which resulted in the inhibition of the JAK/STAT3 pathway and contributed to the antitumor efficacy of TA. Collectively, these findings suggested that TA could serve as a novel therapeutic agent for the treatment of osteosarcoma.
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- 2021
9. BMI1 promotes spermatogonia proliferation through epigenetic repression of Ptprm
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Boxin Xue, Xiuliang Dai, Bo Zheng, Cong Shen, Jinfu Xu, Meng Lin, Xiaoyan Huang, Yue Ding, Hui Zhou, and Ke Zhang
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endocrine system ,Gene knockdown ,urogenital system ,Biophysics ,macromolecular substances ,Cell Biology ,Protein tyrosine phosphatase ,Biology ,Biochemistry ,Chromatin remodeling ,Cell biology ,PTPRM ,BMI1 ,Epigenetic Repression ,Gene silencing ,Epigenetics ,Molecular Biology - Abstract
Spermatogonia are accountable for spermatogenesis and male fertility, but the underlying mechanisms involved in spermatogonia maintenance are not clear. B lymphoma Mo-MLV insertion region 1 (BMI1) is a key component of epigenetic silencers. BMI1 is essential for stem-cell maintenance. Here, we attempted to uncover the role of BMI1 in spermatogonia maintenance using a mouse spermatogonia cell line (GC-1) and Bmi1-knockout (KO) mouse model. We showed that BMI1 promoted the proliferation and inhibited apoptosis of GC-1 cells. Mechanistically, we present in vitro and in vivo evidence to show that BMI1 binds to the promoter region of the Protein tyrosine phosphatase receptor type M (PTPRM) gene, thereby driving chromatin remodeling and gene silencing. Knockdown of Ptprm expression significantly improved spermatogonia proliferation in BMI1-deficient GC-1 cells. Collectively, our data show, for the first time, an epigenetic mechanism involving in BMI1-mediated gene silencing in spermatogonia maintenance, and provide potential targets for the treatment of male infertility.
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- 2021
10. Research Progress of Protein Tyrosine Phosphatase Receptor-Type O in Hepatocellular Carcinoma
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Xinke Xie, Ye Qin, and Xiangzhe Yang
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Chemistry ,Hepatocellular carcinoma ,Cancer research ,medicine ,General Medicine ,Protein tyrosine phosphatase ,Receptor type ,medicine.disease - Abstract
Hepatocellular carcinoma (HCC) is one of the most common malignant tumors in the world with a high incidence and has become one of the most malignant cancers worldwide. Its clinical treatment mainly includes surgical intervention, chemotherapy, and immunotherapy, with poor curative effect and prognosis. In recent years, with the development of basic research, it has been revealed that protein tyrosine phosphatase receptor-type O (PTPRO) plays an important role in the pathogenesis of hepatocellular carcinoma. Protein tyrosine phosphatase receptor-type O is a new type of protein tyrosine phosphatase, which has been proven to inhibit oncoprotein. In this paper, the potential mechanism of protein tyrosine phosphatase receptor -type O in the progression of hepatocellular carcinoma is discussed to provide reference for clinical treatment and drug development.
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- 2021
11. Structure, Function and Modulation of Striatal-enriched Protein Tyrosine Phosphatase (STEP)
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Xuben Hou, Xiao Liang, and Hao Fang
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Pharmacology ,Nervous system ,chemistry.chemical_classification ,Chemistry ,Activator (genetics) ,Organic Chemistry ,Central nervous system ,Structure function ,Protein tyrosine phosphatase ,Protein Tyrosine Phosphatases, Non-Receptor ,Striatal-enriched protein tyrosine phosphatase ,Biochemistry ,Cell biology ,Dephosphorylation ,medicine.anatomical_structure ,Enzyme ,Alzheimer Disease ,Drug Discovery ,medicine ,Humans ,Molecular Medicine ,Nervous System Diseases ,Signal Transduction - Abstract
Striatal-enriched protein tyrosine phosphatase (STEP) is exclusively expressed in the central nervous system and regulates various neuronal signaling factors through the dephosphorylation of different substrates. Dysregulated expression or uncontrollable enzymatic activity of STEP contributes to neurological disorders such as Alzheimer's disease, which makes it a promising pharmaceutical target. Herein, we have reviewed the structure and biological functions of STEP, as well as the recent development of smallmolecule STEP modulators. We hope this review will provide a reference for the further development of more potent and selective STEP inhibitors for the treatment of nervous system diseases.
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- 2021
12. HIV-1 Vif suppresses antiviral immunity by targeting STING
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Dapeng Yan, Xiaokai Zhang, Yinan Liu, Lingyan Zhu, Quanming Zou, Xiaofang Yu, Hao Zeng, Xianghui Yu, Gui Qian, Wendong Han, Zhuo Zhao, Xiaoyan Zhang, Yihua Zhang, Jianqing Xu, Tingrong Xiong, and Yu Wang
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Innate immune system ,viruses ,Immunology ,virus diseases ,Protein tyrosine phosphatase ,Protein Serine-Threonine Kinases ,biochemical phenomena, metabolism, and nutrition ,Biology ,Antiviral Agents ,Viral infectivity factor ,Immunity, Innate ,Article ,Cell biology ,Sting ,Infectious Diseases ,Immune system ,HIV-1 ,Immunology and Allergy ,Phosphorylation ,APOBEC3G ,Tyrosine kinase ,Immune Evasion - Abstract
HIV-1 infection-induced cGAS–STING–TBK1–IRF3 signaling activates innate immunity to produce type I interferon (IFN). The HIV-1 nonstructural protein viral infectivity factor (Vif) is essential in HIV-1 replication, as it degrades the host restriction factor APOBEC3G. However, whether and how it regulates the host immune response remains to be determined. In this study, we found that Vif inhibited the production of type I IFN to promote immune evasion. HIV-1 infection induced the activation of the host tyrosine kinase FRK, which subsequently phosphorylated the immunoreceptor tyrosine-based inhibitory motif (ITIM) of Vif and enhanced the interaction between Vif and the cellular tyrosine phosphatase SHP-1 to inhibit type I IFN. Mechanistically, the association of Vif with SHP-1 facilitated SHP-1 recruitment to STING and inhibited the K63-linked ubiquitination of STING at Lys337 by dephosphorylating STING at Tyr162. However, the FRK inhibitor D-65495 counteracted the phosphorylation of Vif to block the immune evasion of HIV-1 and antagonize infection. These findings reveal a previously unknown mechanism through which HIV-1 evades antiviral immunity via the ITIM-containing protein to inhibit the posttranslational modification of STING. These results provide a molecular basis for the development of new therapeutic strategies to treat HIV-1 infection.
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- 2021
13. Recent advances in the development of allosteric protein tyrosine phosphatase inhibitors for drug discovery
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Reham M Elhassan, Hao Fang, and Xuben Hou
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Pharmacology ,Signal Pathways ,Drug discovery ,Allosteric regulation ,Chemical biology ,SUPERFAMILY ,Computational biology ,Protein tyrosine phosphatase ,Biology ,Structure-Activity Relationship ,Drug development ,Drug Discovery ,Humans ,Molecular Medicine ,Enzyme Inhibitors ,Protein Tyrosine Phosphatases ,Tyrosine ,Signal Transduction - Abstract
Protein tyrosine phosphatases (PTPs) superfamily catalyzes tyrosine de-phosphorylation which affects a myriad of cellular processes. Imbalance in signal pathways mediated by PTPs has been associated with development of many human diseases including cancer, metabolic, and immunological diseases. Several compelling evidence suggest that many members of PTP family are novel therapeutic targets. However, the clinical development of conventional PTP-based active-site inhibitors originally was hampered by the poor selectivity and pharmacokinetic properties. In this regard, PTPs has been widely dismissed as "undruggable." Nonetheless, allosteric modulation has become increasingly an influential and alternative approach that can be exploited for drug development against PTPs. Unlike active-site inhibitors, allosteric inhibitors exhibit a remarkable target-selectivity, drug-likeness, potency, and in vivo activity. Intriguingly, there has been a high interest in novel allosteric PTPs inhibitors within the last years. In this review, we focus on the recent advances of allosteric inhibitors that have been explored in drug discovery and have shown an excellent result in the development of PTPs-based therapeutics. A special emphasis is placed on the structure-activity relationship and molecular mechanistic studies illustrating applications in chemical biology and medicinal chemistry.
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- 2021
14. Novel Serum Biomarkers of Neurovascular Unit Associated with Cortical Amyloid Deposition
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Noriyuki Kimura, Yasuhiro Aso, and Etsuro Matsubara
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Male ,medicine.medical_specialty ,Enzyme-Linked Immunosorbent Assay ,Plaque, Amyloid ,Standardized uptake value ,Protein tyrosine phosphatase ,Blood–brain barrier ,Adenosine Triphosphate ,Von Willebrand factor ,Alzheimer Disease ,Serum biomarkers ,Internal medicine ,medicine ,Humans ,Cognitive Dysfunction ,Aged ,Aniline Compounds ,medicine.diagnostic_test ,biology ,business.industry ,General Neuroscience ,Biological Transport ,General Medicine ,Neurovascular bundle ,Adenosine ,Thiazoles ,Psychiatry and Mental health ,Clinical Psychology ,medicine.anatomical_structure ,Endocrinology ,Positron emission tomography ,Positron-Emission Tomography ,biology.protein ,Female ,Geriatrics and Gerontology ,business ,Biomarkers ,medicine.drug - Abstract
Background: Whether blood biomarkers of neurovascular unit are associated with cortical amyloid deposition on positron emission tomography (PET) imaging remains unclear. Objective: To investigate the association between novel serum biomarkers of neurovascular unit, such as protein tyrosine phosphatase receptor type B (PTPRB), gap junction protein alpha-5 (GJA5), adenosine triphosphate-sensitive inward rectifier potassium channel-8 (KCNJ8), and von Willebrand factor (vWF), and cortical amyloid deposition. Methods: Between 2012 and 2018, 68 elderly individuals with amnestic mild cognitive impairment (32 men and 36 women; mean age 75.2 years) were enrolled. All participants underwent 11C-Pittsburgh compound-B (PiB)-PET, 18F-fluorodeoxyglucose-PET, and measurement of serum PTPRB, GJA5, KCNJ8, and vWF levels using commercially available human enzyme-linked immunosorbent assay kits. Based on the mean cortical standardized uptake value ratio, the participants were divided into two groups: PiB-negative group and PiB-positive group. Serum levels of PTPRB, GJA5, KCNJ8, and vWF were compared between the two groups. Multiple linear regression analysis was performed to investigate the relationship between serum PTPRB, GJA5, KCNJ8, and vWF levels and cortical amyloid deposition. Results: PTPRB and GJA5 levels were significantly lower and KCNJ8 and vWF levels were significantly higher in the PiB-positive group than in the PiB-negative group. PTPRB and GJA5 levels inversely correlated with mean PiB uptake, whereas KCNJ8 and vWF levels positively correlated with mean PiB uptake. Conclusion: Serum levels of PTPRB, GJA5, KCNJ8, and vWF correlate with cortical amyloid deposition. These novel blood biomarkers of neurovascular unit are useful for identifying elderly individuals at risk of developing Alzheimer’s disease.
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- 2021
15. PTPN18 promotes colorectal cancer progression by regulating the c-MYC-CDK4 axis
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Xi-Cheng Huang, Xue-Min Song, Shang-Ze Li, Run-Lei Du, Jie Chen, Xiao-Dong Zhang, Wenbin Liu, and Li Chao
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0301 basic medicine ,Medicine (General) ,CDK4 ,Colorectal cancer ,Proliferation ,MYC ,Protein tyrosine phosphatase ,QH426-470 ,medicine.disease_cause ,Biochemistry ,03 medical and health sciences ,R5-920 ,PTPN18 ,0302 clinical medicine ,Full Length Article ,Genetics ,medicine ,Molecular Biology ,Genetics (clinical) ,Chemistry ,Protein level ,Cell Biology ,Cell cycle ,medicine.disease ,030104 developmental biology ,030220 oncology & carcinogenesis ,Cancer cell ,Cancer research ,Signal transduction ,Carcinogenesis - Abstract
Protein tyrosine phosphatase non-receptor type 18 (PTPN18) is often highly expressed in colorectal cancer (CRC), but its role in this disease remains unclear. We demonstrated that PTPN18 overexpression promotes growth and tumorigenesis in CRC cells and that PTPN18 deficiency yields the opposite results in vitro. Moreover, a xenograft assay showed that PTPN18 deficiency significantly inhibited tumorigenesis in vivo. PTPN18 activated the MYC signaling pathway and enhanced CDK4 expression, which is tightly associated with the cell cycle and proliferation in cancer cells. Finally, we found that MYC interacted with PTPN18 and increased the protein level of MYC. In conclusion, our results suggest that PTPN18 promotes CRC development by stabilizing the MYC protein level, which in turn activates the MYC-CDK4 axis. Thus, PTPN18 could be a novel therapeutic target in the future.
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- 2021
16. Liprins in oncogenic signaling and cancer cell adhesion
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Ivan de Curtis, Outi Monni, Henna Pehkonen, Pehkonen, H, de Curtis, I, and Monni, O.
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Scaffold protein ,Cancer Research ,Review Article ,Protein tyrosine phosphatase ,Biology ,Extracellular matrix ,03 medical and health sciences ,0302 clinical medicine ,Nuclear Matrix-Associated Proteins ,Neoplasms ,Biomarkers, Tumor ,Cell Adhesion ,Genetics ,medicine ,Humans ,Cell adhesion ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,Cancer ,Oncogenes ,medicine.disease ,Review article ,Gene Expression Regulation, Neoplastic ,Focal adhesion ,Tumor progression ,Multigene Family ,030220 oncology & carcinogenesis ,Cancer cell ,Disease Progression ,Neuroscience ,Signal Transduction - Abstract
Liprins are a multifunctional family of scaffold proteins, identified by their involvement in several important neuronal functions related to signaling and organization of synaptic structures. More recently, the knowledge on the liprin family has expanded from neuronal functions to processes relevant to cancer progression, including cell adhesion, cell motility, cancer cell invasion, and signaling. These proteins consist of regions, which by prediction are intrinsically disordered, and may be involved in the assembly of supramolecular structures relevant for their functions. This review summarizes the current understanding of the functions of liprins in different cellular processes, with special emphasis on liprins in tumor progression. The available data indicate that liprins may be potential biomarkers for cancer progression and may have therapeutic importance.
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- 2021
17. Improved Synthesis of First Cell-Permeable Allosteric PTPRZ Inhibitor NAZ2329
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Qiang Zeng, Weiming Chen, and Wei Hu
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Trifluoromethyl ,Stereochemistry ,Cell ,Allosteric regulation ,General Chemistry ,Protein tyrosine phosphatase ,chemistry.chemical_compound ,medicine.anatomical_structure ,Drug development ,Benzyl bromide ,chemistry ,medicine ,Alkoxy group ,Phenol - Abstract
NAZ2329 is the first cell-permeable small molecular allosteric inhibitor of protein tyrosine phosphatase receptor–type Z (PTPRZ), which was considered as a new potential molecular target for drug development in glioblastoma. A facile and high-efficient synthesis of NAZ2329 was developed by a straight-forward strategy starting from key ethoxy benzyl bromide intermediate obtained from commercially available 4-(trifluoromethyl)phenol.
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- 2021
18. Shp2 regulates PM2.5-induced airway epithelial barrier dysfunction by modulating ERK1/2 signaling pathway
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Youting Zhang, Yuanyuan Zhang, Weixi Zhang, Xixi Lin, Xiaoming Wang, Yaoyao Dong, Likang Zhang, and Wanwan Chen
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Male ,Mice, Inbred ICR ,Src homology domain ,Gene knockdown ,Tight Junction Proteins ,Tight junction ,MAP Kinase Signaling System ,Chemistry ,Acute Lung Injury ,Epithelial Cells ,General Medicine ,Protein tyrosine phosphatase ,Lung injury ,Toxicology ,complex mixtures ,Cell biology ,src Homology Domains ,Mice ,Downregulation and upregulation ,Paracellular transport ,Models, Animal ,Animals ,Humans ,Respiratory epithelium ,Particulate Matter - Abstract
The impact of fine particulate matter (PM2.5) on public health has received increasing attention. Through various biochemical mechanisms, PM2.5 alters the normal structure and function of the airway epithelium, causing epithelial barrier dysfunction. Src homology domain 2-containing protein tyrosine phosphatase 2 (Shp2) has been implicated in various respiratory diseases; however, its role in PM2.5-induced epithelial barrier dysfunction remains unclear. Herein, we assessed the regulatory effects of Shp2 on PM2.5-mediated epithelial barrier function and tight junction (TJ) protein expression in both mice and human pulmonary epithelial (16HBE) cells. We observed that Shp2 levels were upregulated and claudin-4 levels were downregulated after PM2.5 stimulation in vivo and in vitro. Mice were exposed to PM2.5 to induce acute lung injury, and disrupted epithelial barrier function, with decreased transepithelial electrical resistance (TER) and increased paracellular flux that was observed in 16HBE cells. In contrast, the selective inhibition or knockdown of Shp2 retained airway epithelial barrier function and reversed claudin-4 downregulation that triggered by PM2.5, and these effects may occur through the ERK1/2 MAPK signaling pathway. These data highlight an important role of Shp2 in PM2.5-induced airway epithelial barrier dysfunction and suggest a possible new course of therapy for PM2.5-induced respiratory diseases.
- Published
- 2021
19. Nutraceutical Aid for Allergies – Strategies for Down-Regulating Mast Cell Degranulation
- Author
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Aaron Lerner, James J. DiNicolantonio, Carina Benzvi, and Mark F. McCarty
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Pulmonary and Respiratory Medicine ,Receptor complex ,hydrogen sulfide ,Syk ,Review ,Protein tyrosine phosphatase ,phycocyanobilin ,biotin ,berberine ,Immunology and Allergy ,Medicine ,nutraceuticals ,degranulation ,NADPH oxidase ,biology ,business.industry ,Degranulation ,AMPK ,allergy ,lipoic acid ,Mast cell ,Cell biology ,FcεRI-IgE receptor ,medicine.anatomical_structure ,biology.protein ,mast cell ,business ,cGMP-dependent protein kinase - Abstract
Interactions of antigens with the mast cell FcεRI-IgE receptor complex induce degranulation and boost synthesis of pro-inflammatory lipid mediators and cytokines. Activation of spleen tyrosine kinase (Syk) functions as a central hub in this signaling. The tyrosine phosphatase SHP-1 opposes Syk activity; stimulation of NADPH oxidase by FcεRI activation results in the production of oxidants that reversibly inhibit SHP-1, up-regulating the signal from Syk. Activated AMPK can suppress Syk activation by the FcεRI receptor, possibly reflecting its ability to phosphorylate the FcεRI beta subunit. Cyclic GMP, via protein kinase G II, enhances the activity of SHP-1 by phosphorylating its C-terminal region; this may explain its inhibitory impact on mast cell activation. Hydrogen sulfide (H2S) likewise opposes mast cell activation; H2S can boost AMPK activity, up-regulate cGMP production, and trigger Nrf2-mediated induction of Phase 2 enzymes – including heme oxygenase-1, whose generation of bilirubin suppresses NADPH oxidase activity. Phycocyanobilin (PCB), a chemical relative of bilirubin, shares its inhibitory impact on NADPH oxidase, rationalizing reported anti-allergic effects of PCB-rich spirulina ingestion. Phase 2 inducer nutraceuticals can likewise oppose the up-regulatory impact of NADPH oxidase on FcεRI signaling. AMPK can be activated with the nutraceutical berberine. High-dose biotin can boost cGMP levels in mast cells via direct stimulation of soluble guanylate cyclase. Endogenous generation of H2S in mast cells can be promoted by administering N-acetylcysteine and likely by taurine, which increases the expression of H2S-producing enzymes in the vascular system. Mast cell stabilization by benifuuki green tea catechins may reflect the decreased surface expression of FcεRI.
- Published
- 2021
20. <scp>SHP2</scp> : The protein tyrosine phosphatase involved in chronic pulmonary inflammation and fibrosis
- Author
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Bing-Chang Chen, Chiou Feng Lin, Chia Ling Chen, Pei-Yun Lin, and Chun-Jung Chang
- Subjects
MAPK/ERK pathway ,Respiratory Tract Diseases ,Clinical Biochemistry ,Protein Tyrosine Phosphatase, Non-Receptor Type 11 ,Protein tyrosine phosphatase ,Biochemistry ,chemistry.chemical_compound ,Fibrosis ,Pulmonary fibrosis ,Genetics ,medicine ,Humans ,Molecular Biology ,Protein kinase B ,PI3K/AKT/mTOR pathway ,business.industry ,Tyrosine phosphorylation ,Pneumonia ,Cell Biology ,medicine.disease ,chemistry ,Cancer research ,business ,Signal Transduction ,Proto-oncogene tyrosine-protein kinase Src - Abstract
Chronic respiratory diseases (CRDs), including pulmonary fibrosis, chronic obstructive pulmonary disease (COPD), lung cancer, and asthma, are significant global health problems due to their prevalence and rising incidence. The roles of protein tyrosine kinases (PTKs) and protein tyrosine phosphatases (PTPs) in controlling tyrosine phosphorylation of targeting proteins modulate multiple physiological cellular responses and contribute to the pathogenesis of CRDs. Src homology-2 domain-containing PTP2 (SHP2) plays a pivotal role in modulating downstream growth factor receptor signaling and cytoplasmic PTKs, including MAPK/ERK, PI3K/AKT, and JAK/STAT pathways, to regulate cell survival and proliferation. In addition, SHP2 mutation and activation are commonly implicated in tumorigenesis. However, little is known about SHP2 in chronic pulmonary inflammation and fibrosis. This review discusses the potential involvement of SHP2 deregulation in chronic pulmonary inflammation and fibrosis, as well as the therapeutic effects of targeting SHP2 in CRDs.
- Published
- 2021
21. DNA Interaction and Cytotoxic studies on Mono/Di-Oxo and Peroxo- Vanadium (V) complexes - A Review
- Author
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Saraswathi Kothandan and Angappan Sheela
- Subjects
Pharmacology ,MAPK/ERK pathway ,Stereochemistry ,Kinase ,Vanadium ,chemistry.chemical_element ,Antineoplastic Agents ,Cell Cycle Checkpoints ,DNA ,General Medicine ,Protein tyrosine phosphatase ,Ligand (biochemistry) ,chemistry.chemical_compound ,chemistry ,Coordination Complexes ,Neoplasms ,Drug Discovery ,Humans ,Phosphorylation ,Drug Screening Assays, Antitumor ,Protein Tyrosine Phosphatases ,Vanadates ,Tyrosine ,Lead compound - Abstract
Vanadium is considered to be biologically significant and several vanadium IV & V complexes have successfully been studied as chemotherapeutic agents like insulin mimetic, antibacterial, antioxidant, and anticancer activities. The divergent ligand systems also play a pivotal role in designing the metal complex with desired properties. Thus, the combination of both with their synergistic advantages results in a potential drug candidate. Different mechanistic pathways have been proposed to explain the antitumor effects of vanadium complexes, including induction of tyrosine residues phosphorylation, inhibition of key protein tyrosine phosphatases (PTPases), which in turn promote the activation of the extracellular regulated kinase cascading (ERK) pathway. In the current review, we have summarized the work on vanadium (V) complexes based on different ligand systems and their biological significance as an anticancer lead compound.
- Published
- 2021
22. Crocetin imparts antiproliferative activity via inhibiting <scp>STAT3</scp> signaling in hepatocellular carcinoma
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Arunachalam Chinnathambi, Shobith Rangappa, Chulwon Kim, Kanjoormana Aryan Manu, Kanchugarakoppal S. Rangappa, Sulaiman Ali Alharbi, Alan Prem Kumar, Chakrabhavi Dhananjaya Mohan, Kwang Seok Ahn, and Kodappully Sivaraman Siveen
- Subjects
STAT3 Transcription Factor ,Clinical Biochemistry ,Crocetin ,Antineoplastic Agents ,Apoptosis ,Protein tyrosine phosphatase ,Biochemistry ,chemistry.chemical_compound ,Cyclin D1 ,Cell Movement ,Survivin ,STAT5 Transcription Factor ,Genetics ,Humans ,Vitamin A ,STAT3 ,Molecular Biology ,STAT5 ,Cell Proliferation ,biology ,Caspase 3 ,Interleukin-6 ,Cell growth ,Kinase ,Protein Tyrosine Phosphatase, Non-Receptor Type 6 ,Hep G2 Cells ,Cell Biology ,Janus Kinase 2 ,Carotenoids ,Gene Expression Regulation, Neoplastic ,chemistry ,biology.protein ,Cancer research ,Poly(ADP-ribose) Polymerases ,Proto-Oncogene Proteins c-akt ,Signal Transduction - Abstract
STAT3 is a key oncogenic transcription factor, often overactivated in several human cancers including hepatocellular carcinoma (HCC). STAT3 modulates the expression of genes that are connected with cell proliferation, antiapoptosis, metastasis, angiogenesis, and immune evasion in tumor cells. In this study, we investigated the effect of crocetin on the growth of HCC cells and dissected its underlying molecular mechanism in imparting a cytotoxic effect. Crocetin suppressed proliferation, promoted apoptosis, and counteracted the invasive capacity of HCC cells. Besides, crocetin downregulated the constitutive/inducible STAT3 activation (STAT3Y705 ), nuclear accumulation of STAT3 along with suppression of its DNA binding activity in HCC cells with no effect on STAT5 activation. Crocetin suppressed the activity of upstream kinases such as Src, JAK1, and JAK2. Sodium pervanadate treatment terminated the crocetin-propelled STAT3 inhibition suggesting the involvement of tyrosine phosphatases. Crocetin increased the expression of SHP-1 and siRNA-mediated SHP-1 silencing resulted in the negation of crocetin-driven STAT3 inhibition. Further investigation revealed that crocetin treatment inhibited the expression of STAT3 regulated genes (Bcl-2, Bcl-xL, cyclin D1, survivin, VEGF, COX-2, and MMP-9). Taken together, this report presents crocetin as a novel abrogator of the STAT3 pathway in HCC cell lines.
- Published
- 2021
23. Proautoimmune Allele of Tyrosine Phosphatase, PTPN22, Enhances Tumor Immunity
- Author
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Robin C. Orozco, Kerri A. Mowen, Linda A. Sherman, and Kristi Marquardt
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Male ,Tumor Immunology ,Skin Neoplasms ,Immunology ,Melanoma, Experimental ,Mice, Transgenic ,Protein tyrosine phosphatase ,Biology ,medicine.disease_cause ,PTPN22 ,Carcinoma, Lewis Lung ,Mice ,Lymphocytes, Tumor-Infiltrating ,Immune system ,Immunity ,Cell Line, Tumor ,medicine ,Animals ,Immunology and Allergy ,Cytotoxic T cell ,Allele ,Alleles ,Mutation ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,Mice, Inbred C57BL ,Phenotype ,Cell culture ,Cancer research ,Female ,Neoplasm Transplantation - Abstract
The 1858C>T allele of the tyrosine phosphatase PTPN22 (causing amino acid substitution R620W in encoded protein lymphoid tyrosine phosphatase) is present in 5–10% of the North American population and is strongly associated with numerous autoimmune diseases. Although much research has been done to define how this allele potentiates autoimmunity, the influence PTPN22 and its proautoimmune allele have in tumor immunity is poorly defined. To interrogate the role this allele may have in the antitumor immune response, we used CRISPR/Cas9 to generate mice in which the ortholog of lymphoid tyrosine phosphatase, PEST domain–enriched protein (PEP), is mutated at position 619 to produce the relevant proautoimmune mutation (R619W). Results of this study show that mice homozygous for this alteration (PEP-619WW) resist tumor growth as compared with wild-type mice. Consistent with these results, tumors from PEP-619WW mice have more CD45 infiltrates containing more activated CD8 T cells and CD4 T cells. In addition, there are more conventional dendritic cell type 1 (cDC1) cells and fewer myeloid-derived suppressor cells in tumors from PEP-619WW mice. Interestingly, the tumor-infiltrating PEP-619WW cDC1 cells have decreased PD-L1 expression compared with cDC1 cells from PEP-wild-type mice. Taken together, our data show that the proautoimmune allele of Ptpn22 drives a strong antitumor response in innate and adaptive immune cells resulting in superior control of tumors.
- Published
- 2021
24. Integrated Approach to Identify Selective PTP1B Inhibitors Targeting the Allosteric Site
- Author
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Lei Zhang, Yang Ying, Zhiyan Xiao, Fei Ye, and Jin-Ying Tian
- Subjects
Protein Tyrosine Phosphatase, Non-Receptor Type 1 ,Virtual screening ,Drug discovery ,Chemistry ,General Chemical Engineering ,Allosteric regulation ,Structural diversity ,General Chemistry ,Computational biology ,Protein tyrosine phosphatase ,Molecular Dynamics Simulation ,Library and Information Sciences ,Integrated approach ,Protein Tyrosine Phosphatase 1B ,Computer Science Applications ,Catalytic Domain ,Enzyme Inhibitors ,Allosteric Site ,hormones, hormone substitutes, and hormone antagonists - Abstract
Protein tyrosine phosphatase 1B (PTP1B) is an intractable target for drug discovery due to its conservative and cationic catalytic site. Targeting alternative allosteric sites of PTP1B is a promising strategy to achieve specificity and bioavailability. A hierarchical virtual screening based on a previously identified allosteric site was applied to search for potential PTP1B inhibitors with better pharmacological profiles. Four potent PTP1B inhibitors (H1, H3, H7, and H9) with structures distinct from known inhibitors were identified. Among them, H3 and H9 demonstrated evident selectivity to PTP1B over homologous T-cell protein tyrosine phosphatase (TCPTP) and SHP2. Molecular dynamics simulations and molecular mechanics-generalized Born surface area (MM-GBSA) calculations recognized Phe280, Phe196, Leu192, and Asn193 as key residues responsible for potent allosteric inhibition and excellent PTP selectivity. The results not only expand the structural diversity but also aid the future molecular design of PTP1B allosteric inhibitors.
- Published
- 2021
25. Significant Loop Motions in the SsoPTP Protein Tyrosine Phosphatase Allow for Dual General Acid Functionality
- Author
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Jihye Jo, J. Patrick Loria, Sean J. Johnson, Drake Comer, Keith J. Olsen, Charsti A. Glaittli, Justin Pinkston, and Alvan C. Hengge
- Subjects
Models, Molecular ,Protein Conformation ,Stereochemistry ,ved/biology.organism_classification_rank.species ,Allosteric regulation ,Protein tyrosine phosphatase ,Crystallography, X-Ray ,Biochemistry ,Catalysis ,Article ,Motion ,Transition state analog ,Catalytic Domain ,Aspartic acid ,Humans ,Amino Acid Sequence ,Asparagine ,Phosphorylation ,biology ,ved/biology ,Chemistry ,Sulfolobus solfataricus ,Leaving group ,Active site ,Kinetics ,biology.protein ,Protein Tyrosine Phosphatases - Abstract
Conformational dynamics are important factors in the function of enzymes, including protein tyrosine phosphatases (PTPs). Crystal structures of PTPs first revealed the motion of a protein loop bearing a conserved catalytic aspartic acid, and subsequent nuclear magnetic resonance and computational analyses have shown the presence of motions, involved in catalysis and allostery, within and beyond the active site. The tyrosine phosphatase from the thermophilic and acidophilic Sulfolobus solfataricus (SsoPTP) displays motions of its acid loop together with dynamics of its phosphoryl-binding P-loop and the Q-loop, the first instance of such motions in a PTP. All three loops share the same exchange rate, implying their motions are coupled. Further evidence of conformational flexibility comes from mutagenesis, kinetics, and isotope effect data showing that E40 can function as an alternate general acid to protonate the leaving group when the conserved acid, D69, is mutated to asparagine. SsoPTP is not the first PTP to exhibit an alternate general acid (after VHZ and TkPTP), but E40 does not correspond to the sequence or structural location of the alternate general acids in those precedents. A high-resolution X-ray structure with the transition state analogue vanadate clarifies the role of the active site arginine R102, which varied in structures of substrates bound to a catalytically inactive mutant. The coordinated motions of all three functional loops in SsoPTP, together with the function of an alternate general acid, suggest that catalytically competent conformations are present in solution that have not yet been observed in crystal structures.
- Published
- 2021
26. Protein tyrosine phosphatase Shp2 positively regulates cold stress-induced tyrosine phosphorylation of SIRPα in neurons
- Author
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Daiki Jingu, Mika Iino, Eriko Urano, Shinya Kusakari, Joji Kawasaki, Yuriko Hayashi, Hiroshi Ohnishi, and Takashi Matozaki
- Subjects
inorganic chemicals ,Immunoblotting ,Allosteric regulation ,Dasatinib ,Biophysics ,Mice, Transgenic ,Protein Tyrosine Phosphatase, Non-Receptor Type 11 ,macromolecular substances ,Protein tyrosine phosphatase ,environment and public health ,Biochemistry ,chemistry.chemical_compound ,Piperidines ,medicine ,Animals ,Phosphorylation ,Receptors, Immunologic ,Protein Kinase Inhibitors ,Molecular Biology ,Cells, Cultured ,Cold stress ,Mice, Knockout ,Neurons ,Chemistry ,Cold-Shock Response ,Tyrosine phosphorylation ,Cell Biology ,Cell biology ,Cold Temperature ,enzymes and coenzymes (carbohydrates) ,Pyrimidines ,medicine.anatomical_structure ,Membrane protein ,Tyrosine ,bacteria ,Neuron ,medicine.drug - Abstract
The membrane protein SIRPα is a cold stress-responsive signaling molecule in neurons. Cold stress directly induces tyrosine phosphorylation of SIRPα in its cytoplasmic region, and phosphorylated SIRPα is involved in regulating experience-dependent behavioral changes in mice. Here, we examined the mechanism of cold stress-induced SIRPα phosphorylation in vitro and in vivo. The levels of activated Src family protein tyrosine kinases (SFKs), which phosphorylate SIRPα, were not increased by lowering the temperature in cultured neurons. Although the SFK inhibitor dasatinib markedly reduced SIRPα phosphorylation, low temperature induced an increase in SIRPα phosphorylation even in the presence of dasatinib, suggesting that SFK activation is not required for low temperature-induced SIRPα phosphorylation. However, in the presence of pervanadate, a potent inhibitor of protein tyrosine phosphatases (PTPases), SIRPα phosphorylation was significantly reduced by lowering the temperature, suggesting that either the inactivation of PTPase(s) that dephosphorylate SIRPα or increased protection of phosphorylated SIRPα from the PTPase activity is important for low temperature-induced SIRPα phosphorylation. Inactivation of PTPase Shp2 by the allosteric Shp2 inhibitor SHP099, but not by the competitive inhibitor NSC-87877, reduced SIRPα phosphorylation in cultured neurons. Shp2 knockout also reduced SIRPα phosphorylation in the mouse brain. Our data suggest that Shp2, but not SFKs, positively regulates cold stress-induced SIRPα phosphorylation in a PTPase activity-independent manner.
- Published
- 2021
27. PTPRU, a quiescence-induced receptor tyrosine phosphatase negatively regulates osteogenic differentiation of human mesenchymal stem cells
- Author
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Jyotsna Dhawan and Mohammad Rumman
- Subjects
Cell cycle checkpoint ,Biophysics ,Protein tyrosine phosphatase ,Biochemistry ,Osteogenesis ,medicine ,Humans ,Bone regeneration ,Molecular Biology ,Wnt Signaling Pathway ,Cells, Cultured ,Chemistry ,Mesenchymal stem cell ,Wnt signaling pathway ,Receptor-Like Protein Tyrosine Phosphatases, Class 2 ,Cell Differentiation ,Mesenchymal Stem Cells ,Cell Biology ,Cell cycle ,Phosphoric Monoester Hydrolases ,Cell biology ,medicine.anatomical_structure ,Adipogenesis ,Tyrosine ,Bone marrow ,Carrier Proteins - Abstract
Bone marrow mesenchymal stem cells (MSCs) are heterogeneous osteo-progenitors that are mainly responsible for bone regeneration and homeostasis. In vivo, a subpopulation of bone marrow MSCs persists in a quiescent state, providing a source of new cells for repair. Previously, we reported that induction of quiescence in hMSCs in vitro skews their differentiation potential in favour of osteogenesis while suppressing adipogenesis. Here, we uncover a new role for a protein tyrosine phosphatase, receptor type U (PTPRU) in repressing osteogenesis during quiescence. A 75 kD PTPRU protein isoform was found to be specifically induced during quiescence and down-regulated during cell cycle reactivation. Using siRNA-mediated knockdown, we report that in proliferating hMSC, PTPRU preserves self-renewal, while in quiescent hMSC, PTPRU not only maintains reversibility of cell cycle arrest but also suppresses expression of osteogenic lineage genes. Knockdown of PTPRU in proliferating or quiescent hMSC de-represses osteogenic markers, and enhances induced osteogenic differentiation. We also show that PTPRU positively regulates a β-catenin-TCF transcriptional reporter. Taken together, our study suggests a role for a quiescence-induced 75kD PTPRU isoform in modulating bone differentiation in hMSC, potentially involving the Wnt pathway.
- Published
- 2022
28. Targeted Degradation of the Oncogenic Phosphatase SHP2
- Author
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Ryan J. Lumpkin, Julia M. Rogers, Eric S. Fischer, Katherine A. Donovan, Ruili Cao, Vidyasiri Vemulapalli, Gregory D. Cuny, Soumya S. Ray, Stephen C. Blacklow, Matthew T. Henke, Munhyung Bae, and Tom C. M. Seegar
- Subjects
Phosphatase ,Allosteric regulation ,Antineoplastic Agents ,Protein Tyrosine Phosphatase, Non-Receptor Type 11 ,Stimulation ,Protein tyrosine phosphatase ,Crystallography, X-Ray ,Biochemistry ,Article ,Receptor tyrosine kinase ,Cell Line, Tumor ,Neoplasms ,medicine ,Humans ,Molecular Targeted Therapy ,Cell Proliferation ,biology ,Chemistry ,Methanol ,Pomalidomide ,Pyrazines ,Mutation ,Proteolysis ,Cancer cell ,Cancer research ,biology.protein ,Linker ,Signal Transduction ,medicine.drug - Abstract
SHP2 is a protein tyrosine phosphatase that plays a critical role in the full activation of the Ras/MAPK pathway upon stimulation of receptor tyrosine kinases (RTKs), which are frequently amplified or mutationally activated in human cancer. In addition, activating mutations in SHP2 result in developmental disorders and hematologic malignancies. Several allosteric inhibitors have been developed for SHP2 and are currently in clinical trials. Here, we report the development and evaluation of a SHP2 PROTAC created by conjugating RMC-4550 with pomalidomide using a PEG linker. This molecule is highly selective for SHP2, induces degradation of SHP2 in leukemic cells at sub-micromolar concentration, inhibits MAPK signaling, and suppresses cancer cell growth. SHP2 PROTACs serve as an alternative strategy for targeting ERK-dependent cancers and are useful tools alongside allosteric inhibitors for dissecting the mechanisms by which SHP2 exerts its oncogenic activity.
- Published
- 2021
29. Protein tyrosine phosphatase 1B regulates fibroblasts proliferation, motility and extracellular matrix synthesis via the MAPK/ERK signalling pathway in keloid
- Author
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Chuan-Yuan Wei, Xin-Yi Deng, Qiang Wang, Yanwen Yang, Leqi Qian, Fazhi Qi, Jiaqi Liu, and Lu Wang
- Subjects
Protein Tyrosine Phosphatase, Non-Receptor Type 1 ,MAPK/ERK pathway ,Gene knockdown ,Cell growth ,Chemistry ,Motility ,Dermatology ,Protein tyrosine phosphatase ,Fibroblasts ,medicine.disease ,Biochemistry ,Hedgehog signaling pathway ,Extracellular Matrix ,Cell biology ,Extracellular matrix ,Keloid ,medicine ,Humans ,skin and connective tissue diseases ,Molecular Biology ,Cells, Cultured ,hormones, hormone substitutes, and hormone antagonists ,Cell Proliferation - Abstract
Keloid is a fibroproliferative disorder resulting from trauma, characterized by abnormal activation of keloid fibroblasts and excessive deposition of extracellular matrix (ECM). It affects life quality of patients and lacks of effective therapeutic targets. Protein tyrosine phosphatase 1B (PTP1B) belongs to the protein tyrosine phosphatases and participates in many cellular processes such as metabolism, proliferation and motility. It has been reported that PTP1B negatively regulated diabetic wound healing and tumor progression. However, its effects in keloid remain unclear. Here, we aimed to evaluate the effects of PTP1B on keloid fibroblasts which play essential roles in keloids pathogenesis. Our results revealed that PTP1B expression was decreased both in keloid tissues and in keloid fibroblasts compared to healthy controls. Keloid fibroblasts (KFs) showed higher cell proliferation, motility, ECM production and ERK activity than normal fibroblasts (NFs). Overexpression of PTP1B in KFs and NFs inhibited cell proliferation, motility, ECM synthesis and the MAPK/ERK signalling pathway while knockdown of PTP1B showed converse effects. The rescue experiments with ERK inhibitor further verified that MAPK/ERK signalling pathway involved in PTP1B regulatory network. Taken together, our findings indicated that overexpression of PTP1B suppressed keloid fibroblasts bio-behaviours and promoted their phenotype switch to normal cells via inhibiting the MAPK/ERK signalling pathway, suggesting it may be a potential anti-keloid therapy.
- Published
- 2021
30. Evaluation of differential serum expression of three factors and pulmonary function in patients with silicosis
- Author
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Xia Yu Duan, Liang He Liu, Feng Shi Li, Kui Sheng Zhang, Ying Zhu, Yun Qi Cheng, Xin Jing Yao, Hong Xu, Xiang Ju Yuan, and Fang Yang
- Subjects
medicine.medical_specialty ,Silicosis ,Vital Capacity ,ptpn2 ,Protein tyrosine phosphatase ,Complement factor B ,Gastroenterology ,Pulmonary function testing ,Forced Expiratory Volume ,Internal medicine ,Animals ,Humans ,Medicine ,In patient ,Occupational lung disease ,Lung ,Protein Tyrosine Phosphatase, Non-Receptor Type 2 ,medicine.diagnostic_test ,business.industry ,Kinase ,pulmonary function ,Public Health, Environmental and Occupational Health ,General Medicine ,medicine.disease ,Rats ,Respiratory Function Tests ,Bronchoalveolar lavage ,factor b ,roc ,business ,early diagnosis - Abstract
Objectives Silicosis is a chronic occupational lung disease. As was previously found by the authors, some proteins increased in the lung tissue of activated rats, and protein tyrosine phosphatase non-receptor type 2 (PTPN2), factor B, and vaccinia-related kinase 1 (VRK1) showed highly differential expressions. Material and Methods In this study, serum and bronchoalveolar lavage fluid samples were collected from patients with silicosis and healthy people to verify the expression of PTPN2, factor B, and VRK1. The diagnostic value of differentially expressed proteins for silicosis was judged. Results The expression levels of serum PTPN2, VRK1, and factor B in patients with silicosis were significantly higher than those in the control group (p < 0.01). Higher serum PTPN2 and factor B concentrations significantly and negatively correlated with the ratio of forced expiratory volume in 1 s to forced vital capacity (FEV 1 /FVC), maximum vital capacity (VC max ), FEV 1 , and FVC, suggesting that the high expression of PTPN2 and factor B is associated with decreased pulmonary ventilation function and restrictive ventilatory impairment in patients with silicosis. All area under curve (AUC) measurements generated from single detection events were >0.744, with PTPN2 reaching the highest value (0.858). The AUC, sensitivity, and specificity for the combined diagnosis using factor B and PTPN2 were 0.907, 86.91% and 85.07%, respectively, for factor B and PTPN2. The 3 differentially expressed proteins are potential classes of predictive biomarkers for silicosis. Conclusions Regarding the economy and test practicality, the best diagnostic combination is factor B and PTPN2 for the analysis of AUC, sensitivity and specificity. Int J Occup Med Environ Health. 2021;34(4):527–40
- Published
- 2021
31. Exploring the cause of the dual allosteric targeted inhibition attaching to allosteric sites enhancing SHP2 inhibition
- Author
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Zhou Liang, Wang Run-ling, Yang Wenyu, Du Shan, Wu JingWei, Li LiPeng, Ma Ying, Li Wei-Ya, and Ma Yang-Chun
- Subjects
Chemistry ,Organic Chemistry ,Allosteric regulation ,A protein ,Protein Tyrosine Phosphatase, Non-Receptor Type 11 ,Tyrosine phosphorylation ,General Medicine ,Protein tyrosine phosphatase ,Molecular Dynamics Simulation ,Catalysis ,Inorganic Chemistry ,chemistry.chemical_compound ,Allosteric Regulation ,Neoplasms ,Drug Discovery ,Biophysics ,Humans ,Physical and Theoretical Chemistry ,Molecular Biology ,Allosteric Site ,Information Systems - Abstract
SHP2 is a protein tyrosine phosphatase (PTP) that can regulate the tyrosine phosphorylation level. Overexpression of SHP2 will promote the development of cancer diseases, so SHP2 has become one of the popular targets for the treatment of cancer. Studies have reported that both SHP099 and SHP844 are inhibitors of SHP2 and bind to different allosteric sites 1 and 2, respectively. Studies have shown that combining SHP099 with SHP844 will enhance pharmacological pathway inhibition in cells. This study uses molecular dynamic simulations to explore the dual allosteric targeted inhibition mechanism. The result shows that the residues THR108-TRP112 (allosteric site 1) move to LEU236-GLN245 (αB-αC link loop in PTP domain) , the residues of GLN79-GLN87 (allosteric site 2) get close to LEU262-GLN269 (αA-αB link loop in PTP domain) and HIS458-ARG465 (P-loop) come near to ARG501-THR507 (Q-loop) in SHP2-SHP099-SHP844 system, which makes the "inactive conformation" more stable and prevents the substrate from entering the catalytic site. Meanwhile, residue GLU110 (allosteric site 1), ARG265 (allosteric site 2), and ARG501 (Q-loop) are speculated to be the key residues that causing the SHP2 protein in auto-inhibition conformation. It is hoped that this study will provide clues for the development of the dual allosteric targeted inhibition of SHP2.
- Published
- 2021
32. Overexpression of the PTPN22 Autoimmune Risk Variant LYP-620W Fails to Restrain Human CD4+ T Cell Activation
- Author
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Leeana D. Peters, Daniel J. Perry, Zhao Han, Clive Wasserfall, Mark A. Atkinson, Lin Zhang, Clayton E. Mathews, Todd M. Brusko, and Priya Saikumar Lakshmi
- Subjects
T cell ,Cellular differentiation ,Immunology ,Autoimmunity ,Protein tyrosine phosphatase ,Lymphocyte Activation ,medicine.disease_cause ,T-Lymphocytes, Regulatory ,Article ,Immune tolerance ,PTPN22 ,T-Lymphocyte Subsets ,Immune Tolerance ,medicine ,Humans ,Immunology and Allergy ,Signaling Lymphocytic Activation Molecule Associated Protein ,Cells, Cultured ,Cell Proliferation ,Cell growth ,Chemistry ,T-cell receptor ,Genetic Variation ,Cell Differentiation ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,medicine.anatomical_structure ,Gene Expression Regulation ,Mutation ,Cancer research ,Immunologic Memory - Abstract
A missense mutation (R620W) of protein tyrosine phosphatase nonreceptor type 22 (PTPN22), which encodes lymphoid-tyrosine phosphatase (LYP), confers genetic risk for multiple autoimmune diseases including type 1 diabetes. LYP has been putatively demonstrated to attenuate proximal T and BCR signaling. However, limited data exist regarding PTPN22 expression within primary T cell subsets and the impact of the type 1 diabetes risk variant on human T cell activity. In this study, we demonstrate endogenous PTPN22 is differentially expressed and dynamically controlled following activation. From control subjects homozygous for the nonrisk allele, we observed 2.1- (p < 0.05) and 3.6-fold (p < 0.001) more PTPN22 transcripts in resting CD4+ memory and regulatory T cells (Tregs), respectively, over naive CD4+ T cells, with expression peaking 24 h postactivation. When LYP was overexpressed in conventional CD4+ T cells, TCR signaling and activation were blunted by LYP-620R (p < 0.001) but only modestly affected by the LYP-620W risk variant versus mock-transfected control, with similar results observed in Tregs. LYP overexpression only impacted proliferation following activation by APCs but not anti-CD3– and anti-CD28–coated microbeads, suggesting LYP modulation of pathways other than TCR. Notably, proliferation was significantly lower with LYP-620R than with LYP-620W overexpression in conventional CD4+ T cells but was similar in Treg. These data indicate that the LYP-620W variant is hypomorphic in the context of human CD4+ T cell activation and may have important implications for therapies seeking to restore immunological tolerance in autoimmune disorders.
- Published
- 2021
33. Ambiguous Effects of Prolonged Dietary Supplementation with a Striatal-Enriched Protein Tyrosine Phosphatase Inhibitor, TC-2153, on a Rat Model of Sporadic Alzheimer’s Disease
- Author
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N. A. Muraleva, N. G. Kolosova, T. M. Khomenko, A. O. Burnyasheva, E. A. Rudnitskaya, D. V. Telegina, K. P. Volcho, T. A. Kozlova, and N. F. Salakhutdinov
- Subjects
medicine.medical_specialty ,business.industry ,Rat model ,Morris water navigation task ,Hippocampus ,Disease ,Protein tyrosine phosphatase ,medicine.disease ,Biochemistry ,Cortex (botany) ,Cellular and Molecular Neuroscience ,Endocrinology ,Internal medicine ,Medicine ,Dementia ,business ,Prefrontal cortex ,Molecular Biology - Abstract
Abstract Alzheimer’s disease (AD) is the most common type of dementia and is currently incurable. After unsuccessful attempts to create drugs targeting the amyloid-β pathway, a search for alternative approaches and treatments targeting nonamyloid AD pathologies is currently underway. One of them is inhibition of striatal-enriched protein tyrosine phosphatase (STEP) activity, which is increased in the prefrontal cortex of AD patients. Here we examined effects of prolonged treatment of OXYS rats which mimic key signs of sporadic AD with a STEP inhibitor, TC-2153, on the progression of signs of AD. TC-2153 had an ambiguous effect on the behavior of the animals: it significantly reduced the already low locomotor and exploratory activities and enhanced anxiety-related behavior in OXYS rats but improved their long-term memory in the Morris water maze. Moreover, TC-2153 had no effect on the accumulation of the amyloid-β protein and on the STEP61 protein level; the latter in the cortex and hippocampus did not differ between OXYS rats and control Wistar rats. These results suggest that the effects of prolonged treatment with TC-2153 may be mediated by mechanisms not related to STEP. In particular, TC-2153 can act as a potential hydrogen sulfide donor and thus substantially affect redox homeostasis.
- Published
- 2021
34. Turbinafuranone A–C, new 2-furanone analogues from marine macroalga Turbinaria ornata as prospective anti-hyperglycemic agents attenuate tyrosine phosphatase-1B
- Author
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Shubhajit Dhara and Kajal Chakraborty
- Subjects
biology ,Chemistry ,Stereochemistry ,Organic Chemistry ,Protein tyrosine phosphatase ,2-Furanone ,biology.organism_classification ,Sodium metavanadate ,chemistry.chemical_compound ,Postprandial ,Turbinaria ornata ,Sargassaceae ,General Pharmacology, Toxicology and Pharmaceutics ,Tyrosine ,IC50 - Abstract
Chemical investigation of Phaeophytan marine macroalga Turbinaria ornata (family Sargassaceae) resulted in the characterization of three 2-furanone analogues, which were characterized as 6, 7-dihydroxy-8-methyl-3-(5′-methyloct-4′-en-1′-yl)-hexahydrocyclooct-1-en-[1, 2-c]furan-11-one (turbinafuranone A), 4-hydroxy-3-isopropyl-7, 8-dimethyl-6-(pentan-2′-acetate)-hexahydrocycloocta-1-en-[1, 2-c]furan-11-one (turbinafuranone B), and 6-acetoxy-8-ethyl-5-methoxy-3-(2′-methylhex-4′-en-1′-yl)-pentahydrocycloocta-1, 7-dien-[1, 2-c]furan-11-one (turbinafuranone C). Inhibitory property of turbinafuranone B against tyrosine phosphatase-1B was significantly greater (IC50 2.42 mM) than standard agent sodium metavanadate (IC50 2.52 mM). Greater electronic properties along with molecular docking experiments corroborated the attenuation property of turbinafuranone B against protein tyrosine phosphatase-1B, by exhibiting minimum binding energy of −11.80 kcal/mol compared to other studied analogues. The results demonstrated that the undescribed turbinafuranone B might be used as prospective natural anti-hyperglycemic lead to alleviate the likelihood of higher postprandial blood glucose levels.
- Published
- 2021
35. Retracted: DNA methylation-mediated downregulation of PTPN3 attenuates to boost TGF-β signaling in osteosarcoma cells
- Author
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Xinliang Zhang, Fan Zhang, Hongda Gong, Chunqiang Zhang, Guo Peiyu, Kaili Du, Ying Huang, and Zhenkai Lou
- Subjects
Cancer Research ,biology ,Chemistry ,General Medicine ,SMAD ,Protein tyrosine phosphatase ,Cell biology ,Ubiquitin ligase ,Mothers against decapentaplegic homolog 2 ,Downregulation and upregulation ,DNA methylation ,biology.protein ,DNMT1 ,Phosphorylation - Abstract
The misregulation of transforming growth factor-β (TGF-β) signaling can cause tumorigenesis, but the activation and suppression of TGF-β signaling are complicated biological processes. We discovered a protein tyrosine phosphatase nonreceptor 3 (PTPN3)-dependent regulatory mechanism in uncancerous osteoblast cells that involved a stabilizing PTPN3 interaction with the TGF-β type I receptor (TGFBR1), which impaired TGFBR1 ubiquitination by the Smurf2 (Smad ubiquitination regulatory factor 2) E3 ligase. TGFBR1 facilitated the phosphorylation of Smad2/3 (SMAD family member 2 and 3), and the phosphorylated Smad2/3 recruited Smad4 to assemble a complex that then was translocated into the nucleus to initiate gene transcription. By contrast, PTPN3 was significantly downregulated in osteosarcoma cells because the increased DNMT1 (DNA methyltransferase 1) caused a higher methylation level in the promoter of PTPN3. The decrease of PTPN3 failed to stabilize TGFBR1, causing the ubiquitination and degradation of TGFBR1 by Smurf2. The degradation of TGFBR1 impaired the phosphorylation of Smad2/3 and prevented the nuclear translocation of the Smad2/3/4 complex, thereby causing the dysregulation of TGF-β target genes and triggering tumorigenesis. Collectively, our results reveal that the DNA methylation-mediated downregulation of PTPN3 disables the stabilization of TGFBR1 and that the degradation of TGFBR1 by Smurf2 E3 ligase blocks Smad2/3/4-mediated gene expression that promotes the tumorigenesis of osteosarcoma.
- Published
- 2021
36. The Eyes Absent proteins in development and in developmental disorders
- Author
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Kaushik Roychoudhury, Rashmi S. Hegde, and Upendra Kumar Soni
- Subjects
0301 basic medicine ,Cell signaling ,Morphogenesis ,Protein tyrosine phosphatase ,Eyes Absent ,Organ development ,Biology ,Eye ,Kidney ,protein tyrosine phosphatase ,Biochemistry ,Molecular Bases of Health & Disease ,Congenital Abnormalities ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Animals ,Humans ,Genetic Predisposition to Disease ,Review Articles ,Tissue homeostasis ,Branchio-oto-renal syndrome ,Post-Translational Modifications ,Molecular signaling ,Gene Expression Regulation, Developmental ,medicine.disease ,Cell biology ,030104 developmental biology ,organ development ,Mutation ,Trans-Activators ,retinal determination gene network ,Protein Tyrosine Phosphatases ,branchio-oto-renal syndrome ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
The Eyes Absent (EYA) transactivator-phosphatase proteins are important contributors to cell-fate determination processes and to the development of multiple organs. The transcriptional regulatory activity as well as the protein tyrosine phosphatase activities of the EYA proteins can independently contribute to proliferation, differentiation, morphogenesis and tissue homeostasis in different contexts. Aberrant EYA levels or activity are associated with numerous syndromic and non-syndromic developmental disorders, as well as cancers. Commensurate with the multiplicity of biochemical activities carried out by the EYA proteins, they impact upon a range of cellular signaling pathways. Here, we provide a broad overview of the roles played by EYA proteins in development, and highlight the molecular signaling pathways known to be linked with EYA-associated organ development and developmental disorders.
- Published
- 2021
37. Tumor cell apoptosis mediated by the orexins
- Author
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A. S. Diatlova, N. S. Novikova, K. Z. Derevtsova, and E. A. Korneva
- Subjects
0301 basic medicine ,orexin receptors ,antitumor effect ,tumor cells ,Immunology ,orexins b ,Protein tyrosine phosphatase ,orexins a ,Calcium in biology ,03 medical and health sciences ,0302 clinical medicine ,Immunology and Allergy ,Receptor ,TRPC ,G protein-coupled receptor ,Chemistry ,Endoplasmic reticulum ,RC581-607 ,Orexin receptor ,Orexin ,Cell biology ,orexin-induced apoptosis ,030104 developmental biology ,nervous system ,030220 oncology & carcinogenesis ,Immunologic diseases. Allergy - Abstract
Orexins A and B are neuropeptides synthesized by a population of lateral hypothalamic neurons. Orexin’s physiological function consists mainly in regulating the sleep-wake cycle, eating behavior, and energy homeostasis. Axons of orexin-containing neurons are projected onto many structures of brain and spinal cord, thus providing a variety of their physiological effects. Moreover, the components of the orexinergic system are identified in various peripheral organs and tissues. The effects of orexins are mediated via two receptors (OX1R and OX2R) coupled with G-proteins (GPCRs). The classical signal transmission pathway through orexin receptors in neuronal cells includes an increase of the intracellular calcium as a result of the opening of TRPC membrane channels and IP3 endoplasmic reticulum (ER) channels. In addition to the classic orexin receptors signaling, there is an alternative pathway. Signal transmission through the alternative pathway leads to apoptosis of tumor cells. This pathway is probably due to the structural feature of orexin receptors compared to other GPCRs — the presence of a tyrosine-based immunoreceptor inhibition motif (ITIM). Such motifs are not limited to GPCRs, but are a hallmark of immuno-inhibiting receptors on lymphoid and myeloid cells. ITIM recruits either SHP1 and SHP2 protein tyrosine phosphatases or SHIP1 and SHIP2 inositol phosphatases, to mediate negative signal transduction. A further mechanism of the so-called orexin-induced apoptosis seems to include the p38/MAPK phosphorylation and the cytochrome c releasing from mitochondria, followed by activation of caspases 3 and 7 and cell death. It should be emphasized that this alternative pathway is present only in certain types of tumor cells. This review summarizes the available data on orexin-induced apoptosis of tumor cells from intestines, pancreas, stomach, prostate, endometrium, adrenal glands and glia, and also considers possible mechanisms for its implementation.
- Published
- 2021
38. miR-16-5p Regulates PTPN4 and Affects Cardiomyocyte Apoptosis and Autophagy Induced by Hypoxia/Reoxygenation
- Author
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Qiao Wang, Jing-Lan Liu, Zhanqing Zhao, and Zheng Cao
- Subjects
0301 basic medicine ,Gene knockdown ,Reporter gene ,TUNEL assay ,Article Subject ,medicine.diagnostic_test ,Chemistry ,Autophagy ,Protein tyrosine phosphatase ,030204 cardiovascular system & hematology ,medicine.disease ,Molecular biology ,Flow cytometry ,Other systems of medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Complementary and alternative medicine ,Apoptosis ,medicine ,Cell damage ,RZ201-999 ,Research Article - Abstract
Objectives. To explore the effects of miR-16-5p and PTPN4 on the apoptosis and autophagy of AC16 cardiomyocytes after hypoxia/reoxygenation treatment. Methods. AC16 cells were divided into the control group (NC), hypoxia/reoxygenation group (H/R), knockdown miR-16-5p negative control group (NC inhibitor), knockdown miR-16-5p group (miR-16-5p inhibitor), overexpression miR-16-5p negative control group (NC mimics), overexpression miR-16-5p group (miR-16-5p mimics), silent PTPN4 negative control group (sh-NC), silent PTPN4 group (sh-PTPN4), and silent PTPN4 + knockdown miR-16-5p group (sh-PTPN4 + miR-16-5p inhibitor). Real-time fluorescent quantitative PCR (RT-qPCR) and western blotting (WB) were used to measure the expression level of miR-16-3p, miR-16-5p, protein tyrosine phosphatase nonreceptor type 4 (PTPN4), and autophagy-related proteins (beclin-1, LC3 II/I, and P26) in AC16 cells. The apoptosis level of AC16 cells in each group was measured by flow cytometry and TUNEL. The dual-luciferase reporter gene experiment was also used to verify the targeting relationship between miR-16-5p and PTPN4. Results. After H/R treatment, the levels of myocardial injury markers including LDH and CK-MB in AC16 cells were increased significantly ( P < 0.05 ), and the levels of cell apoptosis and autophagy also increased significantly ( P < 0.05 ). The level of miR-16-3p in AC16 cells did not change significantly after H/R treatment, whereas the level of miR-16-5p was increased significantly ( P < 0.05 ). After miR-16-5p was knocked down, the levels of LDH and CK-MB in AC16 cells treated with H/R were significantly reduced ( P < 0.05 ), and the rates of cell apoptosis and autophagy were also significantly reduced ( P < 0.05 ). miR-16-5p negatively regulated the expression level of PTPN4 protein in AC16 cells ( P < 0.05 ), and the dual-luciferase reporter gene experiment confirmed that PTPN4 was the downstream target of miR-16-5p. Silencing of PTPN4 significantly increased the damage of AC16 cells induced by H/R treatment ( P < 0.05 ), but simultaneously inhibiting the expression of PTPN4 and miR-16-5p reversed the protective effect of miR-16-5p knockdown on AC16 cells ( P < 0.05 ). Conclusions. The expression of miR-16-5p is upregulated in AC16 cells after H/R treatment and the knockdown which can protect AC16 cells from H/R-induced cell damage that may be due to its regulation on the expression of PTPN4.
- Published
- 2021
39. Cross the Undruggable Barrier, the Development of SHP2 Inhibitors: From Catalytic Site Inhibitors to Allosteric Inhibitors
- Author
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Yaping Xu, Yu Guo, Xiaowu Dong, and Jianjun Zhang
- Subjects
Biochemistry ,Chemistry ,Allosteric regulation ,medicine ,Cancer ,General Chemistry ,Protein tyrosine phosphatase ,medicine.disease ,Catalysis - Published
- 2021
40. Aberrant Expression of PTPN-14 and Wilms’ Tumor 1 as Putative Biomarker for Locoregional Recurrence in Oral Squamous Cell Carcinoma
- Author
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Seema Nayak, Madan Lal Brahma Bhatt, Divya Mehrotra, Abbas Ali Mahdi, Anupam Mishra, Seema Gupta, and Madhu Mati Goel
- Subjects
0301 basic medicine ,recurrence ,wt-1 ,Protein tyrosine phosphatase ,oscc ,Metastasis ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,law ,medicine ,General Materials Science ,Stage (cooking) ,RC254-282 ,Polymerase chain reaction ,biology ,business.industry ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Wilms' tumor ,medicine.disease ,stomatognathic diseases ,030104 developmental biology ,030220 oncology & carcinogenesis ,immunohistochemistry ,biology.protein ,Cancer research ,biomarker ,Biomarker (medicine) ,Immunohistochemistry ,Antibody ,business ,ptpn-14 - Abstract
Objective Locoregional recurrence in oral squamous cell carcinoma (OSCC) is a major concern that leads to metastasis. Its detection at earliest stage is very important to increase the overall survival of the patient. There is no any biomarker for locoregional recurrence in oral squamous cell carcinoma (OSCC). The aim of this study was to find a biomarker for locoregional recurrence in tissue and serum at gene and protein level. Methods This work studied the expression of protein tyrosine phosphatase nonreceptor type 14 (PTPN-14) and Wilms’ tumor 1 (WT-1) in patients and correlated their expression with locoregional recurrence and survival. Tissue expression was observed in formalin fixed tissue biopsies of 96 OSCC and 32 healthy controls by immunohistochemistry using antibody against PTPN-14 and WT-1 and serum level was estimated by enzyme-linked immunosorbent assay in pre- and post-chemoradiotherapy samples. mRNA expression was determined by using real-time polymerase chain reaction. Patients were followed for 3 years for locoregional recurrence. Results Expression of PTPN-14 and WT-1 in OSCC was upregulated (aberrant) in tissue and sera in both gene and protein level as compared with healthy controls. Locoregional recurrence was observed in 10 (23.80%) patients and significantly associated with PTPN-14 (p < 0.047) and WT-1 expression (p < 0.031). Conclusion PTPN-14 and WT-1 may be used as biomarker to identify patients for higher risk of locoregional recurrence. This study drove molecular aspect and phenotypic level to derive new emergent strategies in future for recurrent OSCC.
- Published
- 2021
41. Lateralized overgrowth with vascular malformation caused by a somatic PTPN11 pathogenic variant: Another piece added to the puzzle of mosaic RASopathies
- Author
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Alessandro Mussa, Antonella Turchiano, Simona Cardaropoli, Paola Coppo, Antonino Pantaleo, Rosanna Bagnulo, Carlotta Ranieri, Matteo Iacoviello, Antonella Garganese, Alessandro Stella, Stefano Gabriele Vallero, Daniele Bertin, Federica Santoro, Diana Carli, Giovanni Battista Ferrero, and Nicoletta Resta
- Subjects
Cancer Research ,Genotype ,Class I Phosphatidylinositol 3-Kinases ,Vascular Malformations ,Protein Tyrosine Phosphatase, Non-Receptor Type 11 ,FGFR1 ,PTPN11 ,RASopathies ,astrocytoma ,mosaicism ,overgrowth ,Humans ,Mutation ,Phenotype ,Astrocytoma ,Non-Receptor Type 11 ,Genetics ,Protein Tyrosine Phosphatase - Abstract
Lateralized/segmental overgrowth disorders (LOs) encompass a heterogeneous group of congenital conditions with excessive body tissue growth. Documented molecular alterations in LOs mostly consist of somatic variants in genes of the PI3KCA/AKT/mTOR pathway or of chromosome band 11p15.5 imprinted region anomalies. In some cases, somatic pathogenic variants in genes of the RAS/MAPK pathway have been reported. We present the first case of a somatic pathogenic variant (T507K) in PTPN11 causing a LO phenotype characterized by severe lateralized overgrowth, vascular proliferation, and cerebral astrocytoma. The T507K variant was detected in DNA from overgrown tissue in a leg with capillary malformation. The astrocytoma tissue showed a higher PTPN11 variant allele frequency. A pathogenic variant in FGFR1 was also found in tumor tissue, representing a second hit on the RAS/MAPK pathway. These findings indicate that RAS/MAPK cascade overactivation can cause mosaic overgrowth phenotypes resembling PIK3CA-related overgrowth disorders (PROS) with cancer predisposition and are consistent with the hypothesis that RAS/MAPK hyperactivation can be involved in the pathogenesis of astrocytoma. This observation raises the issue of cancer predisposition in patients with RAS/MAPK pathway gene variants and expands genotype spectrum of LOs and the treatment options for similar cases through inhibition of the RAS/MAPK oversignaling.
- Published
- 2022
42. A Plasmodium falciparum protein tyrosine phosphatase inhibitor identified from the ChEMBL‐NTD database blocks parasite growth
- Author
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Dinesh Gupta, Rajan Pandey, Pawan Malhotra, Priya Gupta, and Asif Mohmmed
- Subjects
0301 basic medicine ,QH301-705.5 ,Plasmodium falciparum ,Phosphatase ,Protein tyrosine phosphatase ,inhibition assay ,General Biochemistry, Genetics and Molecular Biology ,phosphatase ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,law ,parasitic diseases ,Animals ,Parasite hosting ,Parasites ,post‐translational modifications ,Biology (General) ,Tyrosine ,Research Articles ,Biological Phenomena ,biology ,Chemistry ,biology.organism_classification ,In vitro ,030104 developmental biology ,plasmodium ,Biochemistry ,030220 oncology & carcinogenesis ,Recombinant DNA ,enzymatic assay ,Heterologous expression ,Protein Tyrosine Phosphatases ,Research Article - Abstract
Post‐translational modifications, especially reversible phosphorylation, are among the most common mechanisms that regulate protein function and biological processes in Plasmodium species. Of the Plasmodium phosphatases, phosphatase of regenerating liver (PfPRL) is secreted and is an essential phosphatase. Here, we expressed PfPRL in a heterologous expression system, and then purified and characterized its phosphatase activity. We found that Novartis_003209, a previously identified inhibitor, inhibited the PfPRL phosphatase activity of recombinant PfPRL and blocked in vitro parasite growth in a dose‐dependent manner. Further, in silico docking analysis of Novartis_003209 with all four P. falciparum tyrosine phosphatases (PTP) demonstrated that Novartis_003209 is a Plasmodium PTP inhibitor. Overall, our results identify a scaffold as a potential starting point to design a PTP‐specific inhibitor., Plasmodium PRL is a secreted protein tyrosine phosphatase and is essential for parasite survival. Our study shows that Novartis_003209 inhibits recombinant PfPRL phosphatase activity and in vitro parasite growth in a dose‐dependent manner. Further, in silico docking studies with four P. falciparum tyrosine phosphatases suggest that the identified molecule could be a general plasmodium tyrosine phosphatase inhibitor.
- Published
- 2021
43. Protein tyrosine phosphatase receptor type C (PTPRC or CD45)
- Author
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Ahlam A. Ali, Mary Frances McMullin, Ken I. Mills, and Maryam Ahmed Al Barashdi
- Subjects
0301 basic medicine ,Cell type ,Phosphatase ,Cell ,Protein tyrosine phosphatase ,Biology ,PTPRC ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Innate immune system ,hematology ,leukemia ,General Medicine ,Cell biology ,myeloproliferative disorders ,Haematopoiesis ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,biology.protein ,Leukocyte Common Antigens ,Molecules in Pathogenesis ,myeloid ,Tyrosine kinase - Abstract
The leucocyte common antigen, protein tyrosine phosphatase receptor type C (PTPRC), also known as CD45, is a transmembrane glycoprotein, expressed on almost all haematopoietic cells except for mature erythrocytes, and is an essential regulator of T and B cell antigen receptor-mediated activation. Disruption of the equilibrium between protein tyrosine kinase and phosphatase activity (from CD45 and others) can result in immunodeficiency, autoimmunity, or malignancy. CD45 is normally present on the cell surface, therefore it works upstream of a large signalling network which differs between cell types, and thus the effects of CD45 on these cells are also different. However, it is becoming clear that CD45 plays an essential role in the innate immune system and this is likely to be a key area for future research. In this review of PTPRC (CD45), its structure and biological activities as well as abnormal expression of CD45 in leukaemia and lymphoma will be discussed.
- Published
- 2021
44. Enhancement of Endothelialization by Topographical Features Is Mediated by PTP1B-Dependent Endothelial Adherens Junctions Remodeling
- Author
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Yusuke Toyama, Yi-Chin Toh, Pakorn Kanchanawong, Hui Ting Ong, Azita Gorji, and Pearlyn Jia Ying Toh
- Subjects
Chemistry ,Collective cell migration ,0206 medical engineering ,Combined use ,Biomedical Engineering ,Regulator ,Endothelial Cells ,Adherens Junctions ,02 engineering and technology ,Protein tyrosine phosphatase ,021001 nanoscience & nanotechnology ,020601 biomedical engineering ,Cell Line ,Cell biology ,Biomaterials ,Adherens junction ,Crosstalk (biology) ,Cell Movement ,Endothelium, Vascular ,VE-cadherin ,0210 nano-technology ,Vascular graft - Abstract
Endothelial Cells (ECs) form cohesive cellular lining of the vasculature and play essential roles in both developmental processes and pathological conditions. Collective migration and proliferation of endothelial cells (ECs) are key processes underlying endothelialization of vessels as well as vascular graft, but the complex interplay of mechanical and biochemical signals regulating these processes are still not fully elucidated. While surface topography and biochemical modifications have been used to enhance endothelialization in vitro, thus far such single-modality modifications have met with limited success. As combination therapy that utilizes multiple modalities has shown improvement in addressing various intractable and complex biomedical conditions, here, we explore a combined strategy that utilizes topographical features in conjunction with pharmacological perturbations. We characterized EC behaviors in response to micrometer-scale grating topography in concert with pharmacological perturbations of endothelial adherens junctions (EAJ) regulators. We found that the protein tyrosine phosphatase, PTP1B, serves as a potent regulator of EAJ stability, with PTP1B inhibition synergizing with grating topographies to modulate EAJ rearrangement, thereby augmenting global EC monolayer sheet orientation, proliferation, connectivity, and collective cell migration. Our data delineates the crosstalk between cell-ECM topography sensing and cell-cell junction integrity maintenance and suggests that the combined use of grating topography and PTP1B inhibitor could be a promising strategy for promoting collective EC migration and proliferation.
- Published
- 2021
45. A small molecule inhibitor targeting SHP2 mutations for the lung carcinoma
- Author
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Zhiqiang Zhang, Jinhao Zeng, Qing Nian, Liyun Zhao, Xuanlin Feng, Fernando Rodrigues-Lima, Li He, Jianyou Shi, and Yu Chen
- Subjects
MAPK/ERK pathway ,Kinase ,Chemistry ,02 engineering and technology ,General Chemistry ,Protein tyrosine phosphatase ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Cancer research ,Signal transduction ,0210 nano-technology ,Protein kinase A ,Janus kinase ,Protein kinase B ,Proto-oncogene tyrosine-protein kinase Src - Abstract
The RAS/mitogen-activated protein kinase (MAPK) pathway disorder induced by the missense mutations in the tyrosine-protein phosphatase non-receptor type 11 (PTPN11) gene which resulted in the non-receptor protein tyrosine phosphatase SHP2 dysfunction has been reported in many lung cancer cases. Moreover, the Src homology region 2 (SH2)-containing protein tyrosine phosphatase 2 (SHP2) mutation or deletion triggers multiple signaling pathway dysfunctions including RAS/MAPK, RAS/extracellular-signal-regulated kinase (ERK), phosphatidylinositol 3-kinase (PI3K)/protein kinase B (AKT), Janus kinase/signal transducers and activators of transcription (JAK/STAT) and Hippo/yes-associated protein (YAP) which affect the expression of growth factors, cytokines and hormones. In recent years, the developing of the small molecule SHP2 inhibitors received a lot of attention. In this review, we summarize the recent years’ progresses of the SHP2 inhibitors development for the lung cancer treatment.
- Published
- 2021
46. Trodusquemine: Potential Utility in Wound Regeneration
- Author
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Fadi Salameh and Zaid H. Khoury
- Subjects
biology ,business.industry ,Regeneration (biology) ,Biomedical Engineering ,Medicine (miscellaneous) ,Context (language use) ,Cell Biology ,Protein tyrosine phosphatase ,Regenerative medicine ,Receptor tyrosine kinase ,Cell biology ,Biomaterials ,Trodusquemine ,biology.protein ,Poor wound healing ,Medicine ,business ,Wound healing - Abstract
This manuscript reviews the current state of research on the regenerative properties of trodusquemine, a promising naturally occurring compound with the potential to be employed to regenerate skin and mucosal wounds, particularly when the wound healing capacity is diminished. The skin and mucous membranes lining body cavities differ in their intrinsic regenerative potential, which can be further modified by local and systemic biomedical factors that ultimately delay the natural course of wound healing, leading to increased morbidity. Non-receptor type 1 protein tyrosine phosphatase (PTP1B), the target of trodusquemine, was found to be overexpressed in the setting of uncontrolled diabetes mellitus mediating poor wound healing responses. PTP1B inhibition was shown to decrease inflammation and enhance angiogenesis, promoting wound regeneration in the context of diabetes. Trodusquemine has demonstrated phenomenal ability in regenerating various tissues in vivo through the inhibition of PTP1B, eliminating the disruptive dephosphorylation of receptor tyrosine kinases, allowing transmission of tissue regenerative signals to the nucleus, and ultimately the regrowth of damaged tissue. Further evidence in the form of well-controlled in vitro and in vivo studies to evaluate the role of PTP1B in the wound healing cascade is mandated. Trodusquemine-mediated inhibition of PTP1B may potentially revolutionize regenerative medicine and dentistry particularly in the setting of diminished wound healing responses. Trodusquemine is currently the sole small molecule with mammalian tissue regenerative potential that proved to be safely tolerated in humans. Trodusquemine acts through the inhibition of an enzyme, namely, non-receptor type 1 protein tyrosine phosphatase, allowing for tissue regeneration. When the tissue is wounded under most ordinary circumstances, this aforementioned enzyme regulates cellular growth by terminating the signaling pathway responsible for tissue regrowth in an attempt to prevent uncontrolled cellular proliferation at sites of injury, which in turn encourages healing by scar formation.
- Published
- 2021
47. Discovery of Orally Bioavailable Purine-Based Inhibitors of the Low-Molecular-Weight Protein Tyrosine Phosphatase
- Author
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Stephanie M. Stanford, Robert Ardecky, Zachary J. Holmes, Michael P Hedrick, Socorro Rodiles, Michael A. Diaz, April Guan, Tiffany P Nguyen, Stefan Grotegut, Jiwen Zou, Michael R. Jackson, Nunzio Bottini, Thomas D.Y. Chung, Eugenio Santelli, Anthony B. Pinkerton, and Tarmo Roosild
- Subjects
Purine ,Drug Evaluation, Preclinical ,Administration, Oral ,Type 2 diabetes ,Protein tyrosine phosphatase ,Molecular Dynamics Simulation ,Crystallography, X-Ray ,01 natural sciences ,Article ,Structure-Activity Relationship ,03 medical and health sciences ,chemistry.chemical_compound ,Insulin resistance ,Diabetes mellitus ,Drug Discovery ,medicine ,Animals ,Humans ,Obesity ,Enzyme Inhibitors ,Phosphorylation ,Binding site ,030304 developmental biology ,0303 health sciences ,Binding Sites ,biology ,medicine.disease ,0104 chemical sciences ,Disease Models, Animal ,Kinetics ,010404 medicinal & biomolecular chemistry ,Insulin receptor ,Diabetes Mellitus, Type 2 ,chemistry ,Biochemistry ,Purines ,biology.protein ,Molecular Medicine ,Insulin Resistance ,Protein Tyrosine Phosphatases ,Proto-Oncogene Proteins c-akt ,Half-Life ,Signal Transduction - Abstract
Obesity-associated insulin resistance plays a central role in the pathogenesis of type 2 diabetes. A promising approach to decrease insulin resistance in obesity is to inhibit the protein tyrosine phosphatases that negatively regulate insulin receptor signaling. The low-molecular-weight protein tyrosine phosphatase (LMPTP) acts as a critical promoter of insulin resistance in obesity by inhibiting phosphorylation of the liver insulin receptor activation motif. Here, we report development of a novel purine-based chemical series of LMPTP inhibitors. These compounds inhibit LMPTP with an uncompetitive mechanism and are highly selective for LMPTP over other protein tyrosine phosphatases. We also report the generation of a highly orally bioavailable purine-based analogue that reverses obesity-induced diabetes in mice.
- Published
- 2021
48. Protein tyrosine phosphatase receptor type D gene promotes radiosensitivity via STAT3 dephosphorylation in nasopharyngeal carcinoma
- Author
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Kaifan Yang, Yuting Chen, Longmei Cai, Yingtong Zhou, Lingzhi Wang, Dehua Wu, Yujiang Li, Xiaohan Zhou, Wenxiao Luo, Jinrong Liao, Yanling Lin, Yiming Lei, and Yanting Zhang
- Subjects
STAT3 Transcription Factor ,0301 basic medicine ,Cancer Research ,ATG5 ,Protein tyrosine phosphatase ,Biology ,Article ,Dephosphorylation ,Prognostic markers ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,otorhinolaryngologic diseases ,Genetics ,medicine ,Humans ,Radiosensitivity ,STAT3 ,Molecular Biology ,Nasopharyngeal Carcinoma ,Radiotherapy ,Microarray analysis techniques ,Autophagy ,medicine.disease ,Gene Expression Regulation, Neoplastic ,stomatognathic diseases ,MicroRNAs ,030104 developmental biology ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Cancer research ,biology.protein - Abstract
Radiotherapy is essential to the treatment of nasopharyngeal carcinoma (NPC) and acquired or innate resistance to this therapeutic modality is a major clinical problem. However, the underlying molecular mechanisms in the radiation resistance in NPC are not fully understood. Here, we reanalyzed the microarray data from public databases and identified the protein tyrosine phosphatase receptor type D (PTPRD) as a candidate gene. We found that PTPRD was downregulated in clinical NPC tissues and NPC cell lines with its promoter hypermethylated. Functional assays revealed that PTPRD overexpression sensitized NPC to radiation in vitro and in vivo. Importantly, miR-454-3p directly targets PTPRD to inhibit its expression and biological effect. Interestingly, mechanistic analyses indicate that PTPRD directly dephosphorylates STAT3 to enhance Autophagy-Related 5 (ATG5) transcription, resulting in triggering radiation-induced autophagy. The immunohistochemical staining of 107 NPC revealed that low PTPRD and high p-STAT3 levels predicted poor clinical outcome. Overall, we showed that PTPRD promotes radiosensitivity by triggering radiation-induced autophagy via the dephosphorylation of STAT3, thus providing a potentially useful predictive biomarker for NPC radiosensitivity and drug target for NPC radiosensitization.
- Published
- 2021
49. Proteoglycans regulate protein tyrosine phosphatase receptor σ organization on hematopoietic stem/progenitor cells
- Author
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Destiny M. Batton, Amara Pang, Christina M. Termini, and John P. Chute
- Subjects
0301 basic medicine ,Nervous system ,Cancer Research ,Protein tyrosine phosphatase ,03 medical and health sciences ,0302 clinical medicine ,Genetics ,medicine ,Animals ,Progenitor cell ,Receptor ,Molecular Biology ,Cells, Cultured ,Chemistry ,Regeneration (biology) ,Receptor-Like Protein Tyrosine Phosphatases, Class 2 ,Cell Biology ,Hematology ,Hematopoietic Stem Cells ,Cell biology ,Mice, Inbred C57BL ,Cytoskeletal Proteins ,Haematopoiesis ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Proteoglycans ,Syndecan-2 ,Stem cell ,Function (biology) - Abstract
Protein tyrosine phosphatase receptor σ (PTPσ) is highly expressed by murine and human hematopoietic stem cells (HSCs) and negatively regulates HSC self-renewal and regeneration. Previous studies of the nervous system suggest that heparan sulfate proteoglycans can inactivate PTPσ by clustering PTPσ receptors on neurons, but this finding has yet to be visually verified with adequate resolution. Here, we sought to visualize and quantify how heparan sulfate proteoglycans regulate the organization and activation of PTPσ in hematopoietic stem/progenitor cells (HSPCs). Our study illustrates that syndecan-2 promotes PTPσ clustering, which sustains phospho-tyrosine and phospho-ezrin levels in association with augmentation of hematopoietic colony formation. Strategies that promote clustering of PTPσ on HSPCs may serve to powerfully augment hematopoietic function.
- Published
- 2021
50. Condition-dependent functional shift of two Drosophila Mtmr lipid phosphatases in autophagy control
- Author
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Miklós Erdélyi, Petra Pilz, Tibor Kovács, Miklós Sass, Henrik Mihály Szaker, Viktor Billes, George Csikos, Kinga Tagscherer, Tibor Vellai, Anna Manzéger, Tamas Lukacsovich, Regina Kméczik, and Péter Lőrincz
- Subjects
0301 basic medicine ,Myotubularin ,Phosphatase ,UVRAG ,Protein tyrosine phosphatase ,Biology ,Phosphatidylinositols ,Syntaxin 17 ,03 medical and health sciences ,PIKFYVE ,Autophagy ,Animals ,Drosophila Proteins ,Molecular Biology ,Mammals ,030102 biochemistry & molecular biology ,Kinase ,edtp ,mtmr6 ,myotubularins ,phosphoinositides ,Cell Biology ,Cell biology ,030104 developmental biology ,Drosophila ,Protein Tyrosine Phosphatases ,Lysosomes ,Research Article ,Research Paper - Abstract
Myotubularin (MTM) and myotubularin-related (MTMR) lipid phosphatases catalyze the removal of a phosphate group from certain phosphatidylinositol derivatives. Because some of these substrates are required for macroautophagy/autophagy, during which unwanted cytoplasmic constituents are delivered into lysosomes for degradation, MTM and MTMRs function as important regulators of the autophagic process. Despite its physiological and medical significance, the specific role of individual MTMR paralogs in autophagy control remains largely unexplored. Here we examined two Drosophila MTMRs, EDTP and Mtmr6, the fly orthologs of mammalian MTMR14 and MTMR6 to MTMR8, respectively, and found that these enzymes affect the autophagic process in a complex, condition-dependent way. EDTP inhibited basal autophagy, but did not influence stress-induced autophagy. In contrast, Mtmr6 promoted the process under nutrient-rich settings, but effectively blocked its hyperactivation in response to stress. Thus, Mtmr6 is the first identified MTMR phosphatase with dual, antagonistic roles in the regulation of autophagy, and shows conditional antagonism/synergism with EDTP in modulating autophagic breakdown. These results provide a deeper insight into the adjustment of autophagy. Abbreviations: Atg, autophagy-related; BDSC, Bloomington Drosophila Stock Center; DGRC, Drosophila Genetic Resource Center; EDTP, Egg-derived tyrosine phosphatase; FYVE, zinc finger domain from Fab1 (yeast ortholog of PIKfyve), YOTB, Vac1 (vesicle transport protein) and EEA1 cysteine-rich proteins; LTR, LysoTracker Red; MTM, myotubularin; MTMR, myotubularin-related; PI, phosphatidylinositol; Pi3K59F, Phosphotidylinositol 3 kinase 59F; PtdIns3P, phosphatidylinositol-3-phosphate; PtdIns(3,5)P2, phosphatidylinositol-3,5-bisphosphate; PtdIns5P, phosphatidylinositol-5-phosphate; ref(2)P, refractory to sigma P; Syx17, Syntaxin 17; TEM, transmission electron microscopy; UAS, upstream activating sequence; Uvrag, UV-resistance associated gene; VDRC, Vienna Drosophila RNAi Center; Vps34, Vacuolar protein sorting 34.
- Published
- 2021
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