16 results on '"Michel W. Jaworek"'
Search Results
2. High pressure treatment promotes the deteriorating effect of cationic antimicrobial peptides on bacterial membranes
- Author
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Simon Kriegler, Michel W. Jaworek, Rosario Oliva, and Roland Winter
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General Physics and Astronomy ,Physical and Theoretical Chemistry - Abstract
High pressure increases the propensity of cationic antimicrobial peptides to form active helical structures on bacterial membranes, indicating that high-pressure could boost cAMP activity in high-pressure food processing.
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- 2023
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3. Life in Multi-Extreme Environments: Brines, Osmotic and Hydrostatic Pressure─A Physicochemical View
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Jim-Marcel Knop, Sanjib Mukherjee, Michel W. Jaworek, Simon Kriegler, Magiliny Manisegaran, Zamira Fetahaj, Lena Ostermeier, Rosario Oliva, Stewart Gault, Charles S. Cockell, Roland Winter, Knop, Jim-Marcel, Mukherjee, Sanjib, Jaworek, Michel W, Kriegler, Simon, Manisegaran, Magiliny, Fetahaj, Zamira, Ostermeier, Lena, Oliva, Rosario, Gault, Stewart, Cockell, Charles S, and Winter, Roland
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General Chemistry - Abstract
Elucidating the details of the formation, stability, interactions, and reactivity of biomolecular systems under extreme environmental conditions, including high salt concentrations in brines and high osmotic and high hydrostatic pressures, is of fundamental biological, astrobiological, and biotechnological importance. Bacteria and archaea are able to survive in the deep ocean or subsurface of Earth, where pressures of up to 1 kbar are reached. The deep subsurface of Mars may host high concentrations of ions in brines, such as perchlorates, but we know little about how these conditions and the resulting osmotic stress conditions would affect the habitability of such environments for cellular life. We discuss the combined effects of osmotic (salts, organic cosolvents) and hydrostatic pressures on the structure, stability, and reactivity of biomolecular systems, including membranes, proteins, and nucleic acids. To this end, a variety of biophysical techniques have been applied, including calorimetry, UV/vis, FTIR and fluorescence spectroscopy, and neutron and X-ray scattering, in conjunction with high pressure techniques. Knowledge of these effects is essential to our understanding of life exposed to such harsh conditions, and of the physical limits of life in general. Finally, we discuss strategies that not only help us understand the adaptive mechanisms of organisms that thrive in such harsh geological settings but could also have important ramifications in biotechnological and pharmaceutical applications.
- Published
- 2022
4. Cover Feature: Suppression of Liquid‐Liquid Phase Separation and Aggregation of Antibodies by Modest Pressure Application (Chem. Eur. J. 48/2022)
- Author
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Zamira Fetahaj, Michel W. Jaworek, Rosario Oliva, and Roland Winter
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Organic Chemistry ,General Chemistry ,Catalysis - Published
- 2022
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5. Suppression of Liquid-Liquid Phase Separation and Aggregation of Antibodies by Modest Pressure Application
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Zamira Fetahaj, Michel W. Jaworek, Rosario Oliva, Roland Winter, Fetahaj, Zamira, Jaworek, Michel W, Oliva, Rosario, and Winter, Roland
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Excipients ,excipient ,high pressure ,antibodie ,Organic Chemistry ,protein condensate ,General Chemistry ,liquid-liquid phase separation ,Catalysis ,Antibodies - Abstract
The high colloidal stability of antibody (immunoglobulin) solutions is important for pharmaceutical applications. Inert cosolutes, excipients, are generally used in therapeutic protein formulations to minimize physical instabilities, such as liquid-liquid phase separation (LLPS), aggregation and precipitation, which are often encountered during manufacturing and storage. Despite their widespread use, a detailed understanding of how excipients modulate the specific protein-protein interactions responsible for these instabilities is still lacking. In this work, we demonstrate the high sensitivity to pressure of globulin condensates as a suitable means to suppress LLPS and subsequent aggregation of concentrated antibody solutions. The addition of excipients has only a minor effect. The high pressure sensitivity observed is due to the fact that these flexible Y-shaped molecules create a considerable amount of void volume in the condensed phase, leading to an overall decrease in the volume of the system upon dissociation of the droplet phase by pressure already at a few tens of to hundred bar. Moreover, we show that immunoglobulin molecules themselves are highly resistant to unfolding under pressure, and can even sustain pressures up to about 6 kbar without conformational changes. This implies that immunoglobulins are resistant to the pressure treatment of foods, such as milk, in high-pressure food-processing technologies, thereby preserving their immunological activity.
- Published
- 2022
6. Stability of the chaperonin system GroEL–GroES under extreme environmental conditions
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Simone Möbitz, Mimi Gao, Michel W. Jaworek, and Roland Winter
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0303 health sciences ,Protein Stability ,Chemistry ,Temperature ,General Physics and Astronomy ,Structural integrity ,Chaperonin 60 ,GroES ,Environment ,010402 general chemistry ,01 natural sciences ,GroEL ,0104 chemical sciences ,Chaperonin ,Folding (chemistry) ,Pressure range ,03 medical and health sciences ,chemistry.chemical_compound ,Monomer ,Chaperonin 10 ,Pressure ,Biophysics ,Physical and Theoretical Chemistry ,030304 developmental biology ,Bar (unit) - Abstract
The chaperonin system GroEL-GroES is present in all kingdoms of life and rescues proteins from improper folding and aggregation upon internal and external stress conditions, including high temperatures and pressures. Here, we set out to explore the thermo- and piezostability of GroEL, GroES and the GroEL-GroES complex in the presence of cosolvents, nucleotides and salts employing quantitative FTIR spectroscopy and small-angle X-ray scattering. Owing to its high biological relevance and lack of data, our focus was especially on the effect of pressure on the chaperonin system. The experimental results reveal that the GroEL-GroES complex is remarkably temperature stable with an unfolding temperature beyond 70 °C, which can still be slightly increased by compatible cosolutes like TMAO. Conversely, the pressure stability of GroEL and hence the GroEL-GroES complex is rather limited and much less than that of monomeric proteins. Whereas GroES is pressure stable up to ∼5 kbar, GroEl and the GroEl-GroES complex undergo minor structural changes already beyond 1 kbar, which can be attributed to a dissociation-induced conformational drift. Quite unexpectedly, no significant unfolding of GroEL is observed even up to 10 kbar, however, i.e., the subunits themselves are very pressure stable. As for the physiological relevance, the structural integrity of the chaperonin system is retained in a relatively narrow pressure range, from about 1 to 1000 bar, which is just the pressure range encountered by life on Earth.
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- 2020
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7. Cosolvent and Crowding Effects on the Temperature‐ and Pressure‐Dependent Dissociation Process of the α/β‐Tubulin Heterodimer
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Roland Winter, Michel W. Jaworek, Paul Hendrik Schummel, and Christian Anders
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biology ,Chemistry ,Enthalpy ,02 engineering and technology ,Calorimetry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Fluorescence ,Atomic and Molecular Physics, and Optics ,Dissociation (chemistry) ,0104 chemical sciences ,Tubulin ,Microtubule ,Biophysics ,biology.protein ,Physical and Theoretical Chemistry ,0210 nano-technology ,Cytoskeleton ,Fluorescence anisotropy - Abstract
Tubulin is one of the main components of the cytoskeleton of eukaryotic cells. The formation of microtubules depends strongly on environmental and solution conditions, and has been found to be among the most pressure sensitive processes in vivo. We explored the effects of different types of cosolvents, such as trimethylamine-N-oxide (TMAO), sucrose and urea, and crowding agents to mimic cell-like conditions, on the temperature and pressure stability of the building block of microtubules, i. e. the α/β-tubulin heterodimer. To this end, fluorescence and FTIR spectroscopy, differential scanning and pressure perturbation calorimetry as well as fluorescence anisotropy and correlation spectroscopies were applied. The pressure and temperature of dissociation of α/β-tubulin as well as the underlying thermodynamic parameters upon dissociation, such as volume and enthalpy changes, have been determined for the different solution conditions. The temperature and pressure of dissociation of the α/β-tubulin heterodimer and hence its stability increases dramatically in the presence of TMAO and the nanocrowder sucrose. We show that by adjusting the levels of compatible cosolutes and crowders, cells are able to withstand deteriorating effects of pressure even up to the kbar-range.
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- 2019
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8. Boosting the kinetic efficiency of formate dehydrogenase by combining the effects of temperature, high pressure and co-solvent mixtures
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Nicolás F. Gajardo-Parra, Roland Winter, Michel W. Jaworek, Gabriele Sadowski, and Christoph Held
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Activity coefficient ,Work (thermodynamics) ,Chemistry ,Kinetics ,Temperature ,Substrate (chemistry) ,Surfaces and Interfaces ,General Medicine ,Buffer solution ,Formate dehydrogenase ,Formate Dehydrogenases ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Chemical engineering ,Solvents ,Thermodynamics ,Enzyme kinetics ,Physical and Theoretical Chemistry ,Macromolecular crowding ,Biotechnology - Abstract
The application of co-solvents and high pressure has been shown to be an efficient means to modify the kinetics of enzyme-catalyzed reactions without compromising enzyme stability, which is often limited by temperature modulation. In this work, the high-pressure stopped-flow methodology was applied in conjunction with fast UV/Vis detection to investigate kinetic parameters of formate dehydrogenase reaction (FDH), which is used in biotechnology for cofactor recycling systems. Complementary FTIR spectroscopic and differential scanning fluorimetric studies were performed to reveal pressure and temperature effects on the structure and stability of the FDH. In neat buffer solution, the kinetic efficiency increases by one order of magnitude by increasing the temperature from 25° to 45 °C and the pressure from ambient up to the kbar range. The addition of particular co-solvents further doubled the kinetic efficiency of the reaction, in particular the compatible osmolyte trimethylamine-N-oxide and its mixtures with the macromolecular crowding agent dextran. The thermodynamic model PC-SAFT was successfully applied within a simplified activity-based Michaelis-Menten framework to predict the effects of co-solvents on the kinetic efficiency by accounting for interactions involving substrate, co-solvent, water, and FDH. Especially mixtures of the co-solvents at high concentrations were beneficial for the kinetic efficiency and for the unfolding temperature.
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- 2021
9. Exploring enzymatic activity in multiparameter space: cosolvents, macromolecular crowders and pressure
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Roland Winter and Michel W. Jaworek
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chemistry.chemical_classification ,Quinary structure ,Co-solvents ,Mechanical Engineering ,Energy Engineering and Power Technology ,Management Science and Operations Research ,Space (mathematics) ,Enzyme ,Crowding ,chemistry ,Biophysics ,Enzymology ,Pressure ,Macromolecule ,Co solvent - Abstract
The use of cosolutes and high hydrostatic pressure has been described as an efficient means to modulate the stability of enzymes and their catalytic activity. Cosolvents and pressure can lead to increased reaction rates without compromising the stability of the enzyme. Inspired by the multi-component nature of the crowded cellular milieu of biological cells of piezophiles, we studied the combined effects of macromolecular crowding agents, different types of cosolvents and pressure in concert on a hydrolysis reaction catalyzed by α-chymotrypsin. We have seen that crowding agents and cosolvents can have very diverse effects on enzymatic activity. Addition of the deep-sea osmolyte trimethylamine-N-oxide displays by far the most positive effect on the catalytic efficiency, keff, of the reaction, which is even markedly enhanced at high pressures. Addition of the chaotropic agent urea leads to the reverse effect, and PEG and dextran as two representative crowding agents of a different nature show nearly similar values for keff compared to the pure buffer data. Such information may not only be relevant for understanding life processes in extreme environments, but also for the use of enzymes in industrial processing, which often requires harsh conditions as well., ChemSystemsChem;3(2)
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- 2020
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10. High pressures increase α-chymotrypsin enzyme activity under perchlorate stress
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Charles S. Cockell, Stewart Gault, Roland Winter, and Michel W. Jaworek
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Extraterrestrial Environment ,Partial Pressure ,Inorganic chemistry ,Medicine (miscellaneous) ,Mars ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Protein Structure, Secondary ,Article ,Ion ,Stress (mechanics) ,Perchlorate ,chemistry.chemical_compound ,Stress, Physiological ,Exobiology ,Spectroscopy, Fourier Transform Infrared ,Extreme environment ,Chymotrypsin ,lcsh:QH301-705.5 ,Martian ,Perchlorates ,biology ,Dose-Response Relationship, Drug ,Temperature ,Proteins ,Mars Exploration Program ,021001 nanoscience & nanotechnology ,Enzyme assay ,0104 chemical sciences ,Enzymes ,lcsh:Biology (General) ,chemistry ,biology.protein ,0210 nano-technology ,General Agricultural and Biological Sciences - Abstract
Deep subsurface environments can harbour high concentrations of dissolved ions, yet we know little about how this shapes the conditions for life. We know even less about how the combined effects of high pressure influence the way in which ions constrain the possibilities for life. One such ion is perchlorate, which is found in extreme environments on Earth and pervasively on Mars. We investigated the interactions of high pressure and high perchlorate concentrations on enzymatic activity. We demonstrate that high pressures increase α-chymotrypsin enzyme activity even in the presence of high perchlorate concentrations. Perchlorate salts were shown to shift the folded α-chymotrypsin phase space to lower temperatures and pressures. The results presented here may suggest that high pressures increase the habitability of environments under perchlorate stress. Therefore, deep subsurface environments that combine these stressors, potentially including the subsurface of Mars, may be more habitable than previously thought., Gault et al. show that high pressures increase α-chymotrypsin enzyme activity in the presence of high perchlorate concentrations. These perchlorate salts shift the folded enzyme phase space to lower temperatures and pressure and may move the optimum enzyme activity towards lower temperatures in addition to higher pressures, which has implications for Martian habitability.
- Published
- 2020
11. On the extraordinary pressure stability of the Thermotoga maritima arginine binding protein and its folded fragments - a high-pressure FTIR spectroscopy study
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Alessia Ruggiero, Giuseppe Graziano, Luigi Vitagliano, Roland Winter, and Michel W. Jaworek
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Stereochemistry ,Protein Conformation ,Protein domain ,General Physics and Astronomy ,010402 general chemistry ,01 natural sciences ,Bacterial protein ,03 medical and health sciences ,chemistry.chemical_compound ,Protein structure ,Bacterial Proteins ,Protein Domains ,Spectroscopy, Fourier Transform Infrared ,Pressure ,Thermotoga maritima ,Amino Acid Sequence ,Physical and Theoretical Chemistry ,Fourier transform infrared spectroscopy ,Peptide sequence ,030304 developmental biology ,Sequence Deletion ,0303 health sciences ,biology ,Protein Stability ,biology.organism_classification ,0104 chemical sciences ,Monomer ,chemistry ,Arginine binding ,Carrier Proteins - Abstract
The arginine binding protein from T. maritima (ArgBP) exhibits several distinctive biophysical and structural properties. Here we show that ArgBP is also endowed with a ramarkable pressure stability as it undergoes minor structural changes only, even at 10 kbar. A similar stability is also observed for its folded fragments (truncated monomer and individual domains). A survey of literature data on the pressure stability of proteins highlights the uncommon behavior of ArgBP.
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- 2020
12. Pressure and cosolvent modulation of the catalytic activity of amyloid fibrils
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Vitor Schuabb, Roland Winter, and Michel W. Jaworek
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Amyloid ,Kinetics ,Amyloidogenic Proteins ,macromolecular substances ,02 engineering and technology ,Molecular Dynamics Simulation ,010402 general chemistry ,01 natural sciences ,Catalysis ,Methylamines ,Molecular dynamics ,Spectroscopy, Fourier Transform Infrared ,Pressure ,Materials Chemistry ,Ficoll ,Urea ,Amino Acid Sequence ,Fourier transform infrared spectroscopy ,Chemistry ,Temperature ,Metals and Alloys ,General Chemistry ,021001 nanoscience & nanotechnology ,Amyloid fibril ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Osmolyte ,Solvents ,Ceramics and Composites ,Biophysics ,Spectroscopic detection ,0210 nano-technology ,Macromolecular crowding - Abstract
We report on the effects of pressure and cosolvents on the catalytic activity of a designed amyloid fibril by applying a high-pressure stopped-flow methodology with rapid spectroscopic detection. FTIR spectroscopic data revealed a remarkable pressure and temperature stability of the fibrillar catalyst. The activity is further enhanced by osmolytes and macromolecular crowding.
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- 2018
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13. Exploring the influence of natural cosolvents on the free energy and conformational landscape of filamentous actin and microtubules
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Michel W. Jaworek, Paul Hendrik Schummel, Christopher Rosin, Roland Winter, and Jessica Högg
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0301 basic medicine ,Protein Conformation, alpha-Helical ,Enthalpy ,General Physics and Astronomy ,macromolecular substances ,Calorimetry ,010402 general chemistry ,01 natural sciences ,Filamentous actin ,Microtubules ,03 medical and health sciences ,Methylamines ,Microtubule ,Tubulin ,Pressure ,Animals ,Transition Temperature ,Urea ,Physical and Theoretical Chemistry ,Cytoskeleton ,Actin ,Protein Unfolding ,biology ,Chemistry ,Protein Stability ,Actins ,0104 chemical sciences ,030104 developmental biology ,Osmolyte ,biology.protein ,Biophysics ,Solvents ,Thermodynamics ,Cattle ,Protein Conformation, beta-Strand ,Rabbits - Abstract
Actin and tubulin, the main components of the cytoskeleton, are responsible for many different cellular functions and can be found in nearly all eukaryotic cells. The formation of filamentous actin (F-actin) as well as microtubules depends strongly on environmental and solution conditions. The self-assembly of both, actin and tubulin, has been found to be among the most pressure sensitive process in vivo. Here, we explored the effects of various types of natural cosolvents, such as urea and the osmolyte trimethylamine-N-oxide (TMAO), on the temperature- and pressure-dependent stability of their polymeric states, F-actin and microtubules. Accumulation of TMAO by deep-sea animals is proposed to protect against destabilizing effects of pressure. The pressure and temperature of unfolding as well as associated enthalpy and volume changes have been determined using Fourier-transform infrared spectroscopy, covering a wide range of pressures and temperatures, ranging from 1 bar to 11 kbar and from 20 to 90 °C, respectively. Complementary thermodynamic measurements have been carried out using differential scanning and pressure perturbation calorimetry. The results obtained helped us explore the effect of the cellular milieu on the limitations of the pressure stability of cytoskeletal assemblies. Conversely to urea, the pressure stability of both polymers increases dramatically in the presence of TMAO, counteracting detrimental effects of both, urea and pressure.
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- 2018
14. The effects of glycine, TMAO and osmolyte mixtures on the pressure dependent enzymatic activity of α-chymotrypsin
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Michel W. Jaworek, Roland Winter, and Vitor Schuabb
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Kinetics ,Glycine ,General Physics and Astronomy ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Catalysis ,Enzyme catalysis ,Substrate Specificity ,Hydrolysis ,Methylamines ,Pressure ,Chymotrypsin ,Physical and Theoretical Chemistry ,chemistry.chemical_classification ,biology ,Chemistry ,Osmolar Concentration ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Enzyme ,Biochemistry ,Osmolyte ,biology.protein ,Thermodynamics ,0210 nano-technology - Abstract
High pressure is an important feature of certain natural environments, such as the deep sea where pressures up to about 1000 bar are encountered. Further, pressure effects on biosystems are of increasing interest for biotechnological applications, such as baroenzymology. We studied the effect of two different natural osmolyte mixtures, with major components being glycine and trimethylamine-N-oxide (TMAO), on the activity of α-chymotrypsin, using high-pressure stopped-flow methodology in combination with fast UV/Vis detection. We show that pressure is not only able to drastically enhance the catalytic activity and efficiency of the enzyme, but also that glycine has a significant and diverse effect on the enzymatic activity and volumetric properties of the reaction compared to TMAO. The results might not only help to understand the modulation of enzymatic reactions by natural osmolytes, but also elucidate ways to optimize enzymatic processes in biotechnological applications.
- Published
- 2017
15. Cosolvent and pressure effects on enzyme-catalysed hydrolysis reactions
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Roland Winter, Michel W. Jaworek, Christoph Held, Michael Knierbein, Gabriele Sadowski, Trung Quan Luong, and Tanja Stolzke
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030303 biophysics ,Kinetics ,Biophysics ,Molecular Dynamics Simulation ,Biochemistry ,Michaelis–Menten kinetics ,Enzyme catalysis ,Catalysis ,03 medical and health sciences ,chemistry.chemical_compound ,Hydrolysis ,Computational chemistry ,Pressure ,030304 developmental biology ,0303 health sciences ,Chemistry ,Dimethyl sulfoxide ,Organic Chemistry ,Enzymes ,Amine oxide ,Biocatalysis ,Solvents ,Thermodynamics ,Ambient pressure - Abstract
Thermodynamics and kinetics of biochemical reactions depend not only on temperature, but also on pressure and on the presence of cosolvents in the reaction medium. Understanding their effects on biochemical processes is a crucial step towards the design and optimization of industrially relevant enzymatic reactions. Such reactions typically do not take place in pure water. Cosolvents might be present as they are either required as stabilizer, as solubilizer, or in their function to overcome thermodynamic or kinetic limitations. Further, a vast number of enzymes has been found to be piezophilic or at least pressure-tolerant, meaning that nature has adapted them to high-pressure conditions. In this manuscript, we review existing data and we additionally present some new data on the combined cosolvent and pressure influence on the kinetics of biochemical reactions. In particular, we focus on cosolvent and pressure effects on Michaelis constants and catalytic constants of α-CT-catalysed peptide hydrolysis reactions. Two different substrates were considered in this work, N -succinyl-L-phenylalanine- p -nitroanilide and H -phenylalanine- p -nitroanilide. Urea, trimethyl- N -amine oxide, and dimethyl sulfoxide have been under investigation as these cosolvents are often applied in technical as well as in demonstrator systems. Pressure effects have been studied from ambient pressure up to 2 kbar. The existing literature data and the new data show that pressure and cosolvents must not be treated as independent effects. Non-additive interactions on a molecular level lead to a partially compensatory effect of cosolvents and pressure on the kinetic parameters of the hydrolysis reactions considered.
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- 2019
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16. Front Cover: Cosolvent and Crowding Effects on the Temperature‐ and Pressure‐Dependent Dissociation Process of the α/β‐Tubulin Heterodimer (ChemPhysChem 9/2019)
- Author
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Paul Hendrik Schummel, Roland Winter, Michel W. Jaworek, and Christian Anders
- Subjects
Temperature and pressure ,Tubulin ,Front cover ,Protein stability ,biology ,Chemistry ,biology.protein ,Physical and Theoretical Chemistry ,Photochemistry ,Atomic and Molecular Physics, and Optics ,Dissociation (chemistry) ,Co solvent - Published
- 2019
- Full Text
- View/download PDF
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