477 results on '"Mario C. Deng"'
Search Results
2. Many heart transplant biopsies currently diagnosed as no rejection have mild molecular antibody-mediated rejection-related changes
- Author
-
Daniel Kim, Katelynn S. Madill-Thomsen, Martin Cadeiras, Andreas Zuckermann, Jon A. Kobashigawa, Peter S. Macdonald, Luciano Potena, Philip F. Halloran, Eugene C. DePasquale, Johannes Gökler, Josef Stehlik, Marisa G. Crespo-Leiro, Mario C. Deng, A. Aliabadi-Zuckermann, and Keyur B. Shah
- Subjects
Graft Rejection ,Pulmonary and Respiratory Medicine ,Pathology ,medicine.medical_specialty ,Microarray ,Biopsy ,Inflammation ,Rejection ,Antibodies ,Archetypal analysis ,medicine ,Humans ,Prospective Studies ,1102 Cardiorespiratory Medicine and Haematology ,Microscopy ,Transplantation ,Ejection fraction ,biology ,medicine.diagnostic_test ,business.industry ,Myocardium ,Heart ,Cross-Sectional Studies ,Molecular Diagnostic Techniques ,Antibody mediated rejection ,biology.protein ,Heart Transplantation ,Surgery ,Gene expression ,medicine.symptom ,Antibody ,Cardiology and Cardiovascular Medicine ,business - Abstract
BackgroundThe Molecular Microscope (MMDx) system classifies heart transplant endomyocardial biopsies as No-rejection (NR), Early-injury, T cell-mediated (TCMR), antibody-mediated (ABMR), mixed, and possible rejection (possible TCMR, possible ABMR). Rejection-like gene expression patterns in NR biopsies have not been described. We extended the MMDx methodology, using a larger data set, to define a new "Minor" category characterized by low-level inflammation in non-rejecting biopsies.MethodsUsing MMDx criteria from a previous study, molecular rejection was assessed in 1,320 biopsies (645 patients) using microarray expression of rejection-associated transcripts (RATs). Of these biopsies, 819 were NR. A new archetypal analysis model in the 1,320 data set split the NRs into NR-Normal (N = 462) and NR-Minor (N = 359).ResultsCompared to NR-Normal, NR-Minor were more often histologic TCMR1R, with a higher prevalence of donor-specific antibody (DSA). DSA positivity increased in a gradient: NR-Normal 24%; NR-Minor 34%; possible ABMR 42%; ABMR 66%. The top 20 transcripts distinguishing NR-Minor from NR-Normal were all ABMR-related and/or IFNG-inducible, and also exhibited a gradient of increasing expression from NR-Normal through ABMR. In random forest analysis, TCMR and Early-injury were associated with reduced LVEF and increased graft loss, but NR-Minor and ABMR scores were not. Surprisingly, hearts with MMDx ABMR showed comparatively little graft loss.ConclusionsMany heart transplants currently diagnosed as NR by histologic or molecular assessment have minor increases in ABMR-related and IFNG-inducible transcripts, associated with DSA positivity and mild histologic inflammation. These results suggest that low-level ABMR-related molecular stress may be operating in many more hearts than previously estimated. (ClinicalTrials.gov #NCT02670408).
- Published
- 2022
- Full Text
- View/download PDF
3. What is that’s going on here? A multidimensional time concept is foundational to framing for decision making in situations of uncertainty
- Author
-
Mario C. Deng, Lezel Legados, I. Silacheva, Jennifer B. Plotkin, Federica Raia, and Srikanth Krishnan
- Subjects
Cultural Studies ,Dominant culture ,05 social sciences ,Subject (philosophy) ,050301 education ,Science education ,Object (philosophy) ,Family life ,Existentialism ,Epistemology ,03 medical and health sciences ,0302 clinical medicine ,Framing (social sciences) ,030212 general & internal medicine ,Sociology of Education ,Psychology ,0503 education - Abstract
STEM disciplines are the dominant culture in K-12 education. With its study of organs and diseases that afflict patients’ bodies, Western evidence-based medicine is seen and understood in the modern cultural paradigm as a science and as the practice in which a subject, the doctor, acts on an object; the patient’s body—a dominant culture in the patient’s journey. However, with the continually evolving high-technological and medical knowledge, life-saving therapeutic options are life-changing. They can range from changes in the diet, requiring structural and cultural changes in family life, to changes related to the experiences of learning to live tethered to a machine that is partly inside and partly outside one’s body or with somebody else’s heart. In this article, we show how competing needs to personalize care for the patient as a person forcefully emerge in response to evidence-based medicine’s global cultural dominance. We highlight two fundamental issues emerging in decision-making processes: (1) Framing evidence-based knowledge, uncertainties of the course of the disease and options, and (2) working with different, equally important, and often at odds conceptions of time in the care for the Other. Through the longitudinal analysis of moment-to-moment interactions in high-tech medicine encounters of a patient, his family, and the team caring for them, we show how framing and different conceptions of time emerge as issues, are profoundly interconnected, and are addressed by participants to care for a patient confronting existential decisions.
- Published
- 2021
- Full Text
- View/download PDF
4. Initial independent validation of a genomic heart failure survival prediction algorithm
- Author
-
Tristan Grogan, T. Bao, David Elashoff, I. Silacheva, Galyna Bondar, Mario C. Deng, Neha S. Kulkarni, Taisuke Nakade, and Sumeet Deshmukh
- Subjects
Pharmacology ,medicine.medical_specialty ,business.industry ,macromolecular substances ,medicine.disease ,Disease severity ,Biological property ,Heart failure ,Internal medicine ,Drug Discovery ,Genetics ,medicine ,Cardiology ,Molecular Medicine ,business - Abstract
Biological determinants of survival in advanced heart failure (AdHF) are linked to systems biological properties of disease severity including age, comorbidities, and frailty. We hypothesize that a...
- Published
- 2021
- Full Text
- View/download PDF
5. The evolution of patient-specific precision biomarkers to guide personalized heart-transplant care
- Author
-
Mario C. Deng
- Subjects
Pharmacology ,Heart transplantation ,medicine.medical_specialty ,business.industry ,Systems biology ,medicine.medical_treatment ,Patient specific ,Precision medicine ,Article ,Endomyocardial biopsy ,Allograft rejection ,Drug Discovery ,Genetics ,medicine ,Molecular Medicine ,Biomarker (medicine) ,Personalized medicine ,business ,Intensive care medicine - Abstract
INTRODUCTION: In parallel to the clinical maturation of heart transplantation over the last 50 years, rejection testing has been revolutionized within the systems biology paradigm triggered by the Human Genome Project. AREAS COVERED: We have co-developed the first FDA-cleared diagnostic and prognostic leukocyte gene expression profiling biomarker test in transplantation medicine that gained international evidence-based medicine guideline acceptance to rule out moderate/severe acute cellular cardiac allograft rejection without invasive endomyocardial biopsies. This work prompted molecular re-classification of intragraft biology, culminating in the identification of a pattern of intragraft myocyte injury, in addition to acute cellular rejection and antibody-mediated rejection. This insight stimulated research into non-invasive detection of myocardial allograft injury. The addition of a donor-organ specific myocardial injury marker based on donor-derived cell-free DNA further strengthens the non-invasive monitoring concept, combining the clinical use of two complementary non-invasive blood-based measures, host immune activity-related risk of acute rejection as well as cardiac allograft injury. EXPERT OPINION: This novel complementary non-invasive heart transplant monitoring strategy based on leukocyte gene expression profiling and donor-derived cell-free DNA that incorporates longitudinal variability measures provides an exciting novel algorithm of heart transplant allograft monitoring. This algorithm’s clinical utility will need to be tested in an appropriately designed randomized clinical trial which is in preparation.
- Published
- 2020
- Full Text
- View/download PDF
6. NK and CD8+ T cell phenotypes predict onset and control of CMV viremia after kidney transplant
- Author
-
Subha Sen, Lewis L. Lanier, Harry Pickering, Elaine F. Reed, Alexander Hoffmann, Janice Arakawa-Hoyt, Gemalene Sunga, Richard Ahn, Kenichi Ishiyama, Suphamai Bunnapradist, David W. Gjertson, Yumeng Sun, Joanna Schaenman, Mario C. Deng, Rajesh Parmar, Maura Rossetti, and Megan Llamas
- Subjects
Adult ,Male ,T cell ,Immunology ,T cells ,Viremia ,NK cells ,CD8-Positive T-Lymphocytes ,Peripheral blood mononuclear cell ,Young Adult ,Immune system ,Immunity ,medicine ,Humans ,Cytotoxic T cell ,Aged ,Transplantation ,Organ transplantation ,business.industry ,virus diseases ,CD28 ,General Medicine ,Middle Aged ,medicine.disease ,Kidney Transplantation ,Killer Cells, Natural ,Phenotype ,medicine.anatomical_structure ,Cytomegalovirus Infections ,Female ,business ,Research Article - Abstract
Cytomegalovirus (CMV) causes mostly asymptomatic but lifelong infection. Primary infection or reactivation in immunocompromised individuals can be life-threatening. CMV viremia often occurs in solid organ transplant (SOT) recipients and associates with decreased graft survival and higher mortality. Furthering understanding of impaired immunity allowing CMV reactivation is critical to guiding anti-viral therapy and examining CMV's impact on outcomes of SOT. This study characterized longitudinal immune responses to CMV in 31 kidney transplant recipients with CMV viremia and matched, non-viremic recipients. Subjects were sampled three- and twelve-months post-transplant, with additional samples one-week and one-month post-viremia. Peripheral blood mononuclear cells (PBMC) were stained for NK and T cell markers. PBMC transcriptomes were characterized by RNA-Seq. Plasma proteins were quantified by Luminex. CD8 T cell transcriptomes were characterized by single-cell RNA-Seq. Pre-viremia, patients had high levels of IL-15 with concurrent expansion of immature CD56bright NK cells. Post-viremia, mature CD56dim NK cells and CD28- CD8 T cells upregulating inhibitory and NK-associated receptors were expanded. Phenotype of NK cells and CD28- CD8 T cells were associated with control of viremia. These findings suggest signatures of innate activation may be prognostic for CMV reactivation post-transplant, while CD8 T cell functionality is critical for effective control of CMV.
- Published
- 2021
- Full Text
- View/download PDF
7. Association of pro-inflammatory cytokines and monocyte subtypes in older and younger patients on clinical outcomes after mechanical circulatory support device implantation
- Author
-
V. Groysberg, Galyna Bondar, Mario C. Deng, Tiffany Sidwell, Sitaram Vangala, E. Chang, Maura Rossetti, Murray Kwon, Gemalene Sunga, Elaine F. Reed, Emily Liang, Martin Cadeiras, Joanna Schaenman, and M. Bakir
- Subjects
Male ,0301 basic medicine ,Oncology ,Aging ,medicine.medical_treatment ,Lipopolysaccharide Receptors ,Monocytes ,0302 clinical medicine ,80 and over ,Innate ,2.1 Biological and endogenous factors ,Immunology and Allergy ,Aetiology ,Aged, 80 and over ,screening and diagnosis ,Age Factors ,General Medicine ,Immunosenescence ,Middle Aged ,Detection ,Treatment Outcome ,Cytokine ,medicine.anatomical_structure ,Ventricular assist device ,Cytokines ,Biomarker (medicine) ,Female ,Inflammation Mediators ,medicine.symptom ,Adult ,medicine.medical_specialty ,Immunology ,Heart failure ,Bioengineering ,Inflammation ,Peripheral blood mononuclear cell ,Article ,Proinflammatory cytokine ,03 medical and health sciences ,Clinical Research ,Internal medicine ,medicine ,Humans ,Cardiac Surgical Procedures ,Aged ,Heart Failure ,business.industry ,Inflammatory and immune system ,Monocyte ,Immunity ,medicine.disease ,Survival Analysis ,Immunity, Innate ,4.1 Discovery and preclinical testing of markers and technologies ,030104 developmental biology ,Heart-Assist Devices ,business ,030215 immunology - Abstract
Noninvasive immunologic analysis of peripheral blood holds promise for explaining the mechanism of development of adverse clinical outcomes, and may also become a method for patient risk stratification before or after mechanical circulatory support device (MCSD) implantation. Dysregulation of the innate immune system is associated with increased patient age but has yet to be evaluated in the older patient with advanced heart failure undergoing MCSD surgery. Patients pre- and post-MCSD implantation had peripheral blood mononuclear cells (PBMC) and serum isolated. Multiparameter flow cytometry was used to analyze markers of innate cell function, including monocyte subtypes. Multiplex cytokine analysis was performed. MELD-XI and SOFA scores were utilized as surrogate markers of outcomes. Increased levels of pro-inflammatory cytokines including IL-15, TNF-α, and IL-10 were associated with increased MELD-XI and SOFA scores. IL-8, TNF- α, and IL-10 were associated with risk of death after MCSD implantation, even with correction for patient age. Increased frequency of ‘classical’ monocytes (CD14 + CD16−) were associated with increased MELD-XI and SOFA scores. This suggests that inflammation and innate immune system activation contribute to progression to multiorgan system failure and death after MCSD surgery. Development of noninvasive monitoring of peripheral blood holds promise for biomarker development for candidate selection and patient risk stratification.
- Published
- 2019
- Full Text
- View/download PDF
8. Orthotopic Heart and Combined Heart Liver Transplantation: the Ultimate Treatment Option for Failing Fontan Physiology
- Author
-
Ali Nsair, Joseph S. Meltzer, Jamil Aboulhosn, Reshma Biniwale, Hillel Laks, Fady M. Kaldas, Tiffany M. Williams, Mario C. Deng, Jacques Neelankavil, Sammy Saab, Andrew J. Baird, Jure Marijic, Robert S. Venick, Wolf B. Kratzert, Katrina M Whalen, Glen S VanArsdell, Daniel Cruz, Leigh C. Reardon, Lorraine N Lubin, Christopher Wray, James M. Wilson, Weiyi Tan, Gentian Lluri, Vadim Gudzenko, Melissa A. Moore, and Jeannette Lin
- Subjects
medicine.medical_specialty ,medicine.medical_treatment ,Immunology ,030204 cardiovascular system & hematology ,Liver transplantation ,Cardiovascular ,03 medical and health sciences ,Embolization ,0302 clinical medicine ,Internal medicine ,medicine ,030212 general & internal medicine ,Liver transplant ,Pediatric ,Transplantation ,Hepatology ,business.industry ,Liver Disease ,Evaluation of treatments and therapeutic interventions ,Treatment options ,Organ Transplantation ,Perinatal Period - Conditions Originating in Perinatal Period ,Fontan physiology ,medicine.disease ,Hypoplasia ,Thoracic Transplantation (J Patel and AM Holm, Section Editors) ,Heart Disease ,medicine.anatomical_structure ,Nephrology ,Single ventricle physiology ,Ventricle ,Single ventricle ,Cardiology ,cardiovascular system ,Biomedical Imaging ,Congenital Structural Anomalies ,Surgery ,Heart transplant ,Digestive Diseases ,business ,6.4 Surgery ,Enteropathy ,Fontan - Abstract
Purpose of the Review This is a comprehensive update on failing Fontan physiology and the role of heart and combined heart and liver transplantation in the current era. Recent Findings Single ventricle physiology encompasses a series of rare congenital cardiac abnormalities that are characterized by absence of or hypoplasia of one ventricle. This effectively results in a single ventricular pumping chamber. These abnormalities are rarely compatible with long-term survival if left without surgical palliation in the first few years of life. Surgical treatment of single ventricle physiology has evolved over the past 60 years and is characterized by numerous creative innovations. These include the development of arteriopulmonary shunts, the evolution of partial cavopulmonary connections, and the eventual development of the “Fontan” operation. Regardless of the type of Fontan modification, the long-term consequences of the Fontan operation are predominantly related to chronic central venous hypertension and the multi-organ consequences thereof. Atrial arrhythmias can further compromise this circulation.Patients with single ventricle physiology represent a special sub-segment of congenital cardiac transplants and are arguably the most challenging patients considered for transplantation. Summary This review describes in detail the challenges and opportunities of heart and liver transplantation in Fontan patients, as viewed and managed by the experienced team at the Ahmanson/UCLA Adult Congenital Heart Center.
- Published
- 2021
9. Multi-dimensional COVID-19 short- and long-term outcome prediction algorithm
- Author
-
Mario C. Deng
- Subjects
Pharmacology ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Computer science ,animal diseases ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Article ,Term (time) ,Drug Discovery ,Genetics ,Multi dimensional ,Molecular Medicine ,Outcome prediction ,Algorithm - Abstract
COVID-19 is an evolutionarily unprecedented natural experiment testing human immunological fitness and the potential to recover from a virus-activated ‘cytokine storm syndrome’ [1], a manifestation...
- Published
- 2020
10. Heart transplantation in the early phase of the COVID‐19 pandemic: A single‐center case series
- Author
-
Abbas Ardehali, Daniel Cruz, S. Fraschilla, Jeffrey J. Hsu, Bernard M. Kubak, M. Kamath, Joanna Schaenman, Margrit Carlson, D. Vucicevic, Pryce Gaynor, Ashley Fan, Reza Ardehali, Mario C. Deng, Emily Stimpson, Farah Al-Saffar, A. Baas, and Ali Nsair
- Subjects
Male ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,medicine.medical_treatment ,Population ,coronavirus ,030230 surgery ,Brief Communication ,heart transplantation ,Single Center ,Perioperative Care ,SARS‐CoV‐2 ,03 medical and health sciences ,COVID-19 Testing ,Postoperative Complications ,0302 clinical medicine ,COVID‐19 ,Pandemic ,medicine ,Humans ,Intensive care medicine ,education ,Pandemics ,Aged ,Heart Failure ,Heart transplantation ,Infection Control ,Transplantation ,education.field_of_study ,Surge Capacity ,business.industry ,pandemic ,COVID-19 ,Middle Aged ,Los Angeles ,Treatment Outcome ,Infectious disease (medical specialty) ,Female ,030211 gastroenterology & hepatology ,business - Abstract
The infectious disease Coronavirus Disease 2019 (COVID‐19) was declared a pandemic by the World Health Organization in March 2020. The impact of COVID‐19 on solid organ transplantations, including heart transplantation, is currently unclear. Many transplant programs have been forced to swiftly re‐evaluate and adapt their practices, leading to a marked decrease in transplants performed. This trend has been due to various factors, including increased donor COVID‐19 screening scrutiny and recipient waiting list management in anticipation of COVID‐19 critical care surge capacity planning. In the face of these unknown variables, determining when and how to proceed with transplantation in our population of patients with end‐stage cardiomyopathies is challenging. Here, we describe our center’s experience with orthotopic heart transplantation (OHT) in one of the country’s pandemic epicenters, where we performed eight OHTs in the first two months after community spread began in late February 2020.
- Published
- 2020
- Full Text
- View/download PDF
11. Noninvasive biomarkers for prediction and diagnosis of heart transplantation rejection
- Author
-
Yeraz Khachatoorian, Martin Cadeiras, Elaine F. Reed, Erick R. Sernas, Brendan J. Keating, Alexandre C. Pereira, Brian D. Piening, Vahe Khachadourian, Mario C. Deng, and E. Chang
- Subjects
Heart transplantation ,Graft Rejection ,Transplantation ,business.industry ,medicine.medical_treatment ,030230 surgery ,medicine.disease ,Proteomics ,Bioinformatics ,Omics ,Peripheral blood mononuclear cell ,Tissue Donors ,Gene expression profiling ,Transcriptome ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Heart failure ,medicine ,Leukocytes, Mononuclear ,Heart Transplantation ,Humans ,030211 gastroenterology & hepatology ,business ,Biomarkers - Abstract
For most patients with end-stage heart failure, heart transplantation is the treatment of choice. Allograft rejection is one of the major post-transplantation complications affecting graft outcome and survival. Recent advancements in science and technology offer an opportunity to integrate genomic and other omics-based biomarkers into clinical practice, facilitating noninvasive evaluation of allograft for diagnostic and prognostic purposes. Omics, including gene expression profiling (GEP) of blood immune cell components and donor-derived cell-free DNA (dd-cfDNA) are of special interest to researchers. Several studies have investigated levels of dd-cfDNA and miroRNAs in blood as potential markers for early detection of allograft rejection. One of the achievements in the field of transcriptomics is AlloMap, GEP of peripheral blood mononuclear cells (PBMC), which can identify 11 differentially expressed genes and help with detection of moderate and severe acute cellular rejection in stable heart transplant recipients. In recent years, the utilization of GEP of PBMC for identifying differentially expressed genes to diagnose acute antibody-mediated rejection and cardiac allograft vasculopathy has yielded promising results. Advancements in the field of metabolomics and proteomics as well as their potential implications have been further discussed in this paper.
- Published
- 2020
12. Rejection-associated Mitochondrial Impairment After Heart Transplantation
- Author
-
Erick Romero, Martin Cadeiras, Jose A. Tallaj, Diego Pinheiro, Brendan J. Keating, Silvio H. Litovsky, Esteban G. Tabak, Mario C. Deng, and E. Chang
- Subjects
Heart transplantation ,Transplantation ,business.industry ,medicine.medical_treatment ,Histology ,Brain natriuretic peptide ,Bioinformatics ,medicine.disease_cause ,MRNA Sequencing ,Gene expression ,medicine ,Lung transplantation ,Heart Transplantation ,business ,Gene ,Oxidative stress - Abstract
Background Mitochondrial dysfunction is associated with poor allograft prognosis. Mitochondrial-related gene expression (GE) in endomyocardial biopsies (EMBs) could be useful as a nonimmune functional marker of rejection. We hypothesize that acute cardiac allograft rejection is associated with decreased mitochondrial-related GE in EMBs. Methods We collected 64 routines or clinically indicated EMB from 47 patients after heart transplant. The EMBs were subjected to mRNA sequencing. We conducted weighted gene coexpression network analysis to construct module-derived eigengenes. The modules were assessed by gene ontology enrichment and hub gene analysis. Modules were correlated with the EMBs following the International Society of Heart and Lung Transplantation histology-based criteria and a classification based on GE alone; we also correlated with clinical parameters. Results The modules enriched with mitochondria-related and immune-response genes showed the strongest correlation to the clinical traits. Compared with the no-rejection samples, rejection samples had a decreased activity of mitochondrial-related genes and an increased activity of immune-response genes. Biologic processes and hub genes in the mitochondria-related modules were primarily involved with energy generation, substrate metabolism, and regulation of oxidative stress. Compared with International Society of Heart and Lung Transplantation criteria, GE-based classification had stronger correlation to the weighted gene coexpression network analysis-derived functional modules. The brain natriuretic peptide level, ImmuKnow, and Allomap scores had negative relationships with the expression of mitochondria-related modules and positive relationships with immune-response modules. Conclusions During acute cardiac allograft rejection, there was a decreased activity of mitochondrial-related genes, related to an increased activity of immune-response genes, and depressed allograft function manifested by brain natriuretic peptide elevation. This suggests a rejection-associated mitochondrial impairment.
- Published
- 2020
13. Forms of Touch during Medical Encounters with an Advanced Heart Failure (AdHF) Doctor who Practices Relational Medicine
- Author
-
Mario C. Deng, Marjorie H. Goodwin, and Federica Raia
- Subjects
Nursing ,Participatory action research ,Psychology ,Existentialism ,Case analysis ,Multimodality - Abstract
Within a participatory research project, we investigate how forms of touch we call caring touch are enacted in AdHF medical encounters. Through the theoretical lens of Relational Ontology (Raia, 2018), grounding multimodality in phenomenology, we identify various forms of caring touch. When occurring in conjunction with medical/diagnostic touch, especially in situations of a perceived patient’s vulnerability, caring touch facilitates passages from the person level to the organ, tissue, and gene levels and then back to the whole-person level in an uninterrupted movement, maintaining the person-person relation between doctor and patient. Gentle shepherding (Cekaite, 2010) is used to guide the patient body, and comforting touch (Goodwin & Cekaite, 2018) accompanies invitations to enter a space where death is part of living. We show the existential grounding power of caring touch, which constitutes forms of reciprocal sharing of existential experiences in caring-for-the-Other. All these forms of caring touch are employed by an AdHF doctor whose work centers on the practice of Relational Medicine (Raia and Deng, 2015b), in which the starting and returning point is the patient in his/her life. While providing a single case analysis, the research builds from a corpus of 500 hours of recorded medical encounters with 125 patients in high-tech medicine.
- Published
- 2020
- Full Text
- View/download PDF
14. Clinical phenomapping and outcomes after heart transplantation
- Author
-
Daniel Cruz, Jennifer Phung, David A. Liem, Simon X. Han, A. Baas, Ali Nsair, Murray Kwon, Bernard M. Kubak, Mario C. Deng, Elaine F. Reed, Alex A. T. Bui, T. Khuu, Gregg C. Fonarow, Martin Cadeiras, Richard J. Shemin, Chi-Hong Tseng, E. Chang, Abbas Ardehali, Joanna Schaenman, Qiuheng J. Zhang, Marcella Calfon Press, M. Bakir, Reza Ardehali, Eugene C. DePasquale, and Nicholas Jackson
- Subjects
Adult ,Genetic Markers ,Graft Rejection ,Male ,Pulmonary and Respiratory Medicine ,Oncology ,medicine.medical_specialty ,Multivariate analysis ,T-Lymphocytes ,Ubiquitin-Protein Ligases ,medicine.medical_treatment ,030204 cardiovascular system & hematology ,030230 surgery ,Peripheral blood mononuclear cell ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Risk Factors ,Internal medicine ,medicine ,Humans ,Precision Medicine ,Adverse effect ,Aged ,Heart transplantation ,Transplantation ,business.industry ,Antibody titer ,Immunosuppression ,Middle Aged ,Phenotype ,fms-Like Tyrosine Kinase 3 ,Heart Transplantation ,Biomarker (medicine) ,Female ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,Immunosuppressive Agents ,Follow-Up Studies - Abstract
Background Survival after heart transplantation (HTx) is limited by complications related to alloreactivity, immune suppression, and adverse effects of pharmacologic therapies. We hypothesize that time-dependent phenomapping of clinical and molecular data sets is a valuable approach to clinical assessments and guiding medical management to improve outcomes. Methods We analyzed clinical, therapeutic, biomarker, and outcome data from 94 adult HTx patients and 1,557 clinical encounters performed between January 2010 and April 2013. Multivariate analyses were used to evaluate the association between immunosuppression therapy, biomarkers, and the combined clinical end point of death, allograft loss, retransplantation, and rejection. Data were analyzed by K-means clustering (K = 2) to identify patterns of similar combined immunosuppression management, and percentile slopes were computed to examine the changes in dosages over time. Findings were correlated with clinical parameters, human leucocyte antigen antibody titers, and peripheral blood mononuclear cell gene expression of the AlloMap (CareDx, Inc., Brisbane, CA) test genes. An intragraft, heart tissue gene coexpression network analysis was performed. Results Unsupervised cluster analysis of immunosuppressive therapies identified 2 groups, 1 characterized by a steeper immunosuppression minimization, associated with a higher likelihood for the combined end point, and the other by a less pronounced change. A time-dependent phenomap suggested that patients in the group with higher event rates had increased human leukocyte antigen class I and II antibody titers, higher expression of the FLT3 AlloMap gene, and lower expression of the MARCH8 and WDR40A AlloMap genes. Intramyocardial biomarker-related coexpression network analysis of the FLT3 gene showed an immune system–related network underlying this biomarker. Conclusions Time-dependent precision phenotyping is a mechanistically insightful, data-driven approach to characterize patterns of clinical care and identify ways to improve clinical management and outcomes.
- Published
- 2018
- Full Text
- View/download PDF
15. T cell dysfunction and patient age are associated with poor outcomes after mechanical circulatory support device implantation
- Author
-
N. Wisniewski, Joanna Schaenman, Galyna Bondar, Yael Korin, Elaine F. Reed, M. Bakir, Murray Kwon, Maura Rossetti, Mario C. Deng, Tiffany Sidwell, Sitaram Vangala, E. Chang, V. Groysberg, Emily Liang, and Martin Cadeiras
- Subjects
Male ,0301 basic medicine ,Oncology ,Aging ,Heart disease ,T-Lymphocytes ,030204 cardiovascular system & hematology ,Lymphocyte Activation ,Severity of Illness Index ,Elderly ,Postoperative Complications ,0302 clinical medicine ,80 and over ,Killer Cells ,2.1 Biological and endogenous factors ,Immunology and Allergy ,Prospective Studies ,Aetiology ,Aged, 80 and over ,Age Factors ,General Medicine ,Middle Aged ,Flow Cytometry ,Natural killer T cell ,Killer Cells, Natural ,Treatment Outcome ,medicine.anatomical_structure ,Circulatory system ,Natural ,Female ,Adult ,Senescence ,medicine.medical_specialty ,Immune phenotype ,Multiple Organ Failure ,T cell ,Immunology ,Peripheral blood mononuclear cell ,Article ,T-cell dysfunction ,03 medical and health sciences ,Immune system ,Mechanical circulatory support ,Clinical Research ,Internal medicine ,medicine ,Humans ,Aged ,Heart Failure ,business.industry ,medicine.disease ,030104 developmental biology ,Heart-Assist Devices ,business ,Biomarkers - Abstract
Immunologic impairment may contribute to poor outcomes after implantation of mechanical circulatory support device (MCSD), with infection often as a terminal event. The study of immune dysfunction is of special relevance given the growing numbers of older patients with heart disease. The aim of the study was to define which immunologic characteristics are associated with development of adverse clinical outcomes after MCSD implantation. We isolated peripheral blood mononuclear cells (PBMC) from patients pre- and up to 20 days post-MCSD implantation and analyzed them by multiparameter flow cytometry for T cell dysfunction, including terminal differentiation, exhaustion, and senescence. We used MELD-XI and SOFA scores measured at each time point as surrogate markers of clinical outcome. Older patients demonstrated increased frequencies of terminally differentiated T cells as well as NKT cells. Increased frequency of terminally differentiated and immune senescent T cells were associated with worse clinical outcome as measured by MELD-XI and SOFA scores, and with progression to infection and death. In conclusion, our data suggest that T cell dysfunction, independently from age, is associated with poor outcomes after MCSD implantation, providing a potential immunologic mechanism behind patient vulnerability to multiorgan dysfunction and death. This noninvasive approach to PBMC evaluation holds promise for candidate evaluation and patient monitoring.
- Published
- 2018
- Full Text
- View/download PDF
16. Current indications for transplantation: stratification of severe heart failure and shared decision-making
- Author
-
Mario C. Deng, D. Vucicevic, Lily Honoris, and Federica Raia
- Subjects
0301 basic medicine ,Keynote Lecture Series ,stage D ,Comparative Effectiveness Research ,medicine.medical_specialty ,medicine.medical_treatment ,shared decision making ,Population ,Heart failure ,risk stratification ,030204 cardiovascular system & hematology ,heart transplantation ,palliation therapy ,Cardiovascular ,7.3 Management and decision making ,03 medical and health sciences ,0302 clinical medicine ,Clinical Research ,Behavioral and Social Science ,Patient experience ,Health care ,Materials Chemistry ,medicine ,Stage (cooking) ,Intensive care medicine ,education ,Heart transplantation ,mechanical circulatory support ,screening and diagnosis ,education.field_of_study ,business.industry ,medicine.disease ,4.1 Discovery and preclinical testing of markers and technologies ,Therapeutic relationship ,Transplantation ,Detection ,Heart Disease ,Good Health and Well Being ,030104 developmental biology ,Surgery ,Patient Safety ,Management of diseases and conditions ,Cardiology and Cardiovascular Medicine ,business - Abstract
Heart failure (HF) is a complex clinical syndrome that results from structural or functional cardiovascular disorders causing a mismatch between demand and supply of oxygenated blood and consecutive failure of the body’s organs. For those patients with stage D HF, advanced therapies, such as mechanical circulatory support (MCS) or heart transplantation (HTx), are potentially life-saving options. The role of risk stratification of patients with stage D HF in a value-based healthcare framework is to predict which subset might benefit from advanced HF (AdHF) therapies, to improve outcomes related to the individual patient including mortality, morbidity and patient experience as well as to optimize health care delivery system outcomes such as cost-effectiveness. Risk stratification and subsequent outcome prediction as well as therapeutic recommendation-making need to be based on the comparative survival benefit rationale. A robust model needs to (I) have the power to discriminate (i.e., to correctly risk stratify patients); (II) calibrate (i.e., to show agreement between the predicted and observed risk); (III) to be applicable to the general population; and (IV) provide good external validation. The Seattle Heart Failure Model (SHFM) and the Heart Failure Survival Score (HFSS) are two of the most widely utilized scores. However, outcomes for patients with HF are highly variable which make clinical predictions challenging. Despite our clinical expertise and current prediction tools, the best short- and long-term survival for the individual patient, particularly the sickest patient, is not easy to identify because among the most severely ill, elderly and frail patients, most preoperative prediction tools have the tendency to be imprecise in estimating risk. They should be used as a guide in a clinical encounter grounded in a culture of shared decision-making, with the expert healthcare professional team as consultants and the patient as an empowered decision-maker in a trustful safe therapeutic relationship.
- Published
- 2018
- Full Text
- View/download PDF
17. NGS and NanoString Platforms Play Complementary Role in Bedside Advanced Heart Failure Outcome Prediction Test Development
- Author
-
I. Silacheva, Xin-Min Li, Galyna Bondar, W. Xu, David Elashoff, T. Bao, Mario C. Deng, J. Moose, Tristan Grogan, and Emmanuelle Faure-Kumar
- Subjects
Pulmonary and Respiratory Medicine ,Transplantation ,Reproducibility ,business.industry ,Computational biology ,Gene signature ,DNA sequencing ,Pearson product-moment correlation coefficient ,Correlation ,Transcriptome ,symbols.namesake ,Gene expression ,symbols ,Medicine ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,Gene - Abstract
Purpose In order to create a clinical assay that preoperatively predicts 1-year survival status of AdHF patients following surgical/interventional therapies and to select the appropriate commercial platform, we compared the properties of Next Generation Sequencing (NGS) to NanoString (NS). Methods 8ml of blood was collected in CPT tubes from 25 AdHF patients (11 heart failure control, 4 mechanical circulatory support surgery, and 10 heart transplant surgery) at UCLA Medical Center 2015-2016. Purified RNA samples were aliquoted in two sets: one was processed using NGS transcriptome analysis (Illumina HiSeq 2500) and compared to 770 genes represented on NS pre-existing PanCancer IO 360 Gene Expression research panel. Prior to statistical analysis, expression values were log transformed. Pearson correlation coefficients were computed for each sample. Gene expression values were compared between NS and NGS across the set of matched genes and for each of the matched genes across the set of samples. Genes were grouped by average NGS expression, and the NS-NGS correlation for each group was computed. Results Out of 770 genes, 734 overlapped between both platforms and showed high intrasample correlation (R^2 = 0.82). Genes with higher expression demonstrated higher correlation across both platforms (Figure). NS demonstrated high robustness: Gene signature scores were similar across different RNA input concentrations, cartridges, and outcomes; sensitivity: Probe counts between 100 and 500 detected and quantified. The RNA input of 100 ng yielded the most precise result and were used for downstream analysis; and reproducibility: Technical replicates with equal concentration (100ng input) showed extremely high correlation (R^2 > 0.99), thus demonstrating high reproducibility. Conclusion Both platforms have meaningful, complementary roles, NGS for discovery and NanoString for commercialization and can be used for AdHF-biomarker test development.
- Published
- 2021
- Full Text
- View/download PDF
18. 1109. Valgancyclovir Dosing for Cytomegalovirus Prophylaxis in Heart Transplant Recipients
- Author
-
Omer E. Beaird, Ashrit Multani, Margrit Carlson, Pryce Gaynor, Matthew R Davis, Joanna Schaenman, Ali Nsair, Glen Huang, and Mario C. Deng
- Subjects
Heart transplantation ,biology ,business.industry ,medicine.medical_treatment ,Congenital cytomegalovirus infection ,virus diseases ,Valganciclovir ,Viremia ,medicine.disease ,Immunoglobulin G ,Transplantation ,AcademicSubjects/MED00290 ,Infectious Diseases ,Oncology ,Viral Load result ,Poster Abstracts ,Immunology ,biology.protein ,medicine ,Dosing ,business ,medicine.drug - Abstract
Background Cytomegalovirus (CMV) is one of the most common infections after transplantation and continues to cause significant morbidity and mortality. Current guidelines recommend 3-6 months of post-transplant prophylaxis with 900mg daily of valganciclovir in heart transplant recipients. At our institution, however, the protocol is to use 450mg daily of valganciclovir for 6-12 months for intermediate risk (R+) patients and 900 mg daily for high risk (D+/R-) patients. In this study we aimed to identify underlying patient characteristics associated with detectable viral load above the quantifiable threshold. Table 1. Comparison of patients with a CMV viral above and below 137. Methods We retrospectively reviewed medical records of adult (≥ 18 years) heart transplant recipients with detectable CMV viremia from 2016-2018 resulted during routine clinical screening. Results Ninety-seven heart transplant recipients with a detectable CMV viral load were identified. Of those, 38 (37.2%) had a quantifiable viral load above the 137 IU/mL threshold. When compared to the individuals with a detectable viral load below the threshold (< 137 IU/mL), they had similar age at time of transplant, increased likelihood of donor/recipient CMV IgG mismatch, and were more frequently on 900mg daily of prophylaxis at time of viremia. Of the individuals with CMV DNAemia above the threshold, the median time to viremia was 271.4 days and the median peak viral load was 701 IU/mL. When limiting analysis to only recipients who were CMV IgG positive, patients with viremia had similar age and more likely to be on 900mg daily of valganciclovir as prophylaxis when compared to individuals with CMV viremia < 137 IU/mL. When comparing CMV D+/R- patients, age and rates of 900mg valganciclovir as prophylaxis were similar (Table 1). Conclusion We found that despite receipt of CMV prophylaxis, an appreciable number of both R+ and D-/R+ heart transplant recipients developed breakthrough DNAemia despite being on prophylaxis of valganciclovir as recommended by guidelines. Despite receipt of the higher 900 mg daily dose, high risk patients had higher rates of breakthrough DNAemia at our institution compared with R+ intermediate risk patients. More research is needed to evaluate the optimal dose and duration for prophylaxis in heart transplant patients against CMV. Disclosures All Authors: No reported disclosures
- Published
- 2020
- Full Text
- View/download PDF
19. Combined AlloSure and AlloMap Testing in Multi-Organ Heart Transplantation Rejection Surveillance
- Author
-
James E. Smith, Mario C. Deng, Murray Kwon, S. Fraschilla, Jeffrey J. Hsu, J. Fuentes, Daniel Cruz, Farah Al-Saffar, M. Moore, Ashley Fan, Abbas Ardehali, Ali Nsair, and E. Stimpson
- Subjects
Pulmonary and Respiratory Medicine ,Heart transplantation ,Transplantation ,medicine.medical_specialty ,Graft dysfunction ,medicine.diagnostic_test ,business.industry ,medicine.medical_treatment ,Liver transplantation ,Multi organ ,Internal medicine ,Cohort ,medicine ,Blood test ,Surgery ,Cardiology and Cardiovascular Medicine ,Solid organ transplantation ,business ,Survival rate - Abstract
Purpose AlloSure test is a non-invasive blood test designed to detect the presence of donor cell-free DNA in the recipients blood as a measure of the probability of rejection in heart transplant recipients. The result is displayed as a percent of donor-derived cell-free DNA (dd-cfDNA) in the totalcell-free DNA (cfDNA). Recommended threshold of 0.2% dd-cfDNA has been predictive of low likelihood of rejection. There is no data looking at its value and validation in multi-organ transplant. We aimed to study this area by reviewing our transplant database. Methods All patients who received more than one solid organ transplant at our center and had AlloSure testing were included. Study outcomes included one year survival, rejection grade 2R or more, and hemodynamically significant graft dysfunction. Results There were (7) patients included in the study, average AlloSure score was 0.93% ±0.61% with an average AlloMap score of 33.8±2.14. Four patients (57.1%) had heart and kidney transplant, 3 patients (42.9%) had heart and liver transplantation. Average AlloSure score for heart/kidney transplant recipients was 0.52±0.17% with an average AlloMap score of 33.6±2.28. The while average AlloSure score for heart/liver transplant recipients was 1.21±0.55% mean AlloMap score of 33.93±2.32. None of our patients had graft dysfunction or biopsy-proven rejection >=2R. Survival rate was 100% for the first year in our patients Conclusion AlloSure levels were higher in heart-liver vs. heart-kidney recipients, and in both cohorts higher than the 0.2% threshold recommended for heart transplant prediction of rejection, however did not predict rejection. In our cohort, while AlloMap scores were consistent in both groups, (33.93±2.32 vs. 33.6±2.28 respectively). Elevated AlloSure was not predictive of rejection in multiorgan heart transplant recipients.
- Published
- 2020
- Full Text
- View/download PDF
20. Discovery of non-HLA antibodies associated with cardiac allograft rejection and development and validation of a non-HLA antigen multiplex panel: From bench to bedside
- Author
-
Adrian B. Van Bakel, Jon A. Kobashigawa, Ying Zheng, Michelle J. Hickey, Bryan Ray, David W. Gjertson, Gregory A. Fishbein, Reshma Biniwale, Hector L. Banchs, Howard J. Eisen, G. Torre, Randall C. Starling, Murray Kwon, A. Baas, Carrie Butler, Daniel Cruz, Ivan Balazs, Ali Nsair, Mario C. Deng, Ning Jiang, Ping Rao, Martin Cadeiras, Abbas Ardehali, Reza Ardehali, David DeNofrio, Qiuheng Zhang, Elaine F. Reed, Gregory A. Ewald, and Abdallah G. Kfoury
- Subjects
Graft Rejection ,translational research/science ,Immunogenetics ,030230 surgery ,Cardiovascular ,heart transplantation ,Medical and Health Sciences ,0302 clinical medicine ,HLA Antigens ,Immunology and Allergy ,Medicine ,Pharmacology (medical) ,Multiplex ,histocompatibility ,organ transplantation in general ,heart transplantation/cardiology ,protein array ,science ,biology ,Allografts ,autoantigen ,practice ,Heart Disease ,cardiology ,microarray/protein array ,Antibody ,rejection ,microarray ,Biotechnology ,Human leukocyte antigen ,clinical research/practice ,Antibodies ,03 medical and health sciences ,Immune system ,Clinical Research ,Transplantation ,business.industry ,Prevention ,Inflammatory and immune system ,Autoantibody ,Organ Transplantation ,Histocompatibility ,immunogenetics ,translational research ,Immunology ,biology.protein ,Heart Transplantation ,Surgery ,business ,autoantibody - Abstract
We analyzed humoral immune responses to nonhuman leukocyte antigen (HLA) after cardiac transplantation to identify antibodies associated with allograft rejection. Protein microarray identified 366 non-HLA antibodies (>1.5 fold, P1R) with an area under the curve of 0.87 (P 
- Published
- 2019
21. Phenotype-Guided Inflammation-Related Long Non-Coding RNA Discovery in Heart Failure Survival Prediction
- Author
-
T. Nakade, David Elashoff, Mario C. Deng, Galyna Bondar, Tristan Grogan, and I. Silacheva
- Subjects
Pulmonary and Respiratory Medicine ,Oncology ,Transplantation ,medicine.medical_specialty ,business.industry ,Disease ,Long non-coding RNA ,Fold change ,GeneCards ,Transcriptome ,Internal medicine ,medicine ,Surgery ,XIST ,KEGG ,Cardiology and Cardiovascular Medicine ,business ,Gene - Abstract
Purpose Disease associated long non-coding RNAs (lncRNAs) may yield biomarkers to assess the risk of disease progression, facilitating treatment decisions. We hypothesize that identification of lncRNA genes related to recovery/survival outcome in Advanced Heart Failure (AdHF) patients after various surgical/interventional therapies (S/IT), and integration of these lncRNAs into our existing independently validated outcome prediction algorithm further improves the survival prediction precision vs clinical parameters alone. Methods Study was conducted on 77 AdHF patients undergoing various S/IT. Clinical data was collected within 30 days before and 1 year post S/IT. All patients were assigned survivor/non survivor status based on 1 year outcome. Blood samples were collected within 30 days pre-intervention. Total RNA was isolated from peripheral blood mononuclear cells (PBMC) for RNAseq genomic/transcriptomic analysis. Raw RNAseq data was aligned to Hg19 build and subjected to DESeq normalization in StrandNGS software (3.2). Genes with fold change of 2.0 were included in the analysis. Biological significance, functional characterization, pathway analysis were assessed using GO annotations/KEGG/DAVID/BioCarta/GeneCards/LNCipedia databases. Results Out of 161 differentially expressed and patented AdHF outcome prediction genes we identified 13 lncRNAs related to 1 year survival/functional recovery. SEPT5-GP1BB was upregulated in AdHF patients surviving after S/IT and its neighbor protein coding genes (SEPT5, GP1BB, synphilin1, PARK2) involved in proteolysis pathway responsible for degrading regulatory proteins, have a role in immune/inflammatory responses. HIF1A-AS2 was upregulated in surviving patients and can be predictive based on its effect on the organ failure/hypoxia induced angiogenesis. XIST was upregulated in surviving patients, it is known to co-occur with at least 14 coding genes. The predictive information of XIST on survival might be linked to its immunomodulatory effect. Conclusion Differentially expressed lncRNA genes from PBMCs are correlated with recovery/1 year survival outcomes in AdHF patients and can be systematically identified by a phenotype guided NGS strategy. Incorporation of lncRNA data will allow for optimization of our existing multidimensional outcome prediction algorithm.
- Published
- 2021
- Full Text
- View/download PDF
22. Independent Validation of a Genomic Heart Failure Survival Prediction Algorithm
- Author
-
Mario C. Deng, Tristan Grogan, Sumeet Deshmukh, David Elashoff, T. Bao, T. Nakade, I. Silacheva, N.S. Kulkarni, and Galyna Bondar
- Subjects
Pulmonary and Respiratory Medicine ,Survival Status ,Transplantation ,business.industry ,Retrospective cohort study ,medicine.disease ,Correlation ,medicine.anatomical_structure ,White blood cell ,Heart failure ,Cohort ,Medicine ,Surgery ,In patient ,Cardiology and Cardiovascular Medicine ,business ,Prospective cohort study ,Algorithm - Abstract
Purpose We previously reported that preoperative differentially expressed genes can predict short-term recovery and long-term survival in patients after mechanical circulatory support (MCS)-surgery. Here, we aimed to train and independently validate an algorithm in a larger mixed-intervention cohort. This algorithm is based on preoperative clinical and transcriptomic data that can predict 1-year survival after various interventions. Methods A retrospective study was conducted on 96 AdHF-patients undergoing MCS-surgery to identify clinical predictors of 1-year survival. Subsequently, a study was conducted on 77 patients evaluated for various AdHF-interventions to train (n=29) and validate (n=48) the algorithm (Table, Figure). In this prospective cohort, blood samples were collected within 30-days pre-intervention. In all studies, clinical data was collected within 30-days before and 1-year post-S/IT. All patients were assigned survivor/non-survivor status based on 1-year post-intervention outcome. Results Age, white blood cell count, respiratory rate, and minimum diastolic blood pressure yielded the highest correlation with 1-year survival status. An algorithm was trained by combining clinical and transcriptomic predictors on 29 samples from AdHF-patients undergoing MCS-surgery. The algorithm was validated on an independent set of 48 samples from patients undergoing various AdHF-interventions. Prediction of 1-year survival using 4 clinical parameters alone achieved an AUC=0.69. Adding 12 differentially expressed genes to the clinical model improved the AUC=0.90 and demonstrated 71% sensitivity, 90% specificity, 56% positive predictive value, and 95% negative predictive value. Conclusion The algorithm can increase accurate survival prediction by AUC>0.1 compared to clinical data alone and warrants further study in larger longitudinal cohorts.
- Published
- 2021
- Full Text
- View/download PDF
23. Heart Failure Therapies for End-Stage Chemotherapy–Induced Cardiomyopathy
- Author
-
Karol E. Watson, Gregg C. Fonarow, Olujimi A. Ajijola, Eric H. Yang, Eugene C. DePasquale, A. Baas, Ali Nsair, Mario C. Deng, and Roy B. Mukku
- Subjects
medicine.medical_specialty ,medicine.medical_treatment ,Adrenergic beta-Antagonists ,Cardiomyopathy ,Cardiac resynchronization therapy ,Angiotensin-Converting Enzyme Inhibitors ,Antineoplastic Agents ,030204 cardiovascular system & hematology ,03 medical and health sciences ,0302 clinical medicine ,Trastuzumab ,Neoplasms ,medicine ,Humans ,Registries ,Intensive care medicine ,Heart Failure ,Heart transplantation ,Cardiotoxicity ,business.industry ,Cancer ,medicine.disease ,Transplantation ,030220 oncology & carcinogenesis ,Heart failure ,Heart Transplantation ,Heart-Assist Devices ,Cardiomyopathies ,Cardiology and Cardiovascular Medicine ,business ,medicine.drug - Abstract
With ongoing advancements in cancer-related treatments, the number of cancer survivors continues to grow globally, with numbers in the United States predicted to reach 18 million by 2020. As a result, it is expected that a greater number of patients will present with chemotherapy-related side effects. One entity in particular, chemotherapy-related cardiomyopathy (CCMP), is a known cardiotoxic manifestation associated with agents such as anthracyclines, trastuzumab, and tyrosine kinase inhibitors. Although such effects have been described in the medical literature for decades, concrete strategies for screening, prevention, and management of CCMP continue to be elusive owing to limited studies. Late recognition of CCMP is associated with a poorer prognosis, including a lack of clinical response to pharmacologic therapy, and end-stage heart failure. A number of advanced cardiac therapies, including cardiac resynchronization therapy, ventricular assist devices, and orthotopic cardiac transplantation, are available to for end-stage heart failure; however, the role of these therapies in CCMP is unclear. In this review, management of end-stage CCMP with the use of advanced therapies and their respective effectiveness are discussed, as well as clinical characteristics of patients undergoing these treatments. The relative paucity of data in this field highlights the importance and need for larger-scale longitudinal studies and long-term registries tracking the outcomes of cancer survivors who have received cardiotoxic cancer therapy to determine the overall incidence of end-stage CCMP, as well as prognostic factors that will ultimately guide such patients toward receiving appropriate end-stage care.
- Published
- 2016
- Full Text
- View/download PDF
24. Advance Care Planning by an Embedded Social Worker for Patients with Advanced Heart Failure Desiring Heart Transplant or Mechanical Circulatory Support (RP316)
- Author
-
Jennie Kung, Neil S. Wenger, Anne Walling, Mario C. Deng, and Codie Lieto
- Subjects
Advance care planning ,medicine.medical_specialty ,Anesthesiology and Pain Medicine ,Social work ,business.industry ,Heart failure ,Circulatory system ,medicine ,Neurology (clinical) ,Intensive care medicine ,medicine.disease ,business ,General Nursing - Published
- 2020
- Full Text
- View/download PDF
25. The Use of AlloMap and AlloSure in Combined Heart-Kidney Transplantation
- Author
-
Shelley A. Hall, Eugene C. DePasquale, M. Kamath, and Mario C. Deng
- Subjects
Pulmonary and Respiratory Medicine ,Transplantation ,medicine.medical_specialty ,Heart disease ,Acute cellular rejection ,business.industry ,medicine.disease ,Comorbidity ,Gastroenterology ,Internal medicine ,Baseline characteristics ,medicine ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,Kidney transplantation ,Kidney disease - Abstract
Purpose Kidney disease is a common comorbidity seen in heart disease, and so the number of patients undergoing combined heart-kidney transplantation (HKT) continues to increase, as well as the number of waitlisted patients for HKT. Recent evidence suggests a favorable immunomodulatory effect for combined HKT, making these patients ideal candidates for non-invasive monitoring for rejection and injury. The use of gene-expression profile testing (AlloMap®) in HKT recipients vs heat transplant (HT) alone has remained uncertain with earlier reports suggesting higher values in HKT, while more recent reports suggesting equivocal results between the two. Additionally, the profile of donor-derived cell-free DNA (dd-cfDNA) (AlloSure®) in HKT has not yet been evaluated. Methods The Utility of dd-cfDNA in Association with Gene Expression Profiling (D-OAR) registry is a prospective, observation study of HT recipients monitored with AlloMap and AlloSure. The D-OAR registry and prospectively collected data from UCLA Medical Center were assessed for patients who underwent HKT with associated AlloSure and AlloMap scores and compared to patients who underwent HT alone. The cumulative distribution functions of AlloMap and AlloSure scores were stratified by HT vs. HKT. Patients with CMV and acute cellular rejection (≥2R) were excluded from the analysis. Results There were 300 HT recipients and 14 HKT recipients. Baseline characteristics were similar between groups. The median AlloMap and AlloSure scores for HT recipients (N=300) were 29 and 0.09% respectively, while for HKT recipients (N=14) AlloMap and AlloSure scores were 33.5 and 0.41% respectively. See table 1 Conclusion There were slightly higher AlloMap scores in HKT vs HT patients, while AlloSure results in HKT were significantly higher. Further work to establish baseline parameters and understand changes to these parameters during rejection episodes would benefit HKT patients by allowing non-invasive monitoring for rejection and graft injury.
- Published
- 2020
- Full Text
- View/download PDF
26. Integrated Machine Learning Approach to Identify Metabolome Fingerprints of Pathological Stages Following Heart Failure Treatment
- Author
-
Ding Wang, Wei Wang, Bilal Mirza, Howard Choi, David A. Liem, Mario C. Deng, and Peipei Ping
- Subjects
business.industry ,Heart failure ,Genetics ,Metabolome ,Medicine ,Computational biology ,business ,medicine.disease ,Molecular Biology ,Biochemistry ,Pathological ,Biotechnology - Published
- 2020
- Full Text
- View/download PDF
27. KEEPING IMMUNE CHECKPOINT INHIBITOR MYOCARDITIS IN CHECK: SIMULTANEOUS VENOARTERIAL ECMO AND IMPELLA SUPPORT AS A BRIDGE TO RECOVERY
- Author
-
Christopher J. Berg, Mario C. Deng, Allison C. Ferriera, Bradley Colton, Rushi V. Parikh, Eric H. Yang, A. Baas, Ashley F Stein-Merlob, and Jeffrey J. Hsu
- Subjects
medicine.medical_specialty ,Myocarditis ,business.industry ,Colorectal cancer ,medicine.medical_treatment ,Immune checkpoint inhibitors ,Immunotherapy ,Status post ,medicine.disease ,Internal medicine ,Cardiology ,Medicine ,Nivolumab ,Cardiology and Cardiovascular Medicine ,business ,Complication ,Impella - Abstract
As immunotherapy use in various malignancies expands, immune checkpoint inhibitor (ICI) myocarditis is a rare but potentially fatal complication requiring a high degree of clinical suspicion for early diagnosis and treatment. A 60 year-old female with colon cancer status post 3 months of nivolumab
- Published
- 2020
- Full Text
- View/download PDF
28. Comparing NGS and NanoString platforms in peripheral blood mononuclear cell transcriptome profiling for advanced heart failure biomarker development
- Author
-
Jim Moose, Xin-Min Li, David Elashoff, Galyna Bondar, Tristan Grogan, Emmanuelle Faure-Kumar, T. Bao, Mario C. Deng, and Wenjie Xu
- Subjects
next generation sequencing ,Survival Status ,0303 health sciences ,prediction test ,Computational biology ,030204 cardiovascular system & hematology ,Gene signature ,Biology ,Benchmark ,Peripheral blood mononuclear cell ,advanced heart failure ,Pearson product-moment correlation coefficient ,DNA sequencing ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Gene expression ,NanoString ,symbols ,biomarker ,General Earth and Planetary Sciences ,Transcriptome profiling ,Gene Discovery ,030304 developmental biology ,General Environmental Science - Abstract
In preparation to create a clinical assay that predicts 1-year survival status of advanced heart failure (AdHF) patients before surgical/interventional therapies and to select the appropriate clinical assay platform for the future assay, we compared the properties of next generation sequencing (NGS) used in the gene discovery phase to the NanoString platform used in the clinical assay development phase. In 25 AdHF patients in a tertiary academic medical center from 2015 to 2016, PBMC samples were collected and aliquoted for NGS RNA whole transcriptome sequencing and compared to 770 genes represented on NanoString’s PanCancer IO 360 Gene Expression research panel. Prior to statistical analysis, NanoString and NGS expression values were log transformed. We computed Pearson correlation coefficients for each sample, comparing gene expression values between NanoString and NGS across the set of matched genes and for each of the matched genes across the set of samples. Genes were grouped by average NGS expression, and the NanoString-NGS correlation for each group was computed. Out of 770 genes from the NanoString panel, 734 overlapped between both platforms and showed high intrasample correlation. Within an individual sample, there was an expression-level dependent correlation between both platforms. The low- vs. intermediate/high-expression groups showed NGS average correlation 0.21 vs. 0.58–0.68, respectively, and NanoString average correlation 0.07–0.34 vs. 0.59–0.70, respectively. NanoString demonstrated high reproducibility (R2 > 0.99 for 100 ng input), sensitivity (probe counts between 100 and 500 detected and quantified), and robustness (similar gene signature scores across different RNA input concentrations, cartridges, and outcomes). Data from NGS and NanoString were highly correlated. These platforms play a meaningful, complementary role in the biomarker development process.
- Published
- 2020
- Full Text
- View/download PDF
29. Systems Genetics Approach to Biomarker Discovery: GPNMB and Heart Failure in Mice and Humans
- Author
-
Christoph Rau, Simon T. Hui, Galyna Bondar, Shuxun Ren, Aldons J. Lusis, Janet S. Sinsheimer, Mario C. Deng, Markku Laakso, Jim O’Hearn, Adriana Huertas-Vazquez, Jessica Wang, Marcus M. Seldin, Pritha P. Gupta, Sunny C Chang, Yibin Wang, Liang-Yu Lin, Arjun Deb, Raimo Jauhiainen, and Johanna Kuusisto
- Subjects
0301 basic medicine ,Male ,Biomarkers, GPNMB ,Galectin 3 ,030204 cardiovascular system & hematology ,QH426-470 ,Inbred C57BL ,Cardiovascular ,Transcriptome ,Mice ,0302 clinical medicine ,Inbred strain ,2.1 Biological and endogenous factors ,Aetiology ,Biomarker discovery ,Genetics (clinical) ,Systems genetics ,education.field_of_study ,Membrane Glycoproteins ,Middle Aged ,3. Good health ,Heart Disease ,Female ,Biotechnology ,Systems genetics, Transcriptome ,Population ,Heart failure ,Investigations ,Biology ,GPNMB ,03 medical and health sciences ,Clinical Research ,medicine ,Genetics ,Animals ,Humans ,education ,Eye Proteins ,Molecular Biology ,Aged ,Tissue Inhibitor of Metalloproteinase-1 ,Animal ,Human Genome ,Computational Biology ,Tissue inhibitor of metalloproteinase ,medicine.disease ,Mice, Inbred C57BL ,Disease Models, Animal ,030104 developmental biology ,Disease Models ,Cancer research ,Metabolic syndrome ,Biomarkers - Abstract
We describe a simple bioinformatics method for biomarker discovery that is based on the analysis of global transcript levels in a population of inbred mouse strains showing variation for disease-related traits. This method has advantages such as controlled environment and accessibility to heart and plasma tissue in the preclinical selection stage. We illustrate the approach by identifying candidate heart failure (HF) biomarkers by overlaying mouse transcriptome and clinical traits from 91 Hybrid Mouse Diversity Panel (HMDP) inbred strains and human HF transcriptome from the Myocardial Applied Genomics Network (MAGNet) consortium. We found that some of the top differentially expressed genes correlated with known human HF biomarkers, such as galectin-3 and tissue inhibitor of metalloproteinase 1. Using ELISA assays, we investigated one novel candidate, Glycoprotein NMB, in a mouse model of chronic β-adrenergic stimulation by isoproterenol (ISO) induced HF. We observed significantly lower GPNMB plasma levels in the ISO model compared to the control group (p-value = 0.007). In addition, we assessed GPNMB plasma levels among 389 HF cases and controls from the METabolic Syndrome In Men (METSIM) study. Lower levels of GPNMB were also observed in patients with HF from the METSIM study compared to non-HF controls (p-value < 0.0001). In summary, we have identified several candidate biomarkers for HF using the cardiac transcriptome data in a population of mice that may be directly relevant and applicable to human populations.
- Published
- 2018
- Full Text
- View/download PDF
30. Understanding the Correlation Between DSA, Complement Activation, and Antibody-Mediated Rejection in Heart Transplant Recipients
- Author
-
Mario C. Deng, Murray Kwon, A. Baas, Elaine F. Reed, Michael C. Fishbein, Juan C. Alejos, Richard J. Shemin, Eugene C. DePasquale, Gregory Perens, David W. Gjertson, Nancy Halnon, Qiuheng Zhang, Martin Cadeiras, T. Khuu, Nsair Ali, Abbas Ardehali, Daniel Cruz, Diana Drogalis-Kim, Ying Zheng, and Michelle J. Hickey
- Subjects
Graft Rejection ,Male ,medicine.medical_treatment ,Kaplan-Meier Estimate ,030230 surgery ,Cardiovascular ,Medical and Health Sciences ,Coronary artery disease ,0302 clinical medicine ,HLA Antigens ,Isoantibodies ,Young adult ,Child ,Complement Activation ,biology ,Histocompatibility Testing ,Incidence ,Graft Survival ,Middle Aged ,Tissue Donors ,Heart Disease ,Treatment Outcome ,Complement C3d ,Child, Preschool ,030211 gastroenterology & hepatology ,Female ,Antibody ,Adult ,medicine.medical_specialty ,Adolescent ,Heart Diseases ,Urology ,Human leukocyte antigen ,Article ,03 medical and health sciences ,Young Adult ,medicine ,Lung transplantation ,Humans ,Clinical significance ,Preschool ,Transplantation ,business.industry ,Infant ,Immunotherapy ,Organ Transplantation ,medicine.disease ,body regions ,biology.protein ,Heart Transplantation ,Surgery ,Heart-Assist Devices ,business - Abstract
BackgroundDonor-specific HLA antibodies (DSA) are associated with increased rates of rejection and of graft failure in cardiac transplantation. The goal of this study was to determine the association of preformed and posttransplant development of newly detected DSA (ndDSA) with antibody-mediated rejection (AMR) and characterize the clinical relevance of complement-activating DSA in heart allograft recipients.MethodsThe study included 128 adult and 48 pediatric heart transplant patients transplanted between 2010 and 2013. Routine posttransplant HLA antibody testing was performed by IgG single-antigen bead test. The C3d single-antigen bead assay was used to identify complement-activating antibodies. Rejection was diagnosed using International Society for Heart and Lung Transplantation criteria.ResultsIn this study, 22 patients were transplanted with preexisting DSA, and 43 patients developed ndDSA posttransplant. Pretransplant (P < 0.05) and posttransplant (P < 0.001) ndDSA were associated with higher incidence of AMR. Patients with C3d + DSA had significantly higher incidence of AMR compared with patients with no DSA (P < 0.001) or patients with C3d-DSA (P = 0.02). Nine (36%) of 25 patients with AMR developed transplant coronary artery disease compared with 17 (15.9%) of 107 patients without AMR (P < 0.05). Among the 47 patients who received ventricular assistant device (VAD), 7 of 9 VAD+ patients with preformed DSA experienced AMR compared with 7 of 38 VAD+ patients without preformed DSA, indicating presensitization to donor HLA significantly increased the risk of AMR (P < 0.01).ConclusionsPreformed and posttransplant ndDSA were associated with AMR. C3d + DSA correlates with complement deposition on the graft and higher risk of AMR which may permit the application of personalized immunotherapy targeting the complement pathway.
- Published
- 2018
31. Is relational medicine the key to providing truly personalized high-tech modern medicine?
- Author
-
Federica Raia and Mario C. Deng
- Subjects
Pharmacology ,medicine.medical_specialty ,Modern medicine ,Traditional medicine ,business.industry ,Personhood ,Systems biology ,Alternative medicine ,General Medicine ,Data science ,Causality ,High tech ,medicine ,Key (cryptography) ,Molecular Medicine ,business - Published
- 2018
32. A peripheral blood transcriptome biomarker test to diagnose functional recovery potential in advanced heart failure
- Author
-
Mario C. Deng
- Subjects
Male ,Risk ,medicine.medical_specialty ,Sympathetic nervous system ,ventricular tachycardia ablation ,medicine.medical_treatment ,Clinical Biochemistry ,030204 cardiovascular system & hematology ,Revascularization ,heart transplantation ,Transcriptome ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Internal medicine ,Drug Discovery ,medicine ,Humans ,030212 general & internal medicine ,Coronary Artery Bypass ,Aged ,Heart transplantation ,Heart Failure ,mechanical circulatory support ,business.industry ,Biochemistry (medical) ,Organ dysfunction ,functional recovery potential ,shared decision-making ,Recovery of Function ,medicine.disease ,relational medicine ,advanced heart failure ,3. Good health ,medicine.anatomical_structure ,Heart failure ,Perspective ,Cardiology ,Biomarker (medicine) ,biomarker ,Female ,revascularization ,medicine.symptom ,valve replacement ,business ,Biomarkers - Abstract
Heart failure (HF) is a complex clinical syndrome that causes systemic hypoperfusion and failure to meet the body’s metabolic demands. In an attempt to compensate, chronic upregulation of the sympathetic nervous system and renin-angiotensin-aldosterone leads to further myocardial injury, HF progression and reduced O2delivery. This triggers progressive organ dysfunction, immune system activation and profound metabolic derangements, creating a milieu similar to other chronic systemic diseases and presenting as advanced HF with severely limited prognosis. We hypothesize that 1-year survival in advanced HF is linked to functional recovery potential (FRP), a novel clinical composite parameter that includes HF severity, secondary organ dysfunction, co-morbidities, frailty, disabilities as well as chronological age and that can be diagnosed by a molecular biomarker.
- Published
- 2018
33. Heart and heart-liver transplantation in adults with failing Fontan physiology
- Author
-
Ali Nsair, Jamil Aboulhosn, Jana Tarabay, Leigh C. Reardon, Fady M. Kaldas, Robert S. Venick, Jeannette Lin, Ronald W. Busuttil, Mario C. Deng, Hillel Laks, Abbas Ardehali, Sammy Saab, Amit Iygengar, Eugene C. DePasquale, Martin Caderias, Daniel Cruz, and Reshma Biniwale
- Subjects
Adult ,Male ,medicine.medical_specialty ,Cirrhosis ,Heart disease ,Adolescent ,medicine.medical_treatment ,Population ,030204 cardiovascular system & hematology ,Liver transplantation ,Fontan Procedure ,Fontan procedure ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Biopsy ,medicine ,Humans ,030212 general & internal medicine ,education ,Child ,Aged ,Retrospective Studies ,Heart Failure ,Transplantation ,education.field_of_study ,medicine.diagnostic_test ,business.industry ,Palliative Care ,Middle Aged ,medicine.disease ,Prognosis ,Surgery ,Liver Transplantation ,Child, Preschool ,Heart Transplantation ,Female ,Outcomes research ,business ,Follow-Up Studies - Abstract
Background As the population of patients with a Fontan palliation grows so does, the number of patients with cardiac failure necessitating orthotopic heart transplant (OHT) and combined heart-liver transplant (CHLT). There is recent evidence that current era cardiac transplant in Fontan patients has improved outcomes, but most studies have a preponderance of pediatrics patients in their cohorts. We examine our institutional experience with adult OHT and CHLT transplantation for failed Fontan physiology. Methods and results Retrospective analysis of patients at the Ahmanson/UCLA Adult Congenital Heart Disease Center who underwent OHT or CHLT for failing Fontan physiology from January 1, 2002 to May 31, 2017. We identified 20 patients with single-ventricle physiology and Fontan palliation who underwent OHT or CHLT. The median age was 29.5 years (range 19-44). Five patients underwent CHLT because of biopsy proven hepatic cirrhosis. The median length of hospital stay was 23 days (range 8-76) post-OHT and 51 days (range 26-77) post-CHLT. During a median follow-up of 56 months (range 2-178), there was one mortality occurring at 34 months post-OHT due to coronary vasculopathy. Most frequent early postoperative complications included bleeding and infection (55% and 20%, respectively) and surgical reintervention for bleeding complications (n = 8, 40%). One CHLT patient experienced clinically significant hepatic rejection requiring admission and steroid treatment. Conclusions Despite inherent risks and complexities of OHT or CHLT in patients with a failed Fontan, transplant is a reasonable therapy. Peri- and postoperative complications are common and may require surgical reintervention. Continued observation of practices and unifying themes may help improve patient selection, pre- and postoperative treatment and ultimately outcomes.
- Published
- 2018
34. Molecular Microscope Determinants of Graft Survival in the INTERHEART Study
- Author
-
Eugene C. DePasquale, Daniel Kim, Peter S. Macdonald, Arezu Aliabadi, Luciano Potena, Michael D. Parkes, Philip F. Halloran, Martin Cadeiras, Andreas Zuckermann, Jeff Reeve, Alexandre Loupy, Jon A. Kobashigawa, J. Goekler, Mario C. Deng, and Marisa G. Crespo-Leiro
- Subjects
Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,Graft failure ,medicine.medical_treatment ,Population ,Urology ,030230 surgery ,03 medical and health sciences ,0302 clinical medicine ,Biopsy ,medicine ,education ,Transplantation ,education.field_of_study ,Kidney ,medicine.diagnostic_test ,business.industry ,Gene sets ,Immunosuppression ,medicine.anatomical_structure ,Renal transplant ,030211 gastroenterology & hepatology ,Surgery ,Graft survival ,Cardiology and Cardiovascular Medicine ,business - Abstract
Purpose In heart and kidney transplants, rejection is a major cause of graft loss. In kidneys, antibody-mediated rejection (ABMR) is more important than T cell-mediated rejection (TCMR), and molecules predict graft loss better than histology (JASN 26 (7):1711-1720, 2015). We examined the relative importance of ABMR vs TCMR in heart transplant endomyocardial biopsies (EMBs), and the molecules predicting graft survival. Methods The INTERHEART population includes 1219 transplant biopsies from 8 centers in Canada, USA, Australia and Europe. Gene expression was studied using microarrays, selecting the most recent biopsy per patient. Random forest classifiers were used to assess predictive accuracy and determine the importance of molecular predictors, including gene sets and scores from analyses in a reference set of 889 EMBs. Results We studied 3-year survival in 484 patients with follow-up times. Graft failure occurred in 60 patients. Median follow-up was 435 days; biopsies were mainly for indications. Surprisingly, TCMR was a greater short-term hazard than ABMR. The molecular archetype clusters for TCMR and injury (Fig. 1) had the highest risk of graft failure. Fig. 2 combines these clusters since they have similar characteristics. Conclusion Unlike kidneys, graft loss (particularly within one year) after EMB is highly associated with TCMR but not ABMR. TCMR may reflect failure of immunosuppression or non-adherence. This difference between the heart and renal transplant populations raises the possibility that TCMR is relatively more destructive, and ABMR less destructive, in heart than in kidney transplants. ClinicalTrials.gov # NCT02670408
- Published
- 2019
- Full Text
- View/download PDF
35. Genomic Prediction of One Year Survival Status Related to Functional Recovery Potential in Advanced Heart Failure Patients Undergoing Mechanical Circulatory Support
- Author
-
M. Kamath, Xin-Min Li, A. Le, Joanna Schaenman, Murray Kwon, V. Groysberg, A. Aliyari, E. Higuchi, Maura Rossetti, S. Kupiec-Weglinski, Peipei Ping, Divya Lakshmi Bhaskar, Martin Cadeiras, Galyna Bondar, Mario C. Deng, David A. Liem, David Elashoff, Elaine F. Reed, Joseph S. Meltzer, Eugene C. DePasquale, R. Dod, T. Bao, M. Kurani, L. Masukawa, K. Patel, E. Oh, M. Bakir, and Y. Khachatoorian
- Subjects
Pulmonary and Respiratory Medicine ,Oncology ,Survival Status ,Transplantation ,medicine.medical_specialty ,business.industry ,Functional recovery ,medicine.disease ,Peripheral blood mononuclear cell ,Log-rank test ,Transcriptome ,Heart failure ,Internal medicine ,Circulatory system ,medicine ,Biomarker (medicine) ,Surgery ,Cardiology and Cardiovascular Medicine ,business - Abstract
Purpose Multiorgan Dysfunction Syndrome (MOD) contributes to adverse outcomes in advanced heart failure (AdHF) patients after mechanical circulatory support (MCS) implantation and is associated with aberrant Peripheral Blood Mononuclear Cells (PBMC) activity. We hypothesize that a subset of previously reported 12 preoperative differentially expressed genes (DEGs) correlating with both, Functional Recovery Potential (FRP) (28 genes) and One Year Survival (1YS) (105 genes) [Bondar 2017], could directly predict FRP-related 1YS after MCS surgery. Methods In 29 patients undergoing MCS-surgery in a tertiary academic medical center from 2012 to 2014, PBMC samples were collected on day-1. Clinical data were collected on day-1, day 8 and 1 year after surgery. FRP was classified as Improving if SOFA+MELD-XI scores improved from day -1 to day 8 (n=17) and Non-improving if either one or both scores did not improve from day -1 to day 8 (n=12). The 1YS showed 18 Surviving and 11 Non-surviving patients. Next-generation RNA sequencing transcriptome analysis was performed on purified mRNA and analyzed using Strand NGS. DEGs were identified by Mann-Whitney test with Benjamini-Hochberg correction. We used a support vector machine algorithm to predict FRP- and 1YS-status. Results 1YS was 88% in Improving and 27% in Non-improving groups (log rank p=0.00182). The 12 preoperative DEGs predicted 1YS (accuracy 86%). Hierarchical Clustering analysis (Figures 1A and 1B) demonstrated the consistent expression pattern between FRP and 1YS, suggesting a biological link, supported by gene ontology and pathway analyses. Conclusion In AdHF patients undergoing MCS, the previously reported 12 genes could directly predict the FRP-related 1-year survival. We currently explore the utility of this PBMC biomarker to improve outcome prediction for AdHF patients undergoing various high-risk interventions [Deng 2018].
- Published
- 2019
- Full Text
- View/download PDF
36. Use of Donor HCV NAT Positive Hearts: Expanding the Donor Pool?
- Author
-
Mario C. Deng, C. Lum, Martin Cadeiras, D. Vucicevic, A. Chang, K. Pandya, A. Salimbangon, R. Chand, William S. Ragalie, Eugene C. DePasquale, Abbas Ardehali, and T. Khuu
- Subjects
Pulmonary and Respiratory Medicine ,endocrine system ,Transplantation ,education.field_of_study ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,fungi ,Population ,Hazard ratio ,medicine.disease ,Single Center ,HLA Mismatch ,Gastroenterology ,body regions ,Nat ,Diabetes mellitus ,Internal medicine ,Medicine ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,education ,Donor pool ,Dialysis - Abstract
Purpose Use of HCV NAT+ donor hearts may aid in expanding the donor pool. However, limited single center data exist. We aim to assess the short-term impact of use of HCV NAT+ hearts in a national dataset. Methods 8256 HT patients with reported donor HCV NAT status were identified from UNOS (2010-2018), of which 88 received an HCV NAT positive (HCV+) donor. Exclusions included age proportional hazard regression analysis (adjusted for age, sex, diabetes , race, ischemic time , dialysis, life support & HLA mismatch) was performed. Results 88 pts underwent successful HT with HCV NAT positive donors. Predominant etiologies did not differ (p=0.169). During study period, 826 pts died post HT (NAT + vs -: 9.1 vs 10.0, p=0.77). Crude 1, 6 & 12 m post-HT survival was NAT+ [96, 91, 82%] vs NAT- [97, 93, 91%] (log-rank, p Multivariate analysis yielded a hazard ratio of 1.45 (CI 0.65-3.28) comparing NAT+ to NAT- recipients. Conclusion Short-term survival is similar between HCV NAT+ versus NAT- HT recipients. This data is promising and represents a step forward in expanding the donor pool. Further study is warranted to assess the long-term impact of this donor population.
- Published
- 2019
- Full Text
- View/download PDF
37. Phosphorylated S6 kinase and S6 ribosomal protein are diagnostic markers of antibody-mediated rejection in heart allografts
- Author
-
Qiuheng Zhang, Michael C. Fishbein, David W. Gjertson, Jennifer Wei, Mario C. Deng, Fang Li, Jon A. Kobashigawa, Chi Lai, Elaine F. Reed, and Nicole Valenzuela
- Subjects
Adult ,Graft Rejection ,Male ,Pulmonary and Respiratory Medicine ,MAPK/ERK pathway ,Pathology ,medicine.medical_specialty ,medicine.medical_treatment ,P70-S6 Kinase 1 ,Human leukocyte antigen ,Antibodies ,Article ,medicine ,Humans ,Phosphorylation ,Heart transplantation ,Ribosomal Protein S6 ,Transplantation ,business.industry ,Kinase ,Ribosomal Protein S6 Kinases ,Ribosomal protein s6 ,Heart Transplantation ,Immunohistochemistry ,Female ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,Biomarkers ,Immunostaining - Abstract
Background Anti-MHC Class I alloantibodies have been implicated in the processes of acute and chronic rejection. These antibodies (Ab) bind to endothelial cells (EC) and transduce signals leading to the activation of cell survival and proliferation pathways, including Src, FAK and mTOR, as well as downstream targets ERK, S6 kinase (S6K) and S6 ribosomal protein (S6RP). We tested the hypothesis that phosphorylation of S6K, S6RP and ERK in capillary endothelium may serve as an adjunct diagnostic tool for antibody-mediated rejection (AMR) in heart allografts. Methods Diagnosis of AMR was based on histology or immunoperoxidase staining of paraffin-embedded tissue, consistent with 2013 ISHLT criteria. Diagnosis of acute cellular rejection (ACR) was based on ISHLT criteria. Endomyocardial biopsies from 67 heart transplant recipients diagnosed with acute rejection [33 with pAMR, 18 with ACR (15 with Grade 1R, 3 with Grade ≥2R), 16 with pAMR and ACR (13 with 1R and 3 with ≥2R)] and 40 age- and gender-matched recipients without rejection were tested for the presence of phosphorylated forms of ERK, S6RP and S6K by immunohistochemistry. Results Immunostaining of endomyocardial biopsies with evidence of pAMR showed a significant increase in expression of p-S6K and p-S6RP in capillary EC compared with controls. A weaker association was observed between pAMR and p-ERK. Conclusions Biopsies diagnosed with pAMR often showed phosphorylation of S6K and S6RP, indicating that staining for p-S6K and p-S6RP is useful for the diagnosis of AMR. Our findings support a role for antibody-mediated HLA signaling in the process of graft injury.
- Published
- 2015
- Full Text
- View/download PDF
38. Perceived control and health-related quality of life in heart transplant recipients
- Author
-
Lynn V. Doering, Donna M. Mancini, Belinda Chen, Jon A. Kobashigawa, Kathleen T. Hickey, and Mario C. Deng
- Subjects
Adult ,Male ,Mediation (statistics) ,Adolescent ,medicine.medical_treatment ,030204 cardiovascular system & hematology ,Article ,03 medical and health sciences ,0302 clinical medicine ,Quality of life ,Adaptation, Psychological ,Medicine ,Humans ,Perceived control ,Depression (differential diagnoses) ,Aged ,Advanced and Specialized Nursing ,Heart transplantation ,030504 nursing ,business.industry ,Middle Aged ,Mental health ,Anxiety Disorders ,humanities ,Transplant Recipients ,Transplantation ,Medical–Surgical Nursing ,Cross-Sectional Studies ,Quality of Life ,Anxiety ,Heart Transplantation ,Female ,medicine.symptom ,0305 other medical science ,Cardiology and Cardiovascular Medicine ,business ,Clinical psychology - Abstract
Background:Perceived control has been associated with improved mental health and health-related quality of life (HRQOL) in cardiac populations. However, this concept has not been well-studied in heart transplant groups.Aims:We examine the relationship of perceived control to symptoms of anxiety and depression and HRQOL after transplant. We also examine the extent to which anxiety and depressive symptoms mediate the relationship between perceived control and HRQOL.Methods:Our cross-sectional analysis included 113 adult heart transplant patients from the NEW HEART study. High versus low perceived control groups were determined by median split for chi-square and t-test analyses. Hierarchical multiple linear regression models were used to examine the influence of perceived control on symptoms of depression and anxiety and HRQOL. Mediation analyses included Baron and Kenny’s four-step regression approach and Preacher and Hayes’ bootstrapping technique to test the indirect effect of perceived control on HRQOL.Results:Heart transplant patients who reported lower perceived control were more likely to be female ( p=0.003), and had significantly more depressive symptoms ( pConclusion:Perceived control is associated with improved depressive and anxiety symptoms and HRQOL after transplant. The relationship between perceived control and HRQOL is mediated by depressive and anxiety symptoms. Future interventions should target perceived control to improve overall HRQOL.
- Published
- 2017
39. Abstract 21384: UNOS 1A Listing Trends in LVAD (Left Ventricular Assist Device) Recipients
- Author
-
Anthony Salimbangon, Darko Vucicevic, Amy Chang, Mario C Deng, and Eugene DePasquale
- Subjects
Physiology (medical) ,Cardiology and Cardiovascular Medicine - Abstract
Introduction: LVAD utilization has increased in the face of continuing donor shortage. These patients may remain at the highest urgency status of UNOS 1A electively for 30 days. Upon completion of this time, LVAD patients may only regain this status with device complications. Trends in device complications of those undergoing HT have not been well-described. We sought to assess the trend of 1A exceptions in this population. Methods: 3551 HT recipients bridged with LVAD of 10,634 were identified from UNOS (2000-2015) were stratified by UNOS 1A listing exception: device infection, thromboembolism, device malfunction, life-threatening ventricular arrhythmia or other. Exclusions: age Results: 3551 HT recipients bridged with LVAD with the following 1A exceptions: device infection (n=1516), thromboembolism (n=517), device malfunction (n=585), life-threatening ventricular arrhythmia (n=196) and other (n=737). During the study period, listing for each of these complications increased over time (Figure). Overall survival in patients listed with MCS exception was (1, 5 & 10y): 87, 74 & 56%. Survival by 1A exception is shown in Figure. Survival was significantly reduced in those with device infection (1, 5 & 10y: 85, 70, 50%; log rank, p=0.007). Conclusions: UNOS 1A listing exceptions in LVAD patients have increased over time. Despite this increase, short and long-term survival does not appear to be impacted with the exception of device infection. Further study is warranted to explore this increase in exceptions and impaired outcomes in the device infection population.
- Published
- 2017
- Full Text
- View/download PDF
40. Cardiac Amyloidosis: Diagnosis and Treatment Strategies
- Author
-
A. Baas, Mirela Tuzovic, Eugene C. DePasquale, Eric H. Yang, Gabriel Vorobiof, Daniel Cruz, and Mario C. Deng
- Subjects
Pathology ,medicine.medical_specialty ,Amyloid ,Immunoglobulins ,030204 cardiovascular system & hematology ,Early Therapy ,030218 nuclear medicine & medical imaging ,Immunoglobulin Light-chain Amyloidosis ,03 medical and health sciences ,0302 clinical medicine ,Cardiac magnetic resonance imaging ,AL amyloidosis ,Medicine ,Humans ,Prealbumin ,Amyloid Neuropathies, Familial ,biology ,medicine.diagnostic_test ,business.industry ,Myocardium ,medicine.disease ,Pathophysiology ,Transthyretin ,Oncology ,Cardiac amyloidosis ,Echocardiography ,biology.protein ,business ,Infiltration (medical) - Abstract
Cardiac amyloidosis in the United States is most often due to myocardial infiltration by immunoglobulin protein, such as in AL amyloidosis, or by the protein transthyretin, such as in hereditary and senile amyloidosis. Cardiac amyloidosis often portends a poor prognosis especially in patients with systemic AL amyloidosis. Despite better understanding of the pathophysiology of amyloid, many patients are still diagnosed late in the disease course. This review investigates the current understanding and new research on the diagnosis and treatment strategies in patients with cardiac amyloidosis. Myocardial amyloid infiltration distribution occurs in a variety of patterns. Structural and functional changes on echocardiography can suggest presence of amyloid, but CMR and nuclear imaging provide important complementary information on amyloid burden and the amyloid subtype, respectively. While for AL amyloid, treatment success largely depends on early diagnosis, for ATTR amyloid, new investigational agents that reduce production of transthyretin protein may have significant impact on clinical outcomes. Advancements in the non-invasive diagnostic detection and improvements in early disease recognition will undoubtedly facilitate a larger proportion of patients to receive early therapy when it is most effective.
- Published
- 2017
41. Clinical outcomes and risk factors of coronary artery aneurysms after successful percutaneous coronary intervention and drug-eluting stent implantation for chronic total occlusions
- Author
-
Junbo Ge, Mario C. Deng, Xin Zhong, Kang Yao, Hua Li, Chenguang Li, Xinggang Wang, Youen Zhang, Nobel C. Zong, Wenbin Zhang, C. Y. X'avia Chan, Juying Qian, Xing Wu, David A. Liem, Kai Hu, Xue-bo Liu, Lei Ge, and Shuning Zhang
- Subjects
Coronary artery aneurysm ,medicine.medical_specialty ,business.industry ,Chronic total coronary occlusion ,medicine.medical_treatment ,Hazard ratio ,Ostial occlusion ,Stent ,Percutaneous coronary intervention ,medicine.disease ,Revascularization ,Surgery ,Drug-eluting stent ,Internal medicine ,Conventional PCI ,medicine ,Cardiology ,Parallel wire technique ,Myocardial infarction ,cardiovascular diseases ,Cardiology and Cardiovascular Medicine ,business - Abstract
Objective The study aimed to analyze the risk factors and long-term outcomes associated with coronary artery aneurysms (CAAs) after successful percutaneous coronary intervention (PCI) and drug-eluting stent (DES) implantation in patients with CTOs. Background There are sporadic data available on post-procedure CAAs after transcatheter revascularization for CTOs. Methods and results A total of 141 patients with 149 CTOs who underwent successful CTO-PCI and DES implantation with angiographic follow-up from 2004 to 2010 were included. Patients were divided into CAA group and non-CAA group according to the presence of CAAs in the follow-up angiography. The independent predictors and major adverse cardiac events (MACEs) including cardiac death, myocardial infarction (MI) and target-vessel revascularization (TVR) were compared between two groups. The incidence of CAAs was 11.4% (17/149) after index procedure. Multivariate analysis showed that age (OR: 0.925, CI 0.873–0.980, P = 0.008), ostial occlusion (OR: 6.715, CI 1.473–30.610, P = 0.014), the parallel wire technique (OR: 6.167, CI 1.709–22.259, P = 0.005) and DES length (OR: 1.030, CI 1.002–1.058, P = 0.036) were the independent predictors of CAAs after successful CTO-PCI and DES implantation. MACEs were similar between two groups (adjusted hazard ratio 0.670; 95% CI 0.160–2.808; P = 0.584) during the 5-year follow-up. Conclusions The independent predictors of CAAs after successful CTO-PCI and DES implantation are age, ostial occlusion, the parallel wire technique and DES length. CAAs after index procedure are not frequently associated with adverse clinical events under dual antiplatelet therapy. Further large clinical studies are warranted to explore the clinical implications of patients with this distinct new entity.
- Published
- 2014
- Full Text
- View/download PDF
42. Protein kinetic signatures of the remodeling heart following isoproterenol stimulation
- Author
-
Maggie P.Y. Lam, Chenguang Liu, Martin Cadeiras, Dominic C. M. Ng, Edward Lau, Jason D. Tabaraki, Ding Wang, Yibin Wang, Peipei Ping, David A. Liem, Xiangbo Liang, Brian J. Bleakley, Allen K. Kim, and Mario C. Deng
- Subjects
Adult ,Male ,1.1 Normal biological development and functioning ,Immunology ,Muscle Proteins ,Bioengineering ,Computational biology ,Mitochondrion ,Biology ,Cardiovascular ,Bioinformatics ,Proteomics ,Medical and Health Sciences ,Mitochondria, Heart ,Mass Spectrometry ,Mice ,Underpinning research ,In vivo ,medicine ,Animals ,Humans ,2.1 Biological and endogenous factors ,Calcium Signaling ,Deuterium Oxide ,Aetiology ,Heart metabolism ,Calcium signaling ,Heart Failure ,Mice, Inbred ICR ,Myocardium ,Isoproterenol ,Protein turnover ,Proteins ,Heart ,General Medicine ,Adrenergic beta-Agonists ,medicine.disease ,Inbred ICR ,Mitochondria ,Kinetics ,Heart Disease ,Proteostasis ,Technical Advance ,Networking and Information Technology R&D (NITRD) ,Heart failure - Abstract
Protein temporal dynamics play a critical role in time-dimensional pathophysiological processes, including the gradual cardiac remodeling that occurs in early-stage heart failure. Methods for quantitative assessments of protein kinetics are lacking, and despite knowledge gained from single-protein studies, integrative views of the coordinated behavior of multiple proteins in cardiac remodeling are scarce. Here, we developed a workflow that integrates deuterium oxide (2H2O) labeling, high-resolution mass spectrometry (MS), and custom computational methods to systematically interrogate in vivo protein turnover. Using this workflow, we characterized the in vivo turnover kinetics of 2,964 proteins in a mouse model of β-adrenergic–induced cardiac remodeling. The data provided a quantitative and longitudinal view of cardiac remodeling at the molecular level, revealing widespread kinetic regulations in calcium signaling, metabolism, proteostasis, and mitochondrial dynamics. We translated the workflow to human studies, creating a reference dataset of 496 plasma protein turnover rates from 4 healthy adults. The approach is applicable to short, minimal label enrichment and can be performed on as little as a single biopsy, thereby overcoming critical obstacles to clinical investigations. The protein turnover quantitation experiments and computational workflow described here should be widely applicable to large-scale biomolecular investigations of human disease mechanisms with a temporal perspective.
- Published
- 2014
- Full Text
- View/download PDF
43. Management of ACCF/AHA Stage C Heart Failure
- Author
-
Mario C. Deng, Sasikanth Adigopula, Rey P. Vivo, Ali Nsair, and Eugene C. DePasquale
- Subjects
Digoxin ,medicine.medical_specialty ,Cardiotonic Agents ,Vasodilator Agents ,medicine.medical_treatment ,Adrenergic beta-Antagonists ,Population ,Cardiac resynchronization therapy ,Angiotensin-Converting Enzyme Inhibitors ,Context (language use) ,Cardiac Resynchronization Therapy ,Angiotensin Receptor Antagonists ,Patient Education as Topic ,Serelaxin ,Internal medicine ,medicine ,Humans ,Obesity ,Coronary Artery Bypass ,Diuretics ,education ,Mineralocorticoid Receptor Antagonists ,Heart Failure ,Sleep Apnea, Obstructive ,education.field_of_study ,Ejection fraction ,business.industry ,Mitral Valve Insufficiency ,General Medicine ,Diet, Sodium-Restricted ,medicine.disease ,Defibrillators, Implantable ,Exercise Therapy ,Heart failure ,Cardiology ,Patient Compliance ,Cardiology and Cardiovascular Medicine ,business ,Heart failure with preserved ejection fraction - Abstract
ACC Stage C heart failure includes those patients with prior or current symptoms of heart failure in the context of an underlying structural heart problem who are primarily managed with medical therapy. Although there is guideline-based medical therapy for those with heart failure with reduced ejection fraction (HFrEF), therapies in heart failure with preserved ejection fraction (HFpEF) have thus far proven elusive. Emerging therapies such as serelaxin are currently under investigation and may prove beneficial. The role of advanced surgical therapies, such as mechanical circulatory support, in this population is not well defined. Further investigation is warranted for these therapies in patients with Stage C heart failure.
- Published
- 2014
- Full Text
- View/download PDF
44. Molecular Assessment of Heart Transplant Biopsies
- Author
-
Luciano Potena, Mario C. Deng, Daniel Kim, Philip F. Halloran, Peter S. Macdonald, Michael D. Parkes, Jeff Reeve, Jon A. Kobashigawa, J. Goekler, Eugene C. DePasquale, Marisa G. Crespo-Leiro, Martin Cadeiras, Andreas Zuckermann, Arezu Aliabadi, Patrick Bruneval, and Alexandre Loupy
- Subjects
03 medical and health sciences ,Transplantation ,medicine.medical_specialty ,0302 clinical medicine ,Dimension (vector space) ,business.industry ,Internal medicine ,Cardiology ,Medicine ,030230 surgery ,business - Published
- 2018
- Full Text
- View/download PDF
45. Bridging to Heart Transplantation (BTT) in Seputagenarians with LVADs
- Author
-
Murray Kwon, M. Kamath, R. Meguerdijian, Amit Iyengar, A. Salimbangon, A. Chang, Eugene C. DePasquale, Mario C. Deng, D. Vucicevic, M. Moore, and S. Shah
- Subjects
Pulmonary and Respiratory Medicine ,Heart transplantation ,Transplantation ,medicine.medical_specialty ,Bridging (networking) ,business.industry ,medicine.medical_treatment ,Internal medicine ,medicine ,Cardiology ,Surgery ,Cardiology and Cardiovascular Medicine ,business - Published
- 2018
- Full Text
- View/download PDF
46. Contribution of Individual Genes to Longitudinal Variation of Gene Expression Profile Scores
- Author
-
Mario C. Deng, D. Hiller, Martin Cadeiras, Eugene C. DePasquale, Marisa G. Crespo-Leiro, and Robert Woodward
- Subjects
Pulmonary and Respiratory Medicine ,Genetics ,Transplantation ,Variation (linguistics) ,business.industry ,Gene expression ,Medicine ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,Gene - Published
- 2018
- Full Text
- View/download PDF
47. By Molecular Analysis, Many ISHLT Histologic Rejection Diagnoses Are Associated With Molecular Injury, Not Molecular Rejection
- Author
-
Alexandre Loupy, Patrick Bruneval, Peter S. Macdonald, Jeff Reeve, J. Goekler, Jon A. Kobashigawa, Mario C. Deng, Marisa G. Crespo-Leiro, Eugene C. DePasquale, P. F. Halloran, Andreas Zuckermann, Arezu Aliabadi, Martin Cadeiras, Luciano Potena, and Daniel Kim
- Subjects
Pulmonary and Respiratory Medicine ,Transplantation ,Pathology ,medicine.medical_specialty ,business.industry ,medicine ,Surgery ,Medical diagnosis ,Cardiology and Cardiovascular Medicine ,business ,Molecular analysis - Published
- 2018
- Full Text
- View/download PDF
48. Impaired Kidney Function and Impact on Survival After Left Ventricular Assist Device Implantation as a Bridge to Transplantation
- Author
-
E. Moreno, Amit Iyengar, Abbas Ardehali, D. Vucicevic, A. Chang, Mario C. Deng, M. Kamath, A. Salimbangon, Martin Cadeiras, Eugene C. DePasquale, and S. Shah
- Subjects
Pulmonary and Respiratory Medicine ,Transplantation ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Renal function ,Internal medicine ,Ventricular assist device ,medicine ,Cardiology ,Surgery ,Bridge to transplantation ,Cardiology and Cardiovascular Medicine ,business - Published
- 2018
- Full Text
- View/download PDF
49. Association between Multidimensional Molecular Biomarkers and Functional Recovery Potential in Advanced Heart Failure
- Author
-
J. Do, D. Chu, Peipei Ping, T. Bao, E. Oh, C. Kahn, Martin Cadeiras, Mario C. Deng, E. Chang, Murray Kwon, A. Le, David Elashoff, L. Masukawa, C. Lumintang, Joanna Schaenman, S. Kupiec-Weglinski, Maura Rossetti, R. Dod, Elaine F. Reed, Ryan Togashi, J. Hai, V. Groysberg, Joseph S. Meltzer, Tristan Grogan, and Galyna Bondar
- Subjects
Pulmonary and Respiratory Medicine ,Transplantation ,business.industry ,Association (object-oriented programming) ,Heart failure ,Medicine ,Surgery ,Cardiology and Cardiovascular Medicine ,Bioinformatics ,business ,medicine.disease ,Functional recovery ,Molecular biomarkers - Published
- 2018
- Full Text
- View/download PDF
50. The Comparison of Survival in Patients with Redo Heart Transplantation by Era
- Author
-
D. Vucicevic, Mario C. Deng, Amit Iyengar, Abbas Ardehali, Martin Cadeiras, E. Moreno, S. Shah, M. Kamath, Eugene C. DePasquale, A. Salimbangon, and A. Chang
- Subjects
Pulmonary and Respiratory Medicine ,Heart transplantation ,Transplantation ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,medicine ,Surgery ,In patient ,Cardiology and Cardiovascular Medicine ,business - Published
- 2018
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.