182 results on '"Luo, Fang"'
Search Results
2. Identification and experimental validation of mitochondria-related genes biomarkers associated with immune infiltration for sepsis
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Qi Shu, Han She, Xi Chen, Like Zhong, Junfeng Zhu, and Luo Fang
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Immunology ,Immunology and Allergy - Abstract
BackgroundSepsis remains a complex condition with incomplete understanding of its pathogenesis. Further research is needed to identify prognostic factors, risk stratification tools, and effective diagnostic and therapeutic targets.MethodsThree GEO datasets (GSE54514, GSE65682, and GSE95233) were used to explore the potential role of mitochondria-related genes (MiRGs) in sepsis. WGCNA and two machine learning algorithms (RF and LASSO) were used to identify the feature of MiRGs. Consensus clustering was subsequently carried out to determine the molecular subtypes for sepsis. CIBERSORT algorithm was conducted to assess the immune cell infiltration of samples. A nomogram was also established to evaluate the diagnostic ability of feature biomarkers via “rms” package. ResultsThree different expressed MiRGs (DE-MiRGs) were identified as sepsis biomarkers. A significant difference in the immune microenvironment landscape was observed between healthy controls and sepsis patients. Among the DE-MiRGs, NDUFB3 was selected to be a potential therapeutic target and its significant elevated expression level was confirmed in sepsis using in vitro experiments and confocal microscopy, indicating its significant contribution to the mitochondrial quality imbalance in the LPS-simulated sepsis model. ConclusionBy digging the role of these pivotal genes in immune cell infiltration, we gained a better understanding of the molecular immune mechanism in sepsis and identified potential intervention and treatment strategies.
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- 2023
3. Population Pharmacokinetics of Anlotinib, a Multiple Receptor Tyrosine Kinase Inhibitor, in Chinese Patients With Malignant Tumors
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Gaoqi Xu, Dihong Yang, Qi Shu, Junfeng Zhu, Haiying Ding, Wenxiu Xin, Like Zhong, Liqin Zhu, and Luo Fang
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Pharmacology ,Pharmacology (medical) - Published
- 2023
4. Supplementary Figure and Tables from Cell-Cycle and DNA-Damage Response Pathway Is Involved in Leptomeningeal Metastasis of Non–Small Cell Lung Cancer
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Min Hu, Weimin Mao, Hongyang Lu, Lei Gong, Zhiyu Huang, Luo Fang, Xin Ye, Jingyan Ding, Haiyan Xu, Mengzhao Wang, Yanjun Xu, Xuesong Lu, Yan Xu, Xuehua Zhu, and Yun Fan
- Abstract
Supple Fig 1, Supple Table 1-8, and Supple Ref. Supplementary Figure S1. 2100 Bioanalyzer spectra of total DNA extracted from CSF samples. Supplementary Table S1. Sample collection information. Supplementary Table S2. Genes/regions included in the LungPlasma panel. Supplementary Table S3. Genes included in the customized SeqCap EZ Choice Library. Supplementary Table S4. List of hotspot mutations and structural rearrangements. Supplementary Table S5. Co-existence of EGFR and PIK3CA mutations as reported in NSCLC patient datasets Supplementary Table S6. Occurrence of somatic protein-changing variants in primary tumor and CSF. Supplementary Table S7. Genes and biological pathways with recurrent somatic protein-changing variants in primary tumor or CSF. Supplementary Table S8. Comparison of EGFR mutation type(s) in CSF cfDNA and pellet DNA as detected by droplet digital PCR (ddPCR).
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- 2023
5. Data from Cell-Cycle and DNA-Damage Response Pathway Is Involved in Leptomeningeal Metastasis of Non–Small Cell Lung Cancer
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Min Hu, Weimin Mao, Hongyang Lu, Lei Gong, Zhiyu Huang, Luo Fang, Xin Ye, Jingyan Ding, Haiyan Xu, Mengzhao Wang, Yanjun Xu, Xuesong Lu, Yan Xu, Xuehua Zhu, and Yun Fan
- Abstract
Purpose: Leptomeningeal metastasis (LM) is a detrimental complication of non–small cell lung cancer (NSCLC) and associated with poor prognosis. However, the underlying mechanisms of the metastasis process are still poorly understood.Experimental Design: We performed next-generation panel sequencing of primary tumor tissue, cerebrospinal fluid (CSF), and matched normal controls from epidermal growth factor receptor (EGFR) mutation-positive NSCLC patients with LM.Results: The status of EGFR-activating mutations was highly concordant between primary tumor and CSF. PIK3CA aberrations were high in these patients, implicating an association with LM risk. Intriguingly, low overlapping of somatic protein-changing variants was observed between paired CSF and primary lesions, exhibiting tumor heterogeneity and genetic divergence. Moreover, genes with CSF-recurrent genomic alterations were predominantly involved in cell-cycle regulation and DNA-damage response (DDR), suggesting a role of the pathway in LM development.Conclusions: Our study has shed light on the genomic variations of NSCLC-LM, demonstrated genetic heterogeneity and divergence, uncovered involvement of cell-cycle and DDR pathway, and paved the way for potential therapeutic approaches to this unmet medical need. Clin Cancer Res; 24(1); 209–16. ©2017 AACR.
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- 2023
6. Signal differentiation models for multiple microRNA detection: a critical review
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Yue Sun, Yinan Wang, Luo Fang, and Tailin Xu
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Biochemistry ,Analytical Chemistry - Published
- 2023
7. Synthesis of magnesium-based microparticles using oil cake of plukenetia volubilis (Inca fruit) seeds and study of its radical scavenging activity
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Badrinathan Sridharan, Jiann-Yeu Chen, Siti Raudhatul Kamali, Chang–Nan Chen, Ting-Xuan Liu, Qing Luo-Fang, Yi-Jyun Kung, and Meng-Jen Lee
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General Medicine - Published
- 2022
8. Additional file 1 of Pre-incisional infiltration with ropivacaine plus dexamethasone palmitate emulsion for postoperative pain in patients undergoing craniotomy: study protocol for a prospective, randomized controlled trial
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Zhang, Wei, Li, Chunzhao, Zhao, Chunmei, Ji, Nan, and Luo, Fang
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Additional file 1. SPIRIT checklist.
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- 2023
- Full Text
- View/download PDF
9. Supplemental Material - Confidence Screening Detector: A New Method for Detecting Test Collusion
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Xu, Yongze, Cui, Ying, Wang, Xinyi, Huang, Meiwei, and Luo, Fang
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FOS: Psychology ,160807 Sociological Methodology and Research Methods ,170199 Psychology not elsewhere classified ,FOS: Sociology - Abstract
Supplementary Material for Confidence Screening Detector: A New Method for Detecting Test Collusion by Yongze Xu, Ying Cui, Xinyi Wang, and Fang Luo in Applied Psychological Measurement.
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- 2023
- Full Text
- View/download PDF
10. Methadone switching for refractory cancer pain
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Haiying, Ding, Yu, Song, Wenxiu, Xin, Jiao, Sun, Like, Zhong, Qinfei, Zhou, Chaoneng, He, Liyan, Gong, and Luo, Fang
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Analgesics, Opioid ,Neoplasms ,Breakthrough Pain ,Humans ,Cancer Pain ,General Medicine ,Methadone ,Retrospective Studies - Abstract
Background Methadone is commonly considered an alternative opioid treatment for refractory cancer pain. This study aims to investigate the efficacy, safety, and cost of methadone in the treatment of refractory cancer pain. Methods A retrospective study was conducted in patients who used methadone for refractory cancer pain from April 2016 to December 2020 at a cancer specialized hospital. Pain control, evaluated via pain score and breakthrough pain frequency, and adverse events of methadone were compared with analgesic regimens prior to methadone administration. The factors potentially affecting the switching outcome were analyzed via multivariate analysis. Moreover, the cost of pain control was estimated. Results Ninety patients received methadone for poor pain control (74.4%), intolerable adverse events (10.0%), or both (15.6%) after prior opioid treatments. Sixty-four patients (71.1%) were successfully switched to methadone with median pain score significantly decreased from 4.0 to 2.0 (p Conclusion Methadone is an effective, safe, and cost-saving treatment for patients with refractory cancer pain.
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- 2022
11. Prevalence and predictors of medication non-adherence in children with inflammatory bowel disease in China: A cross-sectional study
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Yuanyuan Wu, Lingfei Huang, Jin Sun, Huijuan Wang, Luo Fang, and Jing Miao
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Pharmacology ,Pharmacology (medical) - Abstract
Background: Non-adherence to physician-prescribed medications, especially oral medications, is common in children with inflammatory bowel disease (IBD), and medication non-adherence is associated with poorer outcomes in IBD. Therefore, understanding and improving medication adherence in children with IBD is critical for optimizing treatment and improving treatment outcomes. Despite the relatively high prevalence of IBD in children in China, to date, very little is known about medication adherence in these patients.Objective: The aim of this study was to investigate the prevalence of medication non-adherence and its risk factors in children with IBD in China to provide a basis for developing adherence improvement strategies.Methods: A cross-sectional design was employed. Children (aged Results: A total of 119children were included in this study. The results showed that 33 (27.73%) and 86 (72.27%) children had poor and good medication adherence, respectively. Of these, 83 (69.75%) had forgotten to take their medications sometimes, often, or always. On binary logistic regression, we found that the incidence of medication non-adherence in children with IBD course of 3 years and above [OR 4.82 (95%CI: 1.47-15.88); p = 0.01] was significantly higher than that in children with course of 3 months to 1 year, whereas children with higher parental CCKNOW scores [OR 0.77 (95%CI: 0.67-0.88); p = 0.00] had significantly lower incidence of medication non-adherence than those with lower parental CCKNOW scores, and the results of the correlation between parental knowledge scores of the four categories and children’s medication adherence showed that drug knowledge scores (r = 0.36, p < 0.00) and complication knowledge scores (r = 0.24, p = 0.01) were positively correlated with medication adherence.Conclusion: Poor medication adherence in children with IBD in China was common, and forgetting to take medication was the main barrier. Longer disease duration (3 years and above) in children could act as a risk factor for medication adherence, whereas higher level of parental knowledge about IBD could act as a protective factor, and one interesting novel finding was that the level of parental knowledge about drug and complication were significantly correlated with medication adherence in children with IBD. Our results may inform on the design and implementation of medication adherence interventions for children with IBD.
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- 2022
12. Underlying mechanism of sorafenib resistance in hepatocellular carcinoma: a bioinformatics study based on validated resistance-related genes
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Luo Fang, Yu Song, Wenxiu Xin, Yan Hu, Yinghui Tong, Miaolian Wu, Haiying Ding, Gaoqi Xu, Liwen Zhang, and Peng Gao
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Sorafenib ,biology ,business.industry ,medicine.medical_treatment ,Cell ,Gastroenterology ,Computational biology ,Targeted therapy ,medicine.anatomical_structure ,Oncology ,biology.protein ,medicine ,PTEN ,Original Article ,KEGG ,DNA microarray ,business ,Gene ,Function (biology) ,medicine.drug - Abstract
Background Sorafenib, the first approved targeted therapy for advanced hepatocellular carcinoma (HCC), is often reported to comprised survival-benefit due to resistance. An underlying mechanism of resistance was proposed using bioinformatics analysis based on differentially expressed genes (DEGs) from microarrays. However, most DEGs were invalidated at both the expression level, and the role in causing resistance. Therefore, we conducted a bioinformatics analysis based on experimentally determined sorafenib-resistance-related genes (SRRGs) to elucidate the mechanism of sorafenib resistance. Methods The SRRGs, which have been experimentally determined to promote or inhibit resistance, were collected from published studies. The Database for Annotation, Visualization and Integrated Discovery (DAVID) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were used to perform Gene Ontology (GO) and pathway enrichment analysis, respectively. A corresponding protein-protein interaction network (PPI) was created using the Cytoscape software program, and network hub genes were proposed. Results A total of 145 SRRGs, with 117 promoting and 28 inhibiting resistance, were identified. Cell proliferation, migration, development, response to oxygen levels, epithelial-to-mesenchymal transition (EMT), cell skeleton, protein function, and autophagy were all proposed as crucial gene functions related to resistance. The pathways related to cell proliferation or apoptosis, immune function, endocrine metabolism, stem cell function, and differentiation were identified as key resistance-related pathways. A total of 81 hub genes were proposed, including the following top 10 genes: TP53, AKT1, EGFR, STAT3, VEGFA, JUN, MAPK1, IL6, PTEN, and CTNNB1. Conclusions In conclusion, this study gathered experimentally validated genes that determine sorafenib resistance in HCC, provided an overview of the underlying mechanisms of resistance, and further validated sorafenib resistance in HCC.
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- 2021
13. The impact of ibuprofen on valproic acid plasma concentration in pediatric patients
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Peng Gao, Junyan Wang, Liwen Zhang, Huijuan Wang, Yan Hu, Yinghua Ni, Lingfei Huang, Zhengyi Zhu, and Luo Fang
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Pharmacology ,Epilepsy ,Asian People ,Health, Toxicology and Mutagenesis ,Valproic Acid ,Humans ,Anticonvulsants ,Ibuprofen ,General Medicine ,Toxicology ,Child ,Biochemistry ,Retrospective Studies - Abstract
The combination of valproic acid (VPA) and ibuprofen are common in children with epilepsy. Three case reports investigated that ibuprofen might decrease the plasma concentration of VPA, however, no cohort study was published to evaluate the interaction of ibuprofen on VPA plasma concentration in pediatric patients.Data from patients with measured VPA trough concentrations (C
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- 2022
14. Machine learning-based metabolism-related genes signature and immune infiltration landscape in diabetic nephropathy
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Huangjie Zhang, Jinguo Hu, Junfeng Zhu, Qinglin Li, and Luo Fang
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Machine Learning ,Gene Ontology ,Databases, Factual ,Endocrinology, Diabetes and Metabolism ,Diabetes Mellitus ,Humans ,Diabetic Nephropathies ,RNA Polymerase II ,Algorithms - Abstract
BackgroundTo identify the diagnostic biomarkers of metabolism-related genes (MRGs), and investigate the association of the MRGs and immune infiltration landscape in diabetic nephropathy (DN).MethodsThe transcriptome matrix was downloaded from the GEO database. R package “limma” was utilized to identify the differential expressed MRGs (DE-MRGs) of HC and DN samples. Genetic Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of DE-MRGs were performed using “clusterProfiler” R package. WGCNA, LASSO, SVM-RFE, and RFE algorithms were employed to select the diagnostic feature biomarkers for DN. The ROC curve was used to evaluate discriminatory ability for diagnostic feature biomarkers. CIBERSORT algorithm was performed to investigate the fraction of the 22-types immune cells in HC and DN group. The correlation of diagnostic feature biomarkers and immune cells were performed via Spearman-rank correlation algorithm.ResultsA total of 449 DE-MRGs were identified in this study. GO and KEGG pathway enrichment analysis indicated that the DE-MRGs were mainly enriched in small molecules catabolic process, purine metabolism, and carbon metabolism. ADI1, PTGS2, DGKH, and POLR2B were identified as diagnostic feature biomarkers for DN via WGCNA, LASSO, SVM-RFE, and RFE algorithms. The result of CIBERSORT algorithm illustrated a remarkable difference of immune cells in HC and DN group, and the diagnostic feature biomarkers were closely associated with immune cells.ConclusionADI1, PTGS2, DGKH, and POLR2B were identified as diagnostic feature biomarkers for DN, and associated with the immune infiltration landscape, providing a novel perspective for the future research and clinical management for DN.
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- 2022
15. Effectiveness and safety of extended thromboprophylaxis in post-discharge patients with COVID-19: A systematic review and meta-analysis
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Meng-Fei Dai, Wen-Xiu Xin, Sisi Kong, Hai-Ying Ding, and Luo Fang
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Hematology - Abstract
The effect of extended thromboprophylaxis in improving the prognosis of adult patients with coronavirus disease 2019 (COVID-19) after discharge remains debatable. This meta-analysis was aimed to determine the advantages and disadvantages of extended thromboprophylaxis in these patients.Different databases such as PubMed, Embase, Web of Science, and Cochrane Library were systematically searched for studies that evaluated the effects of extended thromboprophylaxis in post-discharge patients with COVID-19 until 13 June 2022. The primary efficacy outcome was defined by the composite outcome of thromboembolism and all-cause mortality, and the safety outcome was defined by bleeding events. The odds ratios (ORs) and 95 % confidence intervals (CIs) of efficacy and safety outcomes were calculated using fixed- or random-effects model. Interaction analysis was performed to assess and compare observational studies and randomised controlled trials (RCTs). A sensitivity analysis was performed after excluding studies of poor quality.Eight studies involving 10,148 patients were included. The results confirmed that extended thromboprophylaxis, primarily prophylactic use of anticoagulants for35 days, was significantly associated with reduced composite outcome in high-risk post-discharge patients with COVID-19 (OR: 0.52; 95 % CI: 0.41-0.67, P = 0.000). Interaction analysis revealed that the effect estimates were consistent between the RCT and observational studies (PIn post-discharge patients with COVID-19 at high risk of thromboembolism, extended thromboprophylaxis, primarily prophylactic use of anticoagulants for35 days, can significantly reduce the risk of thrombosis and all-cause mortality without increasing the risk of major bleeding events.PROSPERO CRD42022339399.
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- 2022
16. Impact of individualized pharmaceutical care on efficacy and safety of opioid-tolerant outpatients with cancer pain: a multicenter randomized controlled trial
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Haiying Ding, Yu Song, Nan Wu, Xiaowei Zheng, Qing Wei, Yancai Sun, Ruixiang Xie, Qing Zhai, Silu Xu, Yajun Qi, Yinghong Wang, Hui Li, Lin Yang, Qing Fan, Qiuling Zhao, Juan Chen, Jing Shi, Cunxian Duan, Qiong Du, Yiwen Zhang, Zhengbo Song, Shuang Fu, Yunfang Cai, Xianhong Huang, Luo Fang, Yuguo Liu, and Ping Huang
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General Medicine - Abstract
Managing cancer pain is a growing challenge. Individualized pharmaceutical care is particularly important for opioid-tolerant outpatients due to variation in terms of their knowledge about pain, treatment adherence, and risk of experiencing inadequate analgesia and severe adverse events. This study aimed to determine the influence of individualized pharmaceutical care on outcomes in opioid-tolerant outpatients with cancer pain.A multicenter, open-label, randomized, controlled study was carried out. Opioid-tolerant outpatients experiencing chronic cancer pain and receiving sustained-release opioids were randomly assigned to the intervention group and the control group with a 1:1 ratio. The intervention group received individualized pharmaceutical care, while the control group received conventional care during 4-week period. The primary endpoint was medication adherence on the intention-to-treat (ITT) population. Secondary outcomes included the patients' knowledge of cancer pain and pain medications, pain score, frequency of breakthrough pain, quality of life (QoL) which were assessed on the ITT population. Adverse events were evaluated according to the National Cancer Institute (NCI) Common Terminology Criteria for Adverse Event (CTCAE) version 4.0 on the per-protocol (PP) population.A total of 118 patients were enrolled, and 102 patients (51 in each group) completed the 30-day follow-up from six oncology centers in China. The proportion of patients adhering to opioid medication increased to similar levels in the two groups during the 4 weeks (P=0.149). The intervention group had a significantly lower pain score at 4 weeks compared to the control group (P=0.015), and the proportion of participants without breakthrough pain was significantly higher at 4 weeks than at baseline in the intervention group (P=0.029), but not in the control group (P=0.322). The two groups did not differ significantly in terms of QoL or adverse events.Our results suggest that individualized pharmaceutical care can markedly reduce patient-related problems and significantly improve pain control in opioid-tolerant outpatients. These findings validate the recommendations to include clinical pharmacists in the management of cancer pain.ClinicalTrials.gov identifier: NCT03439904.
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- 2022
17. Spectrum-Effect Relationship-Based Strategy Combined with Molecular Docking to Explore Bioactive Flavonoids from
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Junfeng, Zhu, Haiying, Ding, Like, Zhong, Wenxiu, Xin, Xiaojiao, Yi, and Luo, Fang
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Flavonoids ,Lipopolysaccharides ,Molecular Docking Simulation ,Tracheophyta ,Interleukin-6 ,Plant Extracts ,Tandem Mass Spectrometry ,Phytochemicals ,Anti-Inflammatory Agents ,Antioxidants ,Chromatography, High Pressure Liquid - Published
- 2022
18. Functional Limitations Associated with Frailty Risk in Older Adults Increased after COVID-19 Infection in 2020 CDC NHIS Data
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Kume June, Jumbo Adiebonye, Voltmer Christopher, and Luo Fang
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- 2022
19. Cost-effectiveness of PARP inhibitors in malignancies: A systematic review
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Haiying Ding, Chaoneng He, Yinghui Tong, Qilu Fang, Xiufang Mi, Lingya Chen, Wenxiu Xin, and Luo Fang
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Male ,Ovarian Neoplasms ,Multidisciplinary ,Cost-Benefit Analysis ,Humans ,Prostatic Neoplasms ,Female ,Antineoplastic Agents ,Poly(ADP-ribose) Polymerase Inhibitors - Abstract
Objectives Poly (ADP-ribose) polymerase inhibitor (PARPi) have become a mainstay for the treatment of BRCA-mutant malignancies. PARPis are likely to be more effective but also bring an increase in costs. Thus, we aimed at evaluating the cost effectiveness of PARPis in the treatment of malignancies. Methods Studies of cost effectiveness of PARPis were searched from PubMed, Web of Science, and Cochrane Library. Key information was extracted from the identified studies and reviewed. Quality of the included studies was evaluated using Quality of Health Economic Studies (QHES) instrument. Modeling techniques, measurement of parameters and uncertainty analysis were analyzed across studies. Interventions and cost-effectiveness results were reported stratified by patient population. Results Among the 25 studies identified, we included 17 on ovarian cancer, 2 on breast cancer, 3 on pancreatic cancer, and 3 on prostate cancer that involved olaparib, niraparib, rucaparib, and talazoparib. All studies had a QHES score of above 75. In the maintenance therapy of ovarian cancer, additional administration of olaparib was cost-effective for newly diagnosed patients after first-line platinum-based chemotherapy but was not cost-effective for platinum-sensitive recurrent patients in majority studies. However, the economic value of other PARPis in ovarian cancer as well as all PARPis in other tumors remained controversial. Cost-effectiveness of PARPi was primarily impacted by the costs of PARPi, survival time, health utility and discount rate. Moreover, genetic testing improved the cost-effectiveness of PARPi treatment. Conclusions PARPi is potentially cost-effective for patients with ovarian, pancreatic, or prostate cancer. Genetic testing can improve the cost-effectiveness of PARPi.
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- 2022
20. Expert consensus statement on therapeutic drug monitoring and individualization of linezolid
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Bin Lin, Yangmin Hu, Ping Xu, Tao Xu, Chunyan Chen, Le He, Mi Zhou, Zhangzhang Chen, Chunhong Zhang, Xuben Yu, Luo Fang, Junfeng Zhu, Yanlan Ji, Qun Lin, Hengbin Cao, Youqin Dai, Xiaoyan Lu, Changcheng Shi, Li Li, Changjiang Wang, Xumei Li, Qiongyan Fang, Jing Miao, Zhengyi Zhu, Guangyong Lin, Haichao Zhan, Shiwen Lv, Yalan Zhu, Xinjun Cai, Yin Ying, Meng Chen, Qiong Xu, Yiwen Zhang, Yubin Xu, Pea Federico, Saiping Jiang, and Haibin Dai
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Public Health, Environmental and Occupational Health ,Linezolid ,Humans ,Drug Monitoring ,Oxazolidinones ,Anti-Bacterial Agents - Abstract
Linezolid is an oxazolidinone antibacterial drug, and its therapeutic drug monitoring and individualized treatment have been challenged since its approval. With the in-depth clinical research of linezolid, we have changed our attitude toward its therapeutic drug monitoring and our view of individualized treatment. On the basis of summarizing the existing clinical studies, and based on the practical experience of each expert in their respective professional fields, we have formed this expert consensus. Our team of specialists is a multidisciplinary team that includes pharmacotherapists, clinical pharmacology specialists, critical care medicine specialists, respiratory specialists, infectious disease specialists, emergency medicine specialists and more. We are committed to the safe and effective use of linezolid in patients in need, and the promotion of its therapeutic drug monitoring.
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- 2022
21. Analysis on the Issue of 'Asia-Africa Growth Corridor'
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Luo Fang
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- 2021
22. In Response to Comments on 'Long-term Follow-up of Pulsed Radiofrequency Treatment for Trigeminal Neuralgia: Kaplan-Meier Analysis in a Consecutive Series of 149 Patients'
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Luo, Fang and Zipu, Jia
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Treatment Outcome ,Humans ,Kaplan-Meier Estimate ,Trigeminal Neuralgia ,Follow-Up Studies ,Pulsed Radiofrequency Treatment - Published
- 2022
23. Population Pharmacokinetic Study of Vancomycin in Chinese Pediatric Patients with Hematological Malignancies
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Zhengyi Zhu, Liwen Zhang, Lingfei Huang, Luo Fang, Junyan Wang, Yinghua Ni, Peng Gao, Yan Hu, Huijuan Wang, and Jufei Yang
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Male ,0301 basic medicine ,China ,medicine.medical_specialty ,Adolescent ,medicine.drug_class ,Child Health Services ,030106 microbiology ,Antibiotics ,Population ,Renal function ,030204 cardiovascular system & hematology ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Asian People ,Pharmacokinetics ,Vancomycin ,Internal medicine ,medicine ,Humans ,Pharmacology (medical) ,Dosing ,Child ,Infusions, Intravenous ,education ,Gram-Positive Bacterial Infections ,Retrospective Studies ,Volume of distribution ,education.field_of_study ,medicine.diagnostic_test ,business.industry ,Infant ,Anti-Bacterial Agents ,Therapeutic drug monitoring ,Area Under Curve ,Child, Preschool ,Hematologic Neoplasms ,Female ,business ,Glomerular Filtration Rate ,medicine.drug - Abstract
Study objectives Vancomycin is a primary antibiotic for the treatment of severe infections in children with malignant hematological disease. However, precise dosing of vancomycin is difficult in children because of high interindividual variability and limited data of pharmacokinetic profiles. The present study aims to develop a population pharmacokinetic (PPK) model for vancomycin in Chinese pediatric patients with hematological malignancies. Design This was a retrospective pharmacokinetic study. Setting The setting for this study was a tertiary-care children's hospital. Patients This study included 92 pediatric patients with hematological malignancies who received vancomycin and experienced therapeutic drug monitoring from February 2017 to December 2018. Measurements and main results A PPK model was generated with a nonlinear mixed effects model. In addition, required doses to achieve target therapeutic concentrations were simulated based on the final model. A one-compartment model with first-order elimination fit the concentration data best. Actual body weight (BW) and glomerular filtration rate (GFR) were the significant influential factors on the clearance (CL) of vancomycin. The final PPK model for CL was CL (L/h) = 4.18 × GFR / 145 0.741 × BW / 25 K , K = BW - 0.856 / BW - 0.856 + 6 . 53 - 0.856 , and the volume of distribution was 22.3 L. The model proved to be robust and reliable. Reference dosing regimens were proposed based on the final model. Conclusions A PPK model of vancomycin was established for Chinese pediatric patients with hematological malignancies using a nonlinear mixed effects model, which provided a reference for the clinical application of vancomycin.
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- 2020
24. PEGylated versus non-PEGylated drugs: A cross-sectional analysis of adverse events in the FDA Adverse Event Reporting System (FAERS) Database
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Luo Fang, Cai Ji, Zhengyi Zhu, Yinghua Ni, Yan Hu, Lingfei Huang, Jufei Yang, Peng Gao, Huijuan Wang, and Junyan Wang
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Drug ,050101 languages & linguistics ,Asparaginase ,Databases, Factual ,media_common.quotation_subject ,MedDRA ,02 engineering and technology ,computer.software_genre ,Polyethylene Glycols ,Liver disorder ,Pharmacovigilance ,chemistry.chemical_compound ,Adverse Event Reporting System ,0202 electrical engineering, electronic engineering, information engineering ,Adverse Drug Reaction Reporting Systems ,Humans ,Medicine ,0501 psychology and cognitive sciences ,Pharmacology (medical) ,Adverse effect ,media_common ,Pharmacology ,Database ,United States Food and Drug Administration ,business.industry ,05 social sciences ,United States ,Cross-Sectional Studies ,chemistry ,PEGylation ,020201 artificial intelligence & image processing ,business ,computer - Abstract
Objective PEGylation is commonly used to optimize pharmacological properties and improve the clinical response of drugs. Due to the inherent toxicity of polyethylene glycol (PEG) and pharmacological changes induced by PEGylation, the safety may be altered and required to be explored. This study explored the adverse events (AEs) associated with PEGylation by comparing pharmacovigilance data of PEGylated and parent drugs. Materials and methods We conducted a disproportionality analysis of spontaneous reports associated with PEGylated and corresponding parent medications from the FDA Adverse Event Reporting System database recorded between the 1st quarter of 2004 and the 4th quarter of 2018 at the level of preferred terms (PTs) and standard MedDRA queries (SMQs), respectively. The AEs probably different in risk due to changed pharmacological effects and inherent toxicity of PEG were analyzed. Results A total of 259,428 cases associated to six drug pairs (filgrastim, asparaginase, interferon α-2a, interferon α-2b,interferon β-1a, and liposomal doxorubicin) were collected. Although 95% of PTs were comparable between the two groups, PTs of deep vein thrombosis, pancreatitis acute, diabetes mellitus, liver disorder, disorientation, aphasia and infection, and SMQ of embolic and thrombotic events were significantly alleviated by PEGylation. No PT was significantly enhanced by PEGylation. Conclusion The pharmacovigilance profiles of PEGylated and non-PEGylated agents were similar. Further clinical assessment is required to validate the pharmacovigilance data.
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- 2020
25. Three-dimensional Cu-Ni composite superamphiphobic surface via electrodeposition and fluorosilane modification
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Fei Shen, Yanzong Zhang, Gang Yang, Meng-fan Luo, Lilin Wang, Xiaohong Zhang, Luo Fang, Shihuai Deng, Weiyi Liu, and Yan Liu
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Diffraction ,Materials science ,Scanning electron microscope ,Composite number ,Analytical chemistry ,Infrared spectroscopy ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Surface energy ,0104 chemical sciences ,Contact angle ,Chemical stability ,Physical and Theoretical Chemistry ,0210 nano-technology ,Spectroscopy - Abstract
A superamphiphobic (SAP) surface was fabricated by electrodepositing Cu-Ni micro-nano particles on aluminum substrate and modifying via 1H, 1H, 2H, 2H-perfluorodecyltrimethoxysilane. Scanning electron microscopy, X-ray diffraction, energy-dispersive X-ray spectroscopy, and Fourier-transform infrared spectroscopy were employed to investigate the morphology and chemical composition. The results showed that the SAP surface had three-dimensional micro-nano structures and exhibited a maximum water contact angle of 160.0 \begin{document}$ ^{\circ} $\end{document} , oil contact angle of 151.6 \begin{document}$ ^{\circ} $\end{document} , a minimum water slide angle of 0 \begin{document}$ ^{\circ} $\end{document} and oil slide angle of 9 \begin{document}$ ^{\circ} $\end{document} . The mechanical strength and chemical stability of the SAP surface were tested further. The experimental results showed that the SAP surface presented excellent resistance to wear, prominent acid-resistance and alkali-resistance, self-cleaning and anti-fouling properties.
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- 2020
26. A Novel Risk Model Based on Autophagy-Related LncRNAs Predicts Prognosis and Indicates Immune Infiltration Landscape of Patients With Cutaneous Melanoma
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Qi Shu, Yi Zhou, Zhengjie Zhu, Xi Chen, Qilu Fang, Like Zhong, Zhuo Chen, and Luo Fang
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Genetics ,Molecular Medicine ,Genetics (clinical) - Abstract
Cutaneous melanoma (CM) is a malignant tumor with a high incidence rate and poor prognosis. Autophagy plays an essential role in the development of CM; however, the role of autophagy-related long noncoding RNAs (lncRNAs) in this process remains unknown. Human autophagy-related genes were extracted from the Human Autophagy Gene Database and screened for autophagy-related lncRNAs using Pearson correlation. Multivariate Cox regression analysis was implemented to identify ten autophagy-related lncRNAs associated with prognosis, and a risk model was constructed. The Kaplan–Meier survival curve showed that the survival probability of the high-risk group was lower than that of the low-risk group. A novel predictive model was constructed to investigate the independent prognostic value of the risk model. The nomogram results showed that the risk score was an independent prognostic signature that distinguished it from other clinical characteristics. The immune infiltration landscape of the low-risk and high-risk groups was further investigated. The low-risk groups displayed higher immune, stromal, and ESTIMATE scores and lower tumor purity. The CIBERSORT and single sample gene set enrichment analysis (ssGSEA) algorithms indicated a notable gap in immune cells between the low- and high-risk groups. Ten autophagy-related lncRNAs were significantly correlated with immune cells. Finally, Gene Set Enrichment Analysis (GSEA) and Gene Set Variation Analysis (GSVA) results demonstrated that autophagy-related lncRNA-mediated and immune-related signaling pathways are crucial factors in regulating CM. Altogether, these data suggest that constructing a risk model based on ten autophagy-related lncRNAs can accurately predict prognosis and indicate the tumor microenvironment of patients with CM. Thus, our study provides a new perspective for the future clinical treatment of CM.
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- 2022
27. Pharmacist-led standardization of total parenteral nutrition improves postoperative nutritional status in colorectal cancer patients
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Yinghui Tong, Jiao Sun, Wenxiu Xin, Lingya Chen, Sisi Kong, Xiufang Mi, Yan Feng, Wei Jin, Yanli Wu, Haiying Ding, and Luo Fang
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Original Article ,General Medicine - Abstract
BACKGROUND: Total parenteral nutrition (TPN) is an essential treatment for patients who undergo abdominal surgery. Due to the gap of knowledge background between clinicians and pharmacists, the participation of the latter may improve TPN standardization. However, the impact on clinical outcome is unknown. In this study, we evaluated the impact of appropriacy and efficacy of TPN prescription, after a pharmacist-led TPN standardization program introduced. METHODS: A pharmacist-led TPN standardization program was introduced in the Zhejiang Cancer Hospital and the clinical outcomes were assessed. The TPN standardization program includes a pre-established standard multidisciplinary evaluation standard, a computerized TPN management system and regular evaluations of TPN prescription performed by pharmacists. Any concerns were identified and improved via discussed with doctors. To evaluate the effect of pharmacists’ intervention in nutritional status and postoperative complications, an observational before-and-after cohort study was performed. All patients admitted in hospital with colorectal cancer (CRC) and receiving abdominal surgery in June 2019 (pre-intervention cohort) and June 2020 (post-intervention cohort) were retrospectively analyzed. Nutritional status of patients was evaluated using the levels of postoperative serum albumin, prealbumin, total protein, and their decrease extent. Surgical or TPN-related complications and recovery time were collated as the clinical outcomes. RESULTS: There were no significant differences in the basic clinical information of the two cohorts, suggesting that the two groups are comparable. The average postoperative prealbumin levels were elevated in 2020 compared to 2019 (192.3±5.5 mg/L for 2019 and 229.5±4.8 mg/L for 2020, P
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- 2022
28. Additional file 1 of The patterns of co-occurrence variation are explained by the low dependence of bark beetles (Coleoptera: Scolytinae and Platypodinae) on hosts along altitude gradients
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Luo, Fang, Meng, Ling-Zeng, Wang, Jian, and Liu, Yan-Hong
- Abstract
Additional file 1. Table S1 showing the parameters of measured climatic variables of each FIT plot among three sample regions.
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- 2022
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29. 基于拉曼光谱法的电偏置悬空石墨烯器件热导率研究
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崔子孺 Cui Ziru, 周思宇 Zhou Siyu, 肖暘 Xiao Yang, 张宇辰 Zhang Yucheng, 郭楚才 Guo Chucai, 刘肯 Liu Ken, 罗芳 Luo Fang, and 朱梦剑 Zhu Mengjian
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Electrical and Electronic Engineering ,Atomic and Molecular Physics, and Optics ,Electronic, Optical and Magnetic Materials - Published
- 2023
30. A study of the phosphorylation proteomic skin characteristics of Tan sheep during the newborn and er-mao stages
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Chen, Yonghong, He, Dongqian, Li, Yachao, Luo, Fang, Zhang, Meng, Wang, Junkui, Chen, Liyao, and Tao, Jinzhong
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Proteomics ,inorganic chemicals ,Sheep ,integumentary system ,Er-mao stage fur ,Food Animals ,Animals ,Keratins ,bacteria ,Animal Science and Zoology ,Phosphorylation ,Tan sheep skin ,Regular Articles ,Skin - Abstract
In this experiment, in order to study the formation mechanism of the lamb fur of Tan sheep, skin samples were collected from Tan sheep at the newborn and er-mao stages. Then, the phosphorylated proteomes of the skin samples of Tan sheep at the two different stages were compared and analyzed using a TMT labeled quantitative phosphorylation proteomic technique. A total of 2806 phosphorylated proteins were identified, including 8184 phosphorylation sites. The results of this study’s quantitative analysis showed that when compared with the skin samples at the er-mao stage, the phosphorylation levels of 171 sites had been upregulated in the skin samples at newborn stage. Meanwhile, 125 sites had been downregulated at the same stage. As shown by the results of the functional enrichment analysis of the differentially phosphorylated proteins, they had been mainly enriched in the cysteine and methionine metabolism. In addition, the phosphorylation levels of KAP4.7 and KAP13.1 had also varied during the different skin stages. These results indicated that the cysteine metabolism pathways, as well as the phosphorylation modifications of the keratin associated proteins in the skin, played important roles in the formation of the er-mao stage fur of the Tan sheep. Therefore, the findings of this study provided a new angle for interpreting the formation mechanism of er-mao stage fur properties. Supplementary Information The online version contains supplementary material available at 10.1007/s11250-021-02899-6.
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- 2021
31. The genomic basis of host-switching illuminated by new genomic resources for the human blood fluke Shistosoma japonicum
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Luo, Fang, Wenbin Yang, Mingbo Yin, Xiaojin Mo, Yuhong Pang, Chengsong Sun, Bingkuan Zhu, Zhang, Wei, Yi, Cun, Zhidan Li, Jipeng Wang, Xu, Bin, Feng, Zheng, Yangyi Huang, Lu, Yan, and Hu, Wei
- Subjects
parasitic diseases - Abstract
Schistosoma japonicum, prevalent in East and Southeast Asia, is a zoonotic parasite that causes human schistosomiasis. The evolutionary history and local adaptation of S. japonicum are poorly known due to the lack of high-quality whole-genome data. We assembled a chromosome-level genome of S. japonicum and analyzed the genomes of 72 S. japonicum collected from six populations covering its entire endemic region. We studied a zoophilic lineage from Taiwan that was primarily separated from other zoonotic populations at ~45 Kya. This is consistent with the divergent history of their intermediate hosts. A severe population bottleneck was detected in S. japonicum during the Last Glacial Maximum, that coincided with demographic history of the modern humans in Asia. We identified several genomic regions likely underlying positive selection. For example, GATAD2A showed substantial differentiation between the zoophilic and zoonotic populations. RNAi knockdown suggested that it is associated with parasite development and infection establishment in definitive hosts. Another example was Lmln, a protein-coding gene associated with the specificity of the intermediate hosts, that showed divergent adaptation between mountain and lake areas. These findings provide a comprehensive set of population-genomic data and a genomic resource for further functional and medical studies.
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- 2021
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32. Advanced microfluidic technologies for isolating extracellular vesicles
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Shaohua Zhang, Jinqi Deng, Jianbin Li, Fei Tian, Chao Liu, Luo Fang, and Jiashu Sun
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Spectroscopy ,Analytical Chemistry - Published
- 2022
33. Long-term Follow-up of Pulsed Radiofrequency Treatment for Trigeminal Neuralgia: Kaplan-Meier Analysis in a Consecutive Series of 149 Patients
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Jia, Zipu, Ren, Hao, Zhao, Chunmei, Meng, Lan, Shen, Ying, and Luo, Fang
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Treatment Outcome ,Humans ,Kaplan-Meier Estimate ,Trigeminal Neuralgia ,Follow-Up Studies ,Pulsed Radiofrequency Treatment ,Retrospective Studies - Abstract
At present, there is no ideal method for the treatment of trigeminal neuralgia (TN). The need for an easy, safe, non- or micro-neurodestructive, repeatable treatment, with a fairly satisfactory rate of pain relief, is paramount. Pulsed radiofrequency (PRF) as a minimally invasive and microdestructive technique has been reported to be an option for TN; however, no study has reported the long-term outcome of TN in a large case series.We aimed to investigate the efficacy, safety, and the long-term outcomes of PRF treatment for patients with TN.This was a long-term, large case series, retrospective study.The study was conducted at Tiantan hospital,Beijing.We retrospectively analyzed medical databases and follow-up data of 149 patients with TN from January 2008 through March 2021, who underwent PRF treatment, with a median follow-up time of 71.0 months (interquartile range, 20.0 months to 112.0 months). Baseline characteristics and intraoperative data of patients were retrospectively extracted; data about complications and side effects were also collected. The follow-up data were composed of the postoperative Barrow Neurological Institute Pain Intensity Score pain intensity at a different time, the onset time of PRF treatment, and the time when pain was recurrent.The initial pain relief rate was 75.17% after the procedure. The cumulative recurrence-free survival after the procedure was 75.00% at one month; 72.87% at 6 months; 70.59% at 12 months; 65.39% at 24 months; 61.63% 48 months; 56.73% at 96 months; and 49.64% at 144 months. The median recurrence-free time was 118 months according to the Kaplan-Meier estimator. Nineteen patients had pain recurrence with a median time of 15 months (range, 1.0 months to 96.0 months), among whom, 12 underwent a second PRF procedure and 9 patients experienced satisfactory pain relief. No serious complications or side effects occurred after the procedure.This was a single-center, retrospective study. Our study failed to conduct a stratified analysis on the effect of PRF treatment for classic and idiopathic TN. The most efficacious parameters of PRF applied for TN and studies trying to identify positive predictive factors of pain relief before PRF treatment have yet to be investigated.The results of this study show the promising long-term effect of PRF on primary TN. The safety and repeatability might be more easily accepted by patients with TN and should be considered a preferred treatment option before choosing neurodestructive or more invasive methods.
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- 2021
34. Modified microvessel density based on perfusion distance: a preferable NSCLC prognostic factor
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Yinghui Tong, Dihong Yang, Xiufang Mi, Yu Song, Wenxiu Xin, Like Zhong, Zheng Shi, Gaoqi Xu, Haiying Ding, and Luo Fang
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Original Article ,General Medicine - Abstract
BACKGROUND: Despite the vital role of blood perfusion in tumor progression, the prognostic value of typical blood perfusion markers, such as microvessel density (MVD) or microvessel area (MVA), in patients with non-small cell lung cancer (NSCLC) is still unclear. This study established a modified MVD (mMVD) measurement based on perfusion distance and determined its prognostic value in patients with NSCLC. METHODS: A total of 100 patients with NSCLC were enrolled in this retrospective study. The intratumor microvessels of NSCLC patients were visualized using immunohistochemical staining for CD31. The blood perfusion distance was evaluated as the distance from each vessel to its nearest cancer cell (D(mvcc)), and the cutoff value for prognosis was determined. Apart from the total MVD (tMVD), microvessels near cancer cells within the cutoff-D(mvcc) were counted as mMVD. Predictive values for mortality and recurrence were evaluated and compared. RESULTS: The D(mvcc) ranged from 1.6 to 269.8 µm (median, 13.1 µm). The mMVD (range: 2–70; median 23) was counted from tMVD according to the cutoff-D(mvcc) (~20 µm). Compared with tMVD, a larger fraction of mMVD (80% vs. 2.9%) played a significant role in overall survival, with an improved area under the receiver operating characteristic (ROC) curve (AUC) (0.74 vs. 0.56). A high mMVD was an independent positive indicator of overall survival (OS) and progression-free survival (PFS). In contrast, tMVD was only related to PFS at the optimal cutoff. CONCLUSIONS: Perfusion-distance-based mMVD is a promising prognostic factor for NSCLC patients with superior sensitivity, specificity, and clinical applicability compared to tMVD. This study provides novel insights into the prognostic role of tumor vessel perfusion in patients with NSCLC.
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- 2021
35. Estimated Manipulation of Tablets and Capsules to Meet Dose Requirements for Chinese Children: A Cross-Sectional Study
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Luo Fang, Liwen Zhang, Panpan Pan, Chengtao Hong, and Yan Hu
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tablet ,prescription ,Drug doses ,medicine.medical_specialty ,Cross-sectional study ,business.industry ,capsule ,Pediatrics ,RJ1-570 ,pediatric ,manipulation ,Pediatrics, Perinatology and Child Health ,Emergency medicine ,drug dose ,medicine ,Medical prescription ,business ,Contraindication ,Original Research - Abstract
Objectives: To estimate the frequency of manipulations of all tablets and capsules prescribed for children in a teaching and tertiary children's hospital in China over the course of 1 month. Moreover, hypothetical reduction of manipulation according to the availability of low-strength tablets/capsules licensed by the Chinese National Medical Products Administration (CNMPA) was evaluated.Methods: Information on all tablets and capsules prescribed in the hospital from March 17 to April 16, 2019 was collected. It was assumed that tablets or capsules were manipulated if the prescribed dose would have required only a proportion of the intact dose form. Manipulation typically includes splitting or crushing tablets, opening capsules and dispersing in water, or combinations of these method. Moreover, we defined an “avoidable manipulation,” when the dose could be rounded and/or when alternative products with a reduced strength or in liquid formulation were available in the hospital, and a “inappropriate manipulation,” which involved manipulated medications with a direct contraindication for any manipulation, such as those with a narrow therapeutic index or hazardous ingredients, or modified release dosage-forms. The frequencies of total, avoidable, and inappropriate manipulation were estimated, along with the hypothetical reduction of manipulation according to the availability of CNMPA-approved drug doses.Results: A total of 17,123 prescriptions for 142 medications were identified to have required a manipulation among 78,366 prescriptions administered during the study period, with 43 different proportions of subdivisions, ranging from a 19/20 to 1/180 product strength reduction. Half, quarter, and trisection were the most common subdivisions administered. Overall, 19% of the manipulated prescriptions were determined to be avoidable, and 19% of the manipulations involved medications with a clear recommendation to not manipulate. In addition, 21% of the manipulated prescriptions could have been potentially avoided if all of the approved preparations with the lowest strength would have been available at the hospital. Any manipulations undertaken were carried out by pharmacists and family care givers.Conclusions: More than 20% of tablets and capsules prescriptions need manipulated, included a high incidence of avoidable and inappropriate manipulation.
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- 2021
36. Pharmacist-Led Management Improves Treatment Adherence and Quality of Life in Opioid-Tolerant Patients With Cancer Pain: A Randomized Controlled Trial
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Xiaowei Zheng, Haiying Ding, Silu Xu, Ruixiang Xie, Yuguo Liu, Qing Zhai, Luo Fang, Yinghui Tong, Jiao Sun, Wenxiu Xin, Nan Wu, Juan Chen, Wenna Shi, Ling Yang, Hui Li, Jingjing Shao, Yangkui Wang, Hui Yu, Bo Zhang, Qiong Du, Yezi Yang, Xiaodan Zhang, Cunxian Duan, Qiulin Zhao, Jing Shi, Jing Huang, Qing Fan, Huawei Cheng, Lingya Chen, Sisi Kong, Hui Zhang, Liyan Gong, Yiping Zhang, Zhengbo Song, Yang Yang, Shoubing Zhou, Chengsuo Huang, Jinyuan Lin, Chenchen Wang, Xianhong Huang, Qing Wei, Yancai Sun, and Ping Huang
- Subjects
Anesthesiology and Pain Medicine ,Neurology (clinical) - Abstract
Opioid-tolerant patients are more likely to deviate from recommended treatments and to experience inadequate analgesia than opioid-naive ones. The aim of this study was to examine whether pharmacist-led management could help improve treatment adherence and quality of life.Eligible patients were randomized in a 1:1 ratio to control group and intervention group. The control group received routine education and support, while the intervention group received additional individualized pharmacist-led care. The primary endpoint was treatment adherence in the per-protocol analysis, as evaluated by blinded assessors. An interim analysis was planned when 30% patients completed the study. Alpha was divided into the interim analysis (0.015) and the final analysis (0.035).In the interim analysis (97 and 87 patients in the control and intervention groups, respectively), the primary endpoint was met. Pharmacist-led intervention significantly increased treatment adherence (93.3 vs. 79.8%; OR: 2.25; 95% CI 1.02, 4.94; P = 0.013), quality of life (0.81 ± 0.17 vs. 0.72 ± 0.25; P = 0.008), and reporting of adverse events (82.7 vs. 61.9%; OR: 1.88; 95% CI 1.16, 3.07; P = 0.004). The two groups did not differ in pain control rate (66.7 vs. 57.1%; OR: 1.25; 95% CI 0.87, 1.78; P = 0.218), breakthrough pain-free rate (66.7 vs. 61.9%; OR: 1.12; 95% CI 0.78, 1.59; P = 0.532) and pain score (1.97 ± 1.04 vs. 2.15 ± 1.24; P = 0.522).Pharmacist-led management improved treatment adherence, quality of life, and the reporting of adverse events in opioid-tolerant patients with cancer pain.ClinicalTrials.gov, NCT03455023.
- Published
- 2021
37. A Cell Cycle-Related 13-mRNA Signature to Predict Prognosis in Hepatocellular Carcinoma
- Author
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Zhou, Yang, Lei, Dengliang, Hu, Gangli, and Luo, Fang
- Subjects
Cancer Research ,Oncology - Abstract
We aimed to propose a cell cycle-related multi/mRNA signature (CCS) for prognosis prediction and uncover new tumor-driver genes for hepatocellular carcinoma (HCC). Cell cycle-related gene sets and HCC samples with mRNA-Seq data were retrieved from public sources. The genes differentially expressed in HCCs relative to normal peritumoral tissues were extracted through statistical analysis. The CCS was constructed by Cox regression analyses. Predictive capacity and clinical practicality of the signature were evaluated and validated. The expression of the function-unknown genes in the CCS was determined by RT-qPCR. Candidate gene TICRR was selected for subsequent validation through functional experiments. A cell cycle-related 13-mRNA signature was generated from the exploratory cohort [The Cancer Genome Atlas (TCGA), n = 371)]. HCC cases were classified as high- vs. low-risk groups per overall survival (OS) [hazard ratio (HR) = 2.699]. Significantly, the CCS exhibited great predictive value for prognosis in three independent cohorts, particularly in GSE76427 cohort [area under the curve (AUC) = 0.835/0.822/0.808/0.821/0.826 at 1/2/3/4/5 years]. The nomogram constructed by integrating clinicopathological features with the CCS indicated high accuracy and practicability. Significant enrichment of tumorigenesis-associated pathways was observed in the high-risk patients by Gene Set Enrichment Analysis (GSEA). RT-qPCR revealed that TICRR was overexpressed in HCC samples. Increased TICRR expression implied poor prognosis in HCC patients. Furthermore, depletion of TICRR in HCC cells decreased cell proliferation and the G1/S transition. In conclusion, the established 13-CCS had efficacy in prognostic prediction of HCC patients. Additionally, TICRR was demonstrated as a tumor-driver gene for this deadly disease.
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- 2021
38. Tigecycline-Induced Tooth Discoloration in Children Younger than Eight Years
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Luo Fang, Yinghua Ni, Qi Yu, Jufei Yang, Ganggang Qi, Zhengyi Zhu, and Wenhua Ruan
- Subjects
Male ,Dentistry ,Tigecycline ,Clinical Therapeutics ,030226 pharmacology & pharmacy ,Tooth discoloration ,Mandibular second molar ,03 medical and health sciences ,0302 clinical medicine ,stomatognathic system ,Interquartile range ,Medicine ,Humans ,Pharmacology (medical) ,030212 general & internal medicine ,Adverse effect ,Child ,Permanent teeth ,Retrospective Studies ,Pharmacology ,business.industry ,Incidence (epidemiology) ,Small sample ,Anti-Bacterial Agents ,Incisor ,stomatognathic diseases ,Infectious Diseases ,Child, Preschool ,Tooth Discoloration ,Female ,business ,medicine.drug - Abstract
Tetracycline may cause tooth discoloration when used in young children during tooth development. Whether tigecycline, a tetracycline derivative, has either a similar adverse event or not remains unclear. We assessed the discoloration of the permanent teeth of patients
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- 2021
39. Partial Discharge Testing Platform for High Voltage Power Module Packaging Under Square Wave Excitation
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Luo Fang, Hongwu Peng, Yi Ding, Yalin Wang, Zhao Yuan, and Yi Yin
- Subjects
Generator (circuit theory) ,Materials science ,business.industry ,EMI ,Power electronics ,Power module ,Partial discharge ,Electrical engineering ,High voltage ,Square wave ,business ,Voltage - Abstract
Partial discharge (PD) issue of high voltage power module packaging insulation is increasingly critical due to the development of high voltage wide bandgap power modules towards high power density, which leads to smaller packages and higher operating voltages. However, existing standards for high voltage power modules focus on PD measurement under the sinusoidal waveform rather than actual DC or square waveform that poses actual electric stress on packaging insulation, and thus cannot fully represent the PD phenomenon in power electronics systems. To bridge this gap, this paper introduces a PD testing platform trimmed for high voltage power electronics systems, including a high-voltage (10 kV) square wave generator using supercascode structure with off-shelf SiC devices, and a contactless PD monitor using Super High Frequency (SHF) signatures from the PD event. The challenges in the design of this platform include the development of a PD-free high voltage square wave generator, and SHF PD signature separation from EMI noises induced by high dV/dt switching actions. Experiment validation is included in the last section of this paper.
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- 2021
40. MD2 blockage prevents the migration and invasion of hepatocellular carcinoma cells via inhibition of the EGFR signaling pathway
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Qilu Fang, Qi Shu, Haiying Ding, Luo Fang, Wenxiu Xin, Yan Hu, Qinglin Li, and Yajun Qi
- Subjects
Cell signaling ,biology ,business.industry ,Liver cell ,Cell ,Gastroenterology ,Cell migration ,Vimentin ,medicine.anatomical_structure ,Oncology ,Cancer research ,biology.protein ,Medicine ,Gene silencing ,Original Article ,Signal transduction ,business ,Protein kinase B - Abstract
Background The toll-like receptor (TLR) is an emerging signaling pathway in tumor invasion and metastasis. The activation of TLRs requires specific accessory proteins, such as the small secreted glycoprotein myeloid differentiation protein 2 (MD2), which contributes to ligand responsiveness. However, the role of MD2 in tumorigenesis and metastasis has rarely been reported. This study aimed to investigate the effects and underlying mechanisms of MD2 on the proliferation, migration, and invasion of hepatocellular carcinoma (HCC). Methods Cell counting kit 8 (CCK8), cell colony formation, wound healing, and transwell assays were conducted to determine cell viability, proliferation, migration, and invasion, respectively. Quantitative real-time PCR (qRT-PCR) was performed to assess the expression of MD2 in HCC cell lines and human normal liver cell lines as well as the silencing efficiency of MD2 blockage. Western blot and qRT-PCR assays were performed to detect the protein and mRNA expression levels of epithelial mesenchymal transformation (EMT) markers and epidermal growth factor receptor (EGFR) signaling molecules. Results MD2 was highly expressed in HCC tissues and cell lines. High expression of MD2 was associated with poor prognosis of HCC patients. In addition, MD2 silencing slightly inhibited the proliferation of HepG2 and HCCLM3, and significantly suppressed cell migration and invasion. Furthermore, MD2 blockage could distinctly prevent the EMT process by increasing the protein and mRNA levels of E-cadherin and Occludin, and decreasing the levels of Vimentin, N-cadherin, and Snail. Finally, the phosphorylation level of EGFR as well as its downstream molecular Src, Akt, I-κBα, and p65 were downregulated in HCC cells with MD2 silencing. Conclusions Our findings suggest that high expression of MD2 may affect the EMT, migration, and invasion via modulation of the EGFR pathway in HCC cells.
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- 2021
41. Impact of CYP3A4/5 and ABCB1 polymorphisms on tacrolimus exposure and response in pediatric primary nephrotic syndrome
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Luo Fang, Huijuan Wang, Huifen Zhang, Lingfei Huang, Zhengyi Zhu, Jianhua Mao, Yinghua Ni, Junyan Wang, Yuanyuan Wu, Peng Gao, and Jufei Yang
- Subjects
Pharmacology ,medicine.medical_specialty ,CYP3A4 ,business.industry ,Hazard ratio ,Time to relapse ,030204 cardiovascular system & hematology ,medicine.disease ,030226 pharmacology & pharmacy ,Gastroenterology ,Tacrolimus ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Genotype ,Genetics ,medicine ,Molecular Medicine ,business ,CYP3A5 ,Nephrotic syndrome - Abstract
Aim: To evaluate the impact of CYP3A4*1G, CYP3A5*3 and ABCB1-C3435T polymorphisms on tacrolimus concentrations, efficacy and tolerance in pediatric primary nephrotic syndrome. Methods: Dose-adjusted concentrations (C0/D), daily dose, frequency and time to relapse, cumulative remission days, and adverse reactions in 65 Chinese patients with various genotypes were retrospectively collected and compared. Results: C0/D increased in CYP3A4*1/*1, CYP3A5*3/*3 and CYP3A4*1/*1-3A5*3/*3 diplotype carriers by 38.4, 69.7 and 40.9% compared with CYP3A4*1/*1G, CYP3A5*1/*3 and noncarriers, respectively. Recurrence risks were decreased in CYP3A4*1/*1 (0.43 of hazard ratio to *1/*1G) and CYP3A5*3/*3 carriers (0.43 of hazard ratio to *1/*3). None of polymorphisms was linked to adverse reactions. Conclusion: The genotypes of CYP3A4*1G and CYP3A5*3 rather than ABCB1-C3435T potentially predicted tacrolimus exposure and clinical response in pediatric primary nephrotic syndrome.
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- 2019
42. Elevated proportion of collapsed microvessels indicate poor survival outcome in patients with non-small cell lung cancer
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Ping Huang, Yujia Liu, Yiwen Zhang, Xiaowei Zheng, Luying Hu, Yinghui Tong, Luo Fang, Yu Song, Jiao Sun, and Ying He
- Subjects
Adult ,Male ,0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,Lung Neoplasms ,medicine.medical_treatment ,Lumen (anatomy) ,Survival outcome ,03 medical and health sciences ,0302 clinical medicine ,Carcinoma, Non-Small-Cell Lung ,Internal medicine ,Biomarkers, Tumor ,medicine ,Humans ,In patient ,Lung cancer ,Aged ,Neoplasm Staging ,Chemotherapy ,Neovascularization, Pathologic ,business.industry ,General Medicine ,Middle Aged ,Prognosis ,medicine.disease ,Immunohistochemistry ,Survival Analysis ,Predictive factor ,030104 developmental biology ,Tumor progression ,030220 oncology & carcinogenesis ,Microvessels ,Female ,Non small cell ,Neoplasm Grading ,business - Abstract
Background: An integral and well-functioning vascular system is essential for tumor progression and chemotherapy infusion. However, the lumen integrity of the microvessels and its significance in prognosis has not been studied. In this study, we found that the proportion of collapsed microvessels is suggested to be a novel biomarker for predicting prognosis in patients with non-small cell lung cancer (NSCLC). Methods: In this study, immunohistochemical CD31 staining was performed to identify the microvessels in tumor specimens. Proportions of collapsed vessels were estimated in CD31-stained tumor specimens from 100 patients with NSCLC. The correlation between collapsed microvessel proportion and survival time were evaluated by univariate and multivariate analysis. Results: Data from 99 patients were analyzed and a wide range of collapse–microvessel fraction was observed in 96 patients (1.4%–70%). Elevated collapse proportion (⩾6.5%) indicated poor overall survival in both univariate analysis ( p = 0.042) and multivariate analysis ( p = 0.014). Conclusions: Elevated proportion of collapsed microvessels indicted poor survival outcome in patients with NSCLC.
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- 2019
43. Cost-effectiveness analysis of durvalumab plus etoposide: platinum in the first-line therapy of extensive stage small-cell lung cancer from the Chinese payers' perspective
- Author
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Yinghui Tong, Guo-Nong Yang, Like Zhong, Bo Zhang, Haiying Ding, Gaoqi Xu, Wenxiu Xin, and Luo Fang
- Subjects
Oncology ,Male ,Cancer Research ,medicine.medical_specialty ,China ,Durvalumab ,Cost effectiveness ,medicine.medical_treatment ,Cost-Benefit Analysis ,Antibodies, Monoclonal, Humanized ,03 medical and health sciences ,0302 clinical medicine ,First line therapy ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,030212 general & internal medicine ,Etoposide ,Neoplasm Staging ,Platinum ,Randomized Controlled Trials as Topic ,Chemotherapy ,business.industry ,Antibodies, Monoclonal ,General Medicine ,Cost-effectiveness analysis ,Small Cell Lung Carcinoma ,Markov Chains ,Progression-Free Survival ,030220 oncology & carcinogenesis ,Female ,Quality-Adjusted Life Years ,business ,Tremelimumab ,Extensive-stage small cell lung cancer ,medicine.drug - Abstract
Introduction: Results from the CASPIAN trial (Durvalumab ± Tremelimumab in Combination With Platinum Based Chemotherapy in Untreated Extensive-Stage Small Cell Lung Cancer) trial demonstrated the clinical benefit of durvalumab plus etoposide–platinum (EP) chemotherapy as first-line treatment for patients with extensive stage small-cell lung cancer (ES-SCLC). However, considering the high price of durvalumab, it is unclear whether addition of durvalumab to EP chemotherapy has economic value compared with EP alone. In this study, we aimed to evaluate the cost-effectiveness of durvalumab plus EP chemotherapy as a first-line treatment for patients with ES-SCLC. Methods: A Markov model comprising three health states (stable, progressive, and dead) was developed to simulate the process of small-cell lung cancer. Utility and costs were obtained from published resources. Health outcomes were derived from the CASPIAN trial. Costs were calculated based on the standard medical fees in Zhejiang Province from Chinese patients’ perspective. Utility values were obtained from published data. One-way and probabilistic sensitivity analyses were applied to verify model robustness. Results The addition of durvalumab to EP chemotherapy costs more than $32,220, with a gain of 0.14 quality-adjusted life years (QALYs) compared with EP alone. The incremental cost-effective ratio was $230,142.9 per QALY, which exceeds the willingness to pay threshold of $28,527 per QALY. In the sensitivity analysis, the utility values for the progressive state, costs of durvalumab and EP chemotherapy, and costs for the progressive state were considered to be the three most sensitive factors in the model. Conclusion: The addition of durvalumab to EP chemotherapy is not a cost-effective strategy in the first-line therapy of ES-SCLC from the Chinese payers’ perspective.
- Published
- 2021
44. Integrated Transcriptomics and Reverse Pharmacophore Mapping-based Network Pharmacology to Explore the Mechanisms of Natural Compounds against Doxorubicin-induced Cardiotoxicity
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Xiaojiao Yi, Haiying Ding, Junfeng Zhu, Like Zhong, and Luo Fang
- Subjects
Cardiotoxicity ,Bioinformatics analysis ,Organic Chemistry ,General Medicine ,Computational biology ,Biology ,Network Pharmacology ,Computer Science Applications ,Transcriptome ,Gene expression database ,Interaction network ,Doxorubicin ,Network pharmacology ,Drug Discovery ,medicine ,Humans ,Myocytes, Cardiac ,Pharmacophore ,medicine.drug - Abstract
Background: Doxorubicin-Induced Cardiotoxicity (DIC) has greatly limited the clinical benefits of this frontline drug in oncotherapy. Drug combination with Natural Compounds (NCs) that possess potency against DIC is considered as a promising intervention strategy. However, the Mechanisms of Action (MoAs) underlying such drug interactions remain poorly understood. The aim of this study was to systematically pursuit of the molecular mechanisms of NCs against DIC. Methods: First, the gene expression signatures of DIC were characterized from transcriptomics datasets with doxorubicin-treated and untreated cardiomyocytes using differentially expressed gene identification, functional enrichment analysis, and protein-protein interaction network analysis. Secondly, reverse pharmacophore mapping-based network pharmacology was employed to illustrate the MoAs of 82 publicly reported NCs with anti-DIC potency. Cluster analysis based on their enriched pathways was performed to gain systematic insights into the anti-DIC mechanisms of the NCs. Finally, the typical compounds were validated using Gene Set Enrichment Analysis (GSEA) of the relevant gene expression profiles from a public gene expression database. Results: Based on their anti-DIC MoAs, the 82 NCs could be divided into four groups, which corresponded to ten MoA clusters. GSEA and literature evidence on these compounds were provided to validate the MoAs identified through this bioinformatics analysis. The results suggested that NCs exerted potency against DIC through both common and different MoAs. Conclusion: This strategy integrating different types of bioinformatics approaches is expected to create new insights for elucidating the MoAs of NCs against DIC.
- Published
- 2021
45. Additional file 3 of Targeted gene correction and functional recovery in achondroplasia patient-derived iPSCs
- Author
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Zou, Huan, Guan, Mingfeng, Li, Yundong, Luo, Fang, Wang, Wenyuan, and Qin, Yiren
- Abstract
Additional file 3. Gene correction of ACH-iPSCs.
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- 2021
- Full Text
- View/download PDF
46. Additional file 2 of Targeted gene correction and functional recovery in achondroplasia patient-derived iPSCs
- Author
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Zou, Huan, Guan, Mingfeng, Li, Yundong, Luo, Fang, Wang, Wenyuan, and Qin, Yiren
- Abstract
Additional file 2: Table S1. The sequences of the primers for off-target sites.
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- 2021
- Full Text
- View/download PDF
47. Additional file 1 of Whole-brain morphological alterations associated with trigeminal neuralgia
- Author
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Mo, Jiajie, Zhang, Jianguo, Hu, Wenhan, Luo, Fang, and Zhang, Kai
- Abstract
Additional file 1: Table S1. Classification performance with different models and cross-validation strategies.
- Published
- 2021
- Full Text
- View/download PDF
48. Additional file 1 of Targeted gene correction and functional recovery in achondroplasia patient-derived iPSCs
- Author
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Zou, Huan, Guan, Mingfeng, Li, Yundong, Luo, Fang, Wang, Wenyuan, and Qin, Yiren
- Abstract
Additional file 1. Supplementary material and method - Gene correction of ACH-iPSCs.
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- 2021
- Full Text
- View/download PDF
49. [Study on anti-osteoporosis effect of Eucommiae Cortex based on GC-MS metabonomics]
- Author
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Wang, Fang-Jie, Wang, Ting, Luo, Fang-Mei, Zhang, Chuan-Xiang, and Liu, Shao
- Subjects
Bone Density ,Animals ,Metabolomics ,Osteoporosis ,Biomarkers ,Gas Chromatography-Mass Spectrometry ,Rats - Abstract
Based on GC-MS metabolomics and biochemical index analysis, the mechanism of bone mass loss in osteoporosis and the evaluation of anti-osteoporosis in Eucommiae Cortex were studied. The OVX rats model was established by bilateral ovariectomized. The routine indexes such as BMC, BMD, BGP and TRAP5 b were determined. The GC-MS technique was used to analyze the metabolism profile of serum samples between the control group, model group and medicine group, and multiple statistical analysis methods including principal component analysis(PCA), partial least squares-linear discriminant analysis(PLS-LDA) and subwindow rearrangement analysis(SPA) were used to screen and identify biomarkers. Five metabolites were selected as potential biomarkers, glycine, lysine, tryptophan, docosahexaenoic acid and glucose. Except for the significant increase of tryptophan in serum of OVX rats, the other four metabolites were significantly decreased. Moreover, the five biomarkers of the medicine group had a trend of returning to rats in control group. The significantly altered metabolite levels indicated that Eucommiae Cortex may relieve the symptoms of osteoporosis by regulating amino acid metabolism and oxidative stress.
- Published
- 2020
50. The hyperpolarization-activated cyclic nucleotide-gated channel currents contribute to oxaliplatin-induced hyperexcitability of DRG neurons
- Author
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Zhang Yongning, Lin Xianguang, Li Chenhong, Chen Hengling, Luo Fang, and Chen Su
- Subjects
Physiology ,Cyclic Nucleotide-Gated Cation Channels ,03 medical and health sciences ,0302 clinical medicine ,Dorsal root ganglion ,Ganglia, Spinal ,medicine ,HCN channel ,Hyperpolarization-Activated Cyclic Nucleotide-Gated Channels ,Animals ,Neurons ,biology ,Chemistry ,Cyclic-Nucleotide Gated Channel ,Depolarization ,Hyperpolarization (biology) ,digestive system diseases ,Sensory Systems ,Oxaliplatin ,Rats ,medicine.anatomical_structure ,Hyperalgesia ,030220 oncology & carcinogenesis ,Biophysics ,biology.protein ,medicine.symptom ,Ivabradine ,030217 neurology & neurosurgery ,medicine.drug - Abstract
Humans are likely to experience mechanical allodynia and cold hyperalgesia after oxaliplatin intravenous injection. The mechanism by which oxaliplatin leads to these side effects is unknown. Since the hyperpolarization-activated cyclic nucleotide-gated (HCN) channels are involved in the automatic depolarization of action potentials, we speculated that HCN channels are involved in oxaliplatin-induced hyperalgesia through action potentials. Our results showed that the density of HCN channel currents and the excitability of dorsal root ganglion neurons both increased after oxaliplatin perfusion at the cellular level. The neuronal hyperexcitability could be alleviated by ivabradine. Ivabradine inhibited oxaliplatin-induced mechanical allodynia and cold hyperalgesia at the individual rat level. Oxaliplatin enhanced the function of HCN channels, which in turn promoted the automatic depolarization of action potentials. The acceleration of automatic depolarization excited the neurons and caused more rapid firing of action potentials. Therefore, the HCN channel is a potential therapeutic target for the hyperalgesia induced by oxaliplatin.
- Published
- 2020
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