262 results on '"Leyssen, A."'
Search Results
2. Semi-probabilistic flood risk analysis including climate change uncertainties
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Fernando Pereira, Jiri Nossent, Gert Leyssen, Els Van Uytven, Joris Blanckaert, Roeland Adams, and Tim Franken
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Flood risk analysis is of the utmost importance for policy makers and water managers as an input for the design and management of water bodies. In order to assess the frequency and severity of potential extreme floods, both data analysis and modelling, or even a combined approach can be employed. However, the spatial and temporal context of flood events is often complex, in particular when the extreme water levels can be caused by a combination of extreme upstream discharges, extreme downstream water levels and/or extreme wind events, and given the additional impact of climate change. This complexity hampers a straightforward analysis and extrapolation of rare flood events. We therefore present a semi-probabilistic flood risk analysis, that combines an ensemble approach, using different hydrological models and various climate scenarios, with a methodology that describes the extreme domain of the different flood drivers by a nested Copula. The latter Copula is based on the individual univariate extreme value distributions of each of the drivers. Synthetic design conditions for different return periods can be generated by a stratification of the obtained probability domain for extreme events. An application for the catchment of the River Scheldt in Belgium will be used to illustrate the presented approach for flood risk analysis, including an ensemble of 3 hydrological models, multiple climate scenarios for different time horizons and different projections of sea level rise.
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- 2023
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3. Development and optimization of a high‐throughput screening assay for in vitro anti‐SARS‐CoV‐2 activity: Evaluation of 5676 Phase 1 Passed Structures
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Winston Chiu, Lore Verschueren, Christel Van den Eynde, Christophe Buyck, Sandra De Meyer, Dirk Jochmans, Denisa Bojkova, Sandra Ciesek, Jindrich Cinatl, Steven De Jonghe, Pieter Leyssen, Johan Neyts, Marnix Van Loock, and Ellen Van Damme
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SARS coronavirus ,SARS-CoV-2 ,coronavirus ,Antiviral Agents ,High-Throughput Screening Assays ,COVID-19 Drug Treatment ,Infectious Diseases ,Virology ,antiviral agents ,Chlorocebus aethiops ,Animals ,Humans ,Caco-2 Cells ,Pandemics - Abstract
Although vaccines are currently used to control the coronavirus disease 2019 (COVID-19) pandemic, treatment options are urgently needed for those who cannot be vaccinated and for future outbreaks involving new severe acute respiratory syndrome coronavirus virus 2 (SARS-CoV-2) strains or coronaviruses not covered by current vaccines. Thus far, few existing antivirals are known to be effective against SARS-CoV-2 and clinically successful against COVID-19. As part of an immediate response to the COVID-19 pandemic, a high-throughput, high content imaging-based SARS-CoV-2 infection assay was developed in VeroE6 African green monkey kidney epithelial cells expressing a stable enhanced green fluorescent protein (VeroE6-eGFP cells) and was used to screen a library of 5676 compounds that passed Phase 1 clinical trials. Eight drugs (nelfinavir, RG-12915, itraconazole, chloroquine, hydroxychloroquine, sematilide, remdesivir, and doxorubicin) were identified as inhibitors of in vitro anti-SARS-CoV-2 activity in VeroE6-eGFP and/or Caco-2 cell lines. However, apart from remdesivir, toxicity and pharmacokinetic data did not support further clinical development of these compounds for COVID-19 treatment. ispartof: JOURNAL OF MEDICAL VIROLOGY vol:94 issue:7 pages:3101-3111 ispartof: location:United States status: published
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- 2022
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4. Flangeless horseshoe maxillary complete denture: a prosthodontic solution to maxillary tori
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Sandeep Pai and Wouter Leyssen
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General Dentistry - Abstract
Tori may present difficulties in achieving a retentive prosthesis with full palatal coverage. Management of tori in such cases may involve attempting to avoid coverage of the torus, providing relief over the torus, or surgical reduction/removal. This article presents a case where a patient who presented with a large maxillary torus was managed with a non-surgical approach, which enabled provision of a successful prosthesis. Dental practitioners could consider this approach for selected cases. CPD/Clinical Relevance: Thorough prior planning and a modified denture design can be used to provide an effective clinical solution for maxillary and mandibular tori.
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- 2022
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5. Safety and immunogenicity of the two-dose heterologous Ad26.ZEBOV and MVA-BN-Filo Ebola vaccine regimen in children in Sierra Leone: a randomised, double-blind, controlled trial
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Muhammed O Afolabi, David Ishola, Daniela Manno, Babajide Keshinro, Viki Bockstal, Baimba Rogers, Kwabena Owusu-Kyei, Alimamy Serry-Bangura, Ibrahim Swaray, Brett Lowe, Dickens Kowuor, Frank Baiden, Thomas Mooney, Elizabeth Smout, Brian Köhn, Godfrey T Otieno, Morrison Jusu, Julie Foster, Mohamed Samai, Gibrilla Fadlu Deen, Heidi Larson, Shelley Lees, Neil Goldstein, Katherine E Gallagher, Auguste Gaddah, Dirk Heerwegh, Benoit Callendret, Kerstin Luhn, Cynthia Robinson, Brian Greenwood, Maarten Leyssen, Macaya Douoguih, Bailah Leigh, Deborah Watson-Jones, M Kargbo, E Bockarie, N L James, A Kabbah, A Kamara, K H Koroma, S O Langley, N William, R Kessebeh, T Mooney, L Conteh, E Smout, K Allieu, K Bangura, M S Bangura, M A Bangura, H Jalloh, A B Jalloh, I Kamara, M Kamara, A Konteh, S Koroma, C Marrah, M Sesay, M T Sesay, A T Deen, A Jalloh, R M Kaimbay, D Kain, E L Kamara, M P Kamara, O J Kamara, S L M Kamara, M Kanneh, A H Koroma, D Lahai, I S Mansaray, W S Marah, M J Massaquoi, A Nabie, N S Saidu, I Samai, J N Tengheh, A S Turay, A Fornah, F Sesay, A Sow, E Swaray, F Mansaray, T Ade-Cole, L M Bangura, M L Conteh, A M Koroma, M Koroma, A Sam, T Scott, T Sessie, J-H C Sunders, S I-S Turay, J Weekes, M Sheku, L Gibson, D Kowuor, I Ahamed, W Allieu, D U Kabba, F J Kamara, M S Kebbie, M Pessima, A Wurie, F Bah, A I Bangura, R A S Bangura, L Blango, S Boima, M Conteh, Y Conteh, M L Daramy, O Fofanah, E George, T F Hanson, M I Jalloh, M Kalawa, A M Kamara, F E Kamara, G M Kamara, H M Kamara, P B D Kamara, R T Kamara, R Kamara, D P Kanneh, I Komeh, M Kuyateh, F F Mansaray, M M Mansaray, A B Sillah, M A Tarawally, O S Turya, J B Yawmah, B Leigh, D Watson-Jones, B Greenwood, M H Samai, G F Deen, D Marke, T Sesay, P Piot, P Smith, J Edmunds, S Lees, H Larson, H Weiss, P Wilson, R Phillips, C Maxwell, D Ishola, M Afolabi, F Baiden, P Akoo, K Owusu-Kyei, D Tindanbil, H Bower, J Stuart, O M Bah, B T Rogers, A Serry-Bangura, I B Swaray, A Bangura, I J David, D G M Davies, J A Kallon, A B Kamara, I F Kamara, M M Kamara, F E Morovia, F B Suma, F Thompson, M Murray, O Kakay, F Suma, I Sesay, J Foster, D Manno, K Gallagher, S Cox, N Howard, M Cesay, P Torrani, S Sharma, E Snowden, T Banks, T Harber, J Brown, K Howard, N Melton, S Malcolm, S Welsh, R Eggo, M Jendrossek, C Pearson, K Offergeld, C Ferrault, M Van Alst, N Mahajan, M Van Looveren, S Van Ballaert, T De Cnodder, N Grobler, L Roza, T Liberi, L Armishaw, C Verkleij, T Henrick, A Banaszkiewicz, B Lowe, K Awuondo, H Hafezi, E Hancox, B Kohn, G O Tuda, G Bangura, M T Kroma, L Fofanah, A Pessima, M Rogers, O Sheriff, T W Ajala, J Fangawa, S Foday Jr, I S F Koroma, B Mansaray, H A Mansaray, K Sesay, M K Charles, P C Heroe, M Lamin Karbo, I S Yansaneh, S Gogo Egoeh, A Trye, M Amponsah, L Donelson, T Sylvester, V Owira, G Onyuka, L Nambuchi, A Oburu, D Apollo, L Vandi, N D Alghali, A Bah, I J Bangura, A C Cole, S Fofanah, H U Jalloh, K F N Jalloh, N Jalloh, H U Kabba, J N Kabba, M Kabba, J S Kamara, F Kanjie, A P Kanu, I Kargbo, G Kassa-Koroma, S B Koroma, A Sankoh, T Sankoh, O D Sesay, H Wilhem, C T Williams, I Bangura, Y Ben-Rogers, F J Jamboria, N Kamara, I Kanawah, A T Kargbo, I Swaray, L Amara, I Bundu, H B Jakema, K Kamara, M F Sheku, Q Adeleye, I Akhigbe, R Bakalemwa, N P Chami, L Altmann, B Kamara, K van Roey, P Conteh, M Samura, V Gandie, M Marrah, E Moinina, J Kalokoh, S Bosompem, T Hilton, M O Jusu, P Borboh, A S Brima, A F Y Caulker, A Kallon, B Koroma, R C Macauley, T M D Saquee, H I Williams, A R Bangura, J Fornah, B Idriss, M Sillah, W Mackay, B Aleghen, T Murray, J Edem-Hotah, T Fatorma, F Amara, S Bangura, E Bonnie, M Sannoh, A Donaldson, S Ndingi, D Nyaberi, M Pereira, A Rothwell, V Vy, L Nyallay, A Fombah, S Saidu, T P Dambo, P J Fakaba, M M E Fatorma, R H Freeman, C L Johnson, D B Kogba, A Lahai, W Vincent, N Yambasu, M Bangura, A Tengbeh, R Kabia, A M Nyakoi, M Callaghan, L Enria, and S Lee
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Male ,Modified vaccinia Ankara ,Pediatrics ,medicine.medical_specialty ,Adolescent ,Antibodies, Viral ,medicine.disease_cause ,Injections, Intramuscular ,Drug Administration Schedule ,Sierra Leone ,Sierra leone ,Immunogenicity, Vaccine ,Vaccines, DNA ,Humans ,Medicine ,Ebola Vaccines ,Child ,Reactogenicity ,Heterologous vaccine ,Ebola virus ,Ebola vaccine ,business.industry ,Infant ,Viral Vaccines ,Ebolavirus ,Vaccination ,Regimen ,Infectious Diseases ,Child, Preschool ,Female ,business - Abstract
Summary Background Children account for a substantial proportion of cases and deaths from Ebola virus disease. We aimed to assess the safety and immunogenicity of a two-dose heterologous vaccine regimen, comprising the adenovirus type 26 vector-based vaccine encoding the Ebola virus glycoprotein (Ad26.ZEBOV) and the modified vaccinia Ankara vector-based vaccine, encoding glycoproteins from the Ebola virus, Sudan virus, and Marburg virus, and the nucleoprotein from the Tai Forest virus (MVA-BN-Filo), in a paediatric population in Sierra Leone. Methods This randomised, double-blind, controlled trial was done at three clinics in Kambia district, Sierra Leone. Healthy children and adolescents aged 1–17 years were enrolled in three age cohorts (12–17 years, 4–11 years, and 1–3 years) and randomly assigned (3:1), via computer-generated block randomisation (block size of eight), to receive an intramuscular injection of either Ad26.ZEBOV (5 × 1010 viral particles; first dose) followed by MVA-BN-Filo (1 × 108 infectious units; second dose) on day 57 (Ebola vaccine group), or a single dose of meningococcal quadrivalent (serogroups A, C, W135, and Y) conjugate vaccine (MenACWY; first dose) followed by placebo (second dose) on day 57 (control group). Study team personnel (except for those with primary responsibility for study vaccine preparation), participants, and their parents or guardians were masked to study vaccine allocation. The primary outcome was safety, measured as the occurrence of solicited local and systemic adverse symptoms during 7 days after each vaccination, unsolicited systemic adverse events during 28 days after each vaccination, abnormal laboratory results during the study period, and serious adverse events or immediate reportable events throughout the study period. The secondary outcome was immunogenicity (humoral immune response), measured as the concentration of Ebola virus glycoprotein-specific binding antibodies at 21 days after the second dose. The primary outcome was assessed in all participants who had received at least one dose of study vaccine and had available reactogenicity data, and immunogenicity was assessed in all participants who had received both vaccinations within the protocol-defined time window, had at least one evaluable post-vaccination sample, and had no major protocol deviations that could have influenced the immune response. This study is registered at ClinicalTrials.gov , NCT02509494 . Findings From April 4, 2017, to July 5, 2018, 576 eligible children or adolescents (192 in each of the three age cohorts) were enrolled and randomly assigned. The most common solicited local adverse event during the 7 days after the first and second dose was injection-site pain in all age groups, with frequencies ranging from 0% (none of 48) of children aged 1–3 years after placebo injection to 21% (30 of 144) of children aged 4–11 years after Ad26.ZEBOV vaccination. The most frequently observed solicited systemic adverse event during the 7 days was headache in the 12–17 years and 4–11 years age cohorts after the first and second dose, and pyrexia in the 1–3 years age cohort after the first and second dose. The most frequent unsolicited adverse event after the first and second dose vaccinations was malaria in all age cohorts, irrespective of the vaccine types. Following vaccination with MenACWY, severe thrombocytopaenia was observed in one participant aged 3 years. No other clinically significant laboratory abnormalities were observed in other study participants, and no serious adverse events related to the Ebola vaccine regimen were reported. There were no treatment-related deaths. Ebola virus glycoprotein-specific binding antibody responses at 21 days after the second dose of the Ebola virus vaccine regimen were observed in 131 (98%) of 134 children aged 12–17 years (9929 ELISA units [EU]/mL [95% CI 8172–12 064]), in 119 (99%) of 120 aged 4–11 years (10 212 EU/mL [8419–12 388]), and in 118 (98%) of 121 aged 1–3 years (22 568 EU/mL [18 426–27 642]). Interpretation The Ad26.ZEBOV and MVA-BN-Filo Ebola vaccine regimen was well tolerated with no safety concerns in children aged 1–17 years, and induced robust humoral immune responses, suggesting suitability of this regimen for Ebola virus disease prophylaxis in children. Funding Innovative Medicines Initiative 2 Joint Undertaking and Janssen Vaccines & Prevention BV.
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- 2022
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6. Mouth preparation for complete dentures
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Wouter Leyssen, Anthony Walmsley, and Noha Abdelaziz
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business.industry ,medicine.medical_treatment ,Medicine ,Dentistry ,Dentures ,business ,General Dentistry - Abstract
The success of complete dentures is highly dependent on the anatomy of the oral cavity. Several conditions can affect the final denture fit. Disorders of the soft tissues, such as denture hyperplasia, denture stomatitis and mucosal pathology may play a role. There are also difficulties related to the shape of the bone, including excessively large undercuts/bony exostoses, tori, enlarged tuberosities and flabby ridges and other factors, such as xerostomia to be considered. The aim of this article is to help diagnose these conditions and to suggest ways of overcoming the individual problems with which patients present before starting denture construction. CPD/Clinical Relevance: The diagnosis of several oral conditions and their appropriate management may help achieve an optimal outcome when constructing complete dentures.
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- 2021
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7. Imagineering ‘Mission-Oriented Branding’
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Diane Nijs and Johan Leyssen
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- 2022
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8. Bis(Benzofuran-1,3
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Nitesh K, Gupta, Srinivasan, Jayakumar, Wen-Chieh, Huang, Pieter, Leyssen, Johan, Neyts, Sergey O, Bachurin, Jih Ru, Hwu, and Shwu-Chen, Tsay
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Synthetic Drugs ,Yellow Fever Vaccine ,Animals ,Benzimidazoles ,Yellow fever virus ,Antiviral Agents ,Benzofurans - Abstract
The yellow fever virus (YFV) is an emerging RNA virus and has caused large outbreaks in Africa and Central and South America. The virus is often transmitted through infected mosquitoes and spreads from area to area because of international travel. Being an acute viral hemorrhagic disease, yellow fever can be prevented by an effective, safe, and reliable vaccine, but not be eliminated. Currently, there is no antiviral drug available for its cure. Thus, two series of novel bis(benzofuran-1,3-imidazolidin-4-one)s and bis(benzofuran-1,3-benzimidazole)s were designed and synthesized for the development of anti-YFV lead candidates. Among 23 new bis-conjugated compounds, 4 of them inhibited YFV strain 17D (Stamaril) on Huh-7 cells in the cytopathic effect reduction assays. These conjugates exhibited the most compelling efficacy and selectivity with an EC
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- 2022
9. Remaking 'Michotte': Reusing and Remaking Moving Images in the History of Perception Research
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Sigrid Leyssen
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History ,History and Philosophy of Science ,Point (typography) ,Perception ,media_common.quotation_subject ,Short Film ,Earth and Planetary Sciences (miscellaneous) ,Art history ,Art ,media_common - Abstract
The starting point of this essay is a short film of an optical effect, published in 1998 by the Institute for Scientific Film (Institut fur den Wissenschaftlichen Film [IWF]) as part of a s...
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- 2021
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10. A Double-Blind, Randomized, Placebo-Controlled Phase 1 Study of Ad26.ZIKV.001, an Ad26-Vectored Anti–Zika Virus Vaccine
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Roland Zahn, Carlos Fierro, Maarten Leyssen, Marrit N. Habets, Kayvon Modjarrad, Rafael A. Larocca, Carla Truyers, Hanneke Schuitemaker, Leslie van der Fits, Diane G. Kanjilal, Kristi Lynn Williams, Nadine C. Salisch, Jenny Hendriks, Kathryn E. Stephenson, Macaya Douoguih, Johan Van Hoof, Dan H. Barouch, Conor P. Cahill, Freek Cox, Dirk Heerwegh, Jinyan Liu, Peter Abbink, Lauren Peter, and Rafael De La Barrera
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Adult ,Male ,Population ,01 natural sciences ,Adenoviridae ,Zika virus ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Double-Blind Method ,Internal Medicine ,Animals ,Humans ,Medicine ,030212 general & internal medicine ,0101 mathematics ,Seroconversion ,Adverse effect ,education ,education.field_of_study ,biology ,Zika Virus Infection ,business.industry ,Immunogenicity ,010102 general mathematics ,Viral Vaccines ,Zika Virus ,General Medicine ,biology.organism_classification ,Virology ,United States ,Vaccination ,Titer ,Regimen ,Female ,business - Abstract
BACKGROUND: Zika virus (ZIKV) may cause severe congenital disease after maternal-fetal transmission. No vaccine is currently available. OBJECTIVE: To assess the safety and immunogenicity of Ad26.ZIKV.001, a prophylactic ZIKV vaccine candidate. DESIGN: Phase 1 randomized, double-blind, placebo-controlled clinical study. (ClinicalTrials.gov: NCT03356561). SETTING: United States. PARTICIPANTS: 100 healthy adult volunteers. INTERVENTION: Ad26.ZIKV.001, an adenovirus serotype 26 vector encoding ZIKV M-Env, administered in 1- or 2-dose regimens of 5 × 1010 or 1 × 1011 viral particles (vp), or placebo. MEASUREMENTS: Local and systemic adverse events; neutralization titers by microneutralization assay (MN50) and T-cell responses by interferon-I³ enzyme-linked immunospot and intracellular cytokine staining; and protectivity of vaccine-induced antibodies in a subset of participants through transfer in an exploratory mouse ZIKV challenge model. RESULTS: All regimens were well tolerated, with no safety concerns identified. In both 2-dose regimens, ZIKV neutralizing titers peaked 14 days after the second vaccination, with geometric mean MN50 titers (GMTs) of 1065.6 (95% CI, 494.9 to 2294.5) for 5 × 1010 vp and 956.6 (595.8 to 1535.8) for 1 × 1011 vp. Titers persisted for at least 1 year at a GMT of 68.7 (CI, 26.4-178.9) for 5 × 1010 vp and 87.0 (CI, 29.3 to 258.6) for 1 × 1011 vp. A 1-dose regimen of 1 × 1011 vp Ad26.ZIKV.001 induced seroconversion in all participants 56 days after the first vaccination (GMT, 103.4 [CI, 52.7 to 202.9]), with titers persisting for at least 1 year (GMT, 90.2 [CI, 38.4 to 212.2]). Env-specific cellular responses were induced. Protection against ZIKV challenge was observed after antibody transfer from participants into mice, and MN50 titers correlated with protection in this model. LIMITATION: The study was conducted in a nonendemic area, so it did not assess safety and immunogenicity in a flavivirus-exposed population. CONCLUSION: The safety and immunogenicity profile makes Ad26.ZIKV.001 a promising candidate for further development if the need reemerges. PRIMARY FUNDING SOURCE: Janssen Vaccines and Infectious Diseases.
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- 2021
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11. Design, Synthesis, and Lead Optimisation of CHVB Series Analogues as Potent Small Molecule Inhibitors of Chikungunya Virus
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Verena Battisti, Julia Moesslacher, Rana Abdelnabi, Pieter Leyssen, Ana Lucia Rosales Rosas, Lana Langendries, Mohammed Aufy, Christian Studenik, Jadel Kratz, Judith M. Rollinger, Gerhard Puerstinger, Johan Neyts, Leen Delang, Ernst Urban, and Thierry Langer
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The worldwide re-emerge of the Chikungunya virus (CHIKV), the high morbidity associated with it, and the lack of an available vaccine or antiviral treatment make the development of a potent CHIKV-inhibitor highly desirable. Therefore, an extensive lead optimisation was performed based on the previously reported CHVB compound 1b and the reported synthesis route was optimised - improving the overall yield in remarkable shorter synthesis and work-up time. 100 CHVB analogues were designed, synthesised, and investigated for their antiviral activity, physiochemistry, and toxicological profile. An extensive structure-activity relationship study (SAR) was performed, which focused mainly on the combination of scaffold changes and revealed the key chemical features for a high anti-CHIKV inhibition. Further, to investigate the druggability of the compound series, a thorough ADMET investigation was carried out: the compounds were screened for their aqueous solubility, lipophilicity, their toxicity in CaCo-2 cells, and possible hERG channel interactions. Additionally, 55 analogues were assessed for their metabolic stability in human liver microsomes (HLMs) which led to a structure-metabolism relationship study (SMR). The compounds showed an excellent safety profile, favourable physicochemical characteristics, and the required metabolic stability. A cross-resistance study confirmed the viral capping machinery (nsP1) to be the viral target of these second-generation CHVB compounds. This study identified five compounds (31b, 31d, 32d, 34, and 35d) as potent, safe, and stable lead compounds for further development as selective CHIKV inhibitors - with 32d as the most promising candidate. Finally, the collected insight led to a successful scaffold hop (64b) for future antiviral research studies.
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- 2022
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12. Safety, reactogenicity, and immunogenicity of a 2-dose Ebola vaccine regimen of Ad26.ZEBOV followed by MVA-BN-Filo in healthy adult pregnant women: study protocol for a phase 3 open-label randomized controlled trial
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Etienne, Karita, Julien, Nyombayire, Rosine, Ingabire, Amelia, Mazzei, Tyronza, Sharkey, Jeannine, Mukamuyango, Susan, Allen, Amanda, Tichacek, Rachel, Parker, Frances, Priddy, Felix, Sayinzoga, Sabin, Nsanzimana, Cynthia, Robinson, Michael, Katwere, Dickson, Anumendem, Maarten, Leyssen, Malinda, Schaefer, and Kristin M, Wall
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Adult ,Clinical Trials, Phase III as Topic ,Pregnancy ,Vaccination ,Infant, Newborn ,Humans ,Medicine (miscellaneous) ,Female ,Pharmacology (medical) ,Pregnant Women ,Ebola Vaccines ,Hemorrhagic Fever, Ebola ,Randomized Controlled Trials as Topic - Abstract
Background Risks to mother and fetus following Ebola virus infection are very high. Evaluation of safety and immunogenicity of non-replicating Ebola vaccine candidates is a priority for use in pregnant women. This is the protocol for a randomized, open-label, single-center phase 3 clinical trial of the safety, reactogenicity, and immunogenicity of the 2-dose Ebola vaccine regimen in healthy adult pregnant women. This 2-dose regimen has been shown to be safe, judged effective, and approved in non-pregnant populations. Methods A total of 2000 adult (≥ 18 years of age) pregnant women will be enrolled from antenatal care facilities in Western Rwanda and randomized (1:1) to receive the 2-dose Ebola vaccine regimen (Ad26.ZEBOV, MVA-BN-Filo (group A)) or control (unvaccinated pregnant women (group B)). The primary objectives are to (1) assess adverse maternal/fetal outcomes in randomized pregnant women up to 1.5 months after delivery and (2) assess adverse neonatal/infant outcomes in neonates/infants born to randomized women up to 3.5 months after birth. The frequency and relatedness of all serious adverse events in women and newborns from randomization or birth, respectively, until study end will be reported. The reactogenicity and unsolicited adverse events of the 2-dose Ebola vaccine regimen in all vaccinated pregnant women (group A) will be reported. We will also assess the immunogenicity of the 2-dose Ebola vaccine regimen in 150 pregnant women who are anticipated to receive both vaccine doses within the course of their pregnancy (a subset of the 1000 pregnant vaccinated women from group A) compared to 150 non-pregnant women vaccinated after delivery (a subset of group B). The persistence of maternal antibodies in 75 infants born to women from the group A subset will be assessed. Exploratory analyses include assessment of acceptability of the 2-dose Ebola vaccine regimen among group A and assessment of maternal antibodies in breast milk in 50 women from group A and 10 controls (women from group B prior to vaccination). Discussion This study is intended to support a label variation to relax restrictions on use in pregnant women, a vulnerable population with high medical need. Trial registration Clinicaltrials.gov NCT04556526. September 21, 2020.
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- 2022
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13. Is a Ridge Classification Helpful when Assessing Edentulous Patients?
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Kasim Butt, Anthony Walmsley, and Wouter Leyssen
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Orthodontics ,Ridge (meteorology) ,General Dentistry ,Geology - Abstract
The edentulous ridge classifications most commonly used have their limitations in treatment planning. They do not provide an indication of the complexities that may occur when constructing a new set of complete dentures. The new classification system suggested in this article helps with improved record-keeping, information exchange between colleagues, and communication between patient and clinician. CPD/Clinical Relevance: The new edentulous ridge classification system links the various edentulous ridge shapes to possible complications that could arise during denture construction.
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- 2020
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14. Non-human primate to human immunobridging demonstrates a protective effect of Ad26.ZEBOV, MVA-BN-Filo vaccine against Ebola
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Viki Bockstal, Maarten Leyssen, Dirk Heerwegh, Bart Spiessens, Cynthia Robinson, Jeroen N. Stoop, Ramon Roozendaal, Thierry Van Effelterre, Auguste Gaddah, Griet A. Van Roey, Laura Solforosi, Roland Zahn, Benoit Callendret, Jenny Hendriks, Kerstin Luhn, Macaya Douoguih, Hanneke Schuitemaker, and Johan Van Hoof
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Pharmacology ,Infectious Diseases ,Immunology ,Pharmacology (medical) - Abstract
Without clinical efficacy data, vaccine protective effect may be extrapolated from animals to humans using an immunologic marker that correlates with protection in animals. This immunobridging approach was used for the two-dose Ebola vaccine regimen Ad26.ZEBOV, MVA-BN-Filo. Ebola virus (EBOV) glycoprotein binding antibody data obtained from 764 vaccinated healthy adults in five clinical studies (NCT02416453, NCT02564523, NCT02509494, NCT02543567, NCT02543268) were used to calculate mean predicted survival probability (with preplanned 95% confidence interval [CI]). We used a logistic regression model based on EBOV glycoprotein binding antibody responses in vaccinated non-human primates (NHPs) and NHP survival after EBOV challenge. While the protective effect of the vaccine regimen in humans can be inferred in this fashion, the extrapolated survival probability cannot be directly translated into vaccine efficacy. The primary immunobridging analysis evaluated the lower limit of the CI against predefined success criterion of 20% and passed with mean predicted survival probability of 53.4% (95% CI: 36.7–67.4).
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- 2022
15. Protocol for a phase 3 trial to evaluate the effectiveness and safety of a heterologous, two-dose vaccine for Ebola virus disease in the Democratic Republic of the Congo
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Deborah, Watson-Jones, Hugo, Kavunga-Membo, Rebecca F, Grais, Steve, Ahuka, Natalie, Roberts, W John, Edmunds, Edward M, Choi, Chrissy H, Roberts, Tansy, Edwards, Anton, Camacho, Shelley, Lees, Maarten, Leyssen, Bart, Spiessens, Kerstin, Luhn, Macaya, Douoguih, Richard, Hatchett, Daniel G, Bausch, Jean-Jacques, Muyembe, and Ira M, Longini
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Adult ,Clinical Trials, Phase III as Topic ,Democratic Republic of the Congo ,COVID-19 ,Humans ,Female ,General Medicine ,Ebola Vaccines ,Hemorrhagic Fever, Ebola ,Child ,Immunization Schedule - Abstract
IntroductionEbola virus disease (EVD) continues to be a significant public health problem in sub-Saharan Africa, especially in the Democratic Republic of the Congo (DRC). Large-scale vaccination during outbreaks may reduce virus transmission. We established a large population-based clinical trial of a heterologous, two-dose prophylactic vaccine during an outbreak in eastern DRC to determine vaccine effectiveness.Methods and analysisThis open-label, non-randomised, population-based trial enrolled eligible adults and children aged 1 year and above. Participants were offered the two-dose candidate EVD vaccine regimen VAC52150 (Ad26.ZEBOV, Modified Vaccinia Ankara (MVA)-BN-Filo), with the doses being given 56 days apart. After vaccination, serious adverse events (SAEs) were passively recorded until 1 month post dose 2. 1000 safety subset participants were telephoned at 1 month post dose 2 to collect SAEs. 500 pregnancy subset participants were contacted to collect SAEs at D7 and D21 post dose 1 and at D7, 1 month, 3 months and 6 months post dose 2, unless delivery was before these time points. The first 100 infants born to these women were given a clinical examination 3 months post delivery. Due to COVID-19 and temporary suspension of dose 2 vaccinations, at least 50 paediatric and 50 adult participants were enrolled into an immunogenicity subset to examine immune responses following a delayed second dose. Samples collected predose 2 and at 21 days post dose 2 will be tested using the Ebola viruses glycoprotein Filovirus Animal Non-Clinical Group ELISA. For qualitative research, in-depth interviews and focus group discussions were being conducted with participants or parents/care providers of paediatric participants.Ethics and disseminationApproved by Comité National d’Ethique et de la Santé du Ministère de la santé de RDC, Comité d'Ethique de l'Ecole de Santé Publique de l’Université de Kinshasa, the LSHTM Ethics Committee and the MSF Ethics Review Board. Findings will be presented to stakeholders and conferences. Study data will be made available for open access.Trial registration numberNCT04152486.
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- 2022
16. HIV protease inhibitors Nelfinavir and Lopinavir/Ritonavir markedly improve lung pathology in SARS-CoV-2-infected Syrian hamsters despite lack of an antiviral effect
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Caroline S. Foo, Rana Abdelnabi, Suzanne J.F. Kaptein, Xin Zhang, Sebastiaan ter Horst, Raf Mols, Leen Delang, Joana Rocha-Pereira, Lotte Coelmont, Pieter Leyssen, Kai Dallmeier, Valentijn Vergote, Elisabeth Heylen, Laura Vangeel, Arnab K. Chatterjee, Pieter P. Annaert, Patrick F. Augustijns, Steven De Jonghe, Dirk Jochmans, Mieke Gouwy, Seppe Cambier, Jennifer Vandooren, Paul Proost, Christine van Laer, Birgit Weynand, and Johan Neyts
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Pharmacology ,Nelfinavir ,Ritonavir ,Mesocricetus ,SARS-CoV-2 ,virus diseases ,HIV Infections ,HIV Protease Inhibitors ,biochemical phenomena, metabolism, and nutrition ,Lopinavir ,COVID-19 Drug Treatment ,immune system diseases ,Virology ,Cricetinae ,Animals ,RNA, Viral ,Lung - Abstract
Nelfinavir is an HIV protease inhibitor that has been widely prescribed as a component of highly active antiretroviral therapy, and has been reported to exert in vitro antiviral activity against SARS-CoV-2. We here assessed the effect of Nelfinavir in a SARS-CoV-2 infection model in hamsters. Despite the fact that Nelfinavir, [50 mg/kg twice daily (BID) for four consecutive days], did not reduce viral RNA load and infectious virus titres in the lung of infected animals, treatment resulted in a substantial improvement of SARS-CoV-2-induced lung pathology. This was accompanied by a dense infiltration of neutrophils in the lung interstitium which was similarly observed in non-infected hamsters. Nelfinavir resulted also in a marked increase in activated neutrophils in the blood, as observed in non-infected animals. Although Nelfinavir treatment did not alter the expression of chemoattractant receptors or adhesion molecules on human neutrophils, in vitro migration of human neutrophils to the major human neutrophil attractant CXCL8 was augmented by this protease inhibitor. Nelfinavir appears to induce an immunomodulatory effect associated with increasing neutrophil number and functionality, which may be linked to the marked improvement in SARS-CoV-2 lung pathology independent of its lack of antiviral activity. Since Nelfinavir is no longer used for the treatment of HIV, we studied the effect of two other HIV protease inhibitors, namely the combination Lopinavir/Ritonavir (Kaletra™) in this model. This combination resulted in a similar protective effect as Nelfinavir against SARS-CoV2 induced lung pathology in hamsters. ispartof: ANTIVIRAL RESEARCH vol:202 ispartof: location:Netherlands status: published
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- 2022
17. Development and optimisation of a high-throughput screening assay for in vitro anti–SARS-CoV-2 activity: evaluation of 5676 phase 1 passed structures
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Winston Chiu, Lore Verschueren, Christel Van den Eynde, Christophe Buyck, Sandra De Meyer, Dirk Jochmans, Denisa Bojkova, Sandra Ciesek, Jindrich Cinatl, Steven De Jonghe, Pieter Leyssen, Johan Neyts, Marnix Van Loock, and Ellen Van Damme
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Although vaccines are currently used to control the coronavirus disease 2019 (COVID-19) pandemic, treatment options are urgently needed for those who cannot be vaccinated and for future outbreaks involving new severe acute respiratory syndrome coronavirus virus 2 (SARS-CoV-2) strains or coronaviruses not covered by current vaccines. Thus far, few existing antivirals are known to be effective against SARS-CoV-2 and clinically successful against COVID-19.As part of an immediate response to the COVID-19 pandemic, a high-throughput, high content imaging–based SARS-CoV-2 infection assay was developed in VeroE6-eGFP cells and was used to screen a library of 5676 compounds that passed phase 1 clinical trials. Eight candidates (nelfinavir, RG-12915, itraconazole, chloroquine, hydroxychloroquine, sematilide, remdesivir, and doxorubicin) with in vitro anti–SARS-CoV-2 activity in VeroE6-eGFP and/or Caco-2 cell lines were identified. However, apart from remdesivir, toxicity and pharmacokinetic data did not support further clinical development of these compounds for COVID-19 treatment.
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- 2022
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18. Remdesivir, Molnupiravir and Nirmatrelvir remain active against SARS-CoV-2 Omicron and other variants of concern
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Laura Vangeel, Winston Chiu, Steven De Jonghe, Piet Maes, Bram Slechten, Joren Raymenants, Emmanuel André, Pieter Leyssen, Johan Neyts, and Dirk Jochmans
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Pharmacology ,Adenosine ,Alanine ,Lactams ,Proline ,SARS-CoV-2 ,Cytidine ,Microbial Sensitivity Tests ,Hydroxylamines ,RNA-Dependent RNA Polymerase ,Virus Replication ,Antiviral Agents ,Article ,Adenosine Monophosphate ,Cell Line ,COVID-19 Drug Treatment ,Leucine ,Virology ,Chlorocebus aethiops ,Nitriles ,Animals ,Humans ,Vero Cells ,Coronavirus 3C Proteases - Abstract
We assessed the in vitro antiviral activity of remdesivir and its parent nucleoside GS-441524, molnupiravir and its parent nucleoside EIDD-1931 and the viral protease inhibitor nirmatrelvir against the ancestral SARS-CoV2 strain and the five variants of concern including Omicron. VeroE6-GFP cells were pre-treated overnight with serial dilutions of the compounds before infection. The GFP signal was determined by high-content imaging on day 4 post-infection. All molecules have equipotent antiviral activity against the ancestral virus and the VOCs Alpha, Beta, Gamma, Delta and Omicron. These findings are in line with the observation that the target proteins of these antivirals (respectively the viral RNA dependent RNA polymerase and the viral main protease Mpro) are highly conserved. We assessed the in vitro antiviral activity of remdesivir and its parent nucleoside GS-441524, molnupiravir and its parent nucleoside EIDD-1931 and the viral protease inhibitor nirmatrelvir against the ancestral SARS-CoV2 strain and the five variants of concern including Omicron. VeroE6-GFP cells were pre-treated overnight with serial dilutions of the compounds before infection. The GFP signal was determined by high-content imaging on day 4 post-infection. All molecules have equipotent antiviral activity against the ancestral virus and the VOCs Alpha, Beta, Gamma, Delta and Omicron. These findings are in line with the observation that the target proteins of these antivirals (respectively the viral RNA dependent RNA polymerase and the viral main protease Mpro) are highly conserved. ispartof: Antiviral Research vol:198 ispartof: location:Netherlands status: published
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- 2022
19. Monitoring scheme for biotic habitat quality of Natura 2000 habitat types in Flanders, Belgium: Revision of the monitoring design
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Toon Westra, Kevin Scheers, Patrik Oosterlynck, Jo Packet, Jeroen Vanden Borre, An Leyssen, and Floris Vanderhaeghe
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- 2022
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20. Development of a robust and convenient dual-reporter high-throughput screening assay for SARS-CoV-2 antiviral drug discovery
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Winston Chiu, Joost Schepers, Thibault Francken, Laura Vangeel, Kayvan Abbasi, Dirk Jochmans, Steven De Jonghe, Hendrik Jan Thibaut, Volker Thiel, Johan Neyts, Manon Laporte, and Pieter Leyssen
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Pharmacology ,630 Agriculture ,Virology ,Assay development ,High-throughput screening ,Reporter SARS-CoV-2 ,Reporter A549 - Abstract
Massive efforts on both vaccine development and antiviral research were launched to combat the new severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). We contributed, amongst others, by the development of a high-throughput screening (HTS) antiviral assay against SARS-CoV-2 using a fully automated, high-containment robot system. Here, we describe the development of this novel, convenient and phenotypic dual-reporter virus-cell-based high-content imaging assay using the A549+hACE2+TMPRSS2_mCherry reporter lung carcinoma cell line and an ancestral SARS-CoV-2_Wuhan_mNeonGreen reporter virus. Briefly, by means of clonal selection, a host cell subclone was selected that (i) efficiently supports replication of the reporter virus with high expression, upon infection, of the NeonGreen fluorescent reporter protein, (ii) that is not affected by virus-induced cytopathogenic effects and, (iii) that expresses a strong fluorescent mCherry signal in the nucleus. The selected clone matched these criteria with an infection rate on average of 75% with limited cell death. The average (R)Z'-factors of the assay plates were all >0.8, which indicates a robust assay suitable for HTS purposes. A selection of reference compounds that inhibits SARS-CoV-2 replication in vitro were used to validate this novel dual-reporter assay and confirms the data reported in the literature. This assay is a convenient and powerful tool for HTS of large compound libraries against SARS-CoV-2. ispartof: ANTIVIRAL RESEARCH vol:210 ispartof: location:Netherlands status: published
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- 2022
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21. Watervlakken versie 1.2: Polygonenkaart van stilstaand water in Vlaanderen Uitgave 2022
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Kevin Scheers, Vincent Smeekens, Jo Packet, An Leyssen, and Carine Wils
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- 2022
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22. Synthesis, Structure–Activity Relationships, and Antiviral Profiling of 1-Heteroaryl-2-Alkoxyphenyl Analogs As Inhibitors of SARS-CoV-2 Replication
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Bardiot, Dorothée, Vangeel, Laura, Koukni, Mohamed, Arzel, Philippe, Zwaagstra, Marleen, Lyoo, Heyrhyoung, Wanningen, Patrick, Ahmad, Shamshad, Zhang, Linlin, Sun, Xinyuanyuan, Delpal, Adrien, Eydoux, Cecilia, Guillemot, Jean-Claude, Lescrinier, Eveline, Klaassen, Hugo, Leyssen, Pieter, Jochmans, Dirk, Castermans, Karolien, Hilgenfeld, Rolf, Robinson, Colin, Decroly, Etienne, Canard, Bruno, Snijder, Eric J, van Hemert, Martijn J, van Kuppeveld, Frank, Chaltin, Patrick, Neyts, Johan, De Jonghe, Steven, Marchand, Arnaud, Virologie, dI&I I&I-1, Sub RvdM overig, Virologie, dI&I I&I-1, Sub RvdM overig, Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Architecture et fonction des macromolécules biologiques (AFMB), and Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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1-heteroaryl-2-alkoxyphenyl analogs ,1 2 4-oxadiazole ,Pharmaceutical Science ,Organic chemistry ,Microbial Sensitivity Tests ,[CHIM.THER]Chemical Sciences/Medicinal Chemistry ,Virus Replication ,Antiviral Agents ,Analytical Chemistry ,Structure-Activity Relationship ,4-oxadiazole ,QD241-441 ,Heterocyclic Compounds ,COVID-19 ,SARS-CoV-2 ,1,2,4-oxadiazole ,Chlorocebus aethiops ,Drug Discovery ,Animals ,Physical and Theoretical Chemistry ,Vero Cells ,Organic Chemistry ,High-Throughput Screening Assays ,Chemistry (miscellaneous) ,Molecular Medicine - Abstract
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of COVID-19, has led to a pandemic, that continues to be a huge public health burden. Despite the availability of vaccines, there is still a need for small-molecule antiviral drugs. In an effort to identify novel and drug-like hit matter that can be used for subsequent hit-to-lead optimization campaigns, we conducted a high-throughput screening of a 160 K compound library against SARS-CoV-2, yielding a 1-heteroaryl-2-alkoxyphenyl analog as a promising hit. Antiviral profiling revealed this compound was active against various beta-coronaviruses and preliminary mode-of-action experiments demonstrated that it interfered with viral entry. A systematic structure-activity relationship (SAR) study demonstrated that a 3- or 4-pyridyl moiety on the oxadiazole moiety is optimal, whereas the oxadiazole can be replaced by various other heteroaromatic cycles. In addition, the alkoxy group tolerates some structural diversity. ispartof: MOLECULES vol:27 issue:3 ispartof: location:Switzerland status: published
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- 2022
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23. Publisher Correction: Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19
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Lennart Brewitz, David I. Stuart, Anthony Tumber, Petra Lukacik, Chris J Radoux, Laura Vangeel, Christopher J. Schofield, M.A. Redhead, Pieter Leyssen, David J. Hallett, Claire Strain-Damerell, Sean W. Robinson, Mitchell V. Hull, Jan Thibaut, Patrick Collins, Martin A. Walsh, Tika R. Malla, Mark Swindells, Alice Douangamath, Iva Navratilova Hopkins, Tu-Trinh Nguyen, Philipp Schäfer, Amelia H. Collette, C. David Owen, Thomas Vercruysse, D. Fearon, A.L. Hopkins, and Frank von Delft
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2019-20 coronavirus outbreak ,Multidisciplinary ,Coronavirus disease 2019 (COVID-19) ,business.industry ,Science ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Medicine ,business ,Virology - Published
- 2021
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24. Complete denture series part 2: tips on how to correct 10 avoidable errors
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A. Damien Walmsley, Wouter Leyssen, and Sivakumar Jayachandran
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Secondary care ,03 medical and health sciences ,0302 clinical medicine ,Series (mathematics) ,Referral ,business.industry ,medicine ,030212 general & internal medicine ,030206 dentistry ,Medical emergency ,medicine.disease ,business ,General Dentistry - Abstract
The first article of this series identified the common reasons for referral for complete denture patients to secondary care. With this background, this article provides general dental practitioners (GDPs) with clinical tips to avoid the common errors whilst making complete dentures. CPD/Clinical Relevance: The use of the clinical tips may help GDPs to improve their clinical success in treating complete denture patients and, in turn, aim to avoid improper referrals to secondary care.
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- 2019
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25. Complete denture series part 1: referrals for complete dentures – identifying the reasons
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A. Damien Walmsley, Wouter Leyssen, and Sivakumar Jayachandran
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Secondary care ,medicine.medical_specialty ,business.industry ,Family medicine ,medicine.medical_treatment ,medicine ,Dentures ,business ,General Dentistry ,Clinical record - Abstract
General dental practitioners (GDPs) continue to refer edentulous patients to secondary care for advice and treatment. The clinical records of edentulous patients referred to Birmingham Dental Hospital were reviewed to determine the common problems encountered by GDPs when constructing complete dentures. The main reasons for referral were resorption of the lower ridge (39%) followed by a series of ill-defined reasons (28%), looseness of either or both dentures (25%), pain (11%), immediate dentures (8%), exaggerated gag reflex (7%) and implants (7%). The reasons for referral do not always correspond to the clinical findings on the New Patient Assessment Clinics. CPD/Clinical Relevance: The findings of the article could be used as a guide for GDPs in identifying problems with problematic dentures.
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- 2019
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26. Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19
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M.A. Redhead, Patrick Collins, Tika R. Malla, Claire Strain-Damerell, Sean W. Robinson, Jan Thibaut, David I. Stuart, Anthony Tumber, Mark Swindells, C. David Owen, Philipp Schäfer, Chris J Radoux, Laura Vangeel, Frank von Delft, A.L. Hopkins, Mitchell V. Hull, Pieter Leyssen, Thomas Vercruysse, David J. Hallett, D. Fearon, Tu Trinh Nguyen, Martin A. Walsh, Alice Douangamath, Iva Navratilova Hopkins, Amelia H. Collette, Christopher J. Schofield, Lennart Brewitz, and Petra Lukacik
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0301 basic medicine ,Coronavirus disease 2019 (COVID-19) ,Science ,High-throughput screening ,medicine.medical_treatment ,Coronavirus Papain-Like Proteases ,medicine.disease_cause ,Antiviral Agents ,Article ,Cell Line ,Viral Proteins ,03 medical and health sciences ,SUBSTRATE ,0302 clinical medicine ,RESPIRATORY SYNDROME CORONAVIRUS ,INFLAMMATION ,medicine ,Humans ,Coronavirus 3C Proteases ,Serpins ,X-ray crystallography ,Coronavirus ,Science & Technology ,Multidisciplinary ,Protease ,SARS-CoV-2 ,M-PRO ,Drug discovery ,business.industry ,Drug Repositioning ,Publisher Correction ,Replication cycle ,Virology ,COVID-19 Drug Treatment ,Multidisciplinary Sciences ,Drug repositioning ,030104 developmental biology ,030220 oncology & carcinogenesis ,Enzyme mechanisms ,Medicine ,Science & Technology - Other Topics ,INDUCED DIMERIZATION ,INHIBITORS ,business ,Oligopeptides ,Clinical evaluation - Abstract
Effective agents to treat coronavirus infection are urgently required, not only to treat COVID-19, but to prepare for future outbreaks. Repurposed anti-virals such as remdesivir and human anti-inflammatories such as barcitinib have received emergency approval but their overall benefits remain unclear. Vaccines are the most promising prospect for COVID-19, but will need to be redeveloped for any future coronavirus outbreak. Protecting against future outbreaks requires the identification of targets that are conserved between coronavirus strains and amenable to drug discovery. Two such targets are the main protease (Mpro) and the papain-like protease (PLpro) which are essential for the coronavirus replication cycle. We describe the discovery of two non-antiviral therapeutic agents, the caspase-1 inhibitor SDZ 224015 and Tarloxotinib that target Mpro and PLpro, respectively. These were identified through extensive experimental screens of the drug repurposing ReFRAME library of 12,000 therapeutic agents. The caspase-1 inhibitor SDZ 224015, was found to be a potent irreversible inhibitor of Mpro (IC50 30 nM) while Tarloxotinib, a clinical stage epidermal growth factor receptor inhibitor, is a sub micromolar inhibitor of PLpro (IC50 300 nM, Ki 200 nM) and is the first reported PLpro inhibitor with drug-like properties. SDZ 224015 and Tarloxotinib have both undergone safety evaluation in humans and hence are candidates for COVID-19 clinical evaluation.
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- 2021
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27. Anticancer pan-ErbB inhibitors reduce inflammation and tissue injury and exert broad-spectrum antiviral effects
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Sirle Saul, Marwah Karim, Luca Ghita, Pei-Tzu Huang, Winston Chiu, Verónica Durán, Chieh-Wen Lo, Sathish Kumar, Nishank Bhalla, Pieter Leyssen, Farhang Alem, Niloufar A. Boghdeh, Do HN Tran, Courtney A. Cohen, Jacquelyn A. Brown, Kathleen E. Huie, Courtney Tindle, Mamdouh Sibai, Chengjin Ye, Ahmed Magdy Khalil, Luis Martinez-Sobrido, John M. Dye, Benjamin A. Pinsky, Pradipta Ghosh, Soumita Das, David E. Solow-Cordero, Jing Jin, John P. Wikswo, Dirk Jochmans, Johan Neyts, Steven De Jonghe, Aarthi Narayanan, and Shirit Einav
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MAPK/ERK pathway ,biology ,business.industry ,viruses ,Lung injury ,Lapatinib ,Receptor tyrosine kinase ,Drug repositioning ,ErbB ,Cancer research ,medicine ,biology.protein ,skin and connective tissue diseases ,business ,Protein kinase B ,PI3K/AKT/mTOR pathway ,medicine.drug - Abstract
Targeting host factors exploited by multiple viruses could offer broad-spectrum solutions for pandemic preparedness. Seventeen candidates targeting diverse functions emerged in a screen of 4,413 compounds for SARS-CoV-2 inhibitors. We demonstrated that lapatinib and other approved inhibitors of the ErbB family receptor tyrosine kinases suppress replication of SARS-CoV-2, Venezuelan equine encephalitis virus (VEEV), and other emerging viruses with a high barrier to resistance. Lapatinib suppressed SARS-CoV-2 entry and later stages of the viral life cycle and showed synergistic effect with the direct-acting antiviral nirmatrelvir. We discovered that ErbB1, 2 and 4 bind SARS-CoV-2 S1 protein and regulate viral and ACE2 internalization, and they are required for VEEV infection. In human lung organoids, lapatinib protected from SARS-CoV-2-induced activation of ErbB-regulated pathways implicated in non-infectious lung injury, pro-inflammatory cytokine production, and epithelial barrier injury. Lapatinib suppressed VEEV replication, cytokine production and disruption of the blood-brain barrier integrity in microfluidic-based human neurovascular units, and reduced mortality in a lethal infection murine model. We validated lapatinib-mediated inhibition of ErbB activity as an important mechanism of antiviral action. These findings reveal regulation of viral replication, inflammation, and tissue injury via ErbBs and establish a proof-of-principle for a repurposed, ErbB-targeted approach to combat emerging viruses.
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- 2021
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28. How to embrace big data and uncertainties within reasonable time constraints? A detailed flood study in Flanders
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J. Blanckaert, Fernando Pereira, Jiri Nossent, Tim Franken, Gert Leyssen, Els van Uytven, and Roeland Adams
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Flood myth ,business.industry ,Computer science ,Big data ,Environmental resource management ,business - Abstract
Progressing towards a sustainable society implies the availability of reliable boundary conditions for various hydrodynamic flood models, including an extensive consideration of uncertainties. With an ever growing availability of data and models, the uncertainty sources are constantly increasing. Hence, an elaborate uncertainty analysis strategy has become a must. One way to deal with part of this uncertainty is by applying an ensemble approach, using different hydrological models in combination with various climate scenarios. However, impact modellers may find the growing number and the increasing length of input series for hydraulic models more challenging, since computing time, reliability of the analysis and project deadlines can cause a conflicting situation. In this context, there is a need for approaches that offer a compromise between computing the vast amount of long input series and adequately addressing the uncertainties within a reasonable time span. We present an approach which reduces the computation time, but simultaneously recognises the importance of robust results and the consideration of the different sources of uncertainty. By a stratification of the probability domain for extreme events (discharges, water levels,…) a set of hydrodynamic boundary conditions is generated. Each of these synthetic events gets a probability of occurrence, which changes according to either the considered confidence level or the considered ensemble member. In addition to the stratification approach, a tool for selecting synthetic events for design is developed. This tool allows end-users to create a subset of synthetic events which can be used as design events for a specific area and are representative for the full set of events. The approach is demonstrated for the River Dender catchment in Flanders using 40 years of hydro-meteorological data, an ensemble of 3 hydrological models and a detailed hydraulic model.
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- 2021
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29. Nelfinavir markedly improves lung pathology in SARS-CoV-2-infected Syrian hamsters despite lack of an antiviral effect
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Valentijn Vergote, Joana Rocha-Pereira, Caroline S. Foo, Leen Delang, Raf Mols, Arnab K. Chatterjee, Suzanne J.F. Kaptein, Rana Abdelnabi, Patrick Augustijns, Pieter Annaert, Johan Neyts, Dirk Jochmans, Sebastiaan ter Horst, Kai Dallmeier, Lotte Coelmont, Steven De Jonghe, Laura Vangeel, Birgit Weynand, Xin Zhang, Pieter Leyssen, and Elisabeth Heylen
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Drug ,business.industry ,media_common.quotation_subject ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,virus diseases ,Hamster ,Context (language use) ,biochemical phenomena, metabolism, and nutrition ,medicine.disease ,Virology ,In vitro ,Nelfinavir ,medicine ,HIV Protease Inhibitor ,business ,Infiltration (medical) ,medicine.drug ,media_common - Abstract
In response to the ongoing COVID-19 pandemic, repurposing of drugs for the treatment of SARS-CoV-2 infections is being explored. The HIV protease inhibitor Nelfinavir, widely prescribed in combination with other HIV inhibitors, has been shown to inhibit in vitro SARS-CoV-2 replication. We here report on the effect of Nelfinavir in the Syrian hamster SARS-CoV-2 infection model. Although treatment of infected hamsters with either 15 or 50 mg/kg BID Nelfinavir [for four consecutive days, initiated on the day of infection] does not reduce viral RNA loads nor infectious virus titres in the lungs compared to the vehicle control, the drug reduced virus-induced lung pathology to nearly the baseline scores of healthy animals. A substantial interstitial infiltration of neutrophils is observed in the lungs of treated (both infected and uninfected) animals. The protective effect of Nelfinavir on SARS-CoV-2-induced lung pathology (at doses that are well tolerated and that result in exposures nearing those observed in HIV-infected patients) may lay the foundation for clinical studies with this widely used drug.
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- 2021
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30. A Highly Potent Antibody Effective Against SARS-CoV-2 Variants of Concern
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Giuseppe Pantaleo, Pieter Leyssen, Kelvin Lau, Marc Descatoire, Didier Trono, Jérémy Campos, Victor S. Joo, Céline Pellaton, Yves Levy, Florence Pojer, Erica Lana, Alex Farina, Mathilde Foglierini, Caroline S. Foo, Rana Abdelnabi, Roger LeGrand, Laura Vangeel, Priscilla Turelli, Laurent Perez, Flurin Fiscalini, Line Esteves-Leuenberger, Berend Jan Bosch, Volker Thiel, Wenjuan Du, Geertruida M. Veldman, Alessandra Noto, Charlène Raclot, Johan Neyts, Davide Demurtas, Craig Fenwick, Virologie, and dI&I I&I-1
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General Biochemistry, Genetics and Molecular Biology ,SARS-CoV-2 ,neutralizing antibodies ,variants of concern ,Antibodies, Viral ,Biochemistry ,Epitopes ,0302 clinical medicine ,Cricetinae ,CRYO-EM STRUCTURE ,SPIKE ,050207 economics ,validation ,Variants of concern ,0303 health sciences ,B-Lymphocytes ,050208 finance ,receptor-binding ,biology ,630 Agriculture ,Vaccination ,05 social sciences ,3. Good health ,Spike Glycoprotein, Coronavirus ,590 Animals (Zoology) ,Antibody ,Life Sciences & Biomedicine ,RECEPTOR-BINDING ,Protein Binding ,Combination therapy ,medicine.drug_class ,Hamster ,610 Medicine & health ,Monoclonal antibody ,VALIDATION ,Article ,Cell Line ,03 medical and health sciences ,Immunoglobulin Fab Fragments ,Structure-Activity Relationship ,Immunity ,Neutralization Tests ,0502 economics and business ,medicine ,Structure–activity relationship ,Animals ,Humans ,visualization ,human monoclonal-antibodies ,030304 developmental biology ,Science & Technology ,cryo-em structure ,Biochemistry, Genetics and Molecular Biology(all) ,HUMAN MONOCLONAL-ANTIBODIES ,COVID-19 ,spike ,Cell Biology ,Virology ,Antibodies, Neutralizing ,COVID-19 Drug Treatment ,Disease Models, Animal ,Cell culture ,biology.protein ,VISUALIZATION ,570 Life sciences ,030217 neurology & neurosurgery ,Broadly Neutralizing Antibodies ,Genetics and Molecular Biology(all) - Abstract
Control of the ongoing SARS-CoV-2 pandemic is endangered by the emergence of viral variants with increased transmission efficiency, resistance to marketed therapeutic antibodies and reduced sensitivity to vaccine-induced immunity. Here, we screen B cells from COVID-19 donors and identify P5C3, a highly potent and broadly neutralizing monoclonal antibody with picomolar neutralizing activity against all SARS-CoV-2 variants of concern (VOC) identified to date. Structural characterization of P5C3 Fab in complex with the Spike demonstrates a neutralizing activity defined by a large buried surface area, highly overlapping with the receptor-binding domain (RBD) surface necessary for ACE2 interaction. We further demonstrate that P5C3 shows complete prophylactic protection in the SARS-CoV-2 infected hamster challenge model. These results indicate that P5C3 opens exciting perspectives either as a prophylactic agent in immunocompromised individuals with poor response to vaccination or as combination therapy in SARS-CoV-2-infected individuals., Graphical Abstract, Fenwick et al. identify a highly potent anti-SAR-CoV-2 antibody that retains full activity against all variants of concern, demonstrates in vivo prophylactic protection in a hamster challenge model and could be used prophylactically as it has an extended in vivo half-life.
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- 2021
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31. The combined treatment of Molnupiravir and Favipiravir results in a marked potentiation of antiviral efficacy in a SARS-CoV-2 hamster infection model
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Rana Abdelnabi, Dirk Jochmans, Judith Breuer, Caroline S. Foo, Rachel Williams, Xin Zhang, Juanita Pang, Lana Langendries, Pieter Leyssen, Valentijn Vergote, Johan Neyts, Lotte Coelmont, Elisabeth Heylen, Kai Dallmeier, Steven De Jonghe, Birgit Weynand, Arnab K. Chatterjee, Suzanne J.F. Kaptein, and Laura Vangeel
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Lung ,Nucleoside analogue ,business.industry ,Hamster ,Pharmacology ,Favipiravir ,Titer ,medicine.anatomical_structure ,medicine ,Potency ,Mutation frequency ,business ,Viral load ,medicine.drug - Abstract
Favipiravir and Molnupiravir, orally available antivirals, have been reported to exert antiviral activity against SARS-CoV2. In recent days preliminary efficacy data have been reported in COVID-19 patients. We here studied the combined antiviral effect of the drugs in the SARS-CoV2 hamster infection model. We first demonstrate that Molnupiravir can reduce infectious virus titers in lungs of infected animals in a dose-dependent manner by up to 3.5 log10 which is associated with a marked improvement of virus-induced lung pathology. When animals are treated with a combination of suboptimal doses of Molnupiravir and Favipiravir (that each alone result in respectively a 1.3 log10 and 1.1 log10 reduction of infectious virus titers in the lungs), a marked combined potency is observed. Infectious virus titers in the lungs of animals treated with the combo are on average reduced by 4.5 log10 and infectious virus are no longer detected in the lungs of 60% of treated infected animals. Both drugs result in an increased mutation frequency of the remaining viral RNA recovered from the lungs. In the combo-treated hamsters an increased frequency of C-to-T and G-to-A mutations in the viral RNA is observed as compared to the single treatment groups which may explain the pronounced antiviral potency of the combination. Our findings may lay the basis for the design of clinical studies to test the efficacy of the combination of Molnupiravir and Favipiravir in the treatment of COVID-19.
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- 2020
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32. Freeze-like responses to pain in humans and its modulation by social context
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Kai Karos, Tine Leyssen, Ann Meulders, Johan W.S. Vlaeyen, RS: FPN CPS I, Section Experimental Health Psychology, RS-Research Line Clinical psychology (part of UHC program), and Department of Clinical Psychology
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medicine.medical_specialty ,Social threat ,IMPACT ,Heart rate ,Pain ,lcsh:Medicine ,Psychiatry and Psychology ,Fear conditioning ,Stimulus (physiology) ,Audiology ,Global Health ,Body sway ,INDIVIDUAL-DIFFERENCES ,050105 experimental psychology ,General Biochemistry, Genetics and Molecular Biology ,CHRONIC MUSCULOSKELETAL PAIN ,03 medical and health sciences ,Expectancy ,FEAR-AVOIDANCE MODEL ,0302 clinical medicine ,MOVEMENT-RELATED PAIN ,Freezing ,medicine ,FACIAL EXPRESSION ,0501 psychology and cognitive sciences ,Anesthesiology and Pain Management ,Expectancy theory ,Facial expression ,ACQUISITION ,General Neuroscience ,05 social sciences ,lcsh:R ,Chronic pain ,Social environment ,General Medicine ,Fear-avoidance model ,medicine.disease ,Freezing behavior ,EXTINCTION ,Pain expression ,THREATENING INFORMATION ,Public Health ,General Agricultural and Biological Sciences ,Psychology ,030217 neurology & neurosurgery ,BEHAVIOR ,Social context - Abstract
BackgroundMaladaptive defensive responses such as excessive avoidance behavior have received increasing attention as a main mechanism for the development and maintenance of chronic pain complaints. However, another defensive response which is commonly studied in animals as a proxy for fear is freezing behavior. No research to date has investigated human freezing behavior in the context of pain. In addition, there is an increasing realization that social context can affect pain-relevant processes such as pain experience and pain behavior but less is known about the effects of social context on defensive responses to pain. Hence, this study investigated freezing behavior and facial pain expression in the context of pain, and their modulation by social context.MethodsHealthy, pain-free participants (N = 39) stood on a stabilometric force platform in a threatening or safe social context, which was manipulated using angry or happy facial stimuli. In some trials, an auditory cue (conditioned stimulus; CS) predicted the occurrence of painful electrocutaneous stimulus (unconditioned stimulus; pain-US). We assessed body sway (an index of freezing), heart rate, facial pain expression, self-reported pain intensity, unpleasantness, and pain-US expectancy during the CS and the context alone (no CS).ResultsThe results were mixed. Neither the anticipation of pain, nor social context affected body sway. Heart rate and painful facial expression were reduced in the threatening social context at high anxiety levels. A threatening social context also elicited higher pain-US expectancy ratings. In sum, a threatening social context increases the expectation of pain, but reduces the facial expression of pain and lowers heart rate in highly anxious individuals.
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- 2020
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33. STAT2 signaling restricts viral dissemination but drives severe pneumonia in SARS-CoV-2 infected hamsters
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Robbert Boudewijns, Thomas Vercruysse, Xinyu Wang, Dominique Schols, Nico Callewaert, Greetje Vande Velde, Johan Van Weyenbergh, Pieter Leyssen, Piet Maes, Bert Schepens, Jelle Matthijnssens, Lindsey Bervoets, Birgit Weynand, Dirk Jochmans, Ghislain Opdenakker, Dorien De Vlieger, Lotte Coelmont, Veerle Compernolle, Kenny Roose, Joana Rocha-Pereira, Georg Schramm, Rong Li, Zhongde Wang, Johan Neyts, Valentijn Vergote, Carolien De Keyzer, Lanjiao Wang, Yanan Liu, Hendrik Jan Thibaut, Sander Jansen, Dominique Van Looveren, Tony Wawina-Bokalanga, Ji Ma, Joan Martí-Carreras, Tina Van Buyten, Sofie Jacobs, Laura Seldeslachts, Elisabeth Heylen, Xavier Saelens, Leen Delang, Lila Close, Sapna Sharma, Kai Dallmeier, Christopher Cawthorne, Koen Van Laere, Winston Chiu, Bert Vanmechelen, Marc Van Ranst, Laurens Liesenborghs, Suzanne J.F. Kaptein, and Erik Martens
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0301 basic medicine ,viruses ,PATHOGENESIS ,General Physics and Astronomy ,Virus Replication ,Pathogenesis ,Mice ,0302 clinical medicine ,RESPIRATORY SYNDROME CORONAVIRUS ,Interferon ,Cricetinae ,Medicine and Health Sciences ,MACROPHAGES ,lcsh:Science ,Lung ,Multidisciplinary ,I INTERFERON ,respiratory system ,3. Good health ,030220 oncology & carcinogenesis ,Interferon Type I ,medicine.symptom ,Pathogens ,Infection ,Coronavirus Infections ,medicine.drug ,Signal Transduction ,Science ,Pneumonia, Viral ,Inflammation ,Genetics and Molecular Biology ,macromolecular substances ,Lung injury ,Virus ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Betacoronavirus ,medicine ,Animals ,Permissive ,Pandemics ,SARS ,Innate immune system ,MODULAR APPROACH ,business.industry ,SARS-CoV-2 ,fungi ,COVID-19 ,STAT2 Transcription Factor ,General Chemistry ,Immunity, Innate ,respiratory tract diseases ,MODEL ,Disease Models, Animal ,SAMPLE PREPARATION PROCEDURES ,MICE ,030104 developmental biology ,Viral infection ,Immunology ,General Biochemistry ,lcsh:Q ,business ,Interferon type I - Abstract
Emergence of SARS-CoV-2 causing COVID-19 has resulted in hundreds of thousands of deaths. In search for key targets of effective therapeutics, robust animal models mimicking COVID-19 in humans are urgently needed. Here, we show that Syrian hamsters, in contrast to mice, are highly permissive to SARS-CoV-2 and develop bronchopneumonia and strong inflammatory responses in the lungs with neutrophil infiltration and edema, further confirmed as consolidations visualized by micro-CT alike in clinical practice. Moreover, we identify an exuberant innate immune response as key player in pathogenesis, in which STAT2 signaling plays a dual role, driving severe lung injury on the one hand, yet restricting systemic virus dissemination on the other. Our results reveal the importance of STAT2-dependent interferon responses in the pathogenesis and virus control during SARS-CoV-2 infection and may help rationalizing new strategies for the treatment of COVID-19 patients., SARS-CoV-2 infection can result in severe lung inflammation and pathology, but host response remains incompletely understood. Here the authors show in Syrian hamsters that STAT2 signaling restricts systemic virus dissemination but also drives severe lung injury, playing a dual role in SARS-CoV-2 infection.
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- 2020
34. In Vitro Activity of Itraconazole Against SARS-CoV-2
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Sandra De Meyer, Johan Neyts, Ellen Van Damme, Sandra Ciesek, Pieter Leyssen, Marnix Van Loock, Christophe Buyck, Steven De Jonghe, Jindrich Cinatl, Denisa Bojkova, and Dirk Jochmans
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Drug ,0303 health sciences ,030306 microbiology ,Itraconazole ,business.industry ,media_common.quotation_subject ,Pharmacology ,Prodrug ,In vitro ,3. Good health ,03 medical and health sciences ,Viral replication ,medicine ,MTT assay ,business ,Nucleoside ,030304 developmental biology ,medicine.drug ,EC50 ,media_common - Abstract
BackgroundAs long as there is no vaccine available, having access to inhibitors of SARS-CoV-2 will be of utmost importance. Antivirals against coronaviruses do not exist, hence global drug re-purposing efforts have been carried out to identify agents that may provide clinical benefit to patients with COVID-19. Itraconazole, an antifungal agent, has been reported to have potential activity against animal coronaviruses.MethodsUsing cell-based phenotypic assays, the in vitro antiviral activity of itraconazole and 17-OH itraconazole was assessed against clinical isolates from a German and Belgian patient infected with SARS-CoV-2.ResultsItraconazole demonstrated antiviral activity in human Caco-2 cells (EC50 = 2.3 μM; MTT assay). Similarly, its primary metabolite, 17-OH itraconazole, showed inhibition of SARS-CoV-2 activity (EC50 = 3.6 μM). Remdesivir inhibited viral replication with an EC50 = 0.4 μM. Itraconazole and 17-OH itraconazole resulted in a viral yield reduction in vitro of approximately 2-log10 and approximately 1-log10, as measured in both Caco-2 cells and VeroE6-eGFP cells, respectively. The viral yield reduction brought about by remdesivir or GS-441524 (parent nucleoside of the antiviral prodrug remdesivir; positive control) was more pronounced, with an approximately 3 log10 drop and >4 log10 drop in Caco-2 cells and VeroE6-eGFP cells, respectively.DiscussionItraconazole and 17-OH itraconazole exert in vitro low micromolar activity against SARS-CoV-2. Despite the in vitro antiviral activity, itraconazole did not result in a beneficial effect in hospitalized COVID-19 patients in a clinical study (EudraCT Number: 2020-001243-15).HighlightsItraconazole exerted in vitro low micromolar activity against SARS-CoV-2 (EC50 = 2.3 μM)Remdesivir demonstrated potent antiviral activity, confirming validity of the assayItraconazole has since shown no efficacy in a clinical study in hospitalized COVID-19 patients
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- 2020
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35. Vaccines based on replication incompetent Ad26 viral vectors: Standardized template with key considerations for a risk/benefit assessment
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Marc Gurwith, Eric Evans, Frank Tomaka, Hanneke Schuitemaker, Denny Kim, Maarten Leyssen, Richard C. Condit, James S. Robertson, Dirk Heerwegh, Jerome Custers, Macaya Douoguih, Esther Heijnen, Roy van Heesbeen, Georgi Shukarev, Robert T. Chen, and Emily R. Smith
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COVID-19 Vaccines ,030231 tropical medicine ,Genetic Vectors ,medicine.disease_cause ,Risk Assessment ,Article ,Viral vector ,03 medical and health sciences ,0302 clinical medicine ,Immunity ,medicine ,Animals ,Humans ,030212 general & internal medicine ,Vector (molecular biology) ,Neutralizing antibody ,Ebola virus ,General Veterinary ,General Immunology and Microbiology ,biology ,business.industry ,SARS-CoV-2 ,Immunogenicity ,Viral Vaccine ,Public Health, Environmental and Occupational Health ,COVID-19 ,Viral Vaccines ,Replication-incompetent Ad26 ,Ebolavirus ,Virology ,Clinical trial ,Infectious Diseases ,biology.protein ,Molecular Medicine ,Safety ,Benefit/risk ,business ,Vaccine - Abstract
Replication-incompetent adenoviral vectors have been under investigation as a platform to carry a variety of transgenes, and express various antigens as a basis for preventive or therapeutic vaccine development. A replication incompetent adenoviral vector based on human adenovirus type 26 (Ad26) has been evaluated in several clinical trials. The Brighton Collaboration Viral Vector Vaccines Safety Working Group (V3SWG) was formed to evaluate the safety and features of recombinant viral vector vaccines. This paper reviews the biological features of the Ad26 vectors, including tabulation of safety and risk assessment characteristics of Ad26 vector-based vaccines. Substantial information on immunogenicity, clinical safety, biological characteristics and manufacturing are reported. In the Ad26 vector, deletion of the E1 gene, rendering the vector replication incompetent and providing space for transgene insertion, is combined with additional genetic engineering for vaccine manufacturability and transgene expression optimization. These vaccines are manufactured using the E1-complementing PER.C6® cell line, a continuous, human cell-line that can be cultured in serum-free medium in a suspension to high cell densities, providing an effective and flexible system for high-yield manufacturing. Ad26 vector vaccines have favorable thermostability profiles, compatible with vaccine supply chains. Safety data are compiled in the Ad26 vaccine safety database version 4.0, with unblinded data from 23 ongoing and completed clinical studies for a total of 3912 participants in Ebola, HIV, Malaria, RSV and Filovirus Ad26-based vaccine programs. Overall, all Ad26-based vaccines have been well tolerated, with no significant safety issues identified from the available data in the current Ad26 vaccine safety database. Evaluation of Ad26-based vaccines to further characterize the safety profile is continuing, with more than 90,000 participants vaccinated as of 1st July 2020 (cut-off date). Extensive evaluation of immunogenicity in humans shows strong and durable humoral and cellular immune responses. Clinical trials have not shown meaningful impact of pre-existing immunity to Ad26 on vaccine immunogenicity, even in the presence of Ad26 neutralizing antibody titers or Ad26-targeting T cell responses at baseline. The first vaccine, against Ebola virus, that makes use of the Ad26 vector, received marketing authorization from EC on 1st July 2020, as part of the Ad26.ZEBOV, MVA BN Filo vaccine regimen. New developments based on the Ad26 vector are underway, including a COVID-19 vaccine, which is currently in clinical evaluation.
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- 2020
36. Intra-host emergence of an enterovirus A71 variant with enhanced PSGL1 usage and neurovirulence
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Sun, Liang, Tijsma, Aloys, Mirabelli, Carmen, Baggen, Jim, Wahedi, Maryam, Franco, David, De Palma, Armando, Leyssen, Pieter, Verbeken, Erik, van Kuppeveld, Frank J M, Neyts, Johan, Thibaut, Hendrik Jan, LS Virologie, dI&I I&I-1, LS Virologie, and dI&I I&I-1
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0301 basic medicine ,Epidemiology ,mouse model ,receptor ,Neurotropism ,030106 microbiology ,Immunology ,Mutation, Missense ,Mice, SCID ,Neuropathology ,Biology ,SCID ,Microbiology ,Article ,Pathogenesis ,Mice ,03 medical and health sciences ,Viral entry ,Virology ,Drug Discovery ,Enterovirus Infections ,Paralysis ,medicine ,Animals ,Humans ,Tropism ,Neurons ,Membrane Glycoproteins ,Virulence ,tropism ,pathogenesis ,General Medicine ,Virus Internalization ,Enterovirus A, Human ,3. Good health ,Viral Tropism ,enterovirus A71 ,030104 developmental biology ,Infectious Diseases ,Viral replication ,Host-Pathogen Interactions ,Tissue tropism ,Capsid Proteins ,Parasitology ,CNS ,medicine.symptom - Abstract
Enterovirus A71 (EV-A71) is one of the main causative agents of hand-foot-and-mouth disease and is occasionally associated with severe neurological complications. EV-A71 pathophysiology is poorly understood due to the lack of small animal models that robustly support viral replication in relevant organs/tissues. Here, we show that adult severe combined immune-deficient (SCID) mice can serve as an EV-A71 infection model to study neurotropic determinants and viral tropism. Mice inoculated intraperitoneally with an EV-A71 clinical isolate had an initial infection of the lung compartment, followed by neuroinvasion and infection of (motor)neurons, resulting in slowly progressing paralysis of the limbs. We identified a substitution (V135I) in the capsid protein VP2 as a key requirement for neurotropism. This substitution was also present in a mouse-adapted variant, obtained by passaging the clinical isolate in the brain of one-day-old mice, and induced exclusive neuropathology and rapid paralysis, confirming its role in neurotropism. Finally, we showed that this residue enhances the capacity of EV-A71 to use mouse PSGL1 for viral entry. Our data reveal that EV-A71 initially disseminates to the lung and identify viral and host determinants that define the neurotropic character of EV-A71, pointing to a hitherto understudied role of PSGL1 in EV-A71 tropism and neuropathology. ispartof: EMERGING MICROBES & INFECTIONS vol:8 issue:1 pages:1076-1085 ispartof: location:United States status: published
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- 2019
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37. α-Ketoamides as Broad-Spectrum Inhibitors of Coronavirus and Enterovirus Replication: Structure-Based Design, Synthesis, and Activity Assessment
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Pieter Leyssen, Adriaan H. de Wilde, Jiang Wang, Albrecht von Brunn, Eric J. Snijder, Daizong Lin, Hong Liu, Johan Neyts, Linlin Zhang, Yuri Kusov, Qingjun Ma, Kristina Lanko, Yong Nian, and Rolf Hilgenfeld
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3C-LIKE PROTEASES ,Peptidomimetic ,CYCLOSPORINE-A ,medicine.medical_treatment ,viruses ,Chemistry, Medicinal ,Viral Nonstructural Proteins ,medicine.disease_cause ,Crystallography, X-Ray ,Virus Replication ,MOUTH-DISEASE ,01 natural sciences ,Chlorocebus aethiops ,Drug Discovery ,Pharmacology & Pharmacy ,Coronavirus 3C Proteases ,Coronavirus ,Enterovirus ,0303 health sciences ,Chemistry ,3C PROTEASE ,3C Viral Proteases ,3. Good health ,POTENT INHIBITION ,Cysteine Endopeptidases ,VIRUS ,Molecular Medicine ,Life Sciences & Biomedicine ,Protein Binding ,Proteases ,Lactams ,HAND ,Antiviral Agents ,Virus ,Article ,MAIN PROTEINASE ,03 medical and health sciences ,Viral Proteins ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Protease Inhibitors ,Vero Cells ,030304 developmental biology ,SARS ,Protease ,Binding Sites ,Science & Technology ,M-PRO ,Virology ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Viral replication ,Drug Design ,Vero cell ,Peptidomimetics - Abstract
The main protease of coronaviruses and the 3C protease of enteroviruses share a similar active-site architecture and a unique requirement for glutamine in the P1 position of the substrate. Because of their unique specificity and essential role in viral polyprotein processing, these proteases are suitable targets for the development of antiviral drugs. In order to obtain near-equipotent, broad-spectrum antivirals against alphacoronaviruses, betacoronaviruses, and enteroviruses, we pursued a structure-based design of peptidomimetic α-ketoamides as inhibitors of main and 3C proteases. Six crystal structures of protease-inhibitor complexes were determined as part of this study. Compounds synthesized were tested against the recombinant proteases as well as in viral replicons and virus-infected cell cultures; most of them were not cell-toxic. Optimization of the P2 substituent of the α-ketoamides proved crucial for achieving near-equipotency against the three virus genera. The best near-equipotent inhibitors, 11u (P2 = cyclopentylmethyl) and 11r (P2 = cyclohexylmethyl), display low-micromolar EC50 values against enteroviruses, alphacoronaviruses, and betacoronaviruses in cell cultures. In Huh7 cells, 11r exhibits three-digit picomolar activity against the Middle East Respiratory Syndrome coronavirus. ispartof: JOURNAL OF MEDICINAL CHEMISTRY vol:63 issue:9 pages:4562-4578 ispartof: location:United States status: published
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- 2020
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38. Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication
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Rolf Hilgenfeld, Daizong Lin, Hong Liu, Yong Nian, Eric J. Snijder, Adriaan H. de Wilde, Johan Neyts, Qingjun Ma, Jiang Wang, Albrecht von Brunn, Pieter Leyssen, Linlin Zhang, Yuri Kusov, and Kristina Lanko
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0303 health sciences ,Proteases ,Protease ,030306 microbiology ,Chemistry ,Peptidomimetic ,Middle East respiratory syndrome coronavirus ,viruses ,medicine.medical_treatment ,medicine.disease_cause ,Virology ,Virus ,3. Good health ,law.invention ,03 medical and health sciences ,law ,medicine ,Recombinant DNA ,Enterovirus ,030304 developmental biology ,Coronavirus - Abstract
The main protease of coronaviruses and the 3C protease of enteroviruses share a similar active-site architecture and a unique requirement for glutamine in the P1 position of the substrate. Because of their unique specificity and essential role in viral polyprotein processing, these proteases are suitable targets for the development of antiviral drugs. In order to obtain near-equipotent, broad-spectrum antivirals against alphacoronaviruses, betacoronaviruses, and enteroviruses, we pursued structure-based design of peptidomimetic α-ketoamides as inhibitors of main and 3C proteases. Six crystal structures of protease:inhibitor complexes were determined as part of this study. Compounds synthesized were tested against the recombinant proteases as well as in viral replicons and virus-infected cell cultures; most of them were not cell-toxic. Optimization of the P2 substituent of the α-ketoamides proved crucial for achieving near-equipotency against the three virus genera. The best near-equipotent inhibitors, 11u (P2 = cyclopentylmethyl) and 11r (P2 = cyclohexylmethyl), display low-micromolar EC50 values against enteroviruses, alphacoronaviruses, and betacoronaviruses in cell cultures. In Huh7 cells, 11r exhibits three-digit picomolar activity against Middle East Respiratory Syndrome coronavirus.
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- 2020
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39. Antiplasmodial, anti-chikungunya virus and antioxidant activities of 64 endemic plants from the Mascarene Islands
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Emmanuelle Girard-Valenciennes, Martine Cao, Lúcia Cristina Coelho Cristino Mamede, Pierre-Eric Campos, Pieter Leyssen, Jacqueline Smadja, Michel Frederich, Olivia Jansen, Thomas Hermann, Bertrand Payet, Marc Litaudon, Charlotte Vanderheydt, Isabelle Grondin, Leen Delang, Allison Ledoux, Patricia Clerc, Johan Neyts, Laboratoire de pharmacognosie, Université de Liège, Laboratoire de Chimie des Substances Naturelles et des Sciences des Aliments (LCSNSA), Université de La Réunion (UR), Parc national de La Réunion, Institut de Chimie des Substances Naturelles (ICSN), Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC), Rega Institute for Medical Research [Leuven, België], and Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven)
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0301 basic medicine ,Microbiology (medical) ,Plasmodium ,Population ,Microbial Sensitivity Tests ,Bertiera ,Antiviral Agents ,Ferric Compounds ,Antiplasmodial ,Antioxidants ,Zanthoxylum heterophyllum ,Antimalarials ,Inhibitory Concentration 50 ,03 medical and health sciences ,Parasitic Sensitivity Tests ,[CHIM]Chemical Sciences ,Pharmacology (medical) ,Benzothiazoles ,education ,Endemism ,education.field_of_study ,Oxygen Radical Absorbance Capacity ,biology ,Traditional medicine ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,Plant Extracts ,Terminalia ,General Medicine ,Plants ,Aphloia ,biology.organism_classification ,Malaria ,030104 developmental biology ,Infectious Diseases ,Poupartia borbonica ,Antioxidant ,Sulfonic Acids ,Chikungunya virus ,Oxidation-Reduction ,Reunion ,Scolopia - Abstract
Vector-borne diseases cause more than 1 million deaths annually. The research into new medicines is urgent, especially as there is currently no specific treatment. In this study, the authors have selected 64 endemic plants from the Mascarene Islands based on their endemism, their medicinal use and their registration in the French Pharmacopeia to evaluate the antiplasmodial, anti-chikungunya and antioxidant activities. The list of these 64 plants including their local name, population, data of collection and voucher number are available in the Supporting Information. Forty active extracts were identified from the 38 species: 22 responded positively to the antiplasmodial activity, 8 to the anti-chikungunya activity and 8 to the antioxidant activity. Six plants demonstrated high antiplasmodial activity (concentration inhibiting 50% of parasitic growth (IC50) 2000 µM of Trolox equivalent per mg/mL of extract: Bertiera borbonica, Erythroxylon laurifolium, Erythroxylon sideroxyloides, I. ammoxylum, P. borbonica, Scolopia heterophylla, Sophora denudata, and Terminalia bentzoe. Some data obtained tend to corroborate the reported traditional use of the plant, such as Z. heterophyllum (antiplasmodial), A. theiformis (anti-chikungunya), and E. laurifolium (antioxidant). ispartof: INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS vol:52 issue:5 pages:622-628 ispartof: location:Netherlands status: published
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- 2018
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40. A reassessment of mycophenolic acid as a lead compound for the development of inhibitors of chikungunya virus replication
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Paul A. Keller, Johan Neyts, Adel A. Rashad, and Pieter Leyssen
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0301 basic medicine ,010405 organic chemistry ,Organic Chemistry ,medicine.disease_cause ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Mycophenolic acid ,Virus ,0104 chemical sciences ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,Viral replication ,Drug Discovery ,medicine ,Chikungunya ,Lead compound ,medicine.drug - Abstract
Mycophenolic acid (MPA) has been previously reported as an inhibitor of the chikugunya virus (CHIKV) with an EC50 value of 0.2 μM. We used MPA as a lead compound designing and synthesizing a series of isatins and benzolactones in a typical medicinal chemistry program. The synthesis and testing of 19 derivatives produced compounds with no desired activity which prompted us to retest the lead compound, MPA. We can reveal that MPA shows no anti-CHIKV activity and therefore needs to be reassessed as a lead compound for this target.
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- 2018
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41. Broad spectrum anti-coronavirus activity of a series of anti-malaria quinoline analogues
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Pieter Leyssen, Xinyu Wang, Johan Neyts, Dominique Schols, Leentje Persoons, Shi-Yan Caroline Foo, Nguyen Dan Thuc Do, Dirk Jochmans, Steven De Jonghe, Evelien Vanderlinden, and Laura Vangeel
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Primaquine ,Tafenoquine ,viruses ,Quinoline ,Amodiaquine ,Pharmacology ,Virus Replication ,medicine.disease_cause ,Antiviral Agents ,Article ,Coronavirus OC43, Human ,Antimalarials ,chemistry.chemical_compound ,Coronavirus 229E, Human ,Chloroquine ,Virology ,Chlorocebus aethiops ,medicine ,Animals ,Humans ,Antiviral ,Vero Cells ,Coronavirus ,Quinine ,SARS-CoV-2 ,Chemistry ,Mefloquine ,COVID-19 ,virus diseases ,Hydroxychloroquine ,Virus Internalization ,COVID-19 Drug Treatment ,Quinolines ,Coronavirus Infections ,medicine.drug - Abstract
In this study, a series of 10 quinoline analogues was evaluated for their in vitro antiviral activity against a panel of alpha- and beta-coronaviruses, including the severe acute respiratory syndrome coronaviruses 1 and 2 (SARS-CoV-1 and SARS-CoV-2), as well as the human coronaviruses (HCoV) 229E and OC43. Chloroquine and hydroxychloroquine were the most potent with antiviral EC50 values in the range of 0.12–12 μM. Chloroquine displayed the most favorable selectivity index (i.e. ratio cytotoxic versus antiviral concentration), being 165 for HCoV-OC43 in HEL cells. Potent anti-coronavirus activity was also observed with amodiaquine, ferroquine and mefloquine, although this was associated with substantial cytotoxicity for mefloquine. Primaquine, quinidine, quinine and tafenoquine only blocked coronavirus replication at higher concentrations, while piperaquine completely lacked antiviral and cytotoxic effects. A time-of-addition experiment in HCoV-229E-infected HEL cells revealed that chloroquine interferes with viral entry at a post-attachment stage. Using confocal microscopy, no viral RNA synthesis could be detected upon treatment of SARS-CoV-2-infected cells with chloroquine. The inhibition of SARS-CoV-2 replication by chloroquine and hydroxychloroquine coincided with an inhibitory effect on the autophagy pathway as visualized by a dose-dependent increase in LC3-positive puncta. The latter effect was less pronounced or even absent with the other quinolines. In summary, we showed that several quinoline analogues, including chloroquine, hydroxychloroquine, amodiaquine, ferroquine and mefloquine, exhibit broad anti-coronavirus activity in vitro.
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- 2021
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42. In silico development of a novel putative inhibitor of the 3C protease of Coxsackievirus B3 with a benzene sulfonamide skeleton
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Pieter Leyssen, Syed Hussain Basha, Venkatesan Jayaprakash, Rana Abdelnabi, Ajay Kumar Timiri, Barij Nayan Sinha, and Johan Neyts
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chemistry.chemical_classification ,Virtual screening ,biology ,In silico ,virus diseases ,Coxsackievirus ,biology.organism_classification ,Molecular biology ,Sulfonamide ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Coxsackievirus b3 ,3c protease ,Derivative (chemistry) ,EC50 - Abstract
Availability of X-ray crystal structure of 3C protease of several enteroviruses provided an opportunity for in silico drug design and development approach. Presented study is aimed at designing a novel compound targeting 3C protease of Coxsackievirus (CVB3), which is reported frequently to cause myocarditis in North America and Europe. A pthalimido-sulfonamide derivative (ZINC13799063) was identified through high-throughput virtual screening (HTVS) approach from the top HITs. A small library of phalimido-sulphonamides was enumerated to find a potential LEAD. Compound 17 from the library was found to inhibit CVB3 selectively in cell based antiviral assay at a concentration of EC50=1.0±0.1 µM with a selectivity index of >140. Molecular dynamics study was performed to investigate the selective inhibition of CVB3 over CVB4.
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- 2017
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43. Lot-to-lot consistency, safety and immunogenicity of 3 lots of Haemophilus influenzae type b conjugate vaccine: results from a phase III randomized, multicenter study in infants
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Yaela Baine, Nicola P. Klein, Leonard B. Weiner, Matthew Cornish, Brigitte Cheuvart, Michael Leonardi, Maarten Leyssen, Sumita Roy-Ghanta, Narcisa Mesaros, Stanley E. Grogg, Peter E. Silas, Jacqueline M. Miller, Robert W. Frenck, Remon Abu-Elyazeed, and Meera Varman
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Male ,Pediatrics ,medicine.medical_specialty ,Haemophilus Infections ,health care facilities, manpower, and services ,Immunization, Secondary ,medicine.disease_cause ,complex mixtures ,Haemophilus influenzae ,03 medical and health sciences ,Immunogenicity, Vaccine ,0302 clinical medicine ,Conjugate vaccine ,030225 pediatrics ,Tetanus Toxoid ,medicine ,Humans ,030212 general & internal medicine ,Adverse effect ,Bacterial Capsules ,Immunization Schedule ,Haemophilus Vaccines ,Vaccines, Conjugate ,General Veterinary ,General Immunology and Microbiology ,Tetanus ,business.industry ,Immunogenicity ,Haemophilus influenzae type b ,Public Health, Environmental and Occupational Health ,Infant ,bacterial infections and mycoses ,medicine.disease ,Antibodies, Bacterial ,United States ,Vaccination ,Infectious Diseases ,Immunization ,Hib vaccine ,bacteria ,Molecular Medicine ,Female ,business - Abstract
Background Vaccination against Haemophilus influenzae type b (Hib) is included in routine pediatric immunization schedule in the United States. Previous vaccine shortages have created the need for additional options for Hib vaccination. Methods This phase III, randomized, multi-centered study ( NCT01000974 ) evaluated the safety and immunogenicity of a monovalent tetanus toxoid-conjugate Hib vaccine (Hib-TT) compared to a monovalent (Hib-TT control) and a combination Hib-TT vaccine. We hierarchically assessed lot-to-lot consistency of 3 Hib-TT lots and non-inferiority of Hib-TT to Hib-TT control. We co-administered routine pediatric vaccines with Hib-TT vaccines at 2, 4, 6 months (primary vaccination) and 15–18 months of age (booster vaccination). We recorded adverse events (AEs) for 4 (solicited) and 31 days (unsolicited) post-vaccination and serious AEs (SAEs) throughout the study. Results Of 4009 enrolled children, 3086 completed booster phase. Lot-to-lot consistency was not demonstrated. The study met statistical criteria for non-inferiority of Hib-TT to Hib-TT control in terms of immune responses to Hib and co-administered vaccines’ antigens, but not in terms of participants achieving post-primary vaccination anti-PRP levels ≥1 µg/mL. Because of the hierarchical nature of the objectives, non-inferiority could not be established. In all groups, 92.5–96.7% and 99.6–100% of participants achieved anti-PRP levels ≥0.15 µg/mL, while 78.3–89.8% and 97.9–99.1% had anti-PRP levels ≥1 µg/mL, post-primary and post-booster vaccination, respectively. Immune responses to co-administered vaccines and reported incidence of AEs were comparable among groups. We recorded SAEs for 107/2963 (3.6%), 24/520 (4.6%), and 21/520 (4.0%) children post-primary vaccination, and 29/2337 (1.2%), 4/435 (0.9%), and 2/400 (0.5%) children post-booster vaccination with Hib-TT, Hib-TT control and combination Hib-TT vaccine, respectively; 6/5330 (0.1%) SAEs in the Hib-TT groups were considered vaccine-related. Conclusion Hib-TT induced seroprotective antibody concentrations in the majority of participants and was well-tolerated when co-administered with routine pediatric vaccines according to a 3 + 1 schedule.
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- 2017
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44. Watervlakken versie 1.1: polygonenkaart van stilstaand water in Vlaanderen: uitgave 2020
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Jo Packet, Geert De Knijf, Vincent Smeekens, Carine Wils, An Leyssen, Kevin Scheers, and Luc Denys
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- 2020
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45. Gunstige abiotische bereiken voor vegetatietypes in Vlaanderen
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Hans Van Calster, Luc Denys, Luc De Keersmaeker, Nathalie Cools, Cécile Herr, An Leyssen, Bart Vandevoorde, Sam Provoost, Maud Raman, Jan Wouters, and Floris Vanderhaeghe
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- 2020
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46. Criteria voor de beoordeling van de lokale staat van instandhouding van de Natura2000 habitattypen in Vlaanderen
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Bart Vandevoorde, An Leyssen, Steven De Saeger, Arno Thomaes, Jan Wouters, Patrik Oosterlynck, Desiré Paelinckx, and Sam Provoost
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- 2020
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47. Indicatieve situering van het Natura 2000 habitattype 3260
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An Leyssen and Vincent Smeekens
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- 2020
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48. Leidraad voor het beheer van watercrassula - Crassula helmsii - in Vlaanderen
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Jo Packet, Tim Adriaens, Vincent Smeekens, An Leyssen, Luc Denys, Kevin Scheers, and Geert De Knijf
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- 2020
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49. Technique tips
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D.C. Attrill, Kasim Butt, and Wouter Leyssen
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Orthodontics ,03 medical and health sciences ,0302 clinical medicine ,Computer science ,030206 dentistry ,Bite block ,General Dentistry ,030217 neurology & neurosurgery - Published
- 2018
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50. A novel class of small molecule inhibitors targeting the chikungunya virus capping machinery with a high barrier to resistance
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Thierry Langer, Bruno Coutard, Martijn J. van Hemert, Gilles Querat, Gerhard Puerstinger, Johan Neyts, Arnaud Marchand, Leen Delang, Patrick Chaltin, Pieter Leyssen, Kristina Kovacikova, Julia Kirchebner, and Rana Abdelnabi
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Chemistry ,medicine ,General Materials Science ,Chikungunya ,medicine.disease_cause ,Virology ,Small molecule ,Virus - Published
- 2019
- Full Text
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