230 results on '"Kyung-Hoon, Shin"'
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2. Geochemical and microbial characteristics of authigenic carbonates from the Chukchi Borderlands in the western Arctic Ocean
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Jung-Hyun Kim, Dong-Hun Lee, Yung Mi Lee, Germain Bayon, Dahae Kim, Young Jin Joe, Xudong Wang, Kyung-Hoon Shin, and Young Keun Jin
- Abstract
Migration of methane-rich fluids at submarine cold seeps drives intense microbial activity and precipitation of authigenic carbonates. In this study, we investigated authigenic carbonate samples taken from active gas hydrate mounds on the southwestern slope of the Chukchi Borderlands (CB), western Arctic Ocean. Our main objectives were to characterize the distribution patterns of trace elements in carbonate-hosted lipid fractions and to assess metalloenzyme requirements of microbes involved in anaerobic oxidation of methane (AOM). We measured stable isotopes, trace elements, lipid biomarkers, and genomic DNA. Our results indicate the dominance of AOM-related lipid biomarkers in studied carbonate samples, as well as a predominant occurrence of the anaerobic methanotrophic archaea (ANME)-1. We also report evidence for significant preferential enrichments of various trace elements (Li, Ni, Co, Cu, Zn, and Mo) in the total lipid fractions of CB carbonates, relative to elemental compositions determined for corresponding carbonate fractions, which differ from those previously reported for other seep sites. We hypothesize that trace element enrichments in carbonate-hosted lipid fractions could vary depending on the type of AOM microbial assemblage.
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- 2023
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3. Comparison of Microscopy and Pigment Analysis for Determination of Phytoplankton Community Composition: Application of CHEMTAX Program
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Dokyun Kim, Jisoo Choi, Hye-Ji Oh, Kwang-Hyeon Chang, Kwangsoon Choi, and Kyung-Hoon Shin
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- 2021
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4. A Study on the Dynamics of Dissolved Organic Matter Associated with Ambient Biophysicochemical Factors in the Sediment Control Dam (Lake Youngju)
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Hye-Ji Oh, Dokyun Kim, Jisoo Choi, Yeon-Ji Chae, Jong Min Oh, Kyung-Hoon Shin, Kwangsoon Choi, Dong-Kyun Kim, and Kwang-Hyeon Chang
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- 2021
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5. Marine Surfactants
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Se-Kwon Kim and Kyung-Hoon Shin
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- 2022
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6. Microbial alteration in marine sediments: Insights from compound-specific isotopic compositions of amino acids in subseafloor environments
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Hyuntae Choi, Bohyung Choi, Yoshito Chikaraishi, Yoshinori Takano, Haryun Kim, Kitack Lee, Dhongil Lim, and Kyung-Hoon Shin
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Global and Planetary Change ,Ocean Engineering ,Aquatic Science ,Oceanography ,Water Science and Technology - Abstract
The proportion of amino acids (AAs) in sediment can be used as an indicator of microbial degradation, which is primarily the product of benthic prokaryote activity. The microbial activity would be reflected with the stable isotope ratio of nitrogen (δ15N) at the time of mineralization and resynthesis of AAs. In this study, the compound-specific isotope analysis of individual AAs was used to investigate δ15N variation associated with microbial processes in marine sediment samples. Our results showed a decrease in AA concentrations in core-top sediment was accompanied by an increase in δ15N values, suggesting large 15N enrichment in buried AAs. Phenylalanine displayed an increase in δ15N from the surface to depths greater than 2 cm, whereas relatively constant δ15N values at depths below 2 cm, suggesting that microbial utilization of phenylalanine varies with depth. Glycine showed the highest relative molar contribution (from 12.1 to 36.4%), with the largest δ15N increase (from 0.8 to 8.7) in deep sediment, implying that such information can serve as a measure of AA diagenesis in sedimentary environments. Our results also indicated that the δ15N values of individual AAs in sediment reflected the microbial alteration of organic matter at water-sediment interfaces and in sub-surface environments. These findings form an important basis for interpreting the δ15N values of AAs in sediment.
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- 2022
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7. Metalloenzyme signatures in authigenic carbonates from the Chukchi Borderlands in the western Arctic Ocean
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Dong-Hun Lee, Jung-Hyun Kim, Yung Mi Lee, Germain Bayon, Dahae Kim, Young Jin Joe, Xudong Wang, Kyung-Hoon Shin, and Young Keun Jin
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Geologic Sediments ,Multidisciplinary ,Oceans and Seas ,Metalloproteins ,Carbonates ,Anaerobiosis ,Archaea ,Lipids ,Methane ,Oxidation-Reduction ,Biomarkers ,Phylogeny ,Trace Elements - Abstract
Migration of methane-rich fluids at submarine cold seeps drives intense microbial activity and precipitation of authigenic carbonates. In this study, we analyzed microbially derived authigenic carbonate samples recently recovered from active gas hydrate mounds on the southwestern slope of the Chukchi Borderlands (CB), western Arctic Ocean. Our main aim was to characterize the distribution patterns of trace elements in carbonate-hosted lipid fractions to assess metalloenzyme requirements of microbes involved in anaerobic oxidation of methane (AOM). We measured stable isotopes, trace elements, lipid biomarkers, and genomic DNA, and results indicate the dominance of AOM-related lipid biomarkers in studied carbonate samples, as well as a predominant occurrence of the anaerobic methanotrophic archaea (ANME)-1. We also report evidence for significant preferential enrichments of various trace elements (Li, Ni, Co, Cu, Zn, and Mo) in the total lipid fractions of CB carbonates, relative to elemental compositions determined for corresponding carbonate fractions, which differ from those previously reported for other seep sites. We hypothesize that trace element enrichments in carbonate-hosted lipid fractions could vary depending on the type of AOM microbial assemblage. Additional work is required to further investigate the mechanisms of lipid-bound trace elements in cold seep carbonates as potential metalloenzymes in AOM.
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- 2022
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8. Basin-specific pollution and impoundment effects on greenhouse gas distributions in three rivers and estuaries
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Ji-Hyung Park, Hyunji Lee, Maidina Zhumabieke, Seung-Hee Kim, Kyung-Hoon Shin, and Boo-Keun Khim
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Environmental Engineering ,Ecological Modeling ,Pollution ,Waste Management and Disposal ,Water Science and Technology ,Civil and Structural Engineering - Published
- 2023
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9. Application of Column Chromatography for Accurate Determination of the Carbon Isotopic Compositions of n-alkanes in Diverse Environmental Samples
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Jung-Hyun Kim, Dong-Hun Lee, and Kyung-Hoon Shin
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chemistry.chemical_classification ,N alkanes ,Column chromatography ,Chromatography ,chemistry ,Elution ,chemistry.chemical_element ,Silica column ,Organic matter ,Oceanography ,Mass spectrometry ,Carbon ,Isotope analysis - Abstract
The carbon isotopic compositions (δ13C) of n-alkanes in various environmental samples have been previously proposed as suitable fingerprints for assessing the origin of organic matter (OM) in diverse environmental systems. However, with respect to using gas chromatography–combustion–isotope ratio mass spectrometry for the carbon isotopic analysis of n-alkanes, analytical uncertainty may often be caused by the co-elution of interfering unsaturated compounds (e.g., aromatic and branched compounds). Hence, we propose a simple but reliable method for purification that uses column chromatography. The performance of two different solid stationary phases (i.e., aluminum oxide and Ag+-impregnated silica) was compared in terms of their capacity to eliminate unsaturated compounds from total hydrocarbons and thus increase the precision of δ13C measurements. Compared to the use of an activated aluminum oxide column, elution from an Ag+-impregnated silica column allows more effective isolation of individual n-alkanes, which results in more precise δ13C measurements for diverse environmental samples. Thus, Ag+-impregnated silica column separation can be effective as a routine experimental technique for increasing the accuracy of the δ13C values for n-alkanes in OM, which includes a large proportion of unsaturated compounds.
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- 2021
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10. Evaluation of Food Web Structure and Complexity in the Process of Kelp Bed Recovery Using Stable Isotope Analysis
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Moon Jung Kim, Hee Young Yun, Kyung-Hoon Shin, and Jeong Ha Kim
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Global and Planetary Change ,Ocean Engineering ,Aquatic Science ,Oceanography ,Water Science and Technology - Abstract
Kelp forests have declined gradually all over the world. Understanding the trophic structure of such a productive and diverse ecosystem is crucial for its restoration and effective management. Few studies, however, have focused on the trophic structure and functional recovery of kelp forests in the process of restoration. This study was conducted in the eastern coast of Korea where kelp bed restoration was in process with the removal of sea urchins. In addition to quantitative measurement for recovery using common community parameters, we investigated how fast the stability of a food web structure could be established in the newly restored kelp beds with an initially barren condition, using stable isotope analysis, in comparison with a nearby natural bed and barren site. At the restored bed, total algal biomass and diversity reached the levels of the natural bed within 1 year. While the δ13C and δ15N values of macroalgae and organic matter were separated isotopically, they were similar among sites, excluding organic matter at the natural bed in 2019. Most consumers showed similar isotopic values among sites, with overlapping range for δ13C of producers. However, some herbivores showed higher δ15N values as predators/omnivores, particularly at barrens, which could be explained by trophic plasticity depending on the macroalgal structure. In the restored bed, for the first year, higher trophic diversity (CR, CD) and lower trophic redundancy (MNND, SDNND) showed non-overlapping >50% CIs among sites. However, this distinctive stage moved toward the natural bed upon entering the second year as trophic diversity decreased and trophic redundancy increased while natural bed overlapped at
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- 2022
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11. Amino acid nitrogen and carbon isotope data: Potential and implications for ecological studies
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Hee Young Yun, Thomas Larsen, Bohyung Choi, Eun‐Ji Won, and Kyung‐Hoon Shin
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Ecology ,Ecology, Evolution, Behavior and Systematics ,Nature and Landscape Conservation - Abstract
Explaining food web dynamics, stability, and functioning depend substantially on understanding of feeding relations within a community. Bulk stable isotope ratios (SIRs) in natural abundance are well-established tools to express direct and indirect feeding relations as continuous variables across time and space. Along with bulk SIRs, the SIRs of individual amino acids (AAs) are now emerging as a promising and complementary method to characterize the flow and transformation of resources across a diversity of organisms, from microbial domains to macroscopic consumers. This significant AA-SIR capacity is based on empirical evidence that a consumer's SIR, specific to an individual AA, reflects its diet SIR coupled with a certain degree of isotopic differences between the consumer and its diet. However, many empirical ecologists are still unfamiliar with the scope of applicability and the interpretative power of AA-SIR. To fill these knowledge gaps, we here describe a comprehensive approach to both carbon and nitrogen AA-SIR assessment focusing on two key topics: pattern in AA-isotope composition across spatial and temporal scales, and a certain variability of AA-specific isotope differences between the diet and the consumer. On this basis we review the versatile applicability of AA-SIR to improve our understanding of physiological processes as well as food web functioning, allowing us to reconstruct dominant basal dietary sources and trace their trophic transfers at the specimen and community levels. Given the insightful and opportunities of AA-SIR, we suggest future applications for the dual use of carbon and nitrogen AA-SIR to study more realistic food web structures and robust consumer niches, which are often very difficult to explain in nature. 1 Introduction 2 Understanding of AA isotope ratios variance for ecological studies 2.1 N and C isotope variability in consumer AAs 2.2 Is AA-SIR variable across spatio-temporal scales? 3 Common use of AA δ15N and AA δ13C variables for food webs studies 3.1 Estimating consumer TP 3.2 Identifying multiple producers using AA isotope fingerprints 3.3 Identifying nutritional sources from non-AA components 4 Interpretation of AA-SIR for defining trophic transfer between green and brown food webs 4.1 Defining trophic interactions of consumers with green- as well as brown-based resource 4.2 Quantifying the relative importance of green vs brown sources in consumer diets 5 Limitations of AA-SIR in identifying food web structures and ecosystem functioning 5.1 AA δ15N approach: Beyond the robust ΔN patterns in consumers 5.2 AA δ15N approach: Beyond the robust ΔN patterns in primary producers 5.3 Beyond dietary EAA δ13C estimates: Effects of the microbiome 6. Collaboration of N and C-SIR in AAs: Future study 6.1 Suggestion 1. Proxies for assessing the ecological niche of a focal species 6.2 Suggestion 2. Estimating complex diet composition of omnivores 7 Conclusion
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- 2022
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12. Evaluation of the quantity and the carbon isotopic composition of amino acids by using diverse sample residues after lipid extraction
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Eun-Ji Won, Hee Young Yun, Hyuntae Choi, Kyung-Hoon Shin, and Dong-Hun Lee
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Cyanobacteria ,chemistry.chemical_element ,02 engineering and technology ,01 natural sciences ,Biochemistry ,Gas Chromatography-Mass Spectrometry ,Analytical Chemistry ,Soil ,Sample preparation ,Amino Acids ,Isotope analysis ,Synechococcus ,chemistry.chemical_classification ,Carbon Isotopes ,Chromatography ,biology ,δ13C ,Isotope ,010401 analytical chemistry ,Biogeochemistry ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Lipids ,0104 chemical sciences ,Amino acid ,chemistry ,0210 nano-technology ,Carbon - Abstract
Compound-specific stable isotope analysis (CSIA) becomes a critical tool in the fields of ecology and biogeochemistry to trace basal carbon sources such as amino acids (AAs) and fatty acids (FAs) in natural environments. However, in many studies, either AAs or FAs have been analyzed due to restricted sample amounts. The aim of this study is to report a single-sample preparation method by identifying AAs using lipid-free residues derived from a typical FA analytic procedure. The capability of the lipid-free residues was evaluated by determining AA quantities and carbon isotopic compositions (δ13C) across diverse sample matrices, including soil, suspended particulate organic matter (SPM), fish tissue, and cultured cyanobacteria (N = 3). Our result showed that the use of lipid-free residues after a typical lipid extraction procedure in most samples did not significantly reduce the AA quantities, relative to the conventional AA method (done by using whole samples), except in case of samples of soil. Moreover, δ13C compositions of the most AAs (from essential to nonessential AAs) in all samples were not significantly different, with an average isotope difference of
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- 2020
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13. Stepwise Approach for Tracing the Geographical Origins of the Manila Clam
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Young-Shin, Go, Eun-Ji, Won, Seung-Hee, Kim, Dong-Hun, Lee, Jung-Ha, Kang, and Kyung-Hoon, Shin
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While there are many studies that have reported methods for tracing the geographical origin of seafoods, most of them have focused on identifying parameters that can be used effectively and not the direct application of these methods. In this study, we attempted to differentiate the geographical origins of the Manila clam
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- 2022
14. Systematic tracing of nitrate sources in a complex river catchment: An integrated approach using stable isotopes and hydrological models
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Seung-Hee Kim, Dong-Hun Lee, Min-Seob Kim, Han-Pil Rhee, Jin Hur, and Kyung-Hoon Shin
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Environmental Engineering ,Ecological Modeling ,Pollution ,Waste Management and Disposal ,Water Science and Technology ,Civil and Structural Engineering - Published
- 2023
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15. The Interplay of Mycosporine-like Amino Acids between Phytoplankton Groups and Northern Krill (
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Bo Kyung, Kim, Mi-Ok, Park, Jun-Oh, Min, Sung-Ho, Kang, Kyung-Hoon, Shin, Eun Jin, Yang, and Sun-Yong, Ha
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Svalbard ,Ultraviolet Rays ,Chlorophyll A ,Phytoplankton ,Animals ,Water ,Amino Acids ,Estuaries ,Euphausiacea - Abstract
We investigated pigment and mycosporine-like amino acid (MAA) concentrations of phytoplankton and Northern krill (
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- 2022
16. Seasonal Flux of Ice‐Related Organic Matter During Under‐Ice Blooms in the Western Arctic Ocean Revealed by Algal Lipid Biomarkers
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Jong‐Ku Gal, Sun‐Yong Ha, Jisoo Park, Kyung‐Hoon Shin, Dongseon Kim, Nan‐Young Kim, Sung‐Ho Kang, and Eun Jin Yang
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Geophysics ,Space and Planetary Science ,Geochemistry and Petrology ,Earth and Planetary Sciences (miscellaneous) ,Oceanography - Published
- 2022
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17. Optical and molecular indices of dissolved organic matter for estimating biodegradability and resulting carbon dioxide production in inland waters: A review
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Most Shirina Begum, Ji-Hyung Park, Liyang Yang, Kyung Hoon Shin, and Jin Hur
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Biodegradation, Environmental ,Environmental Engineering ,Anthropogenic Effects ,Ecological Modeling ,Carbon Dioxide ,Dissolved Organic Matter ,Coloring Agents ,Pollution ,Waste Management and Disposal ,Water Science and Technology ,Civil and Structural Engineering - Abstract
Biodegradable dissolved organic carbon (BDOC) constitutes the most labile fraction of dissolved organic matter (DOM), which also functions as a source of CO
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- 2023
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18. Effects of temperature and starvation on life history traits and fatty acid profiles of the Antarctic copepod Tigriopus kingsejongensis
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Deok-Seo Yoon, Hyuntae Choi, Alaa El-Din H. Sayed, Kyung-Hoon Shin, Joung Han Yim, Sanghee Kim, Min-Chul Lee, and Jae-Seong Lee
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Ecology ,Animal Science and Zoology ,Aquatic Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2023
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19. Effects of temperature and combinational exposures on lipid metabolism in aquatic invertebrates
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Deok-Seo, Yoon, Eunjin, Byeon, Duck-Hyun, Kim, Min-Chul, Lee, Kyung-Hoon, Shin, Atsushi, Hagiwara, Heum Gi, Park, and Jae-Seong, Lee
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Mammals ,Physiology ,Health, Toxicology and Mutagenesis ,Fatty Acids ,Temperature ,Penicillins ,Cell Biology ,General Medicine ,Carbon Dioxide ,Lipid Metabolism ,Toxicology ,Invertebrates ,Biochemistry ,Fatty Acids, Unsaturated ,Animals - Abstract
Studies of changes in fatty acids in response to environmental temperature changes have been conducted in many species, particularly mammals. However, few studies have considered aquatic invertebrates, even though they are particularly vulnerable to changes in environmental temperature. In this review, we summarize the process by which animals synthesize common fatty acids and point out differences between the fatty acid profiles of vertebrates and those of aquatic invertebrates. Unlike vertebrates, some aquatic invertebrates can directly synthesize polyunsaturated fatty acids (PUFAs), which can be used to respond to temperature changes. Various studies have shown that aquatic invertebrates increase the degree of saturation in their fatty acids through an increase in saturated fatty acid production or a decrease in PUFAs as the temperature increases. In addition, we summarize recent studies that have examined the complex effects of temperature and combinational stressors to determine whether the degree of saturation in aquatic invertebrates is influenced by other factors. The combined effects of carbon dioxide partial pressure, food quality, starvation, salinity, and chemical exposures have been confirmed, and fatty acid profile changes in response to high temperature were greater than those from combinational stressors.
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- 2022
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20. Bacterial Bioremediation of Petroleum Hydrocarbon in Ocean
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K. Suresh Kumar, Kyung-Hoon Shin, Pratibha Kushwaha, Kamleshwar Singh, and Sushma Kumari
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chemistry.chemical_classification ,chemistry.chemical_compound ,Bioremediation ,Hydrocarbon ,chemistry ,Environmental chemistry ,Environmental science ,Petroleum - Published
- 2021
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21. Environmental fate and trophic transfer of synthetic musk compounds and siloxanes in Geum River, Korea: Compound-specific nitrogen isotope analysis of amino acids for accurate trophic position estimation
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Dokyun Kim, Ha-Eun Cho, Eun-Ji Won, Hye-Jin Kim, Sunggyu Lee, Kwang-Guk An, Hyo-Bang Moon, and Kyung-Hoon Shin
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Food Chain ,Nitrogen Isotopes ,Siloxanes ,Synthetic musk compounds ,Trophic position ,Geum ,Amino acid ,Environmental sciences ,Fatty Acids, Monounsaturated ,Rivers ,GE1-350 ,Amino Acids ,Trophic magnification factor ,Water Pollutants, Chemical ,General Environmental Science ,Environmental Monitoring - Abstract
Despite the extensive usage of synthetic musk compounds (SMCs) and siloxanes in various personal care products (PCPs), trophic magnification of such chemicals in aquatic environments remains unexplored. In June and September 2020, eleven SMCs and nineteen siloxanes were measured in water, sediments, and biota. Samples were collected from two sites where levels were expected to be influenced by the distance from the wastewater treatment plant (WWTP) in the Geum River, Republic of Korea, were expected. High concentrations of SMCs and siloxanes entered through WWTP were measured in water, sediment, and biota at the both sites and both seasons. The δ15N of amino acids provided a high-resolution food web and accurate trophic position (TP), which is an important factor for determining the trophic magnification factor (TMF). Among 24 TMFs, 19 of them were
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- 2021
22. Effects of ethanol preservation and formalin fixation on amino acid stable isotope analysis (δ 13 C and δ 15 N) and its ecological applications
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Darren C. J. Yeo, Kenny W. J. Chua, Jia Huan Liew, and Kyung-Hoon Shin
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chemistry.chemical_classification ,chemistry.chemical_compound ,Ethanol ,Chromatography ,chemistry ,δ13C ,Environmental science ,Ocean Engineering ,δ15N ,Amino acid ,Isotope analysis - Published
- 2020
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23. Chemosynthetic bacterial signatures in Frenulata tubeworm Oligobrachia sp. in an active mud volcano of the Canadian Beaufort Sea
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Young Keun Jin, Dong-Hun Lee, Kyung-Hoon Shin, Dahae Kim, Charles K. Paull, Jung-Hyun Kim, and Yung Mi Lee
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Chemosynthesis ,Oceanography ,Ecology ,Oligobrachia ,Beaufort sea ,Aquatic Science ,Ecology, Evolution, Behavior and Systematics ,Geology ,Mud volcano - Published
- 2019
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24. Primary Productivity and Photosynthetic Pigment Production Rates of Periphyton and Phytoplankton in Lake Paldang using 13C Tracer
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Kyung-Hoon Shin, Jin Hur, Jun oh Min, and Sun Yong Ha
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chemistry.chemical_compound ,chemistry ,Environmental chemistry ,TRACER ,Phytoplankton ,Environmental science ,Photosynthetic pigment ,Periphyton ,Primary productivity - Published
- 2019
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25. Complementary approach for accurate determination of carbon isotopic compositions in γ‐hydroxybutyric acid using gas chromatography/combustion‐isotope ratio mass spectrometry
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Hee Young Yun, Sanggil Choe, Eunyoung Han, Kyung-Hoon Shin, Meejung Park, Dong-Hun Lee, Sanghwan In, Hyojeong Kim, and Eunmi Kim
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Chromatography ,Chemistry ,Mass balance ,010401 analytical chemistry ,Organic Chemistry ,Derivative ,Urine ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,Isotope fractionation ,Gas chromatography ,Isotope-ratio mass spectrometry ,Spectroscopy ,Stoichiometry ,Isotope analysis - Abstract
RATIONALE γ-Hydroxybutyric acid (GHB) is a naturally endogenous neurotransmitter that is popular as a recreational drug due to its sedative, hypnotic, and euphoric effects. GHB derived from endogenous production or exogenous ingestion has been effectively discriminated by carbon isotopic compositions (δ13 C values) through gas chromatography/combustion-isotope ratio mass spectrometry (GC/C-IRMS). However, an unintended uncertainty of isotopic signatures caused by a wide range of GHB quantities remains unsolved when using only single-isotope corrections of the di-TMS derivative. METHODS The δ13 C values of the original GHB standard were first determined by elemental analyzer/isotope ratio mass spectrometry (EA/IRMS). The δ13 C values of silylated GHB in concentrations from 10 to 500 ppm were determined by GC/C-IRMS. With respect to the silylated reaction products, the correction of δ13 C values for the introduced carbons was calculated from a stoichiometric mass balance equation. RESULTS The results showed a significant quantity-dependent trend in δ13 C values of introduced carbon (δ13 Cdi-TMS values) with increased GHB standard concentrations (r2 = 0.70, p
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- 2019
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26. Contrasting developments of Pleistocene calcareous clay units in the middle Bengal Fan and their implications for paleoenvironmental changes
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Jang-Jun Bahk, In-Kwon Um, and Kyung-Hoon Shin
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Turbidity current ,Early Pleistocene ,010504 meteorology & atmospheric sciences ,Pleistocene ,Terrigenous sediment ,Geochemistry ,010502 geochemistry & geophysics ,01 natural sciences ,chemistry.chemical_compound ,chemistry ,Paleoceanography ,General Earth and Planetary Sciences ,Carbonate ,Sedimentary rock ,Calcareous ,Geology ,0105 earth and related environmental sciences ,General Environmental Science - Abstract
This study details sedimentary and compositional characteristics of the Middle to Late and Early Pleistocene calcareous clay units recovered from Site U1453 in the middle Bengal Fan. The sedimentary characteristics reveal that the calcareous clay units consist of calcareous hemipelagic muds and terrigenous hemiturbidite muds which represent intervening periods of hemipelagic sedimentation sensu stricto and a slow sedimentation from suspension clouds of low-concentration turbidity currents on the fan surface, otherwise dominated by sand and mud turbidites. Variations in compositions, such as organic and inorganic carbon contents and δ13C of bulk organic matters of the calcareous hemipelagic muds, indicate the glacial-interglacial climate forcing of carbonate dissolution, surface marine productivity, and sources of particulate organic matters in the middle Bengal Fan during the Middle to Late Pleistocene. The glacial-interglacial climate forcing on hemipelagic sedimentation seems to be much obscure during the Early Pleistocene because of dilution by terrigenous clay inputs. Grain-size distribution of bulk sediments suggests the presence of coarse foraminifer and finer nannofossil modes in the calcareous clay units and the size of dominant foraminifer species could have been finer in the Early Pleistocene.
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- 2019
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27. Analysis of Food Web Structure of Nakdong River Using Quantitative Food Web Parameters Obtained from Carbon and Nitrogen Stable Isotope Ratios
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Mei-Yan Jin, Bohyung Choi, Kwang-Hyeon Chang, Geung-Hwan La, Kyung-Lak Lee, Hyun-Woo Kim, Hye-Ji Oh, Kyung-Hoon Shin, and Min-Ho Jang
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chemistry ,Stable isotope ratio ,Environmental chemistry ,chemistry.chemical_element ,Environmental science ,Nitrogen ,Carbon ,Zooplankton ,Food web ,Trophic level - Published
- 2019
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28. Tight trophic association between benthic diatom blooms and shallow-water megabenthic communities in a rapidly deglaciated Antarctic fjord
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Hye-Won Moon, Bohyung Choi, In-Young Ahn, Kyung-Hoon Shin, and Sun-Yong Ha
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0106 biological sciences ,geography ,geography.geographical_feature_category ,010504 meteorology & atmospheric sciences ,biology ,010604 marine biology & hydrobiology ,Fauna ,δ15N ,Aquatic Science ,Oceanography ,biology.organism_classification ,01 natural sciences ,Food web ,Diatom ,Benthic zone ,Environmental science ,Cove ,0105 earth and related environmental sciences ,Isotope analysis ,Trophic level - Abstract
This study reports isotopic evidence of a unique and highly efficient trophic structure based on a rarely reported benthic diatom species in a rapidly warming Antarctic fjord (Marian Cove; MC). Recent surveys of MC revealed a very conspicuous feature, an intense, persistent benthic diatom bloom (‘benthic diatom bush’) overgrowing a variety of common megabenthic fauna, primarily filter feeders (bivalves, ascidians, and demosponges), which occurred widely at shallow depths. To ascertain if the benthic diatom bloom is consumed as a primary food source, δ13C and δ15N were analyzed in the associated filter feeders and other herbivores, as well as in the diatom bush and other potential food sources (microphytobenthos, sedimentary organic matter and macroalgae). The analysis showed that the δ13C values of all filter feeders (−23.5 to −25.2‰) were very similar to those of the diatom bush (−23.1 to −23.6‰), strongly suggesting that these benthic diatoms are the principal diet of the associated filter feeders. The isotopic signatures of the other food sources were very close to those of the diatom bush, indicating that the organic matter had the same origin, namely benthic diatoms. Given its quality, quantity and availability, the diatom bush could be regarded as the primary food source. The benthic diatom bush was predominated by the chain-forming centric diatom Paralia sp., which occurs in shallow coastal waters with a wide range of salinity in various geographic localities. Thus, the Paralia sp. bloom in this rapidly warming fjord also indicates its potential utility as an indicator of climate-induced environmental changes. Additional isotopic analysis of other common fauna showed that the benthic food web in this fjord comprised up to four trophic levels of consumers, with starfish and isopods at the apex. Given that filter feeders comprise the largest trophic group in the cove and many other Antarctic coastal waters, the results of this study strongly suggest that benthic diatoms are of prime importance in supporting the benthic food web in MC, and possibly other nearshore Antarctic waters. Further studies on the mechanism underlying benthic diatom blooms and their relevance to climate-induced processes would provide better project future scenarios for rapidly warming fjord ecosystems.
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- 2019
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29. Lipid metabolism modulation by five different food types in the monogonont marine rotifer Brachionus koreanus
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Jun Chul Park, Deok-Seo Yoon, Hee Jin Kim, Atsushi Hagiwara, Kyung-Hoon Shin, Jae-Seong Lee, Min-Chul Lee, and Hyuntae Choi
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chemistry.chemical_classification ,0303 health sciences ,biology ,Fatty acid metabolism ,Very long chain fatty acid ,Fatty acid ,04 agricultural and veterinary sciences ,Metabolism ,Aquatic Science ,Brachionus ,biology.organism_classification ,Isochrysis galbana ,03 medical and health sciences ,chemistry.chemical_compound ,Tetraselmis suecica ,Fatty acid desaturase ,chemistry ,040102 fisheries ,biology.protein ,0401 agriculture, forestry, and fisheries ,Food science ,030304 developmental biology - Abstract
To investigate the effects of five different foods on fatty acid metabolism in the monogonont marine rotifer Brachionus koreanus, we measured life cycle parameters, analyzed the area of Nile red staining, fatty acid composition, and mRNA expression of fatty acid desaturase (Fads) and elongation of very long chain fatty acid (Elovl) genes. Among the five different foods (Tetraselmis suecica, Chlorella sp., Isochrysis galbana, Chaetoceros sp., and Nannochloropsis oculata), life span of I. galbana-fed group was significantly increased compared to the other groups. However, the reproduction parameters (cumulative offspring and daily reproduction) were the highest in T. suecica-fed group, and the lowest in Chlorella sp.-fed group. The area of Nile red staining analysis showed similar trends, in respect to the content of total fatty acid. The single fatty acid analysis result clearly indicated that not only the most of the content of fatty acid was highly dependent on the food types, especially in omega-6 fatty acids group, but also, B. koreanus could newly synthesize some specific fatty acids by themselves (e.g. omega-3 and -9 families). Lastly, the mRNA expression of Elovl and Fads genes were modulated by food types indicating the lipid metabolism could be controlled by food in B. koreanus and probably very small amount of 18:3n-3 fatty acids was utilized and synthesized omega-3 fatty acids through the increase in Elovl and Fads gene expression in Chaetoceros sp. and N. oculata-fed groups. In conclusion, this study revealed that although B. koreanus could modulate fatty acid metabolism by itself, some nutrient values (e.g. omega-6 fatty acids) should be considered, therefore, it is important to understand the essential nutrient through both the molecular and quantitative analysis.
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- 2019
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30. Potential Cosmetic Active Ingredients Derived from Marine By-Products
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Evi Amelia Siahaan, null Agusman, Ratih Pangestuti, Kyung-Hoon Shin, and Se-Kwon Kim
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Cosmeceuticals ,Drug Discovery ,Animals ,Humans ,Pharmaceutical Science ,Chitin ,Cosmetics ,Skin Diseases ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,Skin Aging - Abstract
The market demand for marine-based cosmetics has shown a tremendous growth rate in the last decade. Marine resources represent a promising source of novel bioactive compounds for new cosmetic ingredient development. However, concern about sustainability also becomes an issue that should be considered in developing cosmetic ingredients. The fisheries industry (e.g., fishing, farming, and processing) generates large amounts of leftovers containing valuable substances, which are potent sources of cosmeceutical ingredients. Several bioactive substances could be extracted from the marine by-product that can be utilized as a potent ingredient to develop cosmetics products. Those bioactive substances (e.g., collagen from fish waste and chitin from crustacean waste) could be utilized as anti-photoaging, anti-wrinkle, skin barrier, and hair care products. From this perspective, this review aims to approach the potential active ingredients derived from marine by-products for cosmetics and discuss the possible activity of those active ingredients in promoting human beauty. In addition, this review also covers the prospect and challenge of using marine by-products toward the emerging concept of sustainable blue cosmetics.
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- 2022
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31. Influences of Seasonal Variability and Potential Diets on Stable Isotopes and Fatty Acid Compositions in Dominant Zooplankton in the East Sea, Korea
- Author
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Jieun Kim, Hee-Young Yun, Eun-Ji Won, Hyuntae Choi, Seok-Hyeon Youn, and Kyung-Hoon Shin
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Ocean Engineering ,food web ,trophic dynamics ,primary production ,chlorophyll-a size fraction ,phytoplankton ,Water Science and Technology ,Civil and Structural Engineering - Abstract
Despite their crucial roles in transporting primary productions in marine food webs, the trophic dynamics of zooplankton throughout the seasons have rarely been studied. In this study, four dominant zooplankton taxa with phytoplankton size composition and productivity were collected over four seasons in the East Sea, which is known to change more rapidly than global trends. We then analyzed the δ13C and δ15N values and fatty acid composition of zooplankton. The heavy δ13C values in February and August 2021 were observed with high concentrations of total chlorophyll-a, and the δ13C differences among the four zooplankton taxa in the coastal region (site 105-05) were most pronounced in February 2021. The relative amounts of eicosapentaenoic acid (C20:5(n-3)) and docosahexaenoic acid (C22:6(n-3)), indicators of phytoplankton nutritional quality, were also highest in February 2021. Non-metric multivariate analyses showed dissimilarity among zooplankton taxa during the high productivity period based on chlorophyll-a concentrations (51.6%), which may be due to an increase in available foods during the highly productive season. In conclusion, the dietary intake of zooplankton can be reduced by the transition of phytoplankton, which has important implications for the impact of climate change on planktonic ecosystems in the East Sea.
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- 2022
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32. Genome-wide identification of fatty acid synthesis genes, fatty acid profiles, and life parameters in two freshwater water flea Daphnia magna strains
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Deok-Seo, Yoon, Eunjin, Byeon, Duck-Hyun, Kim, Yoseop, Lee, Hyuntae, Choi, Heum Gi, Park, Alaa El-Din H, Sayed, Kyung-Hoon, Shin, Min-Chul, Lee, and Jae-Seong, Lee
- Subjects
Daphnia ,Physiology ,Fatty Acids ,Fatty Acids, Omega-3 ,Flavin-Adenine Dinucleotide ,Animals ,Fresh Water ,Cladocera ,Molecular Biology ,Biochemistry ,Water Pollutants, Chemical - Abstract
The freshwater water flea Daphnia magna is a planktonic animal belonging to the Cladocera. To evaluate differences between two D. magna strains (KIT and NIES) in terms of life parameters and fatty acid profiles, we examined several endpoints. In the D. magna KIT strain, the numbers of total and cumulative offspring were lower at 23 °C and higher at 14 °C than in the D. magna NIES strain. However, at 14 °C, the D. magna KIT strain showed an increased lifespan. Although the n-3/n-6 polyunsaturated fatty acids (PUFA) ratio was always decreased at a low temperature, the PUFA ratio in the KIT strain had a higher value on day 3 than the NIES strain, which gave it higher adaptability to low temperature. In addition, we identified the elongation of very long chain fatty acids (elovl) and fatty acid desaturase (fad) genes, which are involved in fatty acid biosynthesis pathways, in the genomes of both D. magna KIT and NIES. The Elovl and Fad genes in both D. magna strains were highly conserved, including tandem duplicated Elovl 1/7 genes. This study provides new information about the molecular basis for the difference in temperature sensitivity between two strains of D. magna.
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- 2022
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33. Changes in the burial efficiency and composition of terrestrial organic carbon along the Mackenzie Trough in the Beaufort Sea
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Dahae Kim, Jung-Hyun Kim, Tommaso Tesi, Sujin Kang, Alessio Nogarotto, Kwangkyu Park, Dong-Hun Lee, Young Keun Jin, Kyung-Hoon Shin, and Seung-Il Nam
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Aquatic Science ,Oceanography - Published
- 2022
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34. Dump Combustor Experiments of MgB2 and Other Metal Microparticles
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Minwook Chang, Kenneth H. Yu, Kyung-Hoon Shin, and Ashwani K. Gupta
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Metal ,Materials science ,visual_art ,Metallurgy ,Combustor ,visual_art.visual_art_medium - Published
- 2021
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35. Exploiting of Secondary Raw Materials from Fish Processing Industry as a Source of Bioactive Peptide-Rich Protein Hydrolysates
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Kyung-Hoon Shin, K. Elavarasan, Fatih Özogul, Se-Kwon Kim, Muthusamy Karthikeyan, Girija Gajanan Phadke, and Nikheel Bhojraj Rathod
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Fish Proteins ,Proteases ,QH301-705.5 ,Pharmaceutical Science ,Peptide ,Computational biology ,Review ,Raw material ,Biology ,Hydrolysate ,Drug Discovery ,Animals ,Humans ,Food-Processing Industry ,Biology (General) ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,Fish processing ,chemistry.chemical_classification ,Waste Products ,Mechanism (biology) ,Hydrolysis ,Fishes ,ACE inhibitory activity ,Amino acid ,antioxidants ,chemistry ,Gelatin ,Peptides ,bioactive peptides ,fishery by-product - Abstract
Developing peptide-based drugs are very promising to address many of the lifestyle mediated diseases which are prevalent in a major portion of the global population. As an alternative to synthetic peptide-based drugs, derived peptides from natural sources have gained a greater attention in the last two decades. Aquatic organisms including plants, fish and shellfish are known as a rich reservoir of parent protein molecules which can offer novel sequences of amino acids in peptides, having unique bio-functional properties upon hydrolyzing with proteases from different sources. However, rather than exploiting fish and shellfish stocks which are already under pressure due to overexploitation, the processing discards, regarded as secondary raw material, could be a potential choice for peptide based therapeutic development strategies. In this connection, we have attempted to review the scientific reports in this area of research that deal with some of the well-established bioactive properties, such as antihypertensive, anti-oxidative, anti-coagulative, antibacterial and anticarcinogenic properties, with reference to the type of enzymes, substrate used, degree of particular bio-functionality, mechanism, and wherever possible, the active amino acid sequences in peptides. Many of the studies have been conducted on hydrolysate (crude mixture of peptides) enriched with low molecular bioactive peptides. In vitro and in vivo experiments on the potency of bioactive peptides to modulate the human physiological functions beneficially have demonstrated that these peptides can be used in the prevention and treatment of non-communicable lifestyle mediated diseases. The information synthesized under this review could serve as a point of reference to drive further research on and development of functionally active therapeutic natural peptides. Availability of such scientific information is expected to open up new zones of investigation for adding value to underutilized secondary raw materials, which in turn paves the way for sustainability in fish processing. However, there are significant challenges ahead in exploring the fish waste as a source of bioactive peptides, as it demands more studies on mechanisms and structure–function relationship understanding as well as clearance from regulatory and statutory bodies before reaching the end user in the form of supplement or therapeutics.
- Published
- 2021
36. Multimedia distributions and the fate of microcystins from freshwater discharge in the Geum River Estuary, South Korea: Applicability of POCIS for monitoring of microalgal biotoxins
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Yoonyoung An, Seongjin Hong, Youngnam Kim, Jihyun Cha, Chang-Eon Lee, Kyung-Hoon Shin, and Mungi Kim
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Microcystins ,Health, Toxicology and Mutagenesis ,Fresh Water ,Toxicology ,computer.software_genre ,Polar organic chemical integrative sampler ,Rivers ,Tandem Mass Spectrometry ,Microalgae ,Ecosystem ,geography ,Suspended solids ,geography.geographical_feature_category ,Multimedia ,Aquatic ecosystem ,Estuary ,General Medicine ,Contamination ,Geum ,Pollution ,humanities ,Salinity ,Bioaccumulation ,Environmental science ,Estuaries ,Surface water ,computer ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Here, we investigated the characteristics of the environmental multimedia distribution of microcystins (MCs) introduced from freshwater discharge through the estuary dam of the Geum River. In addition, the applicability of a passive sampling device (polar organic chemical integrative sampler, POCIS) for monitoring MCs was evaluated. Surface water, suspended solids (SS), sediments, and oysters were collected from the inner and outer estuary dam. Seven MC variants were analyzed using HPLC-MS/MS. POCIS was deployed at three sites over one week, and MCs were monitored for four weeks from August to September 2019. Before POCIS was deployed in the field, compounds-specific sampling rates of MCs were determined as functions of water temperature (10, 20, and 30 °C), flow rate (0, 0.38, and 0.76 m s−1), and salinity (0, 15, and 30 psu) in the laboratory. The sampling rates of MCs in POCIS increased significantly with increasing water temperature and flow rate, whereas salinity did not significantly affect the sampling rates between freshwater and saltwater. The MCs in the Geum River Estuary mainly existed as particulate forms (mean: 78%), with relatively low proportions of dissolved forms (mean: 22%), indicating that MCs were mainly contained in cyanobacterial cells. There was no significant correlation among the concentrations of MCs in water, SS, sediments, and oysters. Time-weighted average concentrations of MCs from POCIS were not significantly correlated with the concentrations of MCs in water and oysters. The metabolites of MCs, including MC-LR-GSH, MC-LR-Cys, MC-RR-GSH, and MC-RR-Cys, were detected in oysters (no metabolites were detected in POCIS). Overall, POCIS can be useful for monitoring dissolved MCs in the aquatic ecosystem, particularly in calculating time-weighted average concentrations, but it seems to have limitations in evaluating the contamination status of total MCs, mainly in particulate form.
- Published
- 2021
37. Spatial distribution and origin of organic matters in an Arctic fjord system based on lipid biomarkers (n-alkanes and sterols)
- Author
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Hyoung Min Joo, Kyung-Hoon Shin, Bokyung Kim, Bo Yeon Lee, Jong-Ku Gal, Sun-Yong Ha, Jin-Young Jung, Chorom Shim, and Il-Nam Kim
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Total organic carbon ,geography ,Chlorophyll a ,geography.geographical_feature_category ,biology ,Chemistry ,Chlorophyll A ,Fjord ,Brassicasterol ,biology.organism_classification ,Biochemistry ,chemistry.chemical_compound ,Sterols ,Water column ,Diatom ,Environmental chemistry ,Phytoplankton ,Alkanes ,Seawater ,Estuaries ,Biomarkers ,General Environmental Science ,Environmental Monitoring - Abstract
The concentration of n-alkanes (C17–C35) and sterols in marine particulate matter were investigated to trace the origin of organic carbon in Kongsfjorden in early spring (April). The spatial distributions of environmental factors (seawater temperature, salinity, density, turbidity, chlorophyll a (chl. a) and particulate organic carbon (POC) concentrations) and the cell density of phytoplankton differed between the inner and outer fjord regions. In addition, brassicasterol, diatom biomarker, showed a high concentration in the outer fjord and positive correlations with the chl. a and POC concentrations in the water column. In contrast, some sterols originating from terrestrial organic matter (OM), such as stigmasterol and campesterol, showed relatively higher concentrations in the inner fjord than in the outer fjord. Based on the distance-based redundancy analysis (db-RDA) result, the distributions of organic compounds are predominantly controlled by the water density and the POC and chl. a concentrations, and these distributions allowed us to divide the inner and outer fjord regions. However, the hierarchical clustering of principal components (HCPC) results obtained based on principal component analysis (PCA) using lipid biomarkers (C17–C35 alkanes and sterols) and environmental factors indicated that the clusters were distinguished by surface (0 m) and subsurface (>4 m) seawater samples rather than by any regional division. Notably, the concentration of relatively short-chain alkanes (average chain length (ACL): 24.6 ± 3.7) without a carbon preference for odd numbers (carbon preference index (CPI): 0.97 ± 0.11) in the sea surface layer was significantly higher than that of subsurface seawater (ACL: 31.1 ± 0.5 and CPI: 1.06 ± 0.03) in the early spring. This suggests the potential of these compounds as indicators for tidewater glacier-derived OM and freshwater input by snow melt into the fjord system. Hence, these results demonstrate that the distributions of lipid biomarkers in the water column possibly provide important information for a comprehensive understanding of the origin and transport of OM in an Arctic fjord.
- Published
- 2021
38. Trophic Dynamics of Calanus hyperboreus in the Pacific Arctic Ocean
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Hyuntae Choi, Eun Jin Yang, Youngju Lee, Kyoung-Ho Cho, Sung-Ho Kang, Kyung-Hoon Shin, Haemin Won, and Jee-Hoon Kim
- Subjects
Geophysics ,Oceanography ,Arctic ,Space and Planetary Science ,Geochemistry and Petrology ,Stable isotope ratio ,Earth and Planetary Sciences (miscellaneous) ,Environmental science ,Zooplankton ,Calanus hyperboreus ,Trophic level - Published
- 2021
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39. A Multi-Elements Isotope Approach to Assess the Geographic Provenance of Manila Clams (
- Author
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Eun-Ji, Won, Seung Hee, Kim, Young-Shin, Go, K Suresh, Kumar, Min-Seob, Kim, Suk-Hee, Yoon, Germain, Bayon, Jung-Hyun, Kim, and Kyung-Hoon, Shin
- Subjects
traceability ,linear discriminant analysis ,Manila clam ,stable isotope ,authentication ,Article - Abstract
The increasing global consumption of seafood has led to increased trade among nations, accompanied by mislabeling and fraudulent practices that have rendered authentication crucial. The multi-isotope ratio analysis is considered as applicable tool for evaluating geographical authentications but requires information and experience to select target elements such as isotopes, through a distinction method based on differences in habitat and physiology due to origin. The present study examined recombination conditions of multi-elements that facilitated geographically distinct classifications of the clams to sort out appropriate elements. Briefly, linear discriminant analysis (LDA) analysis was performed according to several combinations of five stable isotopes (carbon (δ13C), nitrogen (δ15N), oxygen (δ18O), hydrogen (δD), and sulfur (δ34S)) and two radiogenic elements (strontium (87Sr/86Sr) and neodymium (143Nd/144Nd)), and the geographical classification results of the Manila clam Ruditapes philippinarum from Democratic People’s Republic of Korea (DPR Korea), Korea and China were compared. In conclusion, linear discriminant analysis (LDA) with at least four elements (C, N, O, and S) including S revealed a remarkable cluster distribution of the clams. These findings expanded the application of systematic multi-elements analyses, including stable and radiogenic isotopes, to trace the origins of R. philippinarum collected from the Korea, China, and DPR Korea.
- Published
- 2021
40. A nearby repeating fast radio burst in the direction of M81
- Author
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Kiyoshi Masui, Emmanuel Fonseca, V. M. Kaspi, Bryan Gaensler, I. H. Stairs, M. Mnchmeyer, Cherry Ng, Calvin Leung, M. A. Dobbs, Mohit Bhardwaj, A. Cook, P. J. Boyle, Shriharsh P. Tendulkar, M. Rafiei-Ravandi, Kendrick M. Smith, T. L. Landecker, Ziggy Pleunis, P. Chawla, Daniele Michilli, J. F. Kaczmarek, B. C. Andersen, A. V. Zwaniga, P. Scholz, T. Cassanelli, R. Mckinven, and Kyung-Hoon Shin
- Subjects
radio bursts ,010504 meteorology & atmospheric sciences ,Point source ,media_common.quotation_subject ,Milky Way ,FOS: Physical sciences ,transient sources ,Astrophysics ,01 natural sciences ,0103 physical sciences ,010303 astronomy & astrophysics ,0105 earth and related environmental sciences ,media_common ,Physics ,High Energy Astrophysical Phenomena (astro-ph.HE) ,Spiral galaxy ,Fast radio burst ,Canadian Hydrogen Intensity Mapping Experiment ,Astronomy and Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Interstellar medium ,Space and Planetary Science ,Sky ,Astrophysics of Galaxies (astro-ph.GA) ,radio transient sources ,Astrophysics - High Energy Astrophysical Phenomena ,radio pulsars ,Fermi Gamma-ray Space Telescope - Abstract
We report on the discovery of FRB 20200120E, a repeating fast radio burst (FRB) with low dispersion measure (DM), detected by the Canadian Hydrogen Intensity Mapping Experiment (CHIME)/FRB project. The source DM of 87.82 pc cm$^{-3}$ is the lowest recorded from an FRB to date, yet is significantly higher than the maximum expected from the Milky Way interstellar medium in this direction (~ 50 pc cm$^{-3}$). We have detected three bursts and one candidate burst from the source over the period 2020 January-November. The baseband voltage data for the event on 2020 January 20 enabled a sky localization of the source to within $\simeq$ 14 sq. arcmin (90% confidence). The FRB localization is close to M81, a spiral galaxy at a distance of 3.6 Mpc. The FRB appears on the outskirts of M81 (projected offset $\sim$ 20 kpc) but well inside its extended HI and thick disks. We empirically estimate the probability of chance coincidence with M81 to be $< 10^{-2}$. However, we cannot reject a Milky Way halo origin for the FRB. Within the FRB localization region, we find several interesting cataloged M81 sources and a radio point source detected in the Very Large Array Sky Survey (VLASS). We searched for prompt X-ray counterparts in Swift/BAT and Fermi/GBM data, and for two of the FRB 20200120E bursts, we rule out coincident SGR 1806$-$20-like X-ray bursts. Due to the proximity of FRB 20200120E, future follow-up for prompt multi-wavelength counterparts and sub-arcsecond localization could be constraining of proposed FRB models., Published to ApJL
- Published
- 2021
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41. Long-term environmental changes in the Geum Estuary (South Korea): Implications of river impoundments
- Author
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Kyung-Hoon Shin, Kwangchul Jang, Sujin Kang, Seung-il Nam, Young Jin Joe, and Jung-Hyun Kim
- Subjects
0106 biological sciences ,Geologic Sediments ,010501 environmental sciences ,Aquatic Science ,Oceanography ,01 natural sciences ,Deposition (geology) ,Sedimentary depositional environment ,Rivers ,Republic of Korea ,0105 earth and related environmental sciences ,Total organic carbon ,Hydrology ,geography ,geography.geographical_feature_category ,biology ,010604 marine biology & hydrobiology ,Sediment ,Estuary ,Sedimentation ,biology.organism_classification ,Geum ,Pollution ,Environmental science ,Sedimentary rock ,Estuaries ,Environmental Monitoring - Abstract
We investigated a sediment core collected from the Geum Estuary through sedimentological and geochemical analyses. Three lithological units were classified based on sedimentological characteristics. Unit 1 and Unit 3 were geochemically distinct, while Unit 2 was the transitional phase between them. The geochemical results suggest that the contribution of terrestrial organic carbon (OC) to the sedimentary OC pool in the coarse-grained Unit 1 was lesser than that of fine-grained Unit 3. The excess activity (210Pbex) and the sedimentation rate indicate that Unit 1 corresponded to 1977 Common Era (CE). Since the first dam construction on the Geum River began in 1975 CE, the deposition of Unit 1 in the Geum Estuary is likely associated with river impoundments, which reduce the delivery of fine-grained sediment and terrestrial OC to the estuary. This study highlights the role of river impoundments in altering the sedimentary OC and thus the sedimentary environment in the estuary.
- Published
- 2020
42. Trophic Dynamics of Zooplankton Before and After Polar Night in the Kongsfjorden (Svalbard): Evidence of Trophic Position Estimated by δ15N Analysis of Amino Acids
- Author
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Hyuntae Choi, Sun-Yong Ha, Seunghan Lee, Jee-Hoon Kim, and Kyung-Hoon Shin
- Subjects
zooplankton ,0106 biological sciences ,Thysanoessa ,lcsh:QH1-199.5 ,010504 meteorology & atmospheric sciences ,Zoology ,Ocean Engineering ,lcsh:General. Including nature conservation, geographical distribution ,Aquatic Science ,Oceanography ,Kongsfjorden ,01 natural sciences ,Zooplankton ,trophic position ,Svalbard ,Parasagitta elegans ,lcsh:Science ,0105 earth and related environmental sciences ,Water Science and Technology ,Trophic level ,Global and Planetary Change ,Polar ecology ,Polar night ,biology ,010604 marine biology & hydrobiology ,fungi ,biology.organism_classification ,nitrogen isotope ,Calanus ,lcsh:Q ,Omnivore ,amino acid - Abstract
In polar ecology, zooplankton diets and survival rates vary according to the seasonality of solar radiation and oceanographic conditions. Each zooplankton species has evolved feeding strategies to survive in the diet-limited conditions of the “polar night.” Many zooplankton studies have reported seasonal adaptations in feeding activity during polar night based on their trophic niches. Nitrogen isotope analysis of amino acids has provided improved accuracy in estimates of trophic position (TP) in various marine species. In this study, field work was conducted in Kongsfjorden before (October 2017) and after polar night (April 2018). As representative zooplankton, an amphipod (Themisto abyssorum), euphausids (Meganycitiphanes norvegica and Thysanoessa sp.), a chaetognath (Parasagitta elegans), and copepods (Calanus spp. and Oithona similis) were collected. trophic position values of each taxon were estimated using the nitrogen isotope ratio of glutamic acid (δ15NGlu) and phenylalanine (δ15NPhe). Results showed that TP values of P. elegans were relatively constant, averaging 3.2 in both seasons, likely due to continuous feeding activity during polar night. Trophic position values were also constant for Calanus spp., ranging 2.5–3.0 in both seasons, due to their ability to utilize stored high-energy wax. In contrast, average TP values for O. similis, an omnivorous zooplankton, were 2.9 in October and 2.3 the following April. Trophic position values for O. similis before polar night can be attributed to the relatively high availability of algae during longer periods of daylight. We found that TP variation in zooplankton before and after polar night differed according to feeding activities in diet-restricted circumstances.
- Published
- 2020
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43. Effects of low temperature on longevity and lipid metabolism in the marine rotifer Brachionus koreanus
- Author
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Kyung-Hoon Shin, Jae-Seong Lee, Hyuntae Choi, Yoseop Lee, Deok-Seo Yoon, Heum Gi Park, and Min-Chul Lee
- Subjects
0106 biological sciences ,0301 basic medicine ,Glycerol ,food.ingredient ,Physiology ,media_common.quotation_subject ,Longevity ,Rotifera ,Rotifer ,01 natural sciences ,Biochemistry ,Lecithin ,Choline ,Transcriptome ,03 medical and health sciences ,chemistry.chemical_compound ,food ,Animals ,Food science ,KEGG ,Molecular Biology ,media_common ,biology ,Chemistry ,010604 marine biology & hydrobiology ,Fatty Acids ,Lipid metabolism ,Brachionus ,Telomere ,biology.organism_classification ,Lipid Metabolism ,Cold Temperature ,030104 developmental biology - Abstract
Low-temperature exposure prolongs lifespans and changes lipid metabolism but the relationship between longevity and lipids is largely unknown. Here, we examine the relationship between longevity and lipid metabolism at low temperatures (20 °C and 15 °C) compared with a 25 °C control. Life parameters, fatty acid composition, and transcriptome changes were analyzed in the monogonont rotifer Brachionus koreanus. In vivo life-parameter data indicate that lifespan and fecundity exhibit opposite correlations at low temperatures. The amount of total fatty acids decreased significantly at low temperatures but areas stained with Nile red increased at 15 °C compared with the control. From RNA-seq–based transcriptional analysis, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway-enrichment analysis were conducted. GO analysis shows that telomeres were positively regulated at low temperatures. KEGG pathway-enrichment results indicate that gene expression involved in lipid metabolism was activated with increased glycerol and/or choline synthesis at low temperatures. We suggest that reduced reproductive rates are associated with a decrease of lecithin, which is involved in the conversion of glycerol to triacylglycerol in response to low temperatures by lowering the temperature of body fluid.
- Published
- 2020
44. Seasonal contrast of particulate organic carbon (POC) characteristics in the Geum and Seomjin estuary systems (South Korea) revealed by carbon isotope (δ
- Author
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Sujin, Kang, Jung-Hyun, Kim, Ji Hwan, Hwang, Yeon Sik, Bong, Jong-Sik, Ryu, and Kyung-Hoon, Shin
- Subjects
Carbon Isotopes ,Rivers ,Republic of Korea ,Seasons ,Estuaries ,Geum ,Carbon ,Environmental Monitoring - Abstract
In this study, we newly investigated surface water samples collected in two contrasting Korean estuary systems (i.e., closed Geum and open Seomjin estuaries) along a salinity gradient in winter (December) in 2016. The main objectives were to determine the source of particulate organic carbon (POC) in winter and to assess the environmental factors inducing seasonal differences in POC characteristics. Concentrations and dual carbon isotopes (δ
- Published
- 2020
45. Oxidative stress responses in brackish water flea exposed to microcystin-LR and algal bloom waters from Nakdong River, Republic of Korea
- Author
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Eun-Ji Won, Je-Won Yoo, Soyeon In, Dokyun Kim, Kyung-Hoon Shin, and Young-Mi Lee
- Subjects
0106 biological sciences ,Cyanobacteria ,Microcystis ,Microcystins ,Microcystin-LR ,Bioconcentration ,Microcystin ,010501 environmental sciences ,Aquatic Science ,Biology ,Oceanography ,01 natural sciences ,Algal bloom ,chemistry.chemical_compound ,Rivers ,Republic of Korea ,Animals ,Saline Waters ,Ecosystem ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Brackish water ,010604 marine biology & hydrobiology ,fungi ,Eutrophication ,biology.organism_classification ,Cladocera ,Pollution ,Acute toxicity ,Oxidative Stress ,chemistry ,Environmental chemistry ,Siphonaptera ,Marine Toxins - Abstract
Microcystis blooms and the impact of their toxins, particularly microcystin (MC), in coastal ecosystems is an emerging threat, but the species-specific effects of MC and the potential for bioconcentration are not fully understood. We exposed the brackish water flea, Diaphanosoma celebensis, to MC-LR, which showed antioxidant responses measured at the molecular to enzyme levels but no acute toxicity. We extended our experimental investigation to measure the released MC and its uptake by D. celebensis exposed to river water. In a short-term exposure (48 h) experiment, D. celebensis exposed to water from an algal bloom (approximately 2 μg L−1 MC) assimilated more than 50 pg MC per individual. The significant increase of MCs suggests the potential for the species to accumulate MCs. The dose-dependent increase in the antioxidant response observed in the mRNA levels also showed that D. celebensis exposed to diluted algal bloom waters were affected by toxins from cyanobacteria.
- Published
- 2020
46. Application of the newly developed nutrient diol index (NDI) as a sea surface nutrient proxy in the East Sea for the last 240 years
- Author
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Solbin Kim, Jung-Hyun Kim, Sang Han Lee, Kyu-Cheul Yoo, Jong-Ku Gal, and Kyung-Hoon Shin
- Subjects
010506 paleontology ,geography ,geography.geographical_feature_category ,Continental shelf ,Sediment ,010502 geochemistry & geophysics ,Atmospheric sciences ,01 natural sciences ,Proxy (climate) ,chemistry.chemical_compound ,Nutrient ,Nitrate ,chemistry ,Principal component analysis ,Environmental science ,Upwelling ,0105 earth and related environmental sciences ,Earth-Surface Processes - Abstract
We assessed the applicability of the nutrient diol index (NDI) as a proxy for sea surface nutrients by analyzing sediments from a box core (ES14-BC03) collected in the southwestern continental slope of the East Sea, or the Japan Sea (hereafter the East Sea). The estimated sedimentation rate based on the 210Pb chronology was 0.15 cm yr−1 over the last 240 yrs. The NDI-derived phosphate (0.69 μmol L−1) and nitrate (8.63 μmol L−1) concentrations for the core-top sediment were within the average phosphate (0.26 ± 0.08 μmol L−1) and nitrate (3.38 ± 2.32 μmol L−1) concentration ranges for the last ∼20 years, accounting for both estimation error and variation in observational data. The distributions of the NDI-diols varied slightly through time, grouping into two distinct clusters (Cluster 1 and Cluster 2) in both principle component analysis (PCA) and hierarchical clustering of principal components (HCPC). Cluster 2 represented a time period with higher relative abundances of the C28 and C30 1,14-diols, resulting in higher NDI-derived nutrient concentrations than those of other periods. Interestingly, during this period, the U 37 K ' -derived sea surface temperatures (SSTs) also decreased. These results indicate that higher surface nutrient conditions and colder SSTs occurred between 1884 CE and 1911 CE, which might be associated with stronger upwelling intensity at the study site. This study is the first application of the NDI to a down-core, demonstrating that the NDI can be a useful proxy that provides helpful information about past sea surface nutrient conditions.
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- 2019
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47. Characteristics of sediment affecting monomethylmercury accumulation in benthic fish of the Mekong Delta
- Author
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Seunghee Han, Nguyen Phuoc Dan, Dang Vu Bich Hanh, Viet Huu Nguyen, Eunji Jeong, Hyo-Jung Choi, and Kyung-Hoon Shin
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Delta ,Geologic Sediments ,Health, Toxicology and Mutagenesis ,chemistry.chemical_element ,010501 environmental sciences ,01 natural sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Rivers ,Tributary ,Animals ,Environmental Chemistry ,Methylmercury ,0105 earth and related environmental sciences ,Total organic carbon ,geography ,geography.geographical_feature_category ,Fishes ,Mercury ,04 agricultural and veterinary sciences ,Methylmercury Compounds ,040401 food science ,Food web ,Mercury (element) ,Vietnam ,chemistry ,Benthic zone ,Environmental chemistry ,Bioaccumulation ,Environmental science ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
The Mekong River Delta (Vietnam) is a flat, low-lying area formed by a dense network of main tributaries of the Tien and Hau Rivers, providing a nourishing habitat for aquatic organisms. A sediment survey of the total mercury (Hg), monomethylmercury (MMHg), and geochemical variables was carried out from the coast to 131 km upriver to establish an overview of the environmental factors affecting the bioaccumulation of Hg and MMHg in delta fish. The survey results revealed that the total Hg (12-90 ng g-1 ) and MMHg (0.014-1.5 ng g-1 ) concentrations were in the range of uncontaminated sediment. Statistical analysis using various geochemical factors demonstrated that sediment MMHg concentrations and fractions of MMHg over total Hg in sediment were higher at sites with higher total organic carbon (TOC) and total nitrogen sites. The current levels of TOC in Mekong Delta sediment are relatively low (0.2-1.5%); however, expanding dam constructions and aquacultures related to salinity intrusion are reinforcing the carbon burial rate by increasing the fine fractions. Based on the positive relationship found between MMHg and TOC in sediment, proper management efforts are necessary to reduce MMHg production in the Mekong River Delta sediment. Environ Toxicol Chem 2019;38:503-510. © 2018 SETAC.
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- 2019
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48. Current contamination status of traditional and emerging persistent toxic substances in the sediments of Ulsan Bay, South Korea
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Jihyun Cha, Yoonyoung An, Jong Seong Khim, Seongjin Hong, Kyung-Hoon Shin, and Seo Joon Yoon
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0106 biological sciences ,Geologic Sediments ,010604 marine biology & hydrobiology ,Sediment ,Diesel combustion ,010501 environmental sciences ,Aquatic Science ,Contamination ,Oceanography ,01 natural sciences ,Pollution ,chemistry.chemical_compound ,chemistry ,Dry weight ,Biomass combustion ,Environmental chemistry ,Republic of Korea ,Environmental science ,Pyrene ,Polycyclic Aromatic Hydrocarbons ,Bay ,Water Pollutants, Chemical ,0105 earth and related environmental sciences ,Potential toxicity ,Environmental Monitoring - Abstract
Contamination status of traditional and emerging persistent toxic substances (PTSs) in sediments and their major sources were investigated in Ulsan Bay, Korea. A total of 47 PTSs, including 15 traditional PAHs, ten styrene oligomers (SOs), six alkylphenols (APs), and 16 emerging PAHs (E-PAHs) were analyzed. Concentrations of traditional PAHs, SOs, and APs ranged from 35 to 1300 ng g−1 dry weight (dw), 30 to 3800 ng g−1 dw, and 30 to 430 ng g−1 dw, respectively. For the last 20 years, PTSs contamination in the bay area has been improved. However, 12 E-PAHs were widely detected in sediments, with a maximum of 240 ng g−1 dw (for benzo[e]pyrene) at the creek site. These E-PAHs seemed to originate from surrounding activities, such as biomass combustion, mobile sources, and diesel combustion. Due to environmental concerns for E-PAHs, further research on the potential toxicity, distribution, and behavior of these compounds should be implemented.
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- 2020
49. Trophic transfer of persistent toxic substances through a coastal food web in Ulsan Bay, South Korea: Application of compound-specific isotope analysis of nitrogen in amino acids
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Mungi Kim, Bohyung Choi, Yoonyoung An, Kyung-Hoon Shin, Youngnam Kim, Seongjin Hong, and Eun-Ji Won
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Food Chain ,010504 meteorology & atmospheric sciences ,Nitrogen ,Health, Toxicology and Mutagenesis ,010501 environmental sciences ,Toxicology ,01 natural sciences ,Republic of Korea ,Animals ,Amino Acids ,0105 earth and related environmental sciences ,Isotope analysis ,Trophic level ,Biodilution ,Nitrogen Isotopes ,Chemistry ,Fishes ,General Medicine ,δ15N ,Pollution ,Food web ,Rockfish ,Bays ,Environmental chemistry ,Whole food ,Bay ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Trophic magnification factor (TMF) of persistent toxic substances (PTSs: Hg, PCBs, PAHs, and styrene oligomers (SOs)) in a coastal food web (12 fish and four invertebrates) was determined in Ulsan Bay, South Korea. The nitrogen stable isotope ratios (δ15N) of amino acids [δ15NGlu−Phe based on glutamic acid (δ15NGlu) and phenylalanine (δ15NPhe)] were used to estimate the trophic position (TPGlu−Phe) of organisms. The TPGlu−Phe of organisms ranged from 1.64 to 3.69, which was lower than TP estimated by δ15N of bulk particulate organic matter (TPBulk: 2.46–4.21). Mercury and CB 138, 153, 187, and 180 were biomagnified through the whole food web (TMF > 1), while other PTSs, such as PAHs and SOs were not (biodilution of SOs firstly reported). In particular, the trophic transfer of PTSs was pronounced in the resident fish (e.g., rock bream, sea perch, Korean rockfish). Of note, CB 99, 101, 118, and 183 were additionally found to be biomagnifying PTSs in these species. Thus, fish residency appears to represent an important factor in determining the TMF of PTSs in the coastal environment. Overall, δ15NGlu−Phe provided accurate TPs of organisms and could be applied to determine the trophic transfer of PTSs in coastal food webs.
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- 2020
50. Biogeochemical signature of elevated methane in water column of the outer East Siberian Arctic Shelf
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Kyung-Hoon Shin, Dong-Hun Lee, Young Keun Jin, Yung Mi Lee, and Ji-Hoon Kim
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chemistry.chemical_compound ,Biogeochemical cycle ,Water column ,Oceanography ,chemistry ,Environmental science ,Signature (logic) ,Methane ,Arctic shelf - Abstract
The East Siberian Arctic Shelf (ESAS) had high methane concentrations in the seawater of the inner shelf over the decades, which was regarded as significant methane source for global warming. The source information of elevated dissolved methane at the inner ESAS has so far been reported, however, the characterizations (i.e., formation and transport) of enriched ones in the outer ESAS remain to date still unclear. To unravel this, we have reported methane properties along south-north transects of the outer ESAS (73.7°-77.1°N and 164.3°-178.0°E, water depths; 41-370m) performed from 2016, 2018 and 2019 ARAON Expeditions. The dissolved methane concentrations in surface seawater were mostly higher than those of the atmospheric equilibrium concentration and its maximum value in the water column of the outer ESAS hotspots had ca. 204 nM. Based on principal component analysis including CTD profiles (i.e., temperature, salinity, dissolved oxygen and fluorescence) and methane concentrations, elevated methane concentrations (88 to 204 nM) were close to fluorescence concentrations (0.1 to 0.4 mg/m3). Furthermore, the isotopic signatures of dissolved methane (δ13C; -66.6 to -26.6‰ and δD; -218.8 to -34.0‰) and dissolved inorganic carbon (δ13C; -10.1 to -4.4‰) showed large isotopic variations, indicating the methane production in the study area is likely to be complicated using carbon dioxide and methyl substrates. In this regard, organic matter preserved in the submerged permafrost and/or methyl compound produced by phytoplankton might be also potential substrates for elevated methane at some locations. In the near future, mass balance model via end-member approach will be applied for determining the discriminative contributions of possible methane sources in the outer ESAS.
- Published
- 2020
- Full Text
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