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We propose algorithms for efficient time integration of large systems of oscillatory second order ordinary differential equations (ODEs) whose solution can be expressed in terms of trigonometric matrix functions. Our algorithms are based on a residual notion for second order ODEs, which allows to extend the ``residual-time restarting'' Krylov subspace framework -- which was recently introduced for exponential and $\varphi$-functions occurring in time integration of first order ODEs -- to our setting. We then show that the computational cost can be further reduced in many cases by using our restarting in the Gautschi cosine scheme. We analyze residual convergence in terms of Faber and Chebyshev series and supplement these theoretical results by numerical experiments illustrating the efficiency of the proposed methods.

Rational Arnoldi is a powerful method for approximating functions of large sparse matrices times a vector. The selection of asymptotically optimal parameters for this method is crucial for its fast convergence. We present and investigate a novel strategy for the automated parameter selection when the function to be approximated is of Cauchy-Stieltjes (or Markov) type, such as the matrix square root or the logarithm. The performance of this approach is demonstrated by numerical examples involving symmetric and nonsymmetric matrices. These examples suggest that our black-box method performs at least as well, and typically better, as the standard rational Arnoldi method with parameters being manually optimized for a given matrix.