29 results on '"Kathryn Cook"'
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2. Environmental drivers of a decline in a coastal zooplankton community
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Seona R. Wells, Berit Rabe, Kathryn Cook, Peter J. Wright, Dafne Eerkes-Medrano, Eileen Bresnan, Daniel J. Mayor, and Margarita Machairopoulou
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Fishery ,Ecology ,Environmental science ,Aquatic Science ,Oceanography ,Zooplankton ,Ecology, Evolution, Behavior and Systematics - Abstract
Major changes in North Atlantic zooplankton communities in recent decades have been linked to climate change but the roles of environmental drivers are often complex. High temporal resolution data is required to disentangle the natural seasonal drivers from additional sources of variability in highly heterogeneous marine systems. Here, physical and plankton abundance data spanning 2003–2017 from a weekly long-term monitoring site on the west coast of Scotland were used to investigate the cause of an increasing decline to approximately -80± 5% in annual average total zooplankton abundance from 2011 to 2017. Generalized additive mixed models (GAMMs), with an autoregressive correlation structure, were used to examine seasonal and inter-annual trends in zooplankton abundance and their relationship with environmental variables. Substantial declines were detected across all dominant taxa, with ∼ 30–70% of the declines in abundance explained by a concurrent negative trend in salinity, alongside the seasonal cycle, with the additional significance of food availability found for some taxa. Temperature was found to drive seasonal variation but not the long-term trends in the zooplankton community. The reduction in salinity had the largest effect on several important taxa. Salinity changes could partly be explained by locally higher freshwater run-off driven by precipitation as well as potential links to changes in offshore water masses. The results highlight that changes in salinity, caused by either freshwater input (expected from climate predictions) or fresher offshore water masses, may adversely impact coastal zooplankton communities and the predators that depend on them.
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- 2021
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3. Opposite phenological responses of zooplankton to climate along a latitudinal gradient through the European Shelf
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Angus Atkinson, Fernando Villate, Arantza Iriarte, Kathryn Cook, Ibon Uriarte, and Alvaro Fanjul
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0106 biological sciences ,Geography ,Oceanography ,010504 meteorology & atmospheric sciences ,Ecology ,Phenology ,010604 marine biology & hydrobiology ,Aquatic Science ,01 natural sciences ,Zooplankton ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences - Abstract
Zooplankton phenological shifts may affect energy transfer through pelagic food web and up to fisheries, but few studies have compared zooplankton phenology across a wide latitudinal range of water temperatures. We examined the phenological variations of zooplankton at four sites along a latitudinal gradient from the Bay of Biscay [Bilbao and Urdaibai (BU)], the English Channel (Plymouth; L4), and the North Sea [Stonehaven (SH)] from 1999 to 2013. Zooplankton taxa showed interannual phenological variations that were opposite in direction between the southernmost BU and the northernmost SH sites. The East Atlantic pattern was the climate teleconnection best related to zooplankton phenological variations. Among local variables , salinity at BU was best related to phenological changes at BU as opposed to those at SH. Locally, chlorophyll a was most relevant at SH and temperature at L4. While we did see some imprints of temperature in causing expected directions of phenology shifts, i.e. towards earlier appearance of spring taxa and later appearance of autumn taxa in warm years, these patterns were by no means clear-cut. The dominant role of temperature in driving phenological variation suggested by some studies seems to be obscured by biotic and climatic controls acting differently along our environmental gradient.
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- 2021
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4. Vulval lichen sclerosus: An Australasian management consensus
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Ann Olsson, Lois Eva, Jacinta Opie, Gillian Marshman, Judith Cole, Michael J Sladden, Janice Yeon, Gayle Fischer, Amanda Oakley, Catherine Drummond, Priya Selva-Nayagam, Jennifer Bradford, Emma Veysey, Roderic J Phillips, Sarah E. Hill, Tania Day, Kathryn Cook, Kate DeAmbrosis, Linda Pepall, Helen Saunders, Sally Ball, Geoffrey Lee, and Tanja Gizela Bohl
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medicine.medical_specialty ,Consensus ,Best practice ,Population ,Dermatology ,Lichen sclerosus ,Vulvar Lichen Sclerosus ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,Chronic inflammatory skin condition ,medicine ,Humans ,Practice Patterns, Physicians' ,education ,Core set ,education.field_of_study ,business.industry ,medicine.disease ,Focus group ,Clinical Practice ,Lichen Sclerosus et Atrophicus ,030220 oncology & carcinogenesis ,Family medicine ,Anogenital region ,Practice Guidelines as Topic ,Female ,business ,Dermatologists - Abstract
Background/objectives: Vulval lichen sclerosus (VLS) is a chronic inflammatory skin condition predominantly affecting the anogenital region in women and children. To date, there is lack of agreement amongst experts on a severity scale to aid assessment, research and treatment stratification on VLS. Furthermore, literature on best practice for long-term management of VLS is lacking. The aim of this consensus is to provide broad guidelines on the short and long-term management of VLS. Methods: An initial focus group of Australasian experts in vulval dermatology developed a draft consensus statement for the management of VLS. Based on the results of the draft statement, a consensus panel of 22 Australasian experts, comprised of the initial and additional members, participated in an anonymous four-stage eDelphi process. Round 1 involved generation and voting on statements from the draft consensus statement developed by the focus group. In Rounds 2, 3 & 4, panel members were presented formal feedback from previous rounds and asked to indicate their level of agreement. Consensus was reached if there was ≥70% agreement on the importance of an item in the 4 (agree) to 5 (strongly agree) range. Results: The expert panel, with a total of 504 collective years of experience in the field of VLS, reached consensus on a core set of 51 management statements related to diagnosis, severity, initial and long-term management, follow-up, and complications of VLS. Conclusions: This study has identified a set of management statements for VLS that may be useful in clinical practice in the Australasian population.
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- 2021
5. Specialist dietetic input in the south wales NET clinic: Patient outcomes
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Khan, Kathryn Cook, Jennifer Blackhouse, Rebecca Taylor, Charlotte Dowd, and Catherine Powell
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medicine.medical_specialty ,business.industry ,Family medicine ,medicine ,business - Published
- 2020
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6. Being and Becoming Muslim: Religious Identification in 20th Century Indian Hyderabad
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Kathryn Cook Zyskowski
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- 2020
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7. Zooplankton seasonality across a latitudinal gradient in the Northeast Atlantic Shelves Province
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Alvaro Fanjul, Arantza Iriarte, Fernando Villate, Angus Atkinson, Kathryn Cook, and Ibon Uriarte
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0106 biological sciences ,Chlorophyll a ,010504 meteorology & atmospheric sciences ,biology ,010604 marine biology & hydrobiology ,Geology ,Aquatic Science ,Seasonality ,Oceanography ,biology.organism_classification ,medicine.disease ,01 natural sciences ,Zooplankton ,Latitude ,chemistry.chemical_compound ,chemistry ,Phytoplankton ,medicine ,Bay ,Copepod ,0105 earth and related environmental sciences ,Trophic level - Abstract
Zooplankton seasonality and its environmental drivers were studied at four coastal sites within the Northeast Atlantic Shelves Province (Bilbao35 (B35) and Urdaibai35 (U35) in the Bay of Biscay, Plymouth L4 (L4) in the English Channel and Stonehaven (SH) in the North Sea) using time series spanning 1999–2013. Seasonal community patterns were extracted at the level of broad zooplankton groups and copepod and cladoceran genera using redundancy analysis. Temperature was generally the environmental factor that explained most of the taxa seasonal variations at the four sites. However, between-site differences related to latitude and trophic status (i.e. from oligotrophic to mesotrophic) were observed in the seasonality of zooplankton community, mainly in the pattern of taxa that peaked in spring-summer as opposed to late autumn-winter zooplankton, which were linked primarily to differences in the seasonal pattern of phytoplankton. The percentage of taxa variations explained by environmental factors increased with latitude and trophic status likely related to the increase in the co-variation of temperature and chlorophyll a, as well as in the increase in regularity of the seasonal patterns of both temperature and chlorophyll a from south to north, and of chlorophyll a with trophic status. Cladocerans and cirripede larvae at B35 and U35, echinoderm larvae at L4 and decapod larvae at SH made the highest contribution to shape the main mode of seasonal pattern of zooplankton community, which showed a seasonal delay with latitude, as well as with the increase in trophic status.
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- 2018
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8. Latitude, distance offshore and local environmental features as modulators of zooplankton assemblages across the NE Atlantic Shelves Province
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Miguel Artiach, Ibon Uriarte, Kathryn Cook, Fernando Villate, Angus Atkinson, Arantza Iriarte, and Alvaro Fanjul
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Oceanography ,Ecology ,Environmental science ,Submarine pipeline ,Aquatic Science ,Zooplankton ,Ecology, Evolution, Behavior and Systematics ,Latitude - Abstract
Contribution of latitude, distance offshore and environmental factors to variations in zooplankton assemblages across the Northeast Atlantic Shelves Province, from the Bay of Biscay [Bilbao 35 (B35) and Urdaibai 35 (U35)] to the English Channel (Plymouth L4; L4) and the North Sea (Stonehaven; SH), were assessed mainly by redundancy analysis. For coarse zooplankton groups latitude explained the main between-site differences, and meroplankton contributed more than holoplankton. Latitudinal differences were best indicated by contrasting abundances of cirripede larvae and doliolids (most abundant at the lowest latitude sites) and bryozoan and polychaete larvae (most abundant at the highest latitude site). Doliolids were best indicators of temperature-mediated latitudinal differences. The interaction between latitude and distance offshore or salinity and phytoplankton biomass explained smaller percentages of the variability. The main differences in copepod and cladoceran genera reflected the oceanic influence, with highest presence of Corycaeus and Oncaea at L4, likely related to the higher influence of off-shelf water intrusions, and neritic Acartia dominating at SH, U35 and B35. Podon and Evadne, which decreased from south to north, reflected latitude-related differences driven more by salinity than by temperature. Instances where a single species (e.g. Acartia clausi) dominated showed common relationships with temperature, consistent with a common thermal niche. Differences in co-generic species dominance between sites depicted the latitudinal gradient.
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- 2018
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9. Zooplankton variability at four monitoring sites of the Northeast Atlantic Shelves differing in latitude and trophic status
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Arantza Iriarte, Kathryn Cook, Alvaro Fanjul, Fernando Villate, Ibon Uriarte, and Angus Atkinson
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Ecology ,010604 marine biology & hydrobiology ,Aquatic Science ,01 natural sciences ,Zooplankton ,Latitude ,Taxon ,Nutrient ,Oceanography ,Abundance (ecology) ,Environmental science ,Dominance (ecology) ,Bay ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,Trophic level - Abstract
Zooplankton abundance series (1999–2013) from the coastal sites of Bilbao 35 (B35), Urdaibai 35 (U35), Plymouth L4 (L4) and Stonehaven (SH), in the Northeast Atlantic were compared to assess differences in the magnitude of seasonal, interannual and residual scales of variability, and in patterns of seasonal and interannual variation in relation to latitudinal location and trophic status. Results showed highest seasonal variability at SH consistent with its northernmost location, highest interannual variability at U35 associated to an atypical event identified in 2012 in the Bay of Biscay, and highest residual variability at U35 and B35 likely related to lower sampling frequency and higher natural and anthropogenic stress. Interannual zooplankton variations were not coherent across sites, suggesting the dominance of local influences over large scale environmental drivers. For most taxa the seasonal pattern showed coherent differences across sites, the northward delay of the annual peak being the most common feature. The between-site seasonal differences in spring–summer zooplankton taxa were related mainly to phytoplankton biomass, in turn, related to differences in latitude or anthropogenic nutrient enrichment. The northward delay in water cooling likely accounted for between-site seasonal differences in taxa that increase in the second half of the year.
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- 2017
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10. Completing colored graphs to meet a target property
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R. Sritharan, Kathryn Cook, Xiaoqiang Wang, and Elaine M. Eschen
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Discrete mathematics ,Block graph ,Applied Mathematics ,010102 general mathematics ,Interval graph ,0102 computer and information sciences ,Computer Science::Computational Geometry ,Clique graph ,01 natural sciences ,Combinatorics ,Indifference graph ,Pathwidth ,Computer Science::Discrete Mathematics ,010201 computation theory & mathematics ,Chordal graph ,Circular-arc graph ,Mathematics::Metric Geometry ,Discrete Mathematics and Combinatorics ,Split graph ,0101 mathematics ,Mathematics - Abstract
We consider the problem of deciding whether a k-colored graph can be completed to have a given property. We establish that, when k is not fixed, the completion problems for (Helly) circular-arc graphs, even (Helly) proper or (Helly) unit circular-arc graphs, are NP-complete. When k is fixed, in the case of completion to a (Helly) circular-arc graph, (Helly) proper circular-arc graph, or (Helly) unit circular-arc graph we fully classify the complexities of the problems. We also show that deciding whether a 3-colored graph can be completed to be strongly chordal can be done in O(n2) time. As a corollary of our results, the sandwich problems for Helly circular-arc graphs, Helly proper circular-arc graphs, and Helly unit circular-arc graphs are NP-complete.
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- 2017
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11. Are simple environmental indicators of food web dynamics reliable: Exploring the kittiwake–temperature relationship
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Kathryn Cook, Dafne Eerkes-Medrano, Robert J. Fryer, and Peter J. Wright
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Ecology ,010604 marine biology & hydrobiology ,General Decision Sciences ,Climate change ,Biology ,biology.organism_classification ,01 natural sciences ,Food web ,Predation ,Ecological indicator ,Abundance (ecology) ,Kittiwake ,Calanus ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,Trophic level - Abstract
This study examined the inter-relationships between kittiwake breeding success and sandeel abundance, Calanus copepods, chlorophyll and temperature. The validity of past proxies of sandeel prey (Calanus and temperature) suggested in the literature was also examined. Winter temperature was not found to be a reliable indicator of the abundance of sandeel or lower trophic levels, although the present study did support past evidence for a dependence of kittiwake breeding success on local sandeel abundance as, with the exception of two years, there was a linear relationship with log age-0 sandeel abundance. The abundance of sandeel was positively linked to the dates of predicted peak egg abundance in C. finmarchicus and C. helgolandicus. This supported earlier evidence that the match with prey timing is important to sandeel recruitment. Neither Calanus species was associated with temperature in the February to March period nor in the April–May period, which may explain the lack of a temperature effect that propagates through the trophic levels. Consequently, although kittiwake breeding success appears to show some sensitivity and specificity to changes in their prey, this responsiveness was not found to extend to the lowest trophic level (Calanus abundance) or to temperature. As such kittiwake breeding success was not a reliable indicator of climate-driven changes in the local food web.
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- 2017
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12. Corrigendum to: Opposite phenological responses of zooplankton to climate along a latitudinal gradient through the European Shelf
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Fernando Villate, Ibon Uriarte, Arantza Iriarte, Angus Atkinson, Kathryn Cook, and Alvaro Fanjul
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Oceanography ,Ecology ,Phenology ,Environmental science ,Aquatic Science ,Zooplankton ,Ecology, Evolution, Behavior and Systematics - Published
- 2021
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13. First record of the copepod Eurytemora herdmani in the Firth of Forth, Scotland
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Malcolm Charles Baptie, Kathryn Cook, and Rosemary Jayne Foster
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0106 biological sciences ,geography ,Chlorophyll a ,geography.geographical_feature_category ,biology ,010604 marine biology & hydrobiology ,Biodiversity ,Estuary ,Aquatic Science ,Oceanography ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Zooplankton ,Salinity ,Fishery ,chemistry.chemical_compound ,Firth ,chemistry ,Abundance (ecology) ,Ecology, Evolution, Behavior and Systematics ,Copepod - Abstract
The copepod Eurytemora herdmani, native to coastal waters of the north-west Atlantic and north Pacific Oceans, was discovered at a marine sampling station in the Firth of Forth, Scotland, UK. The species was present in the summer zooplankton assemblage over three successive years. Peak abundance followed peak chlorophyll a concentration in surface waters. Given that previous studies on the Firth of Forth had only found species native to Europe, a survey of the Forth estuary was undertaken in summer 2014. Eurytemora herdmani was found at sampling stations where the salinity was greater than 20, while Eurytemora affinis was found at sampling stations with lower salinity further upstream. The impact of this introduction on the native zooplankton community is not known, and will require further study. The Firth of Forth has a high level of shipping traffic, and this species may have been introduced by ships’ ballast water.
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- 2016
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14. Seasonality of the plankton community at an east and west coast monitoring site in Scottish waters
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Steve Hay, Pamela Walsham, Lynda Webster, S.L. Hughes, Eileen Bresnan, Kerry Smith, and Kathryn Cook
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Freshwater inflow ,biology ,Calanus finmarchicus ,fungi ,Aquatic Science ,Plankton ,Spring bloom ,Oceanography ,biology.organism_classification ,Zooplankton ,Fishery ,Ceratium ,Phytoplankton ,Environmental science ,Bloom ,Ecology, Evolution, Behavior and Systematics - Abstract
This study presents the first comparative description of the physics, nutrients and plankton communities at two Scottish monitoring sites between 2003 and 2012; Stonehaven on the east coast of Scotland and Loch Ewe on the west coast. This description provides baseline information about the diversity of the plankton community in Scottish waters to support assessment of the plankton community for the EU Marine Strategy Framework Directive. Spring time temperatures at Loch Ewe were approximately 2 °C higher and the median secchi depth was almost 1 m greater than at Stonehaven during this period. Freshwater inflow from the river Ewe may promote water column stability at Loch Ewe. These factors may account for the earlier spring bloom observed at the Loch Ewe monitoring site. The seasonality of chlorophyll ‘a’ at Loch Ewe was typical of stratified waters in temperate regions with a strong spring/autumn peak attributed to increased numbers of diatoms whilst dinoflagellates dominated during the summer. At Stonehaven highest concentrations of chlorophyll were recorded between May and June and the autumn diatom bloom was considerably less than in Loch Ewe. A higher biomass of zooplankton grazers was found at Loch Ewe than at Stonehaven. Pseudocalanus was the dominant copepod at both sites, particularly during the spring period. Zooplankton carnivores were also more abundant at Loch Ewe than at Stonehaven and were dominated by cnidarians. Considerable interannual variability was observed in cnidarian abundance and diversity at both sites. Variation in the abundance of Ceratium, Calanus finmarchicus and Calanus helgolandicus at both sites followed similar trends in other time series suggesting that the plankton communities at Stonehaven and Loch Ewe are responding to large scale environmental influences.
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- 2015
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15. Improving documentation of oral chemotherapy doses in a pediatric oncology clinic
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Christine M. Smith, Debra L. Friedman, Laura Hall, Kathryn Cook, Barron L. Patterson, and Monroe Carell
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Pediatrics, Perinatology and Child Health - Published
- 2019
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16. Implementing online problem based learning (PBL) in postgraduates new to both online learning and PBL: An example from strength and conditioning
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Kathryn Cook, Michael J. Duncan, and Mike Smith
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Multimedia ,Online participation ,Process (engineering) ,Online learning ,Sports science ,Employability ,computer.software_genre ,Focus group ,Education ,Problem-based learning ,Tourism, Leisure and Hospitality Management ,Constructivism (philosophy of education) ,ComputingMilieux_COMPUTERSANDEDUCATION ,Mathematics education ,Psychology ,computer - Abstract
Recent research has focused on the development of effective online problem based learning (PBL). However, there is a need for research to examine experiences of online PBL in those new to online learning. This study used a single module blended approach to examine the student experience of online PBL in a group of postgraduates new to online learning. This employed one problem scenario for each group (four students per group) as the central component of the module. Asynchronous discussion boards were used to facilitate the learning process with other forms of delivery used as appropriate. Focus group interviews revealed that students believed online PBL developed skills related to employability and information retrieval/evaluation. Online PBL was seen as beneficial for developing ideas and critiquing information. However, the artificial nature of the discussion board space was a barrier for some students, as was anxiety about online participation in the PBL tasks.
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- 2013
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17. The Acute Effect of a Caffeine-Containing Energy Drink on Mood State, Readiness to Invest Effort, and Resistance Exercise to Failure
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Michael G. Smith, Kathryn Cook, Rob S. James, and Michael J. Duncan
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Adult ,Male ,medicine.medical_specialty ,Adolescent ,Weight Lifting ,Physical Therapy, Sports Therapy and Rehabilitation ,Athletic Performance ,Placebo ,Bench press ,Young Adult ,chemistry.chemical_compound ,Double-Blind Method ,Caffeine ,medicine ,Energy Drinks ,Humans ,Ingestion ,Orthopedics and Sports Medicine ,Exertion ,Rating of perceived exertion ,Cross-Over Studies ,Resistance Training ,General Medicine ,Crossover study ,Affect ,Mood ,chemistry ,Physical Endurance ,Physical therapy ,Central Nervous System Stimulants ,Psychology - Abstract
The efficacy of caffeine ingestion in enhancing aerobic performance is well established. The evidence for caffeine's effects on resistance exercise is mixed and has not fully examined the associated psychological and psychophysiological changes. This study examined acute effects of ingesting a caffeine-containing energy drink on repetitions to failure, the rating of perceived exertion (RPE), and the readiness to invest physical effort (RTIPE) and mental effort during resistance exercise to failure. Thirteen resistance-trained men took part in this double-blind, randomized cross-over experimental study whereby they ingested a caffeinated (179 mg) energy drink or placebo solution 60 minutes before completing a bout of resistance exercise comprising bench press, deadlift, prone row, and back squat exercise to failure at an intensity of 60% 1-repetition maximum. Experimental conditions were separated by at least 48 hours. Participants completed significantly greater repetitions to failure, irrespective of exercise, in the energy drink condition (p = 0.015). Rating of perceived exertion was significantly higher in the placebo condition (p = 0.02) and was significantly higher during lower-body exercises compared with upper-body exercises irrespective of the substance ingested (p = 0.0001). Readiness to invest mental effort was greater with the energy drink condition (p = 0.04), irrespective of time. A significant time × substance interaction (p = 0.036) for RTIPE indicated that RTIPE increased for both placebo and energy drink conditions preingestion to pre-exercise, but the magnitude of increase was greater with the energy drink condition compared with placebo. This resulted in higher RTIPE postexercise for the energy drink condition. These results suggest that acute ingestion of a caffeine-containing energy drink can enhance resistance exercise performance to failure and positively enhance psychophysiological factors related to exertion in trained men.
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- 2012
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18. End of century ocean warming and acidification effects on reproductive success in a temperate marine copepod
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Daniel J. Mayor, Neil R. Everett, and Kathryn Cook
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Ecology ,Reproductive success ,Effects of global warming on oceans ,Global warming ,Climate change ,Ocean acidification ,Aquatic Science ,Biology ,biology.organism_classification ,Oceanography ,Calanus ,Seawater ,Ecology, Evolution, Behavior and Systematics ,Copepod - Abstract
We examined how predicted end of century ocean warming and acidification scenarios affected the incidence of apoptosis in the eggs and nauplii of the copepod Calanus helgolandicus. Offspring viability was not affected by 1000 ppm CO2-acidified seawater, whereas the effects of 2 and 4°C warming were dependent upon the batch of eggs used; warming increased viability in the second batch. This context-dependency highlights the need for cautious interpretation and application of data from individual climate-change studies.
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- 2012
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19. Absorption efficiencies and basal turnover of C, N and fatty acids in a marine Calanoid copepod
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Barry Thornton, Alain F. Zuur, Thomas R. Anderson, Pamela Walsham, Ursula Witte, Daniel J. Mayor, and Kathryn Cook
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chemistry.chemical_classification ,Protein turnover ,Fatty acid ,Biology ,biology.organism_classification ,Eicosapentaenoic acid ,Isotopic signature ,chemistry ,Docosahexaenoic acid ,Ecological stoichiometry ,Botany ,Food science ,Ecology, Evolution, Behavior and Systematics ,Copepod ,Polyunsaturated fatty acid - Abstract
Summary 1. Marine copepods of the genus Calanus can reproduce prior to the spring bloom in the absence of sufficient food. Their starvation physiology, and hence the factors limiting their pre-bloom population growth (egg production), remain poorly understood. 2. Stoichiometric theory can provide insights into the factors controlling an organism’s growth and the fate of elements in an ecosystem. It is underpinned by substrate utilization efficiencies that relate to key physiological processes such as absorption efficiencies (AEs) and biomass turnover. These parameters are seldom investigated, particularly in the case of essential ‘micronutrients’ such as the polyunsaturated fatty acids (PUFAs), eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA). 3. Calanus spp. were fed briefly and subsequently starved for 5 days to determine basal turnover rates of biomass carbon, nitrogen and essential PUFAs. The effect of short-term fasting on nitrogen isotope signatures was also examined. The elemental, fatty acid and isotopic composition of their faecal pellets were compared to that of their food, providing insights into AEs and digestive isotopic discrimination. 4. Gut AEs typically followed the sequence: PUFA > nitrogen > carbon, although low AE for DHA was a notable exception. Starvation-induced losses of carbon, nitrogen, EPA and DHA demonstrate that homeostatic organisms must ingest all of these substrates in substantial quantity to achieve positive net growth. 5. Egested material was significantly depleted in 13C and 15N relative to the ingested food. We attribute this to isotopic discrimination at the macromolecular level, indicating that food quality contributes to the isotopic signature of a consumer organism. Values of δ15N in the copepods’ tissues did not increase during starvation, despite significant losses of bulk nitrogen. This supports the suggestion that dissimilatory protein pathways in marine crustaceans are non-discriminating. 6. The significant basal turnover rates and variable AEs for essential PUFAs and nitrogen presented herein demonstrate that organisms cannot be assumed to utilize all nutritious substrates with the same, high efficiency, even when scarce in the diet. Our data highlight the need for a more detailed understanding of organismal physiology before isotopic and stoichiometric models can be meaningfully constructed and parameterized.
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- 2010
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20. 2K2 vertex-set partition into nonempty parts
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Elaine M. Eschen, Luerbio Faria, Simone Dantas, Sulamita Klein, Kathryn Cook, and Celina M. H. de Figueiredo
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Vertex (graph theory) ,Discrete mathematics ,Vertex cover ,Neighbourhood (graph theory) ,Complete bipartite graph ,Theoretical Computer Science ,Combinatorics ,Indifference graph ,Computer Science::Discrete Mathematics ,Chordal graph ,Discrete Mathematics and Combinatorics ,Maximal independent set ,Feedback vertex set ,Mathematics - Abstract
A graph is 2K"2-partitionable if its vertex set can be partitioned into four nonempty parts A, B, C, D such that each vertex of A is adjacent to each vertex of B, and each vertex of C is adjacent to each vertex of D. Determining whether an arbitrary graph is 2K"2-partitionable is the only vertex-set partition problem into four nonempty parts according to external constraints whose computational complexity is open. We establish that the 2K"2-partition problem parameterized by minimum degree is fixed-parameter tractable. We also show that for C"4-free graphs, circular-arc graphs, spiders, P"4-sparse graphs, and bipartite graphs the 2K"2-partition problem can be solved in polynomial time.
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- 2010
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21. CO2-induced acidification affects hatching success in Calanus finmarchicus
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Kathryn Cook, Ceri Matthews, Daniel J. Mayor, Alain F. Zuur, and Steve Hay
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Biomass (ecology) ,Ecology ,Hatching ,Calanus finmarchicus ,Ocean acidification ,Aquatic Science ,Biology ,biology.organism_classification ,chemistry.chemical_compound ,Oceanography ,chemistry ,Carbon dioxide ,Seawater ,Ecology, Evolution, Behavior and Systematics ,Overwintering ,Copepod - Abstract
Bottle incubations were conducted to examine how exposure to seawater containing 8000 ppm carbon dioxide (CO2; pH 6.95) influenced the growth and reproduction of the keystone copepod Calanus finmarchicus. The chosen concentration of CO2 is expected to occur over 100s of cubic kilometres of seawater as a result of marine CO2 storage/disposal, and is also representative of the predicted ‘worst-case’ atmospheric CO2 scenario in the year 2300. Growth (egg production and biomass loss) in adult female copepods was not affected by the simulated ocean acidification. In contrast, a maximum of only 4% of the eggs successfully yielded nauplii after 72 h in the experimental treatment. Our results demonstrate that environmental risk assessments for marine CO2 storage/disposal must look beyond adult mortality as an endpoint. Furthermore, if CO2 is to be disposed of in the deep sea, the location and timing of such activities must take into consideration the overwintering populations of C. finmarchicus.
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- 2007
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22. Contributing factors to muscle weakness in children with cerebral palsy
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Geoffrey C B Elder, Geoff Stewart BSc, Kathryn Cook PT, Derek Weir MSc, Arthur Marshall, and Lorne Leahey
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Developmental Neuroscience ,Pediatrics, Perinatology and Child Health ,Neurology (clinical) - Published
- 2007
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23. Measuring Internet Marketing Productivity: A Study of Fortune 1,000 Companies
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W. Benoy Joseph, Kathryn Cook, and Robert W. Cook
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Digital marketing ,business.industry ,Multiple criteria ,Marketing communication ,Business ,Marketing ,Nationwide survey ,Productivity - Abstract
How productive is Internet marketing? Results of a nationwide survey show that only 52 percent of Internet marketing users have specific, measurable objectives with the most popular being mechanical or communication measures. Even though multiple criteria are common, fewer than one in six firms use financial productivity measures.
- Published
- 2014
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24. Comparison of the epipelagic zooplankton samples from a U-Tow and the traditional WP2 net
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Graeme C. Hays and Kathryn Cook
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Oceanography ,Ecology ,Abundance (ecology) ,Pelagic zone ,Aquatic Science ,Plankton ,Biology ,Relative species abundance ,Zooplankton ,Ecology, Evolution, Behavior and Systematics - Abstract
The performance of a new mesozooplankton sampler, the U-Tow, was compared to that of the traditional WP2 net. The U-Tow significantly underestimated species abundance, but gave a very good representation of species composition and community size structure. WP2 net samples could be used to calibrate the U-Tow, allowing absolute abundance to be determined. It is recommended that the U-Tow, in its current configuration, be used in conjunction with WP2 net samples to give measures of abundance, or as a tool to identify areas of change in plankton communities.
- Published
- 2001
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25. The Edge. Interview
- Author
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Kathryn Cook, Renea Henry, and Joan Wallach Scott
- Subjects
Cultural Studies ,Gender Studies - Published
- 1997
- Full Text
- View/download PDF
26. Completing Colored Graphs to Meet a Target Property
- Author
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R. Sritharan, Kathryn Cook, Xiaoqiang Wang, and Elaine M. Eschen
- Subjects
Combinatorics ,Property (philosophy) ,Corollary ,Chordal graph ,Computer science ,Colored graph ,Unit (ring theory) ,Algorithm ,Graph - Abstract
We consider the problem of deciding whether a k-colored graph can be completed to have a given property. We establish that, when k is not fixed, the completion problem for circular-arc graphs, even unit or proper circular-arc graphs, is NP-complete. When k is fixed, in the case of completion to circular-arc graphs and Helly circular-arc graphs, we fully classify the complexities of the problems. We also show that deciding whether a 3-colored graph can be completed to be strongly chordal can be done in O(n 2) time. As a corollary of our results, the sandwich problem for Helly circular-arc graphs is NP-complete.
- Published
- 2013
- Full Text
- View/download PDF
27. Attendance and Achievement in Problem-based Learning: The Value of Scaffolding
- Author
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Michael G. Smith and Kathryn Cook
- Subjects
Scaffold ,education ,Attendance ,hemic and immune systems ,chemical and pharmacologic phenomena ,Academic achievement ,Education ,Problem-based learning ,Brainstorming ,Mathematics education ,Time management ,Psychology ,Value (mathematics) ,Inclusion (education) - Abstract
The impact of problem-based learning (PBL) in improving academic achievement compared with other forms of teaching is equivocal. This paper argues that poor tutorial preparation and vague reporting of the brainstorming stage of PBL are major contributing factors. To address these issues this study incorporated a scaffolding mechanism into the pre-tutorial brainstorming stage of the PBL process based on de Bono’s (1995) Six Thinking Hats. Results confirmed that pre-tutorial preparation, when measured by attendance and academic achievement, increased across all levels of the undergraduate program for the PBL groups that used scaffolding, when compared to PBL groups without scaffolding and lecture-based delivery groups. This study supports the inclusion of scaffolding during the brainstorming stage of PBL.
- Published
- 2012
- Full Text
- View/download PDF
28. Identifying high-functioning dyslexics: is self-report of early reading problems enough?
- Author
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S. Hélène Deacon, Kathryn Cook, and Rauno Parrila
- Subjects
Adult ,Male ,Adolescent ,media_common.quotation_subject ,Population ,Psycholinguistics ,Education ,Developmental psychology ,Dyslexia ,Speech and Hearing ,Fluency ,Young Adult ,Phonological awareness ,Phonetics ,Reading (process) ,Surveys and Questionnaires ,medicine ,Humans ,education ,media_common ,education.field_of_study ,Language Tests ,Awareness ,medicine.disease ,Comprehension ,Reading comprehension ,Reading ,Female ,Self Report ,Psychology - Abstract
We used a questionnaire to identify university students with self-reported difficulties in reading acquisition during elementary school (self-report; n=31). The performance of the self-report group on standardized measures of word and non-word reading and fluency, passage comprehension and reading rate, and phonological awareness was compared to that of two other groups of university students: one with a recent diagnosis (diagnosed; n=20) and one with no self-reported reading acquisition problems (comparison group; n=33). The comparison group outperformed both groups with a history of reading difficulties (self-report and diagnosed) on almost all measures. The self-report and diagnosed groups performed similarly on most tasks, with the exception of untimed reading comprehension (better performance for diagnosed) and reading rate (better performance for self-report). The two recruitment methods likely sample from the same underlying population but identify individuals with different adaptive strategies.
- Published
- 2011
29. Evaluation of unmeshed and 1:1 meshed AlloDerm bolsters for stapled rectal anastomoses in a porcine model
- Author
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Barry Starcher, James W. Fleshman, Kathryn Cook, S. Hunt, David B. Stewart, Juan Perrone, Margaret M. Frisella, Dongli Mao, and Richard A. Pierce
- Subjects
Skin, Artificial ,medicine.medical_specialty ,Sutures ,business.industry ,Swine ,Anastomosis, Surgical ,Rectum ,Area of interest ,Anastomosis ,Prosthesis Design ,Matrix Metalloproteinases ,Surgery ,Elastin ,Random Allocation ,Postoperative Complications ,Medicine ,Animals ,Female ,Collagen ,business - Abstract
The major morbidity of colorectal anastomoses is leaks. The concept of staple-line reinforcement is a growing area of interest. In this study, we evaluated the feasibility and effect of utilizing AlloDerm to bolster end-to-end stapled rectal anastomoses in a porcine model.A total of 30 female 45-kg domestic pigs were studied, and each served as its own control by creating a bolstered and unbolstered anastomosis in each animal. All anastomoses were created with a 29-mm end-to-end stapling device. Bolstered anastomoses were randomized to proximal and distal positions along the rectum, and each rectorectal anastomosis was separated by an average of 10 cm. In 20 pigs, an unmeshed bolster of a 0.5-0.7-mm thickness was used. The remaining 10 pigs had a 1:1 meshed bolster that was 0.34-0.51 mm thick. The animals were survived for 14 days. Barium enemas were then performed and the two anastomotic sites harvested, and each anastomosis underwent burst testing. The internal diameter of each anastomosis was measured and a biochemical analysis was performed for matrix metalloproteinase (MMP), elastin and collagen content.The unmeshed bolstered anastomoses burst fewer times than the unbolstered anastomoses (P=0.004) and had higher burst pressures (P=0.023), though their anastomotic circumferences were smaller (P=0.007). Meshed bolsters offered no strength advantage to anastomoses and were significantly (P=0.009) smaller than unbolstered anastomoses in the same animal. No difference in elastin, collagen, or MMP content was observed between bolstered and unbolstered groups. No animals had clinical or radiographic leaks.The routine use of unmeshed and 1:1 meshed AlloDerm bolsters is safe and does not appear to inhibit healing in elective colorectal surgery on healthy subjects. AlloDerm may have a role as a tissue bolster in select patients who are more prone to develop anastomotic leaks.
- Published
- 2008
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