592 results on '"Karlik A"'
Search Results
2. Production of Nutraceuticals Using Plant Cell and Tissue Culture
- Author
-
Elif Karlik and Elif Aylin Ozudogru
- Published
- 2023
3. Insights into the amorphous calcium carbonate (ACC) → ikaite → calcite transformations
- Author
-
Anett Lázár, Zsombor Molnár, Attila Demény, László Kótai, László Trif, Kende Attila Béres, Eszter Bódis, Gábor Bortel, László Előd Aradi, Máté Karlik, Máté Zoltán Szabó, Áron Pekker, Gergely Németh, Katalin Kamarás, Laurence A. J. Garvie, and Péter Németh
- Subjects
General Materials Science ,General Chemistry ,Condensed Matter Physics - Abstract
Ikaite formation and its transformation to calcite occurs via distinct amorphous calcium carbonates (referred to as I and II) that differ in their morphology, particle size, water content and stability.
- Published
- 2023
4. Diclofenac and dexamethasone modulate the effect of cannabidiol on the rat colon motility ex vivo
- Author
-
Magdalena Chłopecka, Łukasz Kiraga, Kijan Crowley, Michał Jank, Urszula Latek, Marta Mendel, and Wojciech Karlik
- Subjects
General Veterinary - Abstract
Introduction Due to the growing interest in the use of cannabinoids in supportive therapies, they are increasingly used together with anti-inflammatory drugs. Cannabinoids inhibit gastrointestinal motility, while steroidal and nonsteroidal anti-inflammatory drugs influence motility in other ways. The aim of the research was to study the interactions between cannabidiol (CBD) and these two classes of anti-inflammatory drugs in the context of gastrointestinal motility. Dexamethasone (DEX) was selected as a steroidal drug and diclofenac (DCF) as a nonsteroidal counterpart. Material and Methods The experiments were performed on isolated rat colon strips in isometric conditions. The contractile response to acetylcholine (ACh) (1 μM) was measured with no substance applied as a control value and was measured after application of CBD (80 μM), DEX (100 μM), DCF (100 μM), or a combination of these substances. Results Cannabidiol strongly inhibited intestinal motility mediated by ACh application, DCF inhibited it non-significantly, while DEX intensified it. When CBD was co-administered with DEX, the combination inhibited intestinal motility non-significantly relative to the ACh-only control. Co-administration of CBD with DCF inhibited motility more than when these substances were administered separately. Conclusion Inhibition of the intestinal response to ACh is likely due to the synergistic effect of CBD and endogenous cannabinoids. Dexamethasone lessened the inhibitory effect of CBD, likely because of diminished availability of the arachidonic acid necessary for endogenous cannabinoid synthesis. However, diclofenac may increase endogenous cannabinoid synthesis, because of the greater availability of arachidonic acid caused by DCF blocking the cyclooxygenation pathway.
- Published
- 2023
5. Ikaite (CaCO3*6H2O) -> ACC (amorphous calcium carbonate) -> calcite transformation and its paleoclimatological implication
- Author
-
Anett Lázár, Máté Karlik, Zsombor Molnár, Attila Demény, and Péter Németh
- Abstract
Ikaite (CaCO3*6H2O) is a cryogenic calcium carbonate phase, which forms below about 5°C. If the temperature increases above 5-7 °C ikaite transforms to calcite. Understanding the transformation process is important to interpret paleoclimatological data from glendonites, i.e., calcite pseudomorphs after ikaite in sediments. Tollefsen et al. (2020) suggested that the transformation occurs via a coupled dissolution–reprecipitation mechanism at the ikaite–calcite interface (1). In contrast, Vickers et al. (2022) proposed a quasi-solid state ikaite to calcite transformation mechanismand suggested that stable isotope data of glendonite can be used for reconstructing paleotemperatures(2). However, in sediments the majority of the ikaite to calcite transformation occurs in diagenetic environments, where ambient solutions interact with the transforming mineral.We synthesized ikaite at 2 °C in alkaline environment in order to study its transformation using organic solvents, vacuum pumping and rapid (1 min) heating from 5 to 30 °C. These experiments indicated the formation of amorphous calcium carbonate (ACC) during the ikaite to calcite transition. We also monitored the ikaite transformation by letting the 2 °C parent solution to reach room temperature (25 °C) within ~5 hours. We observed ACC and calcite formations depending on the alkalinity of the parent solution. Our experiments suggest that the ikaite to calcite transition is a two-step process consisting of the solid-state ikaite → ACC transformation and the ACC → calcite dissolution–reprecipitation mechanisms. During these transitions ikaite lost all its water but preserved its original morphology. We hypothesize that the occurrence of a transient amorphous phase during the ikaite to calcite transition implies the alteration of the isotopic data, similar to what was reported for the ACC to calcite transition (3).We acknowledge the financial support of NKFIH ANN141894 grant. References:(1) E. Tollefsen, T. Balic-Zunic, C. M. Mörth, V. Brüchert, C. C. Lee and A. Skelton, Scientific Reports, 2020, 10, 8141.(2) M. L.Vickers, M. Vickers, R. E. M. Rickaby, H. Wu, S. M. Bernasconi, C. V. Ullmann, G. Bohrmann, R. F. Spielhagen, H. Kassens, B. P. Schultz, C. Alwmark, N. Thibault and C. Korte, Geochimica et Cosmochimica Acta, 2022, 334, 201-216.(3) A. Demény, Gy. Czuppon, Z. Kern, Sz. Leél-Őssy, A. Németh, M. Z. Szabó M. Tóth, C.-C. Wu, C.-C. Shen, M. Molnár, T. Németh, P. Németh and M. Óvári, Quaternary International, 2016, 415, 25-32.
- Published
- 2023
6. Studying Soil Organic Matter Composition in Arable land: Can Soil Management Impact Carbon Pools?
- Author
-
Thulfiqar Al-Graiti, Gergely Jakab, Noémi Ujházy, Károly Márialigeti, Tamás Árendás, Máté Karlik, and Zoltán Szalai
- Abstract
Soil organic matter (SOM) is an essential fraction of soil and contributes to its fertility. Land use and cultivation may affect SOM. This study investigates whether SOM concentration and composition differ in soil pools or are changed by soil management (tillage, fertilisations, and crop covers). Soil samples were collected in April 2019 from cropland and nearby grassland. The study sites were part of a long-term experiment in Martonvasar (Hungary), established in 1958 and characterised by Chernozem soils. Total organic carbon (TOC) contents and compounds were studied in three soil pools (bulk soil, fast pool, and slow pool). Both TOC and total N concentrations were high in the slow pool, with higher stored C contents in grassland than in cropland. Tillage effects reduced aggregate stability in cropland, which explains a lower aliphatic content than grassland. Insufficient physical protection due to the tillage practice may enhance OM loss in cropland even under fertiliser inputs. Neither fertiliser nor crop covers affected SOM compositions, while they were different in soil pools. More complex OM in the slow pool than in the fast pool. It indicates that the slow pool is the main protecting path for SOM, possibly referred to older or decayed organic compounds. To understand the bottom-up process, microorganisms’ community role in SOM stabilisation needs to be studied.
- Published
- 2023
7. The Main Trends in the Development of Corporate Governance Through the Prism of Domestic and Foreign Experience
- Author
-
Zh. A. Bekpayeva, N. V. Nikiforova, and M. A. Karlik
- Abstract
The prerequisite for studying the topic was that the topic of corporate governance is relevant, especially in our turbulent, unstable times. This is confirmed by the interest shown by authors from various countries. In the literature review subsection, articles on corporate governance by various authors from the Scopus database were studied. From the point of view of the authors, the activity of any organization depends on many different external and internal factors, such as the competence of management, the qualifications of employees, the availability of financial and labor resources for business development. Through the application of the methodology and methods of classical science, the goals of writing the article are revealed: the article presents a concise history of the development of corporate governance in the international and domestic markets in a convenient form, identifies the main three theories of corporate governance, and identifies differences in the codes of various countries in tabular form. The article confirms the information that underestimation of the importance of corporate governance can lead to several losses in the company, the impossibility of implementing the strategy, and inefficient use of resources: material, intellectual, labor, and financial. An assessment of the positive impact of the corporate management system as a whole on the company’s efficiency is given. The results of the study can be applied in building a corporate management system for companies, regardless of the form of ownership and the number of employees. The topic of corporate governance is especially relevant in the current realities.
- Published
- 2022
8. Hyponastic Leaves 1 interacts with RNA Pol II to ensure proper transcription of microRNA genes
- Author
-
Dawid Bielewicz, Jakub Dolata, Mateusz Bajczyk, Lukasz Szewc, Tomasz Gulanicz, Susheel S Bhat, Anna Karlik, Monika Jozwiak, Artur Jarmolowski, and Zofia Szweykowska-Kulinska
- Subjects
Physiology ,Cell Biology ,Plant Science ,General Medicine - Abstract
HYL1 (DRB1) is a double-stranded RNA binding protein involved in miRNA processing in plants. It is a core component of the Microprocessor complex and enhances the efficiency and precision of miRNA processing by the DCL1 protein. In this work, we report a novel function of the HYL1 protein in the transcription of MIR genes. HYL1 colocalizes with RNA Polymerase II and affects its distribution along MIR genes. Moreover, proteomic experiments revealed that the HYL1 protein interacts with many transcription factors. Finally, we show that the action of HYL1 is not limited to MIR genes and impacts the expression of many other genes, a majority of which are involved in the plastid organization. These discoveries indicate HYL1 as an additional player in gene regulation at the transcriptional level, independent of its role in miRNA biogenesis.
- Published
- 2023
9. Women’s collegiate soccer coaching in the United States: exploring barriers and challenges
- Author
-
Sarah Karlik and Mitch Wolden
- Subjects
Cultural Studies ,Sociology and Political Science ,Social Psychology - Published
- 2022
10. İnsan Endojen Retrovirüslerin Kanserle Olan İlişkisinin İncelenmesi
- Author
-
Abdullah KARAMAN and Elif KARLIK
- Subjects
General Medicine - Abstract
Transpozonlar, genomdaki yerlerini değiştirebilme özelliğine sahip olan hareketli DNA parçalarıdır. Transpozonlar genomdaki yer değiştirme işlemini, transpozisyon olarak adlandırılan bir mekanizma ile gerçekleştirmekte ve sahip oldukları transpozisyon mekanizmasına göre DNA ve RNA transpozonları olarak iki alt sınıfa ayrılmaktadırlar. Retrotranspozonlar olarak da adlandırılan RNA transpozonları, insanın evrim sürecinde önemli rol alan endojen retrovirüsleri (ERV) içermektedir. İnsan genomunun yaklaşık %8’ini oluşturan insan endojen retrovirüsleri (HERV) 3 sınıf altında toplanmakta olup ikinci sınıfta yer alan insan endojen retrovirüs K (HERV-K), insan genomuna yakın sayılabilecek bir zamanda entegre olan, insan genomundaki en aktif HERV’dir. HERV-K’nın gen anlatım analizleri incelendiğinde, ovaryum, meme ve deri kanseri gibi çeşitli kanser türlerinin ortaya çıkmasında HERV-K’nın rol aldığı görülmektedir. HERV’lerin kanser gelişimi ile olan ilişkisi uzun süredir araştırılmaktadır. Kanser hücrelerinde HERV proteinleri saptanmış olsa da HERV’lerin kanser gelişimindeki rolü kesin olarak anlaşılamamıştır. Son dönemde yapılan çalışmalar kanser hücrelerinde yüksek seviyede anlatım yaptığı gösterilen HERV proteinlerinin, kanser tedavisinde rol alan immün yanıt için ana hedef olarak kullanılabileceğini ortaya koymaktadır. Histon deasetilaz inhibitörleri ve kontrol noktası inhibitörlerinin kombinasyonundan oluşan yeni yaklaşımlar da kanser tedavisinde kullanılmak üzere test edilmektedir. HERV anlatımı, interferon tip 1 yanıtını etkinleştiren, sitozoldeki tek iplikli RNA’nın kalıp tanıma reseptörlerini aktive ederek immün sistem yanıtını başlatmaktadır. Bunun sonucunda CD8 T hücreleri tarafından gerçekleştirilen kanser hücresi tanınması arttırılarak kanser gelişiminin engellenebileceği öngörülmektedir. Histon deasetilaz ve kontrol noktası inhibitörlerinin kombinasyonundan meydana gelen bu yeni yaklaşım, anti-tümör aktivitesini arttırarak kanser tedavisinde yeni bir umut oluşmasına olanak sağlayacaktır.
- Published
- 2022
11. The Novel Role of hnRNP UL1 in Human Cell Nucleoli
- Author
-
Marlena Cichocka, Anna Karlik, Patrycja Plewka, Kishor Gawade, Agata Stępień, Patrycja Świergiel, Ankur Gadgil, and Katarzyna Dorota Raczyńska
- Subjects
DNA Repair ,Transcription, Genetic ,Nuclear Proteins ,Cell Biology ,DNA, Ribosomal ,Applied Microbiology and Biotechnology ,Heterogeneous-Nuclear Ribonucleoproteins ,X-ray Repair Cross Complementing Protein 1 ,Humans ,DNA Breaks, Double-Stranded ,Molecular Biology ,Cell Nucleolus ,Ecology, Evolution, Behavior and Systematics ,Transcription Factors ,Developmental Biology - Abstract
hnRNP UL1 plays an important role in cell nuclei, where it is recruited to DNA damage sites and is involved in the repair of DNA double-strand breaks. Furthermore, this protein is known as a transcriptional repressor of RNA polymerase II genes. In the present study, we have shown that hnRNP UL1 is also localized in the nucleoli of human cells. Upon investigating its function, we found that hnRNP UL1 stimulates ribosomal DNA (rDNA) gene transcription. Moreover, we observed that cells with hnRNP UL1 silencing exhibited increased sensitivity to DNA damage. We also showed that hnRNP UL1 interacts with γH2A.X, RPA32, XRCC1, and Chk1 in cell nucleoli, suggesting its involvement in the repair of rDNA damage.
- Published
- 2022
12. List of contributors
- Author
-
Danúbia Rodrigues Alves, Deepika Antil, Geleta Dugassa Barka, Udita Basu, Purva Bhalothia, Eveline Teixeira Caixeta, Isabel Samila Lima Castro, Reeti Chaudhary, Dênia Pires de Almeida, Sameer Dixit, Swathi Ghantasala, Farinaz Jafari Ghods, Elif Karlik, Amandeep Kaur, Muhammad Ramzan Khan, Feng Kong, Raju Kuiry, Upendra Kumar, null Madhu, Laura Medina-Puche, Shefali Mishra, Bhagath Kumar Palaka, Swarup K. Parida, Katrina M. Ramonell, Nazia Rehman, Swarup Roy Choudhury, José S. Rufián, Nelam Sajjad, Yasir Sharif, Alok Sharma, Neha Sharma, Pradeep Sharma, Priya Sharma, Renu Sharma, Akancha Shukla, Akanchha Shukla, null Shumayla, Sadhana Singh, Shivi Tyagi, Santosh Kumar Upadhyay, Ira Vashisht, Kalpesh Yajnik, and Madiha Zaynab
- Published
- 2023
13. Roles of plant receptor-like kinases in response to abiotic stress
- Author
-
Elif Karlik
- Published
- 2023
14. Tensor robust principal component analysis of lightning images: butterfly effect of blackholes
- Author
-
Yilmaz, M. Fatih, Karlik, Bekir, and Yilmaz, Ferhat
- Subjects
Physics - General Physics ,General Physics (physics.gen-ph) ,FOS: Physical sciences - Abstract
Tensor robust principal component analysis (robust PCA) has been applied to the lightning images. Robust PCA aims to classify the images into low-rank and sparse components. The low rank and sparse components correspond to static background separation and the dynamic (lightning) part of the images correspondingly. After classification, Singular Value Decomposition (SVD) unfold technique has been applied to sparse tensor, which transforms the tensor to spatial-temporal spaces in the form of vector matrixes. Spectral evolution shows the evolution of the polarization of the UV-Vis spectra. The contour maps of 2D energy density plots reveal the zero-point energy fluctuations of the bosons, fermions, and virtual matters from early to late stages. Detection of such fluctuations in the early stages can help to remote sensing of the lightning. 3D vector(ether) field representation of the sparse tensor of the brightest lightning reveals the butterfly effect of the black holes with the signatures of flapping. There is a correlation between the approximate entropy and the chaos trends of the 3D vector field analyzed by the Lyapunov exponent. In the brightest frame, the fractal dimension measures 0.8004, which is close to the Fibonacci Hamiltonian.
- Published
- 2023
- Full Text
- View/download PDF
15. Blockchain Technologies in the Perspective of Industrial Development: The Research Challenge
- Author
-
Aleksandr E. Karlik, Vladimir V. Platonov, Elena A. Iakovleva, and Georgy I. Spiridonov
- Published
- 2023
16. Natural and anthropogenic impacts reflected by paleoclimate proxy parameters in a lake-forest system in Bukovina, Romania
- Author
-
Máté Karlik, Anna Vancsik, Zoltán Szalai, Marcel Mîndrescu, Ionela Grădinaru, Sándor Vágási, Gábor Bozsó, and József Fekete
- Subjects
Geography (General) ,paleoclimate ,Geography, Planning and Development ,deforestation ,landscape change ,G1-922 ,General Earth and Planetary Sciences ,n-alkanes ,weathering index ,temperature reconstruction - Abstract
The research area is located in the Eastern Carpathians, Romania. This region is rich in various formations and indicates significant potential for paleo-environmental reconstruction. The present research was carried out on sediment cores collected at lake Bolătău-Feredeu, Feredeului Mountains (Eastern Carpathians, Romania). Preliminary examination of the sediment confirmed the possibility for data analysis with high temporal resolution. The aim of the research was to clarify and supplement the findings of previous research at this site, to explore the relationships between proxy parameters and to elucidate the cause for the changes. Core dating was carried out using 210Pb and radiocarbon isotopes and indicated that sediment cores span the past 500 years. The research uses a wide range of methodologies, including organic geochemistry with calculated n alkane indices (Phw and Pwax). Based on these proxies, the changes of woody and herbaceous coverage in the catchment can be estimated. Moreover, element concentration, weathering indices and particle size distribution assist to detect climate changes in the catchment area. The data and conclusions yielded by the analysis were compared with the regional modelled temperature profile, based on which five periods were separated. In addition to natural and anthropogenic events, the main factor among the natural processes is the change in annual temperature. Based on the obtained data, several parameters were found to be suitable for monitoring past temperature changes.
- Published
- 2021
17. Manevi Danışmanlık ve Rehberlikte Kriz Terapisinin Temelleri
- Author
-
Zeynep KARLIK
- Abstract
Bu makalenin amacı, manevi danışmanlık ve rehberlikte kriz ile mücadele sürecinde uygulanabilecek Tanrı imgesini danışmanlığa dâhil eden yöntemleri incelemektir. Bu bağlam doğrultusunda kriz danışmanlığında psikolojik danışmanlıktan farklı olarak müdahalede zamanın kısıtlı olması nedeniyle etik durum, kişilikle olan ilişki, manevi danışmanın rolü ve danışmanlık sürecinin sonunda danışanı bekleyen durumlar ele alınmaktadır. Tanrı imgesi; kültür, aile ve toplum tarafından etkiye uğradığı gibi kişinin dini inanç ve yaşam deneyimlerinden de etkilenmektedir. Tanrı imgesinin gelişimi hakkında Harms, Goldman, Elkind ve Fowler gibi bilim insanlarının teorilerinin olduğu bilinmektedir. Tanrı imgelerinin özellikle kriz durumlarında hayata yeniden tutunmak için potansiyel güç işlevi gören sığınma ve bir dinlenme yeri olduğu düşünüldüğü zaman, bu imgelerin kriz danışmanlığına dâhil edilmesi önemli görülmektedir. Buna karşılık bu imge doğru oluşturulmadığı zaman bireye dayanak olmak yerine kişinin durumunu daha da zor bir hale getirmektedir. Bu bağlam doğrultusunda yapılan çalışmalarda psikodinamik teknik, ilişkisel maneviyat tekniği ve aşkınlık tekniği kullanılmaktadır. Manevi yönelimli psikodinamik teknik, danışanın Tanrı imajının ‘an’a getirilmesini ve bu imajın çözümlenmesini amaçlamaktadır. İlişkisel maneviyat tekniğinde de Tanrı imgesi ile kurulan ilişki danışmanlıkta konumlandırılmaktadır. Her iki teknikte de danışanların mevcut imgesi ile ihtiyacı olan Tanrı imgesi dengelenmeye çalışılmaktadır. Aşkınlık tekniğinde ise danışanın tüm bu imgelerin ötesine taşınması hedeflenmektedir. Aşkın Tanrı imgesinin, danışanın sınırlarında çözemediği problemleri aşmasını ve onun gelişiminin gerçekleşmesini sağlayacak bir katalizör etkisi gösterdiği düşünülmektedir. Dolayısıyla makalenin amacı manevi danışmanlık ve rehberlikte kriz danışmanlığı paralelinde Tanrı imgelerinin kullanıldığı danışmanlık modellerini incelemektir. Tanrı imgelerinin keşfi ve onların dönüştürülmesi, manevi danışmanlık ve rehberlikte kriz danışmanlığında en güncel metotlardan birisi olarak kabul görmektedir. Çünkü bu yöntem aile kökenli sorunlara, kişiler arası çözülmemiş narsistik eksikliklere veya biyokimyasal sorunlara odaklanmak yerine Tanrı’nın tanımlanmamış görüntülerinin varlığını dinlemek için bir fırsat sunmaktadır. Zira bu süreçte kişinin derin yatırımlar yaptığı “Tanrı/Tanrıları” kişiyi hayal kırıklığına uğratmış olabilmektedir. Ancak bu durum, yeni ve daha değerli imgelerin ortaya çıkması için bir fırsat olarak düşünülmektedir.
- Published
- 2022
18. Review of: 'Numeric Structure of Genetic Code in Natural Evolution: Energy Grounds'
- Author
-
Elif Karlik
- Published
- 2022
19. Principles for Landscape Water Conservation
- Author
-
John Karlik
- Published
- 2022
20. Microstructure evolution of iron precipitates in (Fe, He)-irradiated 6H-SiC: A combined TEM and multiscale modeling
- Author
-
N. Daghbouj, A.T. AlMotasem, J. Vesely, B.S. Li, H.S. Sen, M. Karlik, J. Lorinčík, F.F. Ge, L. Zhang, V. Krsjak, O. Laguta, M. Callisti, and T. Polcar
- Subjects
Nuclear and High Energy Physics ,Nuclear Energy and Engineering ,General Materials Science - Published
- 2023
21. Topic: AS01-Diagnosis/AS01a-Cytomorphology: ARTIFICIAL INTELLIGENCE MAY HELP THE HEMATOPATHOLOGIST IN EVALUATION OF BONE MASS AND CELLULARITY IN BONE MARROW SPECIMENS OF PATIENTS WITH MDS
- Author
-
A. Kolomansky, E. Cohen Karlik, R. Malka, M. Rahamim, S. Kislev, J. Ben-Ezra, S. Shahar, A. Globerson, D. Neumann, M. Mittelman, and H. Oster
- Subjects
Cancer Research ,Oncology ,Hematology - Published
- 2023
22. PIONEERING in vitro STUDIES FOR CALLUS FORMATION OF Colchicum chalcedonicum Azn
- Author
-
Elif Karlik, Erdal Üzen, Meltem Değer, Nermin Gozukirmizi, İstinye Üniversitesi, Sağlık Hizmetleri Meslek Yüksekokulu, Eczane Hizmetleri Bölümü, and Karlik, Elif
- Subjects
Colchicum ,Sucrose ,Callus formation ,Resistance ,Corm ,colchicum chalcedonicum ,Conservation ,Colchicum chalcedonicum,Tissue Culture,Callus Formation,Conservation ,Chemical-Constituents ,chemistry.chemical_compound ,Tissue culture ,Alkaloids ,Callus Formation ,callus formation ,Colchicum chalcedonicum ,Tissue Culture ,tissue culture ,lcsh:Science (General) ,biology ,Didderent Parts ,fungi ,conservation ,Plant ,Sterilization (microbiology) ,biology.organism_classification ,Horticulture ,Genetik ve Kalıtım ,chemistry ,Callus ,Genetics and Heredity ,lcsh:Q1-390 ,Explant culture - Abstract
Colchicum calcedonicum Azn, pek çok endemik bitki türünün görüldüğü Türkiye'de yayılış gösteren endemik türlerden biridir. Toprak altında uzun-oval şekilli soğanı ile genellikle 3-4 yapraklıdır. Kallus kültürü kullanarak endemik türlerin in vitro üretimi, bu türlerin korunmasında umut verici bir çalışma haline gelmiştir. Bu çalışmanın amacı, in vitro C. chalcedonicum üretimi için verimli kallus protokolünün oluşturulabilmesidir. Explantların sterilizasyonunda, 20 dk %0.25 (w/v) cıva klorür (HgCl2) kullanılmıştır. Cıva klorüre ilaveten, yüzey sterilizasyonunda 30 dk boyunca Tween 80, %6,5 NaCl ile birlikte kullanılmıştır. Bu çalışmada, 19 farklı besiyeri kullanılmış olup primer kallus oluşumu 2,4-D (2 mg L-1), 2IP (0,5 mg L-1), %3 sükroz ve %0,05 aktif karbon içeren Murashige & Skoog bazal besiyerinde elde edilmiştir. Çalışmamız, aktif karbon kullanımının primer kallus oluşumunda etkili olduğunu göstermiştir. Bu çalışma, C. chalcedonicum’un primer kallus oluşumu için ilk rapordur. Bununla birlikte, çalışmamız endemik tür olan C. chalcedonicum'un in vitro korunması ve kallus oluşum protokolünün geliştirilmesinde öncü bir çalışmadır., Colchicum calcedonicum Azn is one of the endemic species distributed in Turkey, where many endemic plant species occur. It has long-oval shaped corm under the soil, and usually 3-4 leaves on it. In vitro production of endemic species using callus culture has become promising study for conservation. The aim of this study is to generate an efficient callus protocol for in vitro production of C. chalcedonicum. To sterilize the explants, 0.25% (w/v) mercuric chloride (HgCl2) was used for 20 min. In addition to mercuric chloride, surface sterilization was conducted by using 6.5% NaCl with Tween 80 for 30 min. We used 19 different mediums and the primary callus formation was obtained in Murashige & Skoog’s basal medium (MS) supplemented with 2,4-D (2 mg L-1), 2IP (0.5 mg L-1), 3% sucrose and 0.05% active carbon. Our study demonstrated the active carbon usage was effective for the primary callus formation. This study is the first report for primary callus formation of C. chalcedonicum. However, our work is a pioneering study to improve callus formation protocol system for in vitro conservation of endemic species C. chalcedonicum.
- Published
- 2020
23. Phytogenic Compounds for Enhancing Intestinal Barrier Function in Poultry–A Review
- Author
-
Marta Mendel, Magdalena Chłopecka, Wojciech Karlik, and Urszula Latek
- Subjects
0301 basic medicine ,Pharmaceutical Science ,Social pressure ,Poultry ,Analytical Chemistry ,03 medical and health sciences ,Intestinal mucosa ,Phytogenics ,Drug Discovery ,medicine ,Animals ,media_common.cataloged_instance ,Intestinal Mucosa ,European union ,Barrier function ,media_common ,Pharmacology ,Intestinal permeability ,Gut barrier ,business.industry ,Organic Chemistry ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,Poultry farming ,medicine.disease ,Animal Feed ,040201 dairy & animal science ,Anti-Bacterial Agents ,Biotechnology ,030104 developmental biology ,Complementary and alternative medicine ,Molecular Medicine ,business - Abstract
After the European Union ban of antibiotic growth promoters, works on different methods of improving gut health have intensified. The poultry industry is struggling with problems that were previously controlled by antibiotic growth promoters, therefore the search for optimal solutions continues. Simultaneously, there is also increasing social pressure to minimize the use of antibiotics and replace them with alternative feed additives. A variety of available alternatives is considered safe by consumers, among which phytogenics play a significant role. However, there are still some limitations that need to be considered. The most questionable are the issues related to bioavailability, metabolism of plant derivatives in birds, and the difficulty of standardizing commercial products. There is still a need for more evidence-based recommendations for the use of phytogenics in livestock. On the other hand, a positive influence of phytogenic compounds on the health of poultry has been previously described by many researchers and practical application of these compounds has auspicious perspectives in poultry production. Supplementation with phytogenic feed additives has been shown to protect birds from various environmental threats leading to impaired intestinal barrier function. Phytogenic feed additives have the potential to improve the overall structure of intestinal mucosa as well as gut barrier function on a molecular level. Recognition of the phytogenicsʼ effect on the components of the intestinal barrier may enable the selection of the most suitable ones to alleviate negative effects of different agents. This review aims to summarize current knowledge of the influence of various phytogenic constituents on the intestinal barrier and health of poultry.
- Published
- 2021
24. Marka Kökeninin Reklama Yönelik Güven ve Tutum Üzerindeki Etkisi: Tüketici Etnosentrizminin, Kozmopolitanizminin ve Ksenosentrizminin Rolü
- Author
-
V. Özlem AKGÜN, Tuğçe SANCI, and Selahattin Onur KARLIK
- Abstract
Pazarlama sınırlarının her geçen gün genişlediği yoğun değişim ortamında, markalara yönelik güven ve sadakat, markaların başarısını etkilemektedir. Bu güven duygusunun altında sosyolojik unsurlar yatabilmektedir. Yeniçağın da gerektirdiği şekilde, pazarlama faaliyetlerini müşteri odaklı hale getirmek için bu sosyolojik unsurların incelenmesi önem arz etmektedir. Bu bağlamda, bu çalışmanın temel amacı, marka orijininin reklama yönelik tutum ve güven üzerindeki etkisinde, sosyoloji temelli kavramlar olan tüketici etnosentrizminin, ksenosentrizminin ve kozpolitanizminin rolünün incelenmesidir. Bu amaca yönelik olarak, çalışmada 2x2 gruplar arası deneysel tasarım dizayn edilmiştir. Bu nedenle, Türkiye ve Fransa kökenli olmak üzere iki farklı reklam görselinin yer aldığı iki ayrı anket ile 237 üniversite öğrencisinden veri toplanmıştır. Çalışmanın sonuçlarına göre, tüketici etnosentrizmi ve tüketici ksenosenterizminin boyutlarından algılanan yetersizlik, marka orijini ile reklama yönelik tutum ve güven arasındaki ilişkide düzenleyici bir etkiye sahiptir. Fakat tüketici kozmopolitanlığının ve tüketici ksenosentrizminin boyutlarından sosyal yüceltmenin söz konusu ilişkide düzenleyici bir etkiye sahip olmadığı sonucuna ulaşılmıştır. Çalışmanın yazına ve pazarlama uygulayıcılarına katkı sağlaması beklenmektedir.
- Published
- 2022
25. An autonomous debating system
- Author
-
Tamar Lavee, Daniel Hershcovich, Slava Shechtman, Yoav Katz, Guy Moshkowich, Shai Gretz, Yonatan Bilu, Ran Levy, Charles Jochim, Michal Jacovi, Lilach Edelstein, Assaf Toledo, Ariel Gera, Artem Spector, Eyal Shnarch, Aya Soffer, Benjamin Sznajder, Carlos Alzate, Ruty Rinott, Orith Toledo-Ronen, Noam Slonim, Dalia Krieger, Dan Gutfreund, Yosi Mass, Lili Kotlerman, Ranit Aharonov, Liat Ein-Dor, Dafna Sheinwald, Leshem Choshen, Dan Lahav, Amir Menczel, Ben Bogin, David Konopnicki, Yoav Kantor, Shay Hummel, Elad Venezian, Shachar Mirkin, Ilya Shnayderman, Ron Hoory, Roni Friedman-Melamed, Lena Dankin, Martin Gleize, Roy Bar-Haim, Francesca Bonin, Ella Rabinovich, Matan Orbach, Zvi Kons, Alon Halfon, Yufang Hou, Shila Ofek-Koifman, Naftali Liberman, Edo Cohen-Karlik, and Assaf Gavron
- Subjects
Competitive Behavior ,Multidisciplinary ,Artificial Intelligence System ,Human intelligence ,02 engineering and technology ,Computational argumentation ,Dissent and Disputes ,Artificial Intelligence ,Argument ,020204 information systems ,Research community ,Political science ,0202 electrical engineering, electronic engineering, information engineering ,Humans ,Human Activities ,020201 artificial intelligence & image processing ,Engineering ethics ,Architecture ,Natural Language Processing ,Grand Challenges - Abstract
Artificial intelligence (AI) is defined as the ability of machines to perform tasks that are usually associated with intelligent beings. Argument and debate are fundamental capabilities of human intelligence, essential for a wide range of human activities, and common to all human societies. The development of computational argumentation technologies is therefore an important emerging discipline in AI research1. Here we present Project Debater, an autonomous debating system that can engage in a competitive debate with humans. We provide a complete description of the system’s architecture, a thorough and systematic evaluation of its operation across a wide range of debate topics, and a detailed account of the system’s performance in its public debut against three expert human debaters. We also highlight the fundamental differences between debating with humans as opposed to challenging humans in game competitions, the latter being the focus of classical ‘grand challenges’ pursued by the AI research community over the past few decades. We suggest that such challenges lie in the ‘comfort zone’ of AI, whereas debating with humans lies in a different territory, in which humans still prevail, and for which novel paradigms are required to make substantial progress. An artificial intelligence system that can engage in a competitive debate with humans is presented.
- Published
- 2021
26. Soil organic matter gain by reduced tillage intensity: Storage, pools, and chemical composition
- Author
-
Gergely Jakab, Balázs Madarász, Malihe Masoudi, Máté Karlik, Csilla Király, Dóra Zacháry, Tibor Filep, Igor Dekemati, Csaba Centeri, Thulfiqar Al-Graiti, and Zoltán Szalai
- Subjects
Soil Science ,Agronomy and Crop Science ,Earth-Surface Processes - Published
- 2023
27. Különleges 'gagát' gyöngy egy különleges késő rézkori sírból
- Author
-
Mária Bondár, Attila Démény, Péter Németh, Máté Karlik, Krisztián Fintor, and Mária Tóth
- Subjects
Archeology - Abstract
2005-ben Somogy megyében autóút építését megelőző nagyfelületű ásatáson, Balatonlelle határában két késő rézkori csontvázas sír került elő. Mindkét sírban az elhunyton kívül további koponyák maradványait is megtalálták. A 415. sírba temetett 8–9 éves gyermek csuklóján csaknem tiszta rézből készült pántkarperec, a nyakán szerves anyagból kialakított fekete, gagát jellegű gyöngy, és egy kalapált lemezgyöngy volt az edénymellékleteken kívül. A temetkezési mód és az analógia nélküli ékszermellékletek arra utalnak, hogy a sírba különleges státuszú gyereket temettek. A DNS elemzés rokonságot is ki tudott mutatni az elhunyt fiú és a sírjába tett egyes koponyamaradványok között. A fekete gyöngyöt kombinált optikai mikroszkópos, röntgenfluoreszcens spektroszkópos (XRF), pásztázó elektronmikroszkópos, Fourier transzformációs infravörös spektroszkópos (FTIR) és stabilizotóp-geokémiai vizsgálatoknak vetettük alá. A gyöngy könnyű, hálózatosan repedezett anyag, ami meglehetősen törékeny és a törési felület fényes, kagylós törést mutat. A belső szerkezet csiszolt felületen hosszúkás, irányított pórusokat mutat, a szénült fa szerkezetéhez hasonlóan. Az XRF elemzések a szilikátok alárendelt mennyiségét jelzik, így a szervesanyag-dús üledékes kőzet (pala) kizárható. A szakirodalomban gagátnak (angolul jet) nevezett minta FTIR spektruma jelentősen különbözik az ismert gagát/jet előfordulásokétól, viszont erősen hasonlít a karbon korú kőszenekhez, különösen a francia és spanyol előfordulásokhoz. A stabilhidrogén- és -szénizotóp- összetételek a leginkább a karbon korú szenekhez állnak közel, a helyi és a közeli regionális szenek, valamint a speciális képződési környezetet jelentő gagát (jet) előfordulások elvethetőek forrásanyagként. Az adatok együttesen legvalószínűbb forrásként a spanyol vagy francia karbon korú szenekre utalnak, mint potenciális forráskőzetre. Mindazonáltal további szisztematikus gyűjtés és elemzések szükségesek a „gagát” gyöngy eredetének feltárására.
- Published
- 2021
28. Manevi Danışmanlık ve Rehberlikte Kriz Danışmanlığı Yaklaşımları
- Author
-
Zeynep KARLIK and Naci KULA
- Abstract
Bu makalenin amacı, krizin anlamına ve kriz ile mücadele yaklaşımlarına yönelik psikoloji ve manevi danışmanlık perspektifinden değerlendirmeler yapmaktır. Ayrıca manevi danışmanın alet çantasında olması gereken yöntem ve pratikler de incelenmiştir. Bu kapsamda ayrıca kriz terapilerinin klinik psikoloji ve manevi danışmanlık ve rehberlik literatürü açısından incelendiği bu makale, manevi danışmanlık ve rehberlik uygulamalarına kuramsal katkıda bulunmayı hedefleyen teorik bir çalışmadır. Manevi danışmanlık ve rehberlik psikolojik danışmanlıktan farklı olarak bireyin hastalık, sakatlık, yaşlılık ya da doğal afetler nedeniyle yaşadığı krizlerle mücadelede kaybedilen kontrol duygusunun yeniden kazandırılması için gerekli desteğin dini ve manevi referansları kullanarak gerçekleştirilmesidir. Benzer şekilde klinik psikoloji de insanın sağaltımı için çaba sarf eder. Ancak bu seküler modeller Tanrı’dan bağımsız olarak farklı kültür ve inançtaki insanların hayatı anlamlandırmaları aynı kabul edilerek bireyi anlamaya çalışmaktadır. Psikanalitik kuram olayları nesnelere bağlarken bilişsel terapiler içe dönerek davranışların öznesini yeniden keşfetmiştir. Yaşamın ilk yıllarında önemli kişilerle geçirilen yaşantılar sonucunda gelişen bu şemalar, stresli olaylarla karşılaşıldığında aktifleşir ve kestirme metot ve yollar sunarak tepkisini belirler. McIntosh ile din de bir bilişsel şema olarak kabul edilmiştir. Dinin en temel şeması her dinin ve bireyin kendine özgü Tanrı tasavvurunu tanımlayan Tanrı şemasıdır. Bu şemanın olumlu olmaması durumunda krizlerden Tanrı’yı sorumlu tutma, terk edildiğini düşünme ve Tanrı’nın ceza verici olarak algılanmasından dolayı suçluluk duygusu gibi negatif duygular tetiklenebilir. Makale boyunca manevi danışmanlıkta kriz danışmanlığı uygulamaları, Tanrı tasavvuru şema kavramı çerçevesinde oluşturulmaya çalışılmıştır. Nitekim din psikolojisi, kriz anında dini başa çıkma yöntemlerinden Tanrısal eylem düşüncesi teorisi ve bilişsel yönelim teorisinden güç alır. Bu doğrultuda Tanrı ile birey arasındaki bağlantı noktası olan Tanrı tasavvurunun kriz yaşantıları ile ilişkisi araştırılmıştır. Makalede son olarak; olumlu Tanrı tasavvuru şemasının bireyin yaşamsal krizleri anlamlandırmada ve kriz ile başa çıkmada temel unsur olduğu değerlendirilmiştir. Oluşturulmuş doğru Tanrı tasavvuru şeması ile birey başta krizle mücadele olmak üzere yaşamındaki pek çok olayın içinden geçebilecek kestirme bir yola sahip olduğu görülmektedir.
- Published
- 2022
29. Storage, pools, and chemical composition of soil organic matter surplus due to tillage intensity drop
- Author
-
Gergely Jakab, Malihe Masoudi, Balázs Madarász, Tibor Filep, Dóra Zacháry, Máté Karlik, Igor Dekemati, and Zoltán Szalai
- Abstract
Intensive tillage operations, especially moldboard plowing, are widely described as one of the leading causes of soil organic matter (SOM) decrease in cultivated topsoils. Experiments proved that afforestation or even dropped tillage intensity might increase the SOM content of the soil within decades. However, little is known about the forms and sequestration mechanisms of the recently produced organic matter under conservation agriculture practices. Thus, the present study aimed to test the following hypotheses on a Chernozem crop field shifted to conservation tillage: (i) SOM increase appears in the uppermost soil layer without any effect in the subsoil layer; (ii) SOM increase affects each (both labile and stabile) SOM pools of the soil; (iii) the increase modifies the SOM composition of the fractions. The investigations were carried out in a long-term field experiment established in 2002 at Józsefmajor, Hungary. The present study compares the SOM amount and composition of the 0-10 cm and 30-40 cm horizons under plowing, deep cultivation, and no-tillage. Decreasing cultivation intensity resulted in a general soil organic carbon (SOC) concentration increase in both the mineral phase associated OM (stable pool), and the aggregate occluded OM fractions (labile pool). This indicates a relevant saturation deficit in both fractions of the topsoil even though the particulate organic matter fraction did not change. The increase is probably due to the above-ground plant residue input surplus as the SOC content in the 30-40cm layer did not change. The SOM surplus stabilized in the soil did not affect SOM composition differences between depth and fractions resulted in a cultivation-independent chemical SOM composition. The only difference was aromaticity, which showed increasing stratification due to tillage intensity mitigation. These results suggest the highlighted role of dissolved organic matter movement in the profile as the possible driving force of differentiation of aromaticity with depth. The results also underline the role of local circumstances in organic matter composition changes, proving the process's complexity and the difficulties of holistic model construction. The present research was supported by the Hungarian National Research and Innovation Office (NKFIH) K-123953, which is kindly acknowledged.
- Published
- 2022
30. Detection of diagenetic alteration in bones and teeth for migration and dietary studies — a combined FTIR and C-N–O-Sr isotope study on tenth century CE cemeteries in northern and northeastern Hungary
- Author
-
Ariana Gugora, Attila Demény, Erzsébet Fóthi, Anikó Horváth, László Palcsu, and Máté Karlik
- Subjects
Archeology ,Anthropology - Abstract
Stable isotope-based dietary information on the tenth century CE Hungarian population serves as a valuable comparative tool to other dietary stable isotope studies in the region. This study presents a multiproxy approach involving skeletal samples with the least diagenetic alteration and the best-preserved primary signals. Dental and bone samples collected from three cemeteries in northeastern Hungary were investigated using a combination of Fourier-transform infrared spectroscopy (FTIR), stable isotope geochemistry, and strontium isotope analysis. FTIR measurements were used to detect the addition of secondary carbonate to the skeletal apatite carbonate component and to differentiate diagenetically altered samples. Our results suggest that all but the bone apatite carbonate stable isotope values and 87Sr/86Sr ratios are trustworthy and may be used to interpret the diet and migration of the researched individuals. We also determined that the inhabitants of the three tenth century CE Hungarian settlements relied primarily on C3 plants, but that C4 plants, most likely broomcorn millet (P. miliaceum), comprised a moderate portion of their plant-based diet and that animal products were generally consumed in moderate-high amounts. Coupled analyses of carbonate oxygen and strontium isotope compositions revealed that most of the bone apatite carbonate was heavily altered, whereas enamel apatite carbonate samples largely preserved their primary compositions. The bones showing the least amount of diagenetic alteration may partially preserve their primary apatite carbonate compositions, as well as show a combination of primary and secondary signals, which should be taken into consideration when bone apatite carbonate data are interpreted.
- Published
- 2022
31. A Hybrid Machine Learning Model to Study UV-Vis Spectra of Gold Nanospheres
- Author
-
M. F. Yilmaz, M. Ozdemir, Cafer T. Yavuz, Y. Danisman, and B. Karlik
- Subjects
Physics ,Artificial neural network ,Phonon ,Biophysics ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Linear discriminant analysis ,01 natural sciences ,Biochemistry ,010309 optics ,Quantum dot ,0103 physical sciences ,Principal component analysis ,Attractor ,Vector field ,0210 nano-technology ,Biological system ,Plasmon ,Biotechnology - Abstract
Here, we have employed principal component analysis (PCA) and linear discriminant analysis (LDA) to analyze the Mie-calculated UV-Vis spectra of gold nanospheres (GNS). Eigen spectra of PCA perform the Fano-type resonances. PCA vector spectra determine the 3D vector fields which reveal the homoclinic orbit strange attractor. Quantum confinement effects are observed by the 3D representation of LDA. Standing wave patterns resulting from oscillations of ion-acoustic phonon and electron waves are illustrated through the eigen spectra of LDA. Such capabilities of GNPs have brought high attention to the high energy density physics applications. Furthermore, accurate prediction of gold nanoparticle (GNP) sizes using machine learning could provide rapid analysis without the need for expensive analysis. Two hybrid algorithms consist of unsupervised PCA and two different supervised ANN have been used to estimate the diameters of GNPs. PCA-based artificial neural networks(ANN) were found to estimate the diameters with a high accuracy.
- Published
- 2020
32. Szilárd szennyező anyagok vizsgálata városi talajokban Budapest XI. Kerületében
- Author
-
Zsuzsanna Angyal, Zoltán Papp Richárd, and Máté Karlik
- Abstract
A talajok szennyezőanyag-tartalmát leginkább az antropogén hatások befolyásolják, a nagyvárosokban elsősorban az építkezések, közúti forgalom, a nem megfelelő csatornázás, az esetleges csatornatörésekkor talajba kerülő különböző anyagok. Ezen anyagok elhelyezkedése, mozgása a talajban folyton változik, függ a szennyezés mértéke függ a felszíntől való távolságtól, a talaj összetételétől, a hatás mértékétől, a talaj vastagságától, a talajt alkotó ásványok összetételétől és azok arányától, stb. Tanulmányunkban Budapest XI. kerületének városi talajaiban lévő nehézfémtartalmat vizsgáztuk a talajok különböző kémiai és ásványtani tulajdonságai alapján. A munkánk során bizonyítást nyert, hogy az erős antropogén hatás alatt álló városi talajokban a határértékeket többszörösen meghaladó króm tartalom is előfordulhat, amely komoly aggodalomra adhat okot. A rendelkezésre álló adatok alapján kijelenhetjük, hogy a szennyező anyagok nem természetes eredetűek, minden esetben valamilyen emberi tevékenységre vezethetők vissza. A SEM-EDX mérésekből arra következhetünk, hogy a mért nehézfémek a talajokban elemhelyettesítésként vannak jelen, vagy egyes agyagásványokba épülve, illetve azok felületén dúsulhatnak.
- Published
- 2020
33. The structural evolution of light-ion implanted 6H-SiC single crystal: Comparison of the effect of helium and hydrogen
- Author
-
J. Lin, Tomas Polcar, Xin Ou, Bingsheng Li, H.S. Sen, Nabil Daghbouj, M. Karlik, and Mauro Callisti
- Subjects
010302 applied physics ,Materials science ,Polymers and Plastics ,Hydrogen ,Annealing (metallurgy) ,Metals and Alloys ,Elastic energy ,chemistry.chemical_element ,Blisters ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Microstructure ,01 natural sciences ,Fluence ,Molecular physics ,Electronic, Optical and Magnetic Materials ,chemistry ,0103 physical sciences ,Ceramics and Composites ,medicine ,Radiation damage ,medicine.symptom ,0210 nano-technology ,Single crystal - Abstract
The microstructure evolution of hydrogen-implanted 6H-SiC at different temperatures and fluences is investigated by using various experimental techniques. In H-implanted samples with relatively low fluence at RT, dense blister cavities are observed after annealing at 1100 °C, while no visible blister cavities appear after annealing at 1100 °C in the sample implanted at RT with high fluence. The absence of blister cavities is due to the loss of elastic energy during the crystalline-to-amorphous transition. With a further increase of implantation temperature to 450 and 900 °C, amorphization did not occur and H-containing microcracks grew laterally below the surface. Thus, blisters appeared on the surface of the samples implanted at 900 °C even without annealing. The results are compared to the microstructural evolution of He-implanted 6H-SiC which was explored in our previous work. The behavior of hydrogen and helium ions in 6H-SiC lattice was rather different. For He implantation, regardless of the fluence and implantation temperature, blisters did not form. The mechanism of migration and coalescence of nanoscale bubbles that are responsible for blistering were studied via density functional theory calculations, which well-supported the presented results. We found that both mechanisms (migration and coalescence) are energetically cheaper in the case of H compared to He.
- Published
- 2020
34. Rare earth oxide tracking coupled with 3D soil surface modelling: an opportunity to study small-scale soil redistribution
- Author
-
Máté Karlik, Zoltán Szalai, Csilla Király, Adrienn Tóth, Judit Alexandra Szabó, and Gergely Jakab
- Subjects
Soil crust ,Stratigraphy ,TRACER ,Leaching (pedology) ,Front (oceanography) ,Erosion ,Run-on ,Soil science ,Crust ,Surface runoff ,Geology ,Earth-Surface Processes - Abstract
Purpose Small-scale runoff and soil redistribution processes are important factors in rainfall simulation studies. Therefore, the main objective of this study is to examine the feasibility of rare earth oxide (REO) tracking combined with 3D surface modelling and soil crust analysis by scanning electron microscopy. Materials and methods Four 40 mmh−1 rainfall simulations (divided into two blocks) were conducted on a Luvisol sample at 9% slope steepness. In a block, two successive simulations were run on a tilled, and then, on a crusted surface. Before the first rainfall simulation of a block, the tilled surface was prepared by hoeing and application of four REO tracers (Pr6O11 Sm2O3, Ho2O3 and Yb2O3) to the freshly tilled surface. REOs divided the parcel into two back, and two front sub-parcels. The REO runoff content was measured by XRF, while the redistributed REOs were measured by SEM on polished crust samples taken after the second experiment in each block. Additionally, before and after 3D models of the surface were created for determining runoff direction and redistribution pattern. Results and discussion According to the REO content of the soil loss samples, the soil washed down from the front sub-parcels, while back parcels started contributing to soil loss only during the second block experiments. The surface microtopography changed between the experiments. The runoff path from the back sub-parcels headed to one side of the parcel. This strong, cross-side runoff pattern explained the lack of the back sub-parcel REOs in the soil loss. Meanwhile, in the crust samples, several forms of the redistribution were identified. The REOs of the back sub-parcels were found in the samples that were collected in runoff paths, and the leaching pattern became traceable with REOs. Moreover, we were able to reconstruct the original surface easily on SEM images. Conclusions Small-scale redistribution and the role of the microtopography of the surface should be considered as an erosional factor in erosion studies in a more detailed way. Behaviour of the REO as a soil sediment tracer has great potential, although questions remain. REO tracing applied with runoff direction modelling and SEM analysis of soil crust samples was suitable to monitor the runoff path, and explain the soil redistribution pattern horizontally and vertically.
- Published
- 2020
35. Gastric ultrasound to assess gastric volume for 1-h NPO times
- Author
-
Thomas Austin, Joelle Karlik, Chris McLaughlin, and Laura Gilbertson
- Subjects
Anesthesiology and Pain Medicine ,Pediatrics, Perinatology and Child Health ,Stomach ,Humans ,Fasting ,Ultrasonography - Published
- 2022
36. Participative Cognitive Mapping as a Multidisciplinary Approach for Managing Complex Systems
- Author
-
Aleksandr E. Karlik, Vladimir V. Platonov, and Elena A. Iakovleva
- Published
- 2022
37. TENSOR ROBUST PRINCIPAL COMPONENT ANALYSIS OF LIGHTNING IMAGES: BUTTERFLY EFFECT OF BLACK HOLES
- Author
-
M F Yilmaz, B Karlik, and F Yilmaz
- Published
- 2022
- Full Text
- View/download PDF
38. Adaptive Theory of Socio-economic Systems Management Based on Logical-Linguistic Modeling
- Author
-
Aleksandr E. Karlik, Boris L. Kukor, and Elena A. Iakovleva
- Published
- 2022
39. Dilemmas between barley cultivars under salinity stress
- Author
-
Elif KARLIK
- Published
- 2022
40. Can Assessment of Rheological Properties of Whole Blood and Plasma Be Useful in the Diagnosis of Tinnitus? A Pilot Study
- Author
-
Anna Marcinkowska-Gapińska, Barbara Maciejewska, Anna Majewska, Weronika Kawałkiewicz, Marta Urbaniak-Olejnik, Wawrzyniec Loba, Olgierd Stieler, Dariusz Komar, Leszek Kubisz, Michał Karlik, and Dorota Hojan-Jezierska
- Subjects
Health, Toxicology and Mutagenesis ,blood viscosity ,Public Health, Environmental and Occupational Health ,plasma viscosity ,tinnitus ,hemorheology - Abstract
Tinnitus is a sensation of ringing in the ears in the absence of any physical source in the environment. Between 9–35% of adults experience some form of tinnitus. Common causes of tinnitus include noise, head injury, ototoxic substances, as well as disorders of blood and blood vessels. Vascular causes include: head—neck tumours, turbulent blood flow, problems with blood supply and inner ear cell damage. The aspect of rheology in terms of tinnitus has not been described yet. In the present study, which comprised 12 patients aged 30 to 74 years presenting with tinnitus, rheological properties of whole blood and plasma were assessed. All the subjects underwent audiological and neurological evaluation. The Quemada model was used to describe the variability of red blood cell shape, as well as their tendency to form aggregates. On the basis of the experimental study, statistically different results of haemorheological measurements were observed in the evaluated group in comparison to a reference group.
- Published
- 2023
41. Potential stress tolerance roles of barley germins and GLPs
- Author
-
Elif Karlik, İstinye Üniversitesi, Sağlık Hizmetleri Meslek Yüksekokulu, Eczane Hizmetleri Bölümü, and Karlik, Elif
- Subjects
chemistry.chemical_classification ,Zinc finger ,Oligopeptide transmembrane transporter activity ,Glycosylation ,Functional analysis ,Germin-like Proteins ,Hordeum ,Biology ,Amino acid ,chemistry.chemical_compound ,Germins ,chemistry ,Biochemistry ,Membrane protein ,Gene Expression Regulation, Plant ,Barley ,Hordeum Vulgare L ,Multigene Family ,Protein Analysis ,Genetics ,Gene ,Developmental biology ,Developmental Biology ,Glycoproteins ,Plant Proteins - Abstract
Germins and germin-like proteins (GLPs) known as germination markers are encoded by multigene families in several plant species, including barley. To date, functional analysis has revealed germins and GLPs are involved in diverse processes such as embryonic development and stress responses. The aim of this study was the analysis of barley germins and GLPs. In this study, 80 putative germins and GLPs have been identified in barley by using known 17 germins and GLP sequences. Analysis of germins and GLPs showed all germins and GLPs are distributed on all seven chromosomes that most of them spread through chromosome 3, 4 and 7 with 16, 18 and 12 proteins on each, respectively. The protein sizes varied between 185 and 335 amino acids, with an average length of 225 aa. Twelve conserved motifs were found. While germin motifs 1 and 3 were detected in all germins and GLPs, some motifs were found to be related to signalization. Interestingly, protein-protein interaction analysis demonstrated some GLPs are associated with RAB6-interacting golgin, oligopeptide transmembrane transporter activity, beta-glucuronidase activity, protein N-linked glycosylation, multi-pass membrane protein, and proteins containing zinc finger (Znf) domain and RING (really interesting new gene)-type zinc finger domains. Our findings suggest that barley germins and GLPs may have diverse functions that make them important candidates for crop improvement. WOS:000682635100001 34363524 Q4
- Published
- 2021
42. Artificial Neural Networks to Assess Virtual Reality Anterior Cervical Discectomy Performance
- Author
-
Rolando F. Del Maestro, Recai Yilmaz, Vincent Bissonnette, Nicole Ledwos, Bekir Karlik, Nykan Mirchi, and Alexander Winkler-Schwartz
- Subjects
Artificial neural network ,business.industry ,medicine.medical_treatment ,Virtual Reality ,Cognition ,Virtual reality ,Machine learning ,computer.software_genre ,Motion (physics) ,Task (project management) ,Artificial Intelligence ,Discectomy ,medicine ,Humans ,Surgery ,Clinical Competence ,Neural Networks, Computer ,Neurology (clinical) ,Artificial intelligence ,Metric (unit) ,business ,computer ,Diskectomy ,Network analysis - Abstract
Background Virtual reality surgical simulators provide a safe environment for trainees to practice specific surgical scenarios and allow for self-guided learning. Artificial intelligence technology, including artificial neural networks, offers the potential to manipulate large datasets from simulators to gain insight into the importance of specific performance metrics during simulated operative tasks. Objective To distinguish performance in a virtual reality-simulated anterior cervical discectomy scenario, uncover novel performance metrics, and gain insight into the relative importance of each metric using artificial neural networks. Methods Twenty-one participants performed a simulated anterior cervical discectomy on the novel virtual reality Sim-Ortho simulator. Participants were divided into 3 groups, including 9 post-resident, 5 senior, and 7 junior participants. This study focused on the discectomy portion of the task. Data were recorded and manipulated to calculate metrics of performance for each participant. Neural networks were trained and tested and the relative importance of each metric was calculated. Results A total of 369 metrics spanning 4 categories (safety, efficiency, motion, and cognition) were generated. An artificial neural network was trained on 16 selected metrics and tested, achieving a training accuracy of 100% and a testing accuracy of 83.3%. Network analysis identified safety metrics, including the number of contacts on spinal dura, as highly important. Conclusion Artificial neural networks classified 3 groups of participants based on expertise allowing insight into the relative importance of specific metrics of performance. This novel methodology aids in the understanding of which components of surgical performance predominantly contribute to expertise.
- Published
- 2019
43. Commentary: Artificial Neural Network Approach to Competency-Based Training Using a Virtual Reality Neurosurgical Simulation
- Author
-
Aiden Reich, Nykan Mirchi, Recai Yilmaz, Nicole Ledwos, Vincent Bissonnette, Dan Huy Tran, Alexander Winkler-Schwartz, Bekir Karlik, and Rolando F. Del Maestro
- Subjects
Artificial Intelligence ,Osteophyte ,Virtual Reality ,Humans ,Surgery ,Computer Simulation ,Neurology (clinical) ,Clinical Competence ,Neural Networks, Computer - Abstract
The methodology of assessment and training of surgical skills is evolving to deal with the emergence of competency-based training. Artificial neural networks (ANNs), a branch of artificial intelligence, can use newly generated metrics not only for assessment performance but also to quantitate individual metric importance and provide new insights into surgical expertise.To outline the educational utility of using an ANN in the assessment and quantitation of surgical expertise. A virtual reality vertebral osteophyte removal during a simulated surgical spine procedure is used as a model to outline this methodology.Twenty-one participants performed a simulated anterior cervical diskectomy and fusion on the Sim-Ortho virtual reality simulator. Participants were divided into 3 groups, including 9 postresidents, 5 senior residents, and 7 junior residents. Data were retrieved from the osteophyte removal component of the scenario, which involved using a simulated burr. The data were manipulated to initially generate 83 performance metrics spanning 3 categories (safety, efficiency, and motion) of which only the most relevant metrics were used to train and test the ANN.The ANN model was trained on 6 safety metrics to a testing accuracy of 83.3%. The contributions of these performance metrics to expertise were revealed through connection weight products and outlined 2 identifiable learning patterns of technical skills.This study outlines the potential utility of ANNs which allows a deeper understanding of the composites of surgical expertise and may contribute to the paradigm shift toward competency-based surgical training.
- Published
- 2021
44. Comparison of Single FWM Impact with Combined Impact of FWM and SRS on the Performance of Long-Haul DWDM/UDWDM Communication Systems Using SSMFs
- Author
-
Kubra Kilincarslan and Sait Eser Karlik
- Published
- 2021
45. Establishment of Direct Organogenesis Protocol for Arachis hypogaea cv. Virginia in Liquid Medium by Temporary Immersion System (TIS)
- Author
-
Elif Aylin Ozudogru, Elif Karlik, Doaa Elazab, Maurizio Lambardi, İstinye Üniversitesi, Mühendislik ve Doğa Bilimleri Fakültesi, Moleküler Biyoloji ve Genetik Bölümü, Elif Aylin Özüdoğru / 0000-0002-5871-0617, Özüdoğru, Elif Aylin, Elif Aylin Özüdoğru / AAP-8117-2020, and Elif Aylin Özüdoğru / 8677777800
- Subjects
De-Embryonated Cotyledons ,Peanut ,PlantformTM ,Temporary Immersion System ,Direct Shoot Proliferation ,Plant Science ,Horticulture ,De Novo Regeneration ,de-embryonated cotyledons ,de novo regeneration ,direct shoot proliferation ,temporary immersion system ,peanut - Abstract
Peanuts (Arachis hypogaea L.) are a rich source of herbal oil, proteins, minerals, vitamins, fibers, essential amino acids, as well as bioactive compounds, and are thus widely used for human nutrition and animal feed, and for prevention from certain diseases. However, the in vitro regeneration response of the species is generally low, and it also displays a significant variability among its varieties. Thus, the development of advanced protocols and approaches for the in vitro propagation of peanut is still of immense importance. A recently developed in vitro propagation technique, TIS; Temporary Immersion Bioreactor System, provides a new approach for the mass propagation of plants. Accordingly, the present study provides an efficient de novo regeneration protocol for Arachis hypogaea L. cv. Virginia by using a TIS. Different concentrations of cytokinins, i.e., benzyladenine (BA) or thidiazuron (TDZ), were tested with several combinations of dry and medium immersion periods of TIS, corresponding to a total of 8, 12, 16, 24, 32, 36, 48, 64, 72, and 96 min daily immersions for the induction of direct organogenesis. The study exhibited that an MS medium added to 110 µM BA or 10 µM TDZ are the most appropriate medium formulations in TIS, when applied for 16 min every 16 h. The application of optimized procedures to cv. NC7 and two valuable Turkish autochthonous varieties, 7 × 77 and Com74, is also reported. To the best of our knowledge, the present study draws attention also for being the first study in which a TIS was used for peanuts. © 2022 by the authors. WOS:000902524000001 Q1
- Published
- 2022
46. Neurotoxic Impact of Individual Anesthetic Agents on the Developing Brain
- Author
-
Dabin Ji and Joelle Karlik
- Subjects
Pediatrics, Perinatology and Child Health - Abstract
Concerns about the safety of anesthetic agents in children arose after animal studies revealed disruptions in neurodevelopment after exposure to commonly used anesthetic drugs. These animal studies revealed that volatile inhalational agents, propofol, ketamine, and thiopental may have detrimental effects on neurodevelopment and cognitive function, but dexmedetomidine and xenon have been shown to have neuroprotective properties. The neurocognitive effects of benzodiazepines have not been extensively studied, so their effects on neurodevelopment are undetermined. However, experimental animal models may not truly represent the pathophysiological processes in children. Multiple landmark studies, including the MASK, PANDA, and GAS studies have provided reassurance that brief exposure to anesthesia is not associated with adverse neurocognitive outcomes in infants and children, regardless of the type of anesthetic agent used.
- Published
- 2022
47. Role of long noncoding RNAs during stress in cereal crops
- Author
-
Elif Karlik, İstinye Üniversitesi, Sağlık Hizmetleri Meslek Yüksekokulu, Eczane Hizmetleri Bölümü, and Karlik, Elif
- Subjects
Regulation of gene expression ,Genetics ,Abiotic stress ,Cellular differentiation ,fungi ,food and beverages ,Abiotic Stress ,Cell cycle ,Biology ,Chromatin remodelling ,Long non-coding RNA ,Long Noncoding RNAs ,Genomic imprinting ,Biotic Stress ,Cereal Crops - Abstract
For the last four decades, the journey of long noncoding RNA (lncRNA) biology has been still proceeding with great interest. lncRNAs can exert their functions in diverse biological processes, including development, genomic imprinting, cell differentiation, chromatin remodelling, transcriptional activation, transcriptional interference, regulation of protein re-localization, and cell cycle and can play important roles at transcriptional and posttranscriptional gene regulation. Moreover, emerging evidences indicated that lncRNAs play significant roles in response to biotic and abiotic stress in plants. In this chapter, we discuss the role of lncRNAs in biotic and abiotic stress mechanisms of cereal crops, including wheat, maize, rice, and barley.
- Published
- 2021
48. Guyana: Liza Phase 2 Novel Execution to Accelerate Field Development
- Author
-
Lawson Burns, Jeff Karlik, Guy Ashley, Rea Cauthen, Theresa Allen, John Ding, Robert C. Szafranski, and Mita Das
- Subjects
Engineering ,business.industry ,Phase (waves) ,Field development ,Parallel computing ,business - Abstract
The Liza Phase 2 Project combines a novel execution approach and forward-looking technology components to develop more complex areas of the Liza resource. The project delivers technology to optimize resource development through efficient Subsea, Umbilicals, Risers, and Flowlines (SURF) equipment designs and digital elements to enable future capabilities, such as a fiber optic cable to shore. For a new approach to Floating, Production, Storage and Offloading (FPSO) delivery, the project is partnering with SBM for the first ever use of their Fast4Ward® concept.The SBM Fast4Ward® program utilizes the Multi-Purpose Floater (MPF) hull design and provides the benefits of a new build FPSO with a reduced project development time similar to that of conversions. With almost double the SURF infrastructure as Liza Phase 1, Liza Phase 2 uses learnings and standardized SURF architecture to deliver one of the industry's largest subsea developments. Establishment of win-win partnerships with the primary contractors to achieve best overall value and strategic use of part number duplication contribute to the overall success.Based on the work of ExxonMobil proprietary reservoir modelling, infrastructure is being installed to enable Water Alternating Gas (WAG) injection for the complex development while a subsea fiber optic cable enables data to shore for optimized reservoir management and advanced facilities surveillance.The project is on track to deliver ~2 years after first oil was achieved for Liza Phase 1 by building on design replication and common methodologies where possible. Through thoughtful application of standardization, learnings, and incorporation of new technologies, the project efficiently delivers advanced capabilities to the Liza field. This also enables a "Design One, Build Multiple" (D1BM) approach for future developments in Guyana.
- Published
- 2021
49. The Development of an Enhanced Recovery Protocol for Kasai Portoenterostomy
- Author
-
Peggy Vogt, Renee Tolly, Matt Clifton, Tom Austin, and Joelle Karlik
- Subjects
Pediatrics, Perinatology and Child Health - Abstract
Balancing post-operative adequate pain control, respiratory depression, and return of bowel function can be particularly challenging in infants receiving the Kasai procedure (hepatoportoenterostomy). We performed a retrospective chart review of all patients who underwent the Kasai procedure from a single surgeon at Children’s Healthcare of Atlanta from 1 January 2018, to 1 September 2022. 12 patients received the Kasai procedure within the study period. Average weight was 4.47 kg and average age was 7.4 weeks. Most patients received multimodal pain management including dexmedetomidine and/or ketorolac along with intravenous opioids. A balance of colloid and crystalloids were used for all patients; 57% received blood products as well. All patients were extubated in the OR and transferred to the general surgical floor without complications. Return of bowel function occurred in all patients by POD2, and enteral feeds were started by POD3. One patient had a presumed opioid overdose while admitted requiring a rapid response and brief oxygen supplementation. Simultaneously optimizing pain control, respiratory safety, and bowel function is possible in infants receiving the Kasai procedure. Based on our experience and the current pediatric literature, we propose an enhanced recovery protocol to improve patient outcomes in this fragile population. Larger, prospective studies implementing an enhanced recovery protocol in the Kasai population are required for stronger evidence and recommendations.
- Published
- 2022
50. Does Deoxynivalenol Affect Amoxicillin and Doxycycline Absorption in the Gastrointestinal Tract? Ex Vivo Study on Swine Jejunum Mucosa Explants
- Author
-
Marta Mendel, Wojciech Karlik, Urszula Latek, Magdalena Chłopecka, Ewelina Nowacka-Kozak, Katarzyna Pietruszka, and Piotr Jedziniak
- Subjects
Jejunum ,Swine ,Doxycycline ,Health, Toxicology and Mutagenesis ,Animals ,Amoxicillin ,Intestinal Mucosa ,Toxicology ,deoxynivalenol ,amoxicillin ,doxycycline ,Ussing chamber ,swine jejunum mucosa explants ,Anti-Bacterial Agents - Abstract
The presence of deoxynivalenol (DON) in feed may increase intestinal barrier permeability. Disturbance of the intestinal barrier integrity may affect the absorption of antibiotics used in animals. Since the bioavailability of orally administered antibiotics significantly affects their efficacy and safety, it was decided to evaluate how DON influences the absorption of the most commonly used antibiotics in pigs, i.e., amoxicillin (AMX) and doxycycline (DOX). The studies were conducted using jejunal explants from adult pigs. Explants were incubated in Ussing chambers, in which a buffer containing DON (30 µg/mL), AMX (50 µg/mL), DOX (30 µg/mL), a combination of AMX + DON, or a combination of DOX + DON was used. Changes in transepithelial electrical resistance (TEER), the flux of transcellular and intracellular transport markers, and the flux of antibiotics across explants were measured. DON increased the permeability of small intestine explants, expressed by a reduction in TEER and an intensification of transcellular marker transport. DON did not affect AMX transport, but it accelerated DOX transport by approximately five times. The results suggest that DON inhibits the efflux transport of DOX to the intestinal lumen, and thus significantly changes its absorption from the gastrointestinal tract.
- Published
- 2022
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.