329 results on '"Giovanni Rezza"'
Search Results
2. Durability of neutralizing antibodies against yellow fever virus after vaccination in healthy adults
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Riccardo De Santis, Giovanni Faggioni, Alessandra Amoroso, Andrea Ciammaruconi, Alice Pomponi, Maria Stella Lia, Donatella Amatore, Filippo Molinari, Giancarlo Petralito, Paola Stefanelli, Giovanni Rezza, and Florigio Lista
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Infectious Diseases ,General Veterinary ,General Immunology and Microbiology ,Public Health, Environmental and Occupational Health ,Molecular Medicine - Published
- 2023
3. Early Estimates of Monkeypox Incubation Period, Generation Time, and Reproduction Number, Italy, May–June 2022
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Giorgio, Guzzetta, Alessia, Mammone, Federica, Ferraro, Anna, Caraglia, Alessia, Rapiti, Valentina, Marziano, Piero, Poletti, Danilo, Cereda, Francesco, Vairo, Giovanna, Mattei, Francesco, Maraglino, Giovanni, Rezza, and Stefano, Merler
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Male ,Microbiology (medical) ,Sexual and Gender Minorities ,Infectious Diseases ,Italy ,Epidemiology ,Reproduction ,Humans ,Monkeypox ,Homosexuality, Male ,Monkeypox virus ,Infectious Disease Incubation Period - Abstract
We analyzed the first 255 PCR-confirmed cases of monkeypox in Italy in 2022. Preliminary estimates indicate mean incubation period of 9.1 (95% CI 6.5-10.9) days, mean generation time of 12.5 (95% CI 7.5-17.3) days, and reproduction number among men who have sex with men of 2.43 (95% CI 1.82-3.26).
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- 2022
4. Omicron variant evolution on vaccines and monoclonal antibodies
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Michela Sabbatucci, Antonio Vitiello, Salvatore Clemente, Andrea Zovi, Mariarosaria Boccellino, Francesco Ferrara, Carla Cimmino, Roberto Langella, Annarita Ponzo, Paola Stefanelli, and Giovanni Rezza
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Pharmacology ,Immunology ,Pharmacology (medical) - Published
- 2023
5. TBE in Italy
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Valentina Tagliapietra, Flavia Riccardo, Martina Del Manso, and Giovanni Rezza
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Earth-Surface Processes - Abstract
Italy is considered a low-incidence country for tick-borne encephalitis (TBE) in Europe. Areas at higher risk for TBE in Italy are geographically clustered in the forested and mountainous regions and provinces in the north east part of the country, as suggested by TBE case series published over the last decade. A national enhanced surveillance system for TBE has been established since 2017. Before this, information on the occurrence of TBE cases at the national level in Italy was lacking. Both incidence rates and the geographical distribution of the disease were mostly inferred from endemic areas where surveillance was already in place, ad hoc studies and international literature.
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- 2023
6. Evaluating the effect of targeted strategies as control tools for hypervirulent meningococcal C outbreaks: a case study from Tuscany, Italy, 2015 to 2016
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Giorgio Guzzetta, Marco Ajelli, Alessandro Miglietta, Cecilia Fazio, Arianna Neri, Stefano Merler, Giovanni Rezza, and Paola Stefanelli
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Epidemiology ,Virology ,Public Health, Environmental and Occupational Health - Abstract
Background Meningococcus (Neisseria meningitidis) is the causative bacteria of invasive meningococcal disease (IMD), a major cause of meningitis and sepsis. In 2015–16, an outbreak caused by serogroup C meningococci (MenC), belonging to the hyperinvasive strain ST-11(cc-11), resulted in 62 IMD cases in the region of Tuscany, Italy. Aim We aimed to estimate the key outbreak parameters and assess the impact of interventions used in the outbreak response. Methods We developed a susceptible-carrier-susceptible individual-based model of MenC transmission, accounting for transmission in households, schools, discos/clubs and the general community, which was informed by detailed data on the 2015–16 outbreak (derived from epidemiological investigations) and on the implemented control measures. Results The outbreak reproduction number (Re) was 1.35 (95% prediction interval: 1.13–1.47) and the IMD probability was 4.6 for every 1,000 new MenC carriage episodes (95% confidence interval: 1.8–12.2). The interventions, i.e. chemoprophylaxis and vaccination of close contacts of IMD cases as well as age-targeted vaccination, were effective in reducing Re and ending the outbreak. Case-based interventions (including ring vaccination) alone would have been insufficient to achieve outbreak control. The definition of age groups to prioritise vaccination had a critical impact on the effectiveness and efficiency of control measures. Conclusions Our findings suggest that there are no effective alternatives to widespread reactive vaccination during outbreaks of highly transmissible MenC strains. Age-targeted campaigns can increase the effectiveness of vaccination campaigns. These results can be instrumental to define effective guidelines for the control of future meningococcal outbreaks caused by hypervirulent strains.
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- 2023
7. Health emergency communication: which key elements?
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Chiara Crepaldi, Alessandro Venturi, Guido Legnante, Ferruccio Di Paolo, Giovanni Rezza, and Luisa Brgonzoli
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Health (social science) ,Epidemiology ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Health Informatics - Published
- 2023
8. Early evidence on vaccine effectiveness of COVID vaccines in PLWHA
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Monica Sane Schepisi, Angela Meggiolaro, Andrea Siddu, Alessia Mammone, Sara Farina, Carolina Castagna, Anna Caraglia, Francesco Maraglino, Stefania Boccia, and Giovanni Rezza
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Health (social science) ,Epidemiology ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Health Informatics - Published
- 2023
9. Health needs of migrants hosted on quarantine vessels in italy during COVID-19 pandemic
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Emanuela Frisicale, Salvatore Zichichi, Francesca Basile, Ignazio Schintu, Giorgia Battaglia, Claudia Marotta, Ulrico Angeloni, Roberto Falvo, Laura Pecoraro, Domenico Stabile, Claudio Pulvirenti, Fabrizio Stracci, and Giovanni Rezza
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Health (social science) ,Epidemiology ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Health Informatics - Published
- 2023
10. Delivery of international vaccinations at the territorial units (uts) of the air and maritime border health offices and seafarers’ health services (usmaf-sasn) of the ministry of health in the period 2017-2022
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Eleonora Tassone, Emanuela Frisicale, Roberto Falvo, Cosimo Trionfo, Camilla Romano, Marina Di Vona, Ulrico Angeloni, Giovanni Rezza, Romina Sezzatini, and Anna Odone
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Health (social science) ,Epidemiology ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Health Informatics - Published
- 2023
11. Covid-19 pandemic and management of migrants on quarantine vessels in italy
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Salvatore Zichichi, Emanuela Frisicale, Francesca Basile, Ignazio Schintu, Laura Pecoraro, Claudia Marotta, Domenico Stabile, Claudio Pulvirenti, Roberto Falvo, Ulrico Angeloni, Giorgia Battaglia, Giovanni Rezza, and Fabrizio Stracci
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Health (social science) ,Epidemiology ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Health Informatics - Published
- 2023
12. Effectiveness of vaccination against SARS-CoV-2 infection in the pre-delta era: a systematic review and meta-analysis
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Angela Meggiolaro, Monica sane schepisi, and Giovanni Rezza
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Health (social science) ,Epidemiology ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Health Informatics - Published
- 2023
13. Quarantine Vessels and Irregular Migration: New Public Health Measures against SARS-CoV-2
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Laura Pecoraro, Salvatore Zichichi, Emanuela Maria Frisicale, Claudia Marotta, Domenico Stabile, Claudio Pulvirenti, Ulrico Angeloni, Giorgia Battaglia, Giovanni Rezza, and Fabrizio Stracci
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- 2023
14. Occupational Diseases and Injuries on Board Ships: A Preliminary Analysis for an Epidemiological Observatory of Seafarers
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Getu Gamo Sagaro, Ulrico Angeloni, Marzio Di Canio, Claudia Marotta, Giovanni Rezza, Andrea Silenzi, and Francesco Amenta
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- 2022
15. Relative effectiveness of a 2nd booster dose of COVID-19 mRNA vaccine up to four months post administration in individuals aged 80 years or more in Italy: A retrospective matched cohort study
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Massimo Fabiani, Alberto Mateo-Urdiales, Chiara Sacco, Maria Cristina Rota, Daniele Petrone, Marco Bressi, Martina Del Manso, Andrea Siddu, Valeria Proietti, Serena Battilomo, Francesca Menniti-Ippolito, Patrizia Popoli, Antonino Bella, Flavia Riccardo, Anna Teresa Palamara, Giovanni Rezza, Silvio Brusaferro, and Patrizio Pezzotti
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Cohort Studies ,Infectious Diseases ,COVID-19 Vaccines ,General Veterinary ,General Immunology and Microbiology ,Italy ,SARS-CoV-2 ,Public Health, Environmental and Occupational Health ,Molecular Medicine ,Humans ,COVID-19 ,Aged ,Retrospective Studies - Abstract
Several countries started a 2nd booster COVID-19 vaccination campaign targeting the elderly population, but evidence around its effectiveness is still scarce. This study aims to estimate the relative effectiveness of a 2nd booster dose of COVID-19 mRNA vaccine in the population aged ≥ 80 years in Italy, during predominant circulation of the Omicron BA.2 and BA.5 subvariants. We linked routine data from the national vaccination registry and the COVID-19 surveillance system. On each day between 11 April and 6 August 2022, we matched 1:1, according to several demographic and clinical characteristics, individuals who received the 2nd booster vaccine dose with individuals who received the 1st booster vaccine dose at least 120 days earlier. We used the Kaplan-Meier method to compare the risks of SARS-CoV-2 infection and severe COVID-19 (hospitalisation or death) between the two groups, calculating the relative vaccine effectiveness (RVE) as (1 - risk ratio)X100. Based on the analysis of 831,555 matched pairs, we found that a 2nd booster dose of mRNA vaccine, 14-118 days post administration, was moderately effective in preventing SARS-CoV-2 infection compared to a 1st booster dose administered at least 120 days earlier [14.3 %, 95 % confidence interval (CI): 2.2-20.2]. RVE decreased from 28.5 % (95 % CI: 24.7-32.1) in the time-interval 14-28 days to 7.6 % (95 % CI: -14.1 to 18.3) in the time-interval 56-118 days. However, RVE against severe COVID-19 was higher (34.0 %, 95 % CI: 23.4-42.7), decreasing from 43.2 % (95 % CI: 30.6-54.9) to 27.2 % (95 % CI: 8.3-42.9) over the same time span. Although RVE against SARS-CoV-2 infection was much reduced 2-4 months after a 2nd booster dose, RVE against severe COVID-19 was about 30 %, even during prevalent circulation of the Omicron BA.5 subvariant. The cost-benefit of a 3rd booster dose for the elderly people who received the 2nd booster dose at least four months earlier should be carefully evaluated.
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- 2022
16. Pan-yellow fever virus detection and lineage assignment by real-time RT-PCR and amplicon sequencing
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Giovanni Faggioni, Riccardo De Santis, Filippo Moramarco, Mario Di Donato, Angelo De Domenico, Filippo Molinari, Giancarlo Petralito, Claudia Fortuna, Giulietta Venturi, Giovanni Rezza, and Florigio Lista
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Virology - Published
- 2023
17. The decline of COVID-19 severity and lethality over two years of pandemic
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Valentina Marziano, Giorgio Guzzetta, Francesco Menegale, Chiara Sacco, Daniele Petrone, Alberto Urdiales, Martina del Manso del Manso, Antionino Bella, Massimo Fabiani, Maria Vescio, Flavia Riccardo, Piero Poletti, Mattia Manica, Agnese Zardini, Valeria d'Andrea, Filippo Trentini, Paola Stefanelli, Giovanni Rezza, Anna Teresa Palamara, Silvio Brusaferro, Marco Ajelli, Patrizio Pezzotti, and Stefano Merler
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Undernotification of SARS-CoV-2 infections has been a major obstacle to the tracking of critical quantities such as infection attack rates and the probability of severe and lethal outcomes. We use a model of SARS-CoV-2 transmission and vaccination informed by epidemiological and genomic surveillance data to estimate the number of daily infections occurred in Italy in the first two years of pandemic. We estimate that the attack rate of ancestral lineages, Alpha, and Delta were in a similar range (10–17%, range of 95% CI: 7–23%), while that of Omicron until February 20, 2022, was remarkably higher (51%, 95%CI: 33–70%). The combined effect of vaccination, immunity from natural infection, change in variant features, and improved patient management massively reduced the probabilities of hospitalization, admission to intensive care, and death given infection, with 20 to 40-fold reductions during the period of dominance of Omicron compared to the initial acute phase.
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- 2022
18. Effectiveness of vaccination against SARS-CoV-2 Omicron variant infection, symptomatic disease, and hospitalisation: a systematic review and meta-analysis
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Angela Meggiolaro, M. Sane Schepisi, Sara Farina, Carolina Castagna, Alessia Mammone, Andrea Siddu, Paola Stefanelli, Stefania Boccia, and Giovanni Rezza
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Pharmacology ,Booster dose ,Sars-Cov2 vaccine ,History ,omicron VOC Sars-Cov2 vaccine ,Polymers and Plastics ,SARS-CoV-2 ,Vaccination ,Immunology ,COVID-19 ,effectiveness ,waning immunity ,Industrial and Manufacturing Engineering ,Hospitalization ,Drug Discovery ,Humans ,RNA, Viral ,Molecular Medicine ,symptomatic omicron infection ,Business and International Management ,risk of hospitalization ,Settore MED/42 - IGIENE GENERALE E APPLICATA - Abstract
BackgroundThe rapid rise of Sars-Cov2 B.1.1.529 variant (named Omicron) in the late November 2021 prompted the health authorities to estimate the potential impact on the existing countermeasures, including vaccines. This meta-analysis aims to assess the effectiveness of the current Sars-Cov2 vaccine regimens against laboratory-confirmed Omicron infection. A secondary endpoint aims to investigate the waning effectiveness of primary vaccination against symptomatic Omicron infection and related hospitalization.MethodsThe systematic review started on December 1, 2021 and was concluded on March 1, 2022. Random-effects (RE) frequentist meta-analyses are performed to estimate the primary vaccination course and the booster dose effectiveness against Omicron. Multiple meta-regressions are performed under mixed-effects model. This study is registered with PROSPERO, CRD42021240143.FindingsIn total, 15 out of 502 records are included in the quantitative synthesis. The meta-analysis on B.1.1.529 infection risk produces an OR=0·69 (95%CI: 0·57 to 0·83; τ2=0·225; I2=99·49%) after primary vaccination and an OR=0·30 (95%CI: 0·23 to 0·39; τ2=0·469; I2=99·33%) after one additional booster dose. According to the multiple meta-regression models, one booster dose significantly decreases by 69% the risk of symptomatic Omicron infection (OR=0·31; 95%CI: 0·23 to 0·40) and by 88% the risk of hospitalization (OR=0·12; 95%CI: 0·08 to 0·19) with respect to unvaccinated. Six months after primary vaccination, the average risk reduction declines to 22% (OR=0·78; 95%CI: 0·69 to 0·88) against symptomatic infection and to 55% against hospitalization (OR=0·45; 95%CI: 0·30 to 0·68).InterpretationDespite the high heterogeneity, this study confirms that primary vaccination does not provide sufficient protection against symptomatic Omicron infection. Although the effectiveness of the primary vaccination against hospitalization due to Omicron remains significantly above 50% after 3 months, it dramatically fades after 6 months. Therefore, the administration of one additional booster dose is recommended within 6 months and provides a 76% decrease in the odds of symptomatic Omicron after five months.FundingThere was no funding source for this study.ARTICLE HIGHLIGHTSthe primary vaccination decreases the risk of Omicron infection by 31%, while one additional booster dose decreases the risk by 70%the primary vaccination course reduces the risk of symptomatic Omicron infection by 24% and the risk of hospitalization by 50%one additional booster dose decreases by 69% the risk of symptomatic Omicron infection and the risk of hospitalization by 88%the effectiveness of the primary vaccination against hospitalization dramatically wanes after 3 months from vaccination, reaching a minimum of 45% in risk reduction after more than 6 monthsPANEL: research in contextEvidence before this studyOmicron variant’s higher transmissibility combined with an increased risk of infection among individuals vaccinated with primary vaccination have prompted health authorities to introduce a booster vaccination. The systematic review including “vaccine effectiveness”, “Covid-19”, “SARS-CoV-2”, and “Omicron” search terms, is performed over three web engines and one early stage research platform (i.e., WHO COVID-19 DATABASE, PubMed, medRxiv + bioRxiv) Additionally, all relevant web sources reporting living data on vaccine effectiveness (i.e., https://view-hub.org/covid-19/ and https://covid-nma.com/), electronic databases and grey literature are considered. The last search update was on March 1, 2022. No country, language, study design restrictions are applied.Added value of this studyPrimary vaccination provides relatively low protection against the Omicron VOC, while one additional booster dose decreased substantially the risk of symptomatic Omicron infection and of hospitalization.Implications of all the available evidenceThe booster dose should be recommended after three months and no later than six months after the primary course vaccination, in order to avoid severe consequences, in particular among the elderly population.
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- 2022
19. Reactive vaccination as control strategy for an outbreak of invasive meningococcal disease caused by
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Cecilia, Fazio, Laura, Daprai, Arianna, Neri, Marcello, Tirani, Paola, Vacca, Milena, Arghittu, Luigina, Ambrosio, Danilo, Cereda, Maria, Gramegna, Annapina, Palmieri, Anna, Carannante, Maria Rosa, Bertoli, Lucia, Crottogini, Giorgio, Gennati, Eugenia, Quinz, Livia, Trezzi, Andrea, Ciammaruconi, Silvia, Fillo, Antonella, Fortunato, Giovanni, Rezza, Florigio, Lista, and Paola, Stefanelli
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Meningococcal Infections ,Italy ,Vaccination ,Humans ,Meningococcal Vaccines ,Neisseria meningitidis ,Serogroup ,Phylogeny ,Disease Outbreaks - Abstract
In Italy, serogroup C meningococci of the clonal complex cc11 (MenC/cc11) have caused several outbreaks of invasive meningococcal disease (IMD) during the past 20 years. Between December 2019 and January 2020, an outbreak of six cases of IMD infected with MenC/cc11 was identified in a limited area in the northern part of Italy. All cases presented a severe clinical picture, and two of them were fatal. This report is focused on the microbiological and molecular analysis of meningococcal isolates with the aim to reconstruct the chain of transmission. It further presents the vaccination strategy adopted to control the outbreak. The phylogenetic evaluation demonstrated the close genetic proximity between the strain involved in this outbreak and a strain responsible for a larger epidemic that had occurred in 2015 and 2016 in the Tuscany Region. The rapid identification and characterisation of IMD cases and an extensive vaccination campaign contributed to the successful control of this outbreak caused by a hyperinvasive meningococcal strain.
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- 2022
20. Reactive vaccination as control strategy for an outbreak of invasive meningococcal disease caused by Neisseria meningitidis C:P1.5-1,10-8:F3-6:ST-11(cc11), Bergamo province, Italy, December 2019 to January 2020
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Cecilia Fazio, Laura Daprai, Arianna Neri, Marcello Tirani, Paola Vacca, Milena Arghittu, Luigina Ambrosio, Danilo Cereda, Maria Gramegna, Annapina Palmieri, Anna Carannante, Maria Rosa Bertoli, Lucia Crottogini, Giorgio Gennati, Eugenia Quinz, Livia Trezzi, Andrea Ciammaruconi, Silvia Fillo, Antonella Fortunato, Giovanni Rezza, Florigio Lista, and Paola Stefanelli
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Epidemiology ,Virology ,Public Health, Environmental and Occupational Health - Abstract
In Italy, serogroup C meningococci of the clonal complex cc11 (MenC/cc11) have caused several outbreaks of invasive meningococcal disease (IMD) during the past 20 years. Between December 2019 and January 2020, an outbreak of six cases of IMD infected with MenC/cc11 was identified in a limited area in the northern part of Italy. All cases presented a severe clinical picture, and two of them were fatal. This report is focused on the microbiological and molecular analysis of meningococcal isolates with the aim to reconstruct the chain of transmission. It further presents the vaccination strategy adopted to control the outbreak. The phylogenetic evaluation demonstrated the close genetic proximity between the strain involved in this outbreak and a strain responsible for a larger epidemic that had occurred in 2015 and 2016 in the Tuscany Region. The rapid identification and characterisation of IMD cases and an extensive vaccination campaign contributed to the successful control of this outbreak caused by a hyperinvasive meningococcal strain.
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- 2022
21. HPV Vaccination during the COVID-19 Pandemic in Italy: Opportunity Loss or Incremental Cost
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Francesco Saverio Mennini, Andrea Silenzi, Andrea Marcellusi, Michele Conversano, Andrea Siddu, and Giovanni Rezza
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Pharmacology ,HPV ,HTA ,incremental cost ,RWD ,COVID-19 ,vaccination strategies ,Infectious Diseases ,Drug Discovery ,Immunology ,Pharmacology (medical) ,Settore SECS-P/07 - Abstract
Objectives: Italy was the first European country to introduce universal vaccination of adolescents, for both males and females, against Human Papilloma Virus (HPV) starting in 2017 with the NIP 2017–2019′s release. However, vaccine coverage rates (VCRs) among adolescents have shown a precarious take-off since the NIP’s release, and this situation worsened due to the impact of the COVID-19 pandemic in 2020. The aim of this work is to estimate the epidemiological and economic impact of drops in VCRs due to the pandemic on those generations that missed the vaccination appointment and to discuss alternative scenarios in light of the national data. Methods: Through an analysis of the official ministerial HPV vaccination reports, a model was developed to estimate the number of 12-year-old males and females who were not vaccinated against HPV during the period 2017–2021. Based on previously published models that estimate the incidence and the economic impact of HPV-related diseases in Italy, a new model was developed to estimate the impact of the aggregated HPV VCRs achieved in Italy between 2017 and 2021. Results: Overall, in 2021, 723,375 girls and 1,011,906 boys born between 2005 and 2009 were not vaccinated against HPV in Italy (42% and 52% of these cohorts, respectively). As compared with the 95% target provided by the Italian NIP, between 505,000 and 634,000 girls will not be protected against a large number of HPV-related diseases. For boys, the number of the unvaccinated population compared to the applicable target is over 615,000 in the ‘best case scenario’ and over 749,000 in the ‘worst case scenario’. Overall, between 1.1 and 1.3 million young adolescents born between 2005 and 2009 will not be protected against HPV-related diseases over their lifetime with expected lifetime costs of non-vaccination that will be over EUR 905 million. If the 95% optimal VCRs were achieved, the model estimates a cost reduction equal to EUR 529 million, the net of the costs incurred to implement the vaccination program. Conclusion: Suboptimal vaccination coverage represents a missed opportunity, not only because of the increased burden of HPV-related diseases, but also in terms of economic loss. Thus, reaching national HPV immunization goals is a public health priority.
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- 2022
22. Letter to the editor: multiple introductions of MPX in Italy from different geographic areas
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Federica Ferraro, Anna Caraglia, Alessia Rapiti, Danilo Cereda, Francesco Vairo, Giovanna Mattei, Francesco Maraglino, and Giovanni Rezza
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Epidemiology ,Virology ,Public Health, Environmental and Occupational Health - Published
- 2022
23. TBE in Italy
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Valentina Tagliapietra, Flavia Riccardo, Martina Del Manso, and Giovanni Rezza
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Italy is considered a low-incidence country for tick-borne encephalitis (TBE) in Europe. Areas at higher risk for TBE in Italy are geographically clustered in the forested and mountainous regions and provinces in the northeast part of the country, as suggested by TBE case series published over the last decade. A national enhanced surveillance system for TBE has been established since 2017. Before this, information on the occurrence of TBE cases at the national level in Italy was lacking. Both incidence rates and the geographical distribution of the disease were mostly inferred from endemic areas where surveillance was already in place, ad hoc studies and international literature.
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- 2022
24. The Magnitude of Cardiovascular Disease Risk Factors in Seafarers from 1994 to 2021: A Systematic Review and Meta-Analysis
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Getu Gamo Sagaro, Ulrico Angeloni, Claudia Marotta, Giulio Nittari, Giovanni Rezza, Andrea Silenzi, Gopi Battineni, and Francesco Amenta
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Medicine (miscellaneous) - Abstract
Objectives: The incidence of acute cardiac events is one of the main reasons for medical consultation, disembarkation, repatriation, and death among seafarers at sea. Managing cardiovascular risk factors, particularly those that can be modified, is the key to preventing cardiovascular disease. Therefore, this review estimates the pooled prevalence of major CVD risk factors among seafarers. Methods: We conducted a comprehensive search of studies published between 1994 and December 2021 in four international databases, namely PubMed/Medline, Scopus, Google Scholar, and Web of Science (WOS). Each study was evaluated for methodological quality using the Joanna Briggs Institute (JBI) critical appraisal tool for prevalence studies. The DerSimonian–Laird random-effects model with logit transformations was used to estimate the pooled prevalence of major CVD risk factors. The results were reported in accordance with the Preferred Items for Systematic Review and Meta-analysis (PRISMA) guidelines. Results: Out of all 1484 studies reviewed, 21 studies with 145,913 study participants met the eligibility criteria and were included in the meta-analysis. In the pooled analysis, the prevalence of smoking was found to be 40.14% (95% CI: 34.29 to 46.29%) with heterogeneity between studies (I2 = 98%, p < 0.01). The prevalence of hypertension, overweight, obesity, diabetes mellitus, and alcohol consumption was 45.32%, 41.67%, 18.60%, 12.70%, and 38.58%, respectively. However, the sensitivity analysis after excluding studies showed a pooled prevalence of hypertension, overweight, obesity, and diabetes mellitus of 44.86%, 41.87%, 15.99%, and 16.84%, respectively. The subgroup analysis demonstrated that smoking prevalence among seafarers had decreased significantly after 2013. Conclusion: This study demonstrated that CVD risk factors, particularly hypertension, overweight, smoking, alcohol consumption, and obesity, are prevalent among seafarers. These findings may serve as a guide for shipping companies and other responsible bodies in order to prevent CVD risk factors among seafarers. PROSPERO Registration: CRD42022300993.
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- 2023
25. Effectiveness of BNT162b2 vaccine against SARS-CoV-2 infection and severe COVID-19 in children aged 5-11 years in Italy: a retrospective analysis of January-April, 2022
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Chiara Sacco, Martina Del Manso, Alberto Mateo-Urdiales, Maria Cristina Rota, Daniele Petrone, Flavia Riccardo, Antonino Bella, Andrea Siddu, Serena Battilomo, Valeria Proietti, Patrizia Popoli, Francesca Menniti Ippolito, Anna Teresa Palamara, Silvio Brusaferro, Giovanni Rezza, Patrizio Pezzotti, and Massimo Fabiani
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COVID-19 Vaccines ,SARS-CoV-2 ,COVID-19 ,Humans ,Viral Vaccines ,General Medicine ,Child ,BNT162 Vaccine ,Retrospective Studies - Abstract
By April 13, 2022, more than 4 months after the approval of BNT162b2 (Pfizer-BioNTech) for children, less than 40% of 5-11-year-olds in Italy had been vaccinated against COVID-19. Estimating how effective vaccination is in 5-11-year-olds in the current epidemiological context dominated by the omicron variant (B.1.1.529) is important to inform public health bodies in defining vaccination policies and strategies.In this retrospective population analysis, we assessed vaccine effectiveness against SARS-CoV-2 infection and severe COVID-19, defined as an infection leading to hospitalisation or death, by linking the national COVID-19 surveillance system and the national vaccination registry. All Italian children aged 5-11 years without a previous diagnosis of infection were eligible for inclusion and were followed up from Jan 17 to April 13, 2022. All children with inconsistent vaccination data, diagnosed with SARS-CoV-2 infection before the start date of the study or without information on the municipality of residence were excluded from the analysis. With unvaccinated children as the reference group, we estimated vaccine effectiveness in those who were partly vaccinated (one dose) and those who were fully vaccinated (two doses).By April 13, 2022, 1 063 035 (35·8%) of the 2 965 918 children aged 5-11 years included in the study had received two doses of the vaccine, 134 386 (4·5%) children had received one dose only, and 1 768 497 (59·6%) were unvaccinated. During the study period, 766 756 cases of SARS-CoV-2 infection and 644 cases of severe COVID-19 (627 hospitalisations, 15 admissions to intensive care units, and two deaths) were notified. Overall, vaccine effectiveness in the fully vaccinated group was 29·4% (95% CI 28·5-30·2) against SARS-CoV-2 infection and 41·1% (22·2-55·4) against severe COVID-19, whereas vaccine effectiveness in the partly vaccinated group was 27·4% (26·4-28·4) against SARS-CoV-2 infection and 38·1% (20·9-51·5) against severe COVID-19. Vaccine effectiveness against infection peaked at 38·7% (37·7-39·7) at 0-14 days after full vaccination and decreased to 21·2% (19·7-22·7) at 43-84 days after full vaccination.Vaccination against COVID-19 in children aged 5-11 years in Italy showed a lower effectiveness in preventing SARS-CoV-2 infection and severe COVID-19 than in individuals aged 12 years and older. Effectiveness against infection appears to decrease after completion of the current primary vaccination cycle.None.For the Italian translation of the summary see Supplementary Materials section.
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- 2022
26. Dengue and Chikungunya virus circulation in Cameroon and Gabon: molecular evidence among symptomatic individuals
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Ghyslaine Bruna Djeunang Dongho, Giulietta Venturi, Claudia Fortuna, Giacomo Maria Paganotti, Carlo Severini, Mariangela L’Episcopia, Armand Tiotsia Tsapi, Eleonora Benedetti, Giulia Marsili, Antonello Amendola, Giovanni Rezza, Martin Sanou Sobze, and Gianluca Russo
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DENV ,viruses ,CHIKV ,parasitic diseases ,virus diseases ,gabon ,General Materials Science ,biochemical phenomena, metabolism, and nutrition ,cameroon - Abstract
We report the molecular evidence of dengue virus (DENV) and chikungunya virus (CHIKV) infection in symptomatic individuals in Cameroon and Gabon, respectively. Arthropod-borne viruses (arboviruses) are distributed in the tropical or subtropical regions, with DENV having the highest burden. The morbidity and mortality related to arboviral diseases raise the concern of timely and efficient surveillance and care. Our aim was to assess the circulation of arboviruses [DENV, CHIKV, Zika virus (ZIKV)] among febrile patients in Dschang (West Cameroon) and Kyé-ossi (South Cameroon, border with Gabon and Equatorial Guinea). Dried blood spots were collected from 601 consenting febrile patients, and 194 Plasmodium spp.-negative samples were tested for the molecular detection of cases of DENV, CHIKV and ZIKV infection. Overall, no case of ZIKV infection was found, whereas one case of DENV infection and one case of CHIKV infection were detected in Dschang and Kyé-ossi, respectively, with the CHIKV-infected patient being resident in Gabon. Our findings suggest the need to establish an active surveillance of arbovirus transmission in Cameroon and bordering countries.
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- 2022
27. COVID-19 Vaccination Strategies and Their Adaptation to the Emergence of SARS-CoV-2 Variants
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Paola Stefanelli and Giovanni Rezza
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Pharmacology ,Infectious Diseases ,Drug Discovery ,Immunology ,Pharmacology (medical) - Abstract
About one year after the identification of the first cases of pneumonia due to a novel coronavirus in Wuhan, several vaccines against SARS-CoV-2/COVID-19 started to be approved for emergency use or authorized for early or limited use. The rapid development of effective vaccines based on different technological platforms represents an unprecedented success for vaccinology, providing a unique opportunity for a successful public health intervention. However, it is widely known that only a limited number of vaccine doses are usually available at the beginning of vaccination campaigns against an emerging virus; in this phase, protecting health care workers and reducing mortality rates is the priority. When a larger number of vaccines become available, the identification of the drivers of virus circulation coupled with the use of transmission blocking vaccines are key to achieve epidemic control through population immunity. However, as we learned during the vaccination campaigns against the pandemic coronavirus, several factors may hamper this process. Thus, flexible plans are required to obtain the best sustainable result with available tools, modulating vaccination strategies in accordance with improved scientific knowledge, and taking into account the duration of protective immune response, virus evolution, and changing epidemic dynamics.
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- 2022
28. First detection of SARS-CoV-2 lineage A.27 in Sardinia, Italy
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Alessandra, Lo Presti, Ferdinando, Coghe, Angela, Di Martino, Sara, Fais, Riccardo, Cappai, Manuela, Marra, Maria, Carollo, Marco, Crescenzi, Germano, Orrù, Giovanni, Rezza, and Paola, Stefanelli
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SARS-CoV-2 ,Mutation ,COVID-19 ,Humans ,Genome, Viral ,Phylogeny - Abstract
Multiple variants of SARS-CoV-2, since the end of 2020 have emerged in many geographical areas and are currently under surveillance worldwide highlighting the continuing need for genomic monitoring to detect variants previously not yet identified.In this study, we used whole-genome sequencing (WGS) and phylogenetic analysis to investigate A.27 lineage SARS-CoV-2 from Sardinia, Italy.The Italian A.27 lineage genomes from Sardinia appeared related in a clade with genomes from France. Among the key mutations identified in the spike protein, the N501Y and the L452R deserve attention as considered likely vaccine escape mutations. Additional mutations were also here reported.A combination of features could explain our data such as SARS-CoV-2 genetic variability, viral dynamics, the human genetic diversity of Sardinian populations, the island context probably subjected to different selective pressures. Molecular and genomic investigation is essential to promptly identify variants with specific mutations with potential impact on public health and vaccine formulation.
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- 2022
29. A SARS-CoV-2 Outbreak Among Nursing Home Residents Vaccinated with a Booster Dose of mRNA COVID-19 Vaccine
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Giancarlo Ripabelli, Michela Lucia Sammarco, Giovanni Rezza, Antonio D’Amico, Roberta De Dona, Mariagrazia Iafigliola, Albino Parente, Nicandro Samprati, Arturo Santagata, Carmen Adesso, Anna Natale, Michela Anna Di Palma, Fabio Cannizzaro, Cosimo Dentizzi, Paola Stefanelli, and Manuela Tamburro
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Aged, 80 and over ,Health (social science) ,COVID-19 Vaccines ,SARS-CoV-2 ,Third dose ,Public Health, Environmental and Occupational Health ,COVID-19 ,Impact of vaccination ,Disease Outbreaks ,Nursing Homes ,Elderly ,Mild disease ,Humans ,RNA, Messenger - Abstract
This study describes a SARS-CoV-2 outbreak caused by the Delta (B.1.617.2) variant in a nursing home in Central Italy during October-November 2021. Trained interviewers collected data from residents, staff, and administration officers with an agreed informed consent procedure. Thirty-two (44.5%) out of 72 residents (median age 89 years) and six (26.1%) of 23 healthcare workers were found to be infected with SARS-CoV-2. Infections occurred more often among residents with a higher index of independence in daily living activities, suggesting an increased risk for those with more interactions. Twenty-five infected residents (78.1%) received the booster dose of mRNA anti-COVID-19 vaccine 7 days before SARS-CoV-2 onset. Half of the infected residents had mild symptoms, and only three required hospitalisation, one of whom died from COVID-19 complications. The study underlines the effectiveness of a booster dose in providing a high protection against severe disease and hospitalisation even among vulnerable individuals infected with the Delta variant of concern.
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- 2022
30. Effectiveness of an mRNA vaccine booster dose against SARS-CoV-2 infection and severe COVID-19 in persons aged ≥60 years and other high-risk groups during predominant circulation of the delta variant in Italy, 19 July to 12 December 2021
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Massimo Fabiani, Maria Puopolo, Antonietta Filia, Chiara Sacco, Alberto Mateo-Urdiales, Stefania Spila Alegiani, Martina Del Manso, Fortunato D’Ancona, Fenicia Vescio, Marco Bressi, Daniele Petrone, Matteo Spuri, Maria Cristina Rota, Marco Massari, Roberto Da Cas, Cristina Morciano, Paola Stefanelli, Antonino Bella, Marco Tallon, Valeria Proietti, Andrea Siddu, Serena Battilomo, Anna Teresa Palamara, Patrizia Popoli, Silvio Brusaferro, Giovanni Rezza, Flavia Riccardo, Francesca Menniti Ippolito, and Patrizio Pezzotti
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Pharmacology ,Vaccines, Synthetic ,delta variant ,vaccine effectiveness ,SARS-CoV-2 ,SARS-CoV-2 infection ,Immunology ,COVID-19 ,Italy ,booster dose ,Drug Discovery ,Humans ,Molecular Medicine ,mRNA Vaccines - Abstract
Consolidated information on the effectiveness of COVID-19 booster vaccination in Europe are scarce. We assessed the effectiveness of a booster dose of an mRNA vaccine against any SARS-CoV-2 infection (symptomatic or asymptomatic) and severe COVID-19 (hospitalization or death) after over two months from administration among priority target groups (n = 18,524,568) during predominant circulation of the Delta variant in Italy (July–December 2021). Vaccine effectiveness (VE) against SARS-CoV-2 infection and, to a lesser extent, against severe COVID-19, among people ≥60 years and other high-risk groups (i.e. healthcare workers, residents in long-term-care facilities, and persons with comorbidities or immunocompromised), peaked in the time-interval 3–13 weeks (VE against infection = 67.2%, 95% confidence interval (CI): 62.5–71.3; VE against severe disease = 89.5%, 95% CI: 86.1–92.0) and then declined, waning 26 weeks after full primary vaccination (VE against infection = 12.2%, 95% CI: −4.7–26.4; VE against severe disease = 65.3%, 95% CI: 50.3–75.8). After 3–10 weeks from the administration of a booster dose, VE against infection and severe disease increased to 76.1% (95% CI: 70.4–80.7) and 93.0% (95% CI: 90.2–95.0), respectively. These results support the ongoing vaccination campaign in Italy, where the administration of a booster dose four months after completion of primary vaccination is recommended.
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- 2022
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31. Increasing Number of Cases Due to Candida auris in North Italy, July 2019–December 2022
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Camilla Sticchi, Roberto Raso, Lorenza Ferrara, Elena Vecchi, Loredana Ferrero, Daniela Filippi, Giuseppe Finotto, Elena Frassinelli, Carlo Silvestre, Susanna Zozzoli, Simone Ambretti, Giuseppe Diegoli, Carlo Gagliotti, Maria Luisa Moro, Enrico Ricchizzi, Fabio Tumietto, Francesca Russo, Michele Tonon, Francesco Maraglino, Giovanni Rezza, and Michela Sabbatucci
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Candida auris ,outbreak ,Italy ,healthcare-associated infections ,epidemiology ,General Medicine ,epidemic - Abstract
Candida auris is an emerging fungus that represents a serious health threat globally. In Italy, the first case was detected in July 2019. Then, one case was reported to the Ministry of Health (MoH) on January 2020. Nine months later, a huge number of cases were reported in northern Italy. Overall, 361 cases were detected in 17 healthcare facilities between July 2019 and December 2022 in the Liguria, Piedmont, Emilia-Romagna, and Veneto regions, including 146 (40.4%) deaths. The majority of cases (91.8%) were considered as colonised. Only one had a history of travel abroad. Microbiological data on seven isolates showed that all but one strain (85.7%) were resistant to fluconazole. All the environmental samples tested negative. Weekly screening of contacts was performed by the healthcare facilities. Infection prevention and control (IPC) measures were applied locally. The MoH nominated a National Reference Laboratory to characterise C. auris isolates and store the strains. In 2021, Italy posted two messages through the Epidemic Intelligence Information System (EPIS) to inform on the cases. On February 2022, a rapid risk assessment indicated a high risk for further spread within Italy, but a low risk of spread to other countries.
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- 2023
32. Did social distancing measures deployed for SARS-CoV-2/COVID-19 control have an impact on invasive meningococcal disease?
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Paola Stefanelli, Cecilia Fazio, Paola Vacca, Luigina Ambrosio, Giovanni Rezza, and Arianna Neri
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Coronavirus disease 2019 (COVID-19) ,business.industry ,Transmission (medicine) ,SARS-CoV-2 ,Social distance ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Incidence (epidemiology) ,Physical Distancing ,Public Health, Environmental and Occupational Health ,COVID-19 ,General Medicine ,Microbiology ,Meningococcal Infections ,Infectious Diseases ,Invasive meningococcal disease ,Environmental health ,Pandemic ,Communicable Disease Control ,Medicine ,Humans ,Parasitology ,business ,Early phase ,Pandemics - Abstract
We investigated the impact of social distancing measures, used to contain or mitigate SARS-CoV-2 spread, on the transmission of invasive meningococcal disease (IMD) in Italy. To this end, the temporal correlation between the implementation of lockdown measures in 2020 and IMD incidence was evaluated. A dramatic decline of IMD incidence was observed, suggesting that the measures applied to contain SARS-CoV-2 in Italy affected other infectious diseases transmitted through direct contact and droplets, at least in the early phase of the COVID-19 pandemic.
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- 2021
33. Effectiveness of Vaccination against SARS-CoV-2 Infection in the Pre-Delta Era: A Systematic Review and Meta-Analysis
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Angela Meggiolaro, Monica Sane Schepisi, Georgios F. Nikolaidis, Daniele Mipatrini, Andrea Siddu, and Giovanni Rezza
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Pharmacology ,Infectious Diseases ,Drug Discovery ,Immunology ,Pharmacology (medical) - Abstract
(1) Background: The objective of this study was to assess the effectiveness of SARS-CoV-2 vaccines in terms of prevention of disease and transmission in the pre-Delta era. The evaluation was narrowed to two mRNA vaccines and two modified adenovirus-vectored vaccines. (2) Methods: The overall risk of any SARS-CoV-2 infection confirmed by positive real-time Polymerase Chain Reaction (PCR) test was estimated in partially and fully vaccinated individuals. The evidence synthesis was pursued through a random-effects meta-analysis. The effect size was expressed as relative risk (RR) and RRR (RR reduction) of SARS-CoV-2 infection following vaccination. Heterogeneity was investigated through a between-study heterogeneity analysis and a subgroup meta-analysis. (3) Results: The systematic review identified 27 studies eligible for the quantitative synthesis. Partially vaccinated individuals presented a RRR = 73% (95%CI = 59–83%) for positive SARS-CoV-2 PCR (RR = 0.27) and a RRR=79% (95%CI = 30–93%) for symptomatic SARS-CoV-2 PCR (RR = 0.21). Fully vaccinated individuals showed a RRR = 94% (95%CI = 88–98%) for SARS-CoV-2 positive PCR (RR = 0.06) compared to unvaccinated individuals. The full BNT162b2 vaccination protocol achieved a RRR = 84–94% against any SARS-CoV-2-positive PCR and a RRR = 68–84% against symptomatic positive PCR. (4) Conclusions: The meta-analysis results suggest that full vaccination might block transmission. In particular, the risk of SARS-CoV-2 infection appeared higher for non-B.1.1.7 variants and individuals aged ≥69 years. Considering the high level of heterogeneity, these findings must be taken with caution. Further research on SARS-CoV-2 vaccine effectiveness against emerging SARS-CoV-2 variants is encouraged.
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- 2021
34. Effectiveness of vaccination against symptomatic and asymptomatic SARS-CoV-2 infection: a systematic review and meta-analysis
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Daniele Mipatrini, Angela Meggiolaro, Andrea Siddu, George Nikolaidis, Monica Sane Schepisi, and Giovanni Rezza
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medicine.medical_specialty ,education.field_of_study ,business.industry ,Transmission (medicine) ,Population ,Disease ,Asymptomatic ,Vaccination ,Real-time polymerase chain reaction ,Relative risk ,Internal medicine ,Meta-analysis ,medicine ,medicine.symptom ,business ,education - Abstract
OBJECTIVETo assess the effectiveness of SARS-CoV-2 vaccines in terms of prevention of disease and transmission. The evaluation was narrowed to two mRNA vaccines and two modified adenovirus vectored vaccines.METHODSA frequentist random effects meta-analysis was carried out after data extraction. Risk of bias of the included studies was assessed using New-Castle-Ottawa Scale. The overall risk of SARS-CoV-2 infection confirmed by real time Polymerase Chain Reaction (PCR) was estimated in partially and fully vaccinated individuals. The effect size was expressed as Relative Risk (RR) and RRR (RR reduction) of SARS-CoV-2 infection after vaccination. Potential sources of heterogeneity were investigated through between-study heterogeneity analysis and subgroup meta-analysis.RESULTSThe systematic review identified 27 studies eligible for the quantitative synthesis. Partially vaccinated individuals presented a RRR=73% (95%CI=59%-83%) for any positive SARS-CoV-2 PCR (RR=0.27) and a RRR=79% (95%CI=30%-93%) for symptomatic SARS-CoV-2 PCR (RR=0.21). Fully vaccinated individuals showed a RRR=94% (95%CI=88%-98%) for any SARS-CoV-2 positive PCR (RR=0.06) compared to unvaccinated. According to the subgroup meta-analysis, full BNT162b2 vaccination protocol achieved a RRR=84%-94% against any SARS-CoV-2 positive PCR and a RRR=68%-84% against symptomatic positive PCR. The RR for any SARS-CoV-2 positive PCR remained higher within elderly groups aged ≥69 years (RR=0.12-0.15) compared to younger individuals (RR=0.05-0.12). The RR against B.1.351 infection approached 0.40 for any positive PCR and 0.36 for symptomatic SARS-COV-2 while the RR of any B.1.1.7 infection was 0.14.CONCLUSIONThe current licensed vaccines may be transmission blocking, especially after full vaccination protocol. Given the substantial heterogeneity, results should be interpreted with caution. Subgroups meta-analyses suggested that the risk of any SARS-CoV-2 infection may be higher for non-B.1.1.7 variants and individuals aged ≥69 years. Further data and longer follow-up are required to investigate additional sources of heterogeneity and the effectiveness of SARS-CoV-2 vaccination within population subgroups.STRENGTHSReal-world data suggest that the current licensed vaccines may be transmission blocking, in particular after full vaccination protocol.The risk of any SARS-CoV-2 infection either symptomatic or asymptomatic, may be higher for non-B.1.1.7 variants and individuals aged ≥69 years.LIMITATIONSGiven the substantial heterogeneity encountered in this meta-analysis, results should be interpreted with cautionFur ther evidence on the impact of SARS-CoV-2 variants are vital in order to monitor mutations associated with vaccine escape
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- 2021
35. A community-acquired Legionnaires’ disease outbreak caused by Legionella pneumophila serogroup 2: an uncommon event, Italy, August to October 2018
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Antonietta Girolamo, Maria Scaturro, Arnaldo Caruso, Giovanni Rezza, Maria Gramegna, Michele Magoni, Silvia Corbellini, Cinzia Giagulli, Daria Barberis, Maria Luisa Ricci, Maria Cristina Rota, Maria Grazia Caporali, Chiara Romano, Antonio Piro, and Danilo Cereda
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0301 basic medicine ,Veterinary medicine ,Legionnaires' disease ,Epidemiology ,Legionella ,river ,030106 microbiology ,Serogroup ,River water ,Disease Outbreaks ,Legionella pneumophila ,Serology ,Italy ,outbreak ,Humans ,Legionnaires' Disease ,03 medical and health sciences ,0302 clinical medicine ,Environmental water ,Virology ,medicine ,030212 general & internal medicine ,Typing ,biology ,Outbreaks ,Public Health, Environmental and Occupational Health ,Outbreak ,biology.organism_classification ,medicine.disease ,Geography ,Legionella pneumophila serogroup - Abstract
In September 2018 in Brescia province, northern Italy, an outbreak of Legionnaires' disease (LD) caused by Legionella pneumophila serogroup 2 (Lp2) occurred. The 33 cases (two fatal) resided in seven municipalities along the Chiese river. All cases were negative by urinary antigen test (UAT) and most were diagnosed by real-time PCR and serology. In only three cases, respiratory sample cultures were positive, and Lp2 was identified and typed as sequence type (ST)1455. In another three cases, nested sequence-based typing was directly applied to respiratory samples, which provided allelic profiles highly similar to ST1455. An environmental investigation was undertaken immediately and water samples were collected from private homes, municipal water systems, cooling towers and the river. Overall, 533 environmental water samples were analysed and 34 were positive for Lp. Of these, only three samples, all collected from the Chiese river, were Lp2 ST1455. If and how the river water could have been aerosolised causing the LD cases remains unexplained. This outbreak, the first to our knowledge caused by Lp2, highlights the limits of UAT for LD diagnosis, underlining the importance of adopting multiple tests to ensure that serogroups other than serogroup 1, as well as other Legionella species, are identified.
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- 2021
36. Identification and characterization of SARS-CoV-2 clusters in the EU/EEA in the first pandemic wave: additional elements to trace the route of the virus
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Angela Di Martino, Silvia Fillo, Filippo Molinari, Stefano Palomba, Giovanni Faggioni, Vanessa Vera Fain, Florigio Lista, Riccardo De Santis, Francesco Giordani, Alessandra Lo Presti, Giancarlo Petralito, Antonella Fortunato, Anna Anselmo, Giovanni Rezza, and Paola Stefanelli
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Microbiology (medical) ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Genome, Viral ,Biology ,Microbiology ,Genome ,Virus ,Article ,Cluster analysis ,Mutation Rate ,Pandemic ,Genetics ,Humans ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Phylogenetic tree ,SARS-CoV-2 ,COVID-19 ,Europe ,Infectious Diseases ,SNVs analysis ,Italy ,Evolutionary biology ,Mutation ,Identification (biology) ,Early phase - Abstract
A high-quality dataset of 3289 complete SARS-CoV-2 genomes collected in Europe and European Economic Area (EAA) in the early phase of the first wave of the pandemic was analyzed. Among all single nucleotide mutations, 41 had a frequency ≥ 1%, and the phylogenetic analysis showed at least 6 clusters with a specific mutational profile. These clusters were differentially distributed in the EU/EEA, showing a statistically significant association with the geographic origin. The analysis highlighted that the mutations C14408T and C14805T played an important role in clusters selection and further virus spread. Moreover, the molecular analysis suggests that the SARS-CoV-2 strain responsible for the first Italian confirmed COVID-19 case was already circulating outside the country.
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- 2021
37. Prevalence of SARS-CoV-2 infection in Italian pediatric population: a regional seroepidemiological study
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Alessandro Amaddeo, Egidio Barbi, Manola Comar, Tamara Strajn, Paola Di Rocco, Giovanni Rezza, Simone Benvenuto, Paola Stefanelli, Francesco Maria Risso, Giorgio Fedele, Marzia Lazzerini, Comar, Manola, Benvenuto, Simone, Lazzerini, Marzia, Fedele, Giorgio, Barbi, Egidio, Amaddeo, Alessandro, Maria Risso, Francesco, Strajn, Tamara, Di Rocco, Paola, Stefanelli, Paola, and Rezza, Giovanni
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Male ,medicine.medical_specialty ,Adolescent ,Cross-sectional study ,Pneumonia, Viral ,Seroprevalence ,Antibodies, Viral ,Pediatrics ,Asymptomatic ,RJ1-570 ,03 medical and health sciences ,0302 clinical medicine ,children ,Seroepidemiologic Studies ,030225 pediatrics ,Internal medicine ,Pandemic ,Prevalence ,Humans ,Medicine ,Blood test ,Infection control ,neutralizing antibodies ,030212 general & internal medicine ,Child ,Pediatric ,medicine.diagnostic_test ,SARS-CoV-2 ,business.industry ,Public health ,Covid-19 ,COVID-19 ,Infant ,Cross-Sectional Studies ,Italy ,Child, Preschool ,Immunoglobulin G ,Cohort ,Commentary ,Female ,IgG antibodies ,medicine.symptom ,business - Abstract
Background Data on the effective burden of the SARS-CoV-2 pandemic in pediatric population are very limited, mostly because of the higher rate of asymptomatic or paucisymptomatic cases among children. Updated data on COVID-19 prevalence are needed for their relevance in public health and for infection control policies. In this single-centre cross-sectional study we aimed to assess prevalence of SARS-CoV-2 infection through IgG antibodies detection in an Italian pediatric cohort. Methods The study was conducted in January 2021 among both inpatients and outpatients referring to Research Institute for Maternal and Child Health “Burlo Garofolo” in Trieste, Friuli Venezia-Giulia, Italy, who needed for blood test for any reason. Collected samples were sent to Italian National Institute of Health for analysis through chemiluminescent immunoassay (CLIA). Results One hundred sixty-nine patients were included in the study, with a median age of 10.5 ± 4.1 years, an equal distribution for sex (49.7% female patients), and a 55.6% prevalence of comorbidities. Prevalence of anti-SARS-CoV-2 trimeric Spike protein IgG antibodies was 9.5% (n = 16), with a medium titre of 482.3 ± 387.1 BAU/mL. Having an infected cohabitant strongly correlated with IgG positivity (OR 23.83, 95% CI 7.19–78.98, p Conclusion We assessed a 9.5% SARS-CoV-2 seroprevalence in a pediatric cohort from Friuli Venezia-Giulia region in January 2021, showing a substantial increase after the second peak of the pandemic occurred starting from October 2020, compared to 1% prevalence observed by National Institute of Statistics (ISTAT) in July 2020.
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- 2021
38. Epidemiological and clinical suspicion of congenital Zika virus infection: Serological findings in mothers and children from Brazil
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Everton da Silva Batista, Janeusa Rita Leite Primo Chagas, Ana Gabriela Passos do Prado Paschoal, Claudia Fortuna, Giovanni Rezza, Maria Elena Remoli, Cristiano Fiorentini, Deijamile Virginia Novais Gama, Giulietta Venturi, Pedro José da Silva Júnior, Eleonora Benedetti, Rita Maria Alves, Davi Hasselmann Barros, and Antonello Amendola
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Adult ,Diagnostic Imaging ,serological tests ,Microcephaly ,diagnosis ,Population ,Antibodies, Viral ,Dengue fever ,Zika virus ,Serology ,03 medical and health sciences ,0302 clinical medicine ,flavivirus ,Neutralization Tests ,Virology ,medicine ,Humans ,Public Health Surveillance ,Serologic Tests ,microcephaly ,030212 general & internal medicine ,education ,Research Articles ,neutralization test ,Pregnancy ,education.field_of_study ,biology ,Zika Virus Infection ,business.industry ,Infant, Newborn ,Infant ,Zika Virus ,medicine.disease ,biology.organism_classification ,Antibodies, Neutralizing ,Infectious Disease Transmission, Vertical ,congenital infection ,Flavivirus ,Phenotype ,Infectious Diseases ,Immunoglobulin M ,Child, Preschool ,biology.protein ,030211 gastroenterology & hepatology ,business ,Brazil ,Research Article - Abstract
The emergence of Zika virus in the Americas has caused an increase of babies born with microcephaly or other neurological malformations. The differential diagnosis of Zika infection, particularly serological diagnosis, is an important but complex issue. In this study, we describe clinical manifestations of 94 suspected cases of congenital Zika from Bahia state, Brazil, and the results of serological tests performed on children and/or their mothers at an average of 71 days after birth. Anti‐Zika immunoglobulin M (IgM) antibodies were detected in 44.4% and in 7.1% of samples from mothers and children, respectively. Nearly all the IgM, and 92% of immunoglobulin G positive results were confirmed by neutralization test. Zika specific neutralizing antibodies were detected in as much as 90.4% of the cases. Moreover, dengue specific neutralizing antibodies were detected in 79.0% of Zika seropositive mothers. In conclusion, Zika IgM negative results should be considered with caution, due to a possible rapid loss of sensitivity after birth, while the NS1‐based Zika IgM enzyme‐linked immunosorbent assay test we have used has demonstrated to be highly specific. In a high percentage of cases, Zika specific neutralizing antibodies were detected, which are indicative of a past Zika infection, probably occurred during pregnancy in this population., Highlight In this study we have analyzed serum samples collected a mean of 71 days after birth from 94 suspected congenital Zika cases.Our results have shown a high percentage of positive neutralization test results for ZIKV, and also DENV, but low prevalence of anti‐ZIKV IgM antibodies.Our data confirm the difficulty of an accurate retrospective diagnosis of ZIKV congenital infection.
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- 2019
39. Adult vaccination as the cornerstone of successful ageing: the case of herpes zoster vaccination. A European Interdisciplinary Council on Ageing (EICA) expert focus group
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Fiona Ecarnot, Jean-Pierre Michel, Stefania Maggi, Giovanni Gabutti, Giovanni Rezza, Roberto Bernabei, and Sandro Giuffrida
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Adult ,Aging ,medicine.medical_specialty ,media_common.quotation_subject ,Herpes zoster ,medicine.disease_cause ,NO ,Scientific evidence ,03 medical and health sciences ,0302 clinical medicine ,Co-administration ,Vaccination ,Geriatrics and Gerontology ,Health care ,medicine ,Herpes Zoster Vaccine ,Humans ,030212 general & internal medicine ,Intensive care medicine ,media_common ,business.industry ,Varicella zoster virus ,Focus Groups ,Focus group ,Rash ,Europe ,Immunization ,medicine.symptom ,business ,Publicity ,030217 neurology & neurosurgery - Abstract
Herpes zoster (HZ) is a painful cutaneous rash with vesicular lesions, lasting up to 3 weeks, and caused by reactivation of the latent varicella zoster virus (VZV). It may be associated with complications, the most feared being post-herpetic neuralgia. Effective vaccines are available to prevent HZ, but uptake remains low. We report here the conclusions of an expert focus group convened by the European Interdisciplinary Council on Ageing (EICA). The group discussed how existing recommendations regarding HZ vaccination could be better implemented, and how compliance and coverage with HZ vaccination could be enhanced. This report proposes strategies to increase awareness of HZ and its vaccine, enhance vaccine uptake, and educate regarding the role of prevention, including immunization, as a means to "age well". A key strategy that could rapidly and easily be implemented at low cost is co-administration of HZ vaccine with other vaccines scheduled in the target age group. The scientific evidence surrounding the safety and efficacy of co-administration is discussed. Other strategies, such as active calls, publicity campaigns and national vaccine registries are also outlined. There is a compelling need for a full consensus document that carries weight across all the healthcare professions involved in vaccination, to issue simple and basic recommendations for all healthcare providers.
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- 2019
40. Vaccine preventable invasive bacterial diseases in Italy: A comparison between the national surveillance system and recorded hospitalizations, 2007–2016
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Annalisa Pantosti, Flavia Riccardo, Stefania Bellino, Giovanni Rezza, Francesca Lucaroni, Marina Cerquetti, Patrizio Pezzotti, and Paola Stefanelli
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Adult ,Male ,medicine.medical_specialty ,Haemophilus Infections ,Adolescent ,030231 tropical medicine ,Meningitis, Meningococcal ,medicine.disease_cause ,Haemophilus influenzae ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Streptococcus pneumoniae ,medicine ,Hospital discharge ,Humans ,030212 general & internal medicine ,Child ,Meningitis, Haemophilus ,General Veterinary ,General Immunology and Microbiology ,Meningitis, Pneumococcal ,business.industry ,Incidence ,Neisseria meningitidis ,Infant, Newborn ,Public Health, Environmental and Occupational Health ,Infant ,Bacterial Infections ,Middle Aged ,Hospital Records ,medicine.disease ,Patient Discharge ,Hospitalization ,Meningococcal Infections ,Infectious Diseases ,Italy ,Child, Preschool ,Epidemiological Monitoring ,Disease Notification ,Etiology ,Regression Analysis ,Molecular Medicine ,Female ,Bacterial meningitis ,business ,Meningitis - Abstract
Background Vaccine-preventable invasive bacterial diseases (IBDs) caused by Neisseria meningitidis (Nm), Streptococcus pneumoniae (Sp), and Haemophilus influenzae (Hi) have been notified in Italy since 2007 without assessing reporting completeness. Methods Our study compared the number of cases of IBDs identified from the Italian Hospital Discharge Records (HDRs), using specific diagnostic ICD-9-CM codes, with those notified to the National Surveillance System (NSS) from 2007 to 2016. A multinomial logistic regression model was used to impute the aetiology of all discharges with a diagnosis of unspecified bacterial meningitis. Results Over a 10-year period, 14,243 hospital discharges with diagnosis of IBD were estimated in Italy (12,671 with specified aetiology and 1,572 with imputed aetiology). Among those, 2,513 (17.6%) were caused by Nm, 10,441 (73.3%) by Sp, and 1289 (9.1%) by Hi. Most invasive meningococcal diseases were coded as meningitis (72.3%), while Hi and Sp were more frequently coded as septicaemia (51.6% and 60.4%, respectively). The highest mean annual incidence rate was found for IBD caused by Sp (1.74 per 100,000), followed by Nm (0.42 per 100,000) and by Hi (0.21 per 100,000). Comparing NSS with HDR data, we found an initially high underreporting of all IBDs, and particularly for Hi. Data from the two systems overlapped in more recent years, due to an improved reporting completeness. The increasing IBD incidence observed in NSS data was not confirmed by HDR data trends, although with pathogen-related differences with Hi cases rising in both data sources, suggesting that is mainly due to an improved disease notification rather than to a true incidence increase. Conclusions Comparing surveillance data with other data sources is useful to better interpret observed trends of notifiable diseases.
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- 2019
41. TBE in Italy
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Valentina Tagliapietra, Flavia Riccardo, Martina Del Manso, and Giovanni Rezza
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0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,030231 tropical medicine - Abstract
Italy is considered a low-incidence country for tick-borne encephalitis (TBE) in Europe.1 Areas at higher risk for TBE in Italy are geographically clustered in the forested and mountainous regions and provinces in the north east part of the country, as suggested by TBE case series published over the last decade.2-5 A national enhanced surveillance system for TBE has been established since 2017.6 Before this, information on the occurrence of TBE cases at the national level in Italy was lacking. Both incidence rates and the geographical distribution of the disease were mostly inferred from endemic areas where surveillance was already in place, ad hoc studies and international literature.
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- 2021
42. COVID-19 response: effectiveness of weekly rapid risk assessments, Italy
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Flavia Riccardo, Giorgio Guzzetta, Alberto Mateo Urdiales, Martina Del Manso, Xanthi Andrianou, Antonino Bella, Patrizio Pezzotti, Simona Carbone, Tiziana De Vito, Francesco Maraglino, Vittorio Demicheli, Claudio Dario, Enrico Coscioni, Giovanni Rezza, Andrea Urbani, Stefano Merler, and Silvio Brusaferro
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Humans ,Italy ,Risk Assessment ,SARS-CoV-2 ,COVID-19 ,Epidemics ,Lessons from the Field ,Public Health, Environmental and Occupational Health - Abstract
After Italy's first national restriction measures in 2020, a robust approach was needed to monitor the emerging epidemic of coronavirus disease 2019 (COVID-19) at subnational level and provide data to inform the strengthening or easing of epidemic control measures.We adapted the European Centre for Disease Prevention and Control rapid risk assessment tool by including quantitative and qualitative indicators from existing national surveillance systems. We defined COVID-19 risk as a combination of the probability of uncontrolled transmission of severe acute respiratory syndrome coronavirus 2 and of an unsustainable impact of COVID-19 cases on hospital services, adjusted in relation to the health system's resilience. The monitoring system was implemented with no additional cost in May 2020.The infectious diseases surveillance system in Italy uses consistent data collection methods across the country's decentralized regions and autonomous provinces.Weekly risk assessments using this approach were sustainable in monitoring the epidemic at regional level from 4 May 2020 to 24 September 2021. The tool provided reliable assessments of when and where a rapid increase in demand for health-care services would occur if control or mitigation measures were not increased in the following 3 weeks.Although the system worked well, framing the risk assessment tool in a legal decree hampered its flexibility, as indicators could not be changed without changing the law. The relative complexity of the tool, the impossibility of real-time validation and its use for the definition of restrictions posed communication challenges.Après avoir pris ses premières mesures de restriction nationales en 2020, l'Italie avait besoin d'une approche solide pour surveiller l'épidémie naissante de maladie à coronavirus 2019 (COVID-19) au niveau régional, et fournir les données permettant de renforcer ou d'alléger les mesures destinées à l'endiguer.Nous avons adapté l'outil d'évaluation rapide des risques du Centre européen de prévention et de contrôle des maladies en y intégrant des indicateurs quantitatifs et qualitatifs issus des systèmes de surveillance nationaux existants. Pour définir le risque lié à la COVID-19, nous avons associé la probabilité d'une transmission incontrôlée du coronavirus 2 du syndrome respiratoire aigu sévère, à l'impact immédiat des cas de COVID-19 sur les services hospitaliers, en procédant à des ajustements selon la résilience du système de soins de santé. Le dispositif de surveillance a été mis en œuvre en mai 2020 sans entraîner de coûts supplémentaires.En Italie, le système de surveillance des maladies infectieuses repose sur des méthodes uniformes de collecte de données dans les provinces autonomes et régions décentralisées à travers le pays.Les évaluations des risques réalisées toutes les semaines avec cette approche ont permis de surveiller l'épidémie à l'échelle régionale du 4 mai 2020 au 24 septembre 2021. L'outil a identifié les dates et lieux susceptibles de connaître une augmentation rapide de la demande en services de soins de santé si aucune mesure supplémentaire de contrôle et de lutte n'était prise dans les trois semaines.Bien que le système ait fonctionné, inscrire l'outil d'évaluation des risques dans un décret législatif a réduit sa flexibilité, car les indicateurs ne pouvaient être modifiés sans réformer la loi. La relative complexité de l'outil, l'impossibilité de procéder à une validation en temps réel et son usage pour imposer des restrictions ont posé des problèmes de communication.Tras las primeras medidas nacionales de restricción en Italia en 2020, se necesitaba un enfoque sólido para supervisar la epidemia emergente de la coronavirosis de 2019 (COVID-19) a nivel subnacional y proporcionar datos que informaran sobre el refuerzo o la flexibilización de las medidas de contención de la epidemia.Se adaptó la herramienta de valoración rápida de riesgos del Centro Europeo para la Prevención y el Control de las Enfermedades, al incluir indicadores cuantitativos y cualitativos de los sistemas nacionales de vigilancia existentes. Se definió el riesgo de la COVID-19 como una combinación de la probabilidad de transmisión descontrolada del coronavirus del síndrome respiratorio agudo grave de tipo 2 y de un efecto no sostenible de los casos de la COVID-19 en los servicios hospitalarios, y se ajustó en relación con la capacidad de recuperación del sistema sanitario. El sistema de supervisión se aplicó sin costes adicionales en mayo de 2020.El sistema de vigilancia de las enfermedades infecciosas en Italia aplica métodos de recopilación de datos coherentes en todas las regiones y provincias autónomas descentralizadas del país.Las valoraciones semanales de los riesgos mediante este enfoque fueron sostenibles en la supervisión de la epidemia a nivel regional entre el 4 de mayo de 2020 y el 24 de septiembre de 2021. La herramienta proporcionó valoraciones fiables de cuándo y dónde se produciría un rápido aumento de la demanda de servicios sanitarios si no se incrementaban las medidas de contención o mitigación en las tres semanas siguientes.Aunque el sistema funcionó bien, el hecho de enmarcar la herramienta de valoración de los riesgos en un decreto legal dificultó su flexibilidad, ya que los indicadores no se podían modificar sin cambiar la ley. La relativa complejidad de la herramienta, la imposibilidad de validación en tiempo real y su uso para la definición de las restricciones plantearon problemas de comunicación.المشكلة بعد إجراءات التقييد الوطنية الأولى بإيطاليا في عام 2020، كانت هناك حاجة إلى أسلوب فعّال لرصد الوباء المستجد لمرض فيروس كورونا 2019 (كوفيد 19) على المستوى دون الوطني، وتوفير البيانات لدراسة إمكانية تعزيز أو تخفيف تدابير مكافحة الوباء. الأسلوب قمنا بتكييف أداة لتقييم المخاطر السريعة تابعة للمركز الأوروبي للوقاية من الأمراض ومكافحتها، وذلك من خلال تضمين مؤشرات كمية ونوعية من أنظمة المراقبة الوطنية الحالية. كذلك قمنا بتعريف مخاطر كوفيد 19 على أنها مزيج من احتمالية الانتقال غير المُقيد لمتلازمة الجهاز التنفسي الحادة الشديدة لفيروس كورونا 2، والتأثير غير المستدام لحالات كوفيد 19 على خدمات المستشفيات، مع تعديلها فيما يتعلق بمرونة النظام الصحي. تم تنفيذ نظام المراقبة دون تكلفة إضافية في مايو/أيار 2020. المواقع المحلية يستخدم نظام مراقبة الأمراض المعدية في إيطاليا طرقًا متسقة لجمع البيانات عبر المناطق اللامركزية في البلد والمقاطعات المستقلة. التغيّرات ذات الصلة كانت تقييمات المخاطر الأسبوعية باستخدام هذا الأسلوب مستدامة في رصد الوباء على المستوى الإقليمي، طوال الفترة من 4 مايو/أيار 2020 إلى 24 سبتمبر/أيلول 2021. قدمت الأداة تقييمات موثوقة حول توقيت ومكان حدوث زيادة سريعة في الطلب على خدمات الرعاية الصحية في حالة السيطرة، أو إذا لم يتم زيادة تدابير التخفيف في الأسابيع الثلاثة التالية. الدروس المستفادة على الرغم من أن النظام قد عمل بشكل جيد، إلا أن صياغة أداة تقييم المخاطر في مرسوم قانوني أعاقت مرونته، حيث لا يمكن تغيير المؤشرات دون تغيير القانون. أدى التعقيد النسبي للأداة، واستحالة التحقق من فعاليتها في الوقت الفعلي، واستخدامها لتعريف القيود، إلى ظهور تحديات في التواصل.问题 2020 年意大利首次实施全国性限制措施后,需要采取可靠方法以监测新型冠状病毒肺炎(新冠肺炎)疫情在地方层面的蔓延情况,并提供数据以表明是否需要加强或放松疫情控制措施。方法 通过纳入现有国家监测系统的定量和定性指标,我们调整了欧洲疾病预防和控制中心的快速风险评估工具。我们将新型冠状病毒肺炎风险综合定义为严重急性呼吸系统综合症冠状病毒 2 不受控制传播的可能性以及新型冠状病毒肺炎病例对医院服务的非持续性影响,并根据卫生系统的顺应力进行了调整。2020 年 5 月,在没有产生额外成本的前提下实施了监测系统。当地状况 意大利传染病监测系统在全国各个分散的地区和自治省统一使用相同的数据收集方法。相关变化 在 2020 年 5 月 4 日至 2021 年 9 月 24 日期间,使用这种方法开展的每周风险评估在监测区域层面疫情情况方面具有可持续性。该工具能够可靠地评估,如果在接下来的 3 周内没有加强控制或缓解措施,何时何地医疗保健服务需求会迅速增加。经验教训 尽管该系统运作良好,但将风险评估工具纳入法令范畴限制了其灵活性,因为若不更改法律,则无法变更指标。该工具的相对复杂性、实时验证的不可能性及其在法规限定方面的用途导致产生了沟通挑战。.После первых национальных ограничительных мер в Италии в 2020 году потребовался активный подход для мониторинга зарождающейся эпидемии коронавирусной инфекции 2019 года (COVID-19) на субнациональном уровне и для предоставления данных для обоснования усиления или ослабления мер по борьбе с эпидемией.Авторы адаптировали инструмент для оперативных оценок рисков Европейского центра по контролю и профилактике заболеваний, включив в него количественные и качественные показатели из существующих национальных систем эпиднадзора. Авторы определили риск COVID-19 как комбинацию вероятности неконтролируемой передачи тяжелого острого респираторного синдрома, вызванного коронавирусом-2, и разрушительного воздействия случаев COVID-19 на больничное обслуживание, которая скорректирована с учетом устойчивости системы здравоохранения. Система мониторинга была внедрена без каких-либо дополнительных затрат в мае 2020 года.В системе эпиднадзора за инфекционными заболеваниями в Италии используются последовательные методы сбора данных по децентрализованным регионам и автономным провинциям страны.Еженедельные оценки рисков с использованием данного подхода регулярно применялись при мониторинге эпидемии на региональном уровне с 4 мая 2020 года по 24 сентября 2021 года. Инструмент обеспечил надежную оценку того, когда и где может произойти быстрое увеличение спроса на медицинские услуги, если меры по борьбе или смягчению последствий не будут усилены в течение следующих 3 недель.Несмотря на то что система работала эффективно, включение инструмента для оценок рисков в юридические постановления ограничивало его гибкость, поскольку показатели не могли быть изменены без изменения закона. Относительная сложность инструмента, невозможность проверки в реальном времени и его использование для определения ограничений создают проблемы коммуникации.
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- 2021
43. Genomic Analysis and Lineage Identification of SARS-CoV-2 Strains in Migrants Accessing Europe Through the Libyan Route
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Fabio Tramuto, Stefano Reale, Alessandra Lo Presti, Francesco Vitale, Claudio Pulvirenti, Giovanni Rezza, Fabrizio Vitale, Giuseppa Purpari, Carmelo Massimo Maida, Salvatore Zichichi, Silvia Scibetta, Walter Mazzucco, and Paola Stefanelli
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0106 biological sciences ,Lineage (genetic) ,viruses ,Pilot Projects ,Genomics ,Libya ,asylum-seeker ,010603 evolutionary biology ,01 natural sciences ,law.invention ,03 medical and health sciences ,Mediterranean sea ,Phylogenetics ,law ,Mediterranean Sea ,Humans ,Genetic variability ,Sicily ,Phylogeny ,030304 developmental biology ,Transients and Migrants ,0303 health sciences ,Phylogenetic tree ,SARS-CoV-2 ,lcsh:Public aspects of medicine ,fungi ,Public Health, Environmental and Occupational Health ,COVID-19 ,virus diseases ,lcsh:RA1-1270 ,molecular surveillance ,Brief Research Report ,language.human_language ,Europe ,migrant ,Geography ,Transmission (mechanics) ,Evolutionary biology ,NGS ,Africa ,language ,Public Health ,Sicilian - Abstract
Many African countries, representing the origin of the majority of refugees, asylum-seekers, and other migrants, toward regions bordering on the Mediterranean area, are experiencing sustained local transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Sicily is one of the main entry gates of migrants crossing into Europe. We conducted a pilot study, based on the full-genome sequencing of SARS-CoV-2 strains isolated from migrants coming to Sicily by crossing the Mediterranean Sea, with the aim to investigate the viral genome polymorphism and to describe their genetic variations and the phylogenetic relationships. On June 21, a nongovernmental organization vessel rescued 210 migrants crossing the Mediterranean Sea from Libya to Sicily. Of them, 13.4% tested positive for SARS-CoV-2. Eighteen whole genome sequences were obtained to explore viral genetic variability. All but one of the sequences clustered with other viral African strains within the lineage A, whereas only one intermixed among B.1 lineage genomes. Our findings documented that most of the investigated migrants acquired SARS-CoV-2 infection before landing in Sicily. However, SARS-CoV-2 transmission during travel or in overcrowded Libyan immigrant camps and/or illegal transport boats could not be ruled out. SARS-CoV-2 molecular surveillance on migrants arriving in Europe through the Sicilian gate may improve the knowledge of global SARS-CoV-2 transmission dynamic also in light of the emergence of new variants.
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- 2021
44. Co-circulation of SARS-CoV-2 variants B.1.1.7 and P.1
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Silvio Brusaferro, Marco Ajelli, Valentina Marziano, Stefano Merler, Filippo Trentini, Giovanni Rezza, Paola Stefanelli, Carla Molina Grane, Patrizio Pezzotti, Giorgio Guzzetta, Xanthi Andrianou, Mattia Manica, Martina Del Manso, Piero Poletti, and Alessia Mammone
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0303 health sciences ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Lineage (evolution) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Biology ,Confidence interval ,3. Good health ,03 medical and health sciences ,0302 clinical medicine ,Pandemic ,National level ,030212 general & internal medicine ,030304 developmental biology ,Demography - Abstract
SARS-CoV-2 variants of concern (B.1.1.7, P.1 and B.1.351) have emerged in different continents of the world. To date, little information is available on their ecological interactions. Based on two genomic surveillance surveys conducted on February 18 and March 18, 2021 across the whole Italian territory and covering over 3,000 clinical samples, we found significant co-circulation of B.1.1.7 and P.1. We showed that B.1.1.7 was already dominant on February 18 in a majority of regions/autonomous provinces (national prevalence 54%) and almost completely replaced historical lineages by March 18 (dominant in all regions/autonomous provinces, national prevalence 86%). At the same time, we found a substantial proportion of cases of the P.1 lineage on February 18, almost exclusively in Central Italy (with an overall prevalence in the macro-area of 18%), which remained at similar values on March 18, suggesting the inability by this lineage to outcompete B.1.1.7. Only 9 cases from variant B.1.351 were identified in the two surveys. At the national level, we estimated a mean relative transmissibility of B.1.1.7 (compared to historical lineages) ranging between 1.55 and 1.57 (with confidence intervals between 1.45 and 1.66). The relative transmissibility of P.1 estimated at the national level varied according to the assumed degree of cross-protection granted by infection with other lineages and ranged from 1.12 (95%CI 1.03-1.23) in the case of complete immune evasion by P.1 to 1.39 (95%CI 1.26-1.56) in the case of complete cross-protection. These observations may have important consequences on the assessment of future pandemic scenarios.
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- 2021
45. Molecular epidemiological investigation of Mayaro virus in febrile patients from Goiania City, 2017-2018
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Filipe Romero Rebello Moreira, Isabele Pereira Tannous, Marco Tulio Antonio García-Zapata, Renato S. Aguiar, Elisângela de Paula Silveira-Lacerda, Elisângela Gomes da Silva, Hugo Delleon Silva, Carlos Eduardo Anunciação, Mariane Talon de Menezes, Adriano Roberto Vieira de Sousa, Gabrielly R. Abrantes, Alice Laschuk Herlinger, Giovanni Rezza, Marina Machado dos Santos, Amilcar Tanuri, Juliana Pires Ribeiro, Rodrigo Brindeiro, Natália Santana do Nascimento, Sandra Brunini, Clever Gomes Cardoso, Richard Araújo Maia, Kauana Ferreira Arruda, Orlando C. Ferreira, Jordana Faria Corrêa, and Rafael Moura Barbosa
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0301 basic medicine ,Microbiology (medical) ,Adult ,Male ,medicine.medical_specialty ,Fever ,viruses ,030106 microbiology ,Alphavirus ,Dengue virus ,Biology ,medicine.disease_cause ,Microbiology ,Virus ,Dengue fever ,03 medical and health sciences ,Young Adult ,Genotype ,Epidemiology ,Genetics ,medicine ,Prevalence ,Humans ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Aged ,Molecular Epidemiology ,Transmission (medicine) ,Alphavirus Infections ,Incidence ,virus diseases ,Outbreak ,biochemical phenomena, metabolism, and nutrition ,Middle Aged ,medicine.disease ,Rash ,Virology ,030104 developmental biology ,Infectious Diseases ,Female ,medicine.symptom ,Brazil - Abstract
Mayaro virus (MAYV) has historically been associated with sylvatic transmission; however, urban outbreaks have been reported in Brazil, including cases of co-detection with dengue virus (DENV). Therefore, we performed a molecular survey to investigate MAYV circulation and cocirculation with DENV within Goiania, a major city in Central-West Brazil. Among 375 subjects with arbovirus-like symptoms, 259 were positive for DENV and 26 for MAYV. Of these, 17 were coinfected with DENV-2, suggesting co-transmission of the viruses. The most common complaints at the time of inclusion were myalgia, headache, fever, arthralgia, retro-orbital pain, and skin rash. No specific symptoms were associated with MAYV when either detected alone or co-detected with DENV, compared to that when DENV was detected alone. Most MAYV-infected subjects were women with no recent travel history to rural/sylvatic areas. Phylogenetic reconstruction indicated that the MAYV identified in this study is closely related with a lineage observed in Peru, belonging to genotype D. Our results corroborate the growing circulation of MAYV in urban environments in Brazil and reinforce the need to implement laboratory diagnosis in the Unified Health System, considering that the clinical manifestations of Mayaro fever are similar to those of other arboviruses, particularly dengue. Furthermore, most cases occurred in association with DENV-2. Further phylogenetic studies are needed to evaluate MAYV, which has not been widely examined.
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- 2021
46. A large food-borne outbreak of campylobacteriosis in kindergartens and primary schools in Pescara, Italy, May–June 2018
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Elisabetta Di Giannatale, Marco Di Domenico, Simona Sorgentone, Vincenzo Savini, Vicdalia Aniela Acciari, Lisa Di Marcantonio, Fabrizio Lodi, Salvatore Antoci, Luca Busani, Xanthi Andrianou, Massimo D'Amario, Silvia Scattolini, Giorgio Robuffo, Francesco Pomilio, Daniela Morelli, Guido Di Donato, Anna Janowicz, Diana Neri, Giuliano Lombardi, Giovanni Rezza, Caterina Graziani, Maurizio Ferri, Nicola D'Alterio, Gabriella Centorotola, Stefania Bellino, Antonio Caponetti, Francesca Cito, Paolo Calistri, Cristina Marfoglia, Valeria Alfonsi, Fabrizio De Massis, Giuliano Garofolo, Anna Pelatti, Giacomo Migliorati, Paolo Fazii, Violeta Di Marzio, Gabriella Di Serafino, Cesare Cammà, Francesca Marotta, and Patrizio Pezzotti
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Adult ,Male ,Microbiology (medical) ,medicine.medical_specialty ,Attack rate ,Campylobacteriosis ,Disease cluster ,Microbiology ,Disease Outbreaks ,Odds ,Campylobacter jejuni ,Foodborne Diseases ,Cheese ,Surveys and Questionnaires ,Environmental health ,Campylobacter Infections ,Epidemiology ,medicine ,Humans ,Child ,Schools ,Outbreak ,General Medicine ,Odds ratio ,medicine.disease ,Food sampling ,Geography ,Italy ,Case-Control Studies ,Child, Preschool ,Food Microbiology ,Pasteurization ,Female - Abstract
Introduction. In May–June 2018, an outbreak of campylobacteriosis involved students and school staff from kindergartens and primary schools in Pescara, southern Italy. Aim. We present details of the epidemiological and microbiological investigation, and the findings of the analytical study, as well as the implemented control measures. Methodology. To identify possible risk factors associated with the observed outbreak, a case control study was conducted using a questionnaire to collect information on the date of symptoms onset, type and duration of symptoms, type of healthcare contact, school attendance, and food items consumed at school lunches during the presumed days of exposure. Attack rates were calculated for each date and school. Logistic regression models were used to estimate the odds ratios of being a case and the odds of illness by food items consumed, respectively. Moreover, we carried out a comparative genomic analysis using whole genome multilocus sequence typing (wgMLST) of Campylobacter jejuni strains isolated during the outbreak investigation to identify the source of the outbreak. Results. Overall, 222 probable cases from 21 schools were identified, and C. jejuni was successfully isolated from 60 patients. The meals in the schools involved were provided by two cooking centres managed by a joint venture between two food companies. Environmental and food sampling, epidemiological and microbiological analyses, as well as a case control study with 176 cases and 62 controls from the same schools were performed to identify the source of the outbreak. The highest attack rate was recorded among those having lunch at school on 29 May (7.8 %), and the most likely exposure was ‘caciotta’ cheese (odds ratio 2.40, 95 % confidence interval 1.10–5.26, P=0.028). C. jejuni was isolated from the cheese, and wgMLST showed that the human and cheese isolates belonged to the same genomic cluster, confirming that the cheese was the vehicle of the infection. Conclusion. It is plausible that a failure of the pasteurization process contributed to the contamination of the cheese batches. Timely suspension of the catering service and summer closure of the schools prevented further spread.
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- 2021
47. [Temporal variations in excess mortality during phase 1 and phase 2 of the COVID-19 epidemic in Italy]
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Paola, Michelozzi, Francesca, de' Donato, Manuela, De Sario, Matteo, Scortichini, Massimo, Stafoggia, Fiammetta, Noccioli, Xanthi, Andrianou, Stefano, Boros, Martina, Del Manso, Massimo, Fabiani, Alberto Mateo, Urdiales, Patrizio, Pezzotti, Pasqualino, Rossi, Giovanni, Rezza, Giuseppe, Costa, and Marina, Davoli
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Adult ,Aged, 80 and over ,Male ,Time Factors ,Adolescent ,Urban Population ,SARS-CoV-2 ,COVID-19 ,Middle Aged ,Young Adult ,Italy ,Cause of Death ,Population Surveillance ,Quarantine ,Humans ,Female ,Mortality ,Aged - Abstract
to assess the temporal variation in excess total mortality and the portion of excess explained by COVID-19 deaths by geographical area, gender, and age during the COVID-19 epidemic.descriptive analysis of temporal variations of total excess deaths and COVID-19 deaths in the phase 1 and phase 2 of the epidemic in Italy.12 Northern cities and 20 Central-Southern cities from December 2019 to June 2020: daily mortality from the National Surveillance System of Daily Mortality (SiSMG) and COVID-19 deaths from the integrated COVID-19 surveillance system.total mortality excess and COVID-19 deaths, defined as deaths in microbiologically confirmed cases of SARS-CoV-2, by gender and age groups.the largest excess mortality was observed in the North and during the first phase of the epidemic. The portion of excess mortality explained by COVID-19 decreases with age, decreasing to 51% among the very old (=85 years). In phase 2 (until June 2020), the impact was more contained and totally attributable to COVID-19 deaths and this suggests an effectiveness of social distancing measures.mortality surveillance is a sensible information basis for the monitoring of health impact of the different phases of the epidemic and supporting decision making at the local and national level on containment measures to put in place in coming months.
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- 2021
48. The effect of COVID-19 vaccination in Italy and perspectives for living with the virus
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Marco Ajelli, Valentina Marziano, Patrizio Pezzotti, Paola Stefanelli, Andrea Siddu, Mattia Manica, Piero Poletti, Antonino Bella, Silvio Brusaferro, Filippo Trentini, Flavia Riccardo, Stefano Merler, Alessia Mammone, Giorgio Guzzetta, and Giovanni Rezza
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Counterfactual thinking ,Vaccination Coverage ,COVID-19 Vaccines ,Coronavirus disease 2019 (COVID-19) ,Adolescent ,Science ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Population ,General Physics and Astronomy ,General Biochemistry, Genetics and Molecular Biology ,Article ,Herd immunity ,03 medical and health sciences ,0302 clinical medicine ,ADOLESCENT, COVID-19, CHILD, CHILD, PRESCHOOL, HUMANS, ITALY, MODELS, THEORETICAL, PANDEMICS, SARS-COV-2, VACCINATION COVERAGE, COVID-19 VACCINES, VACCINATION ,Theoretical ,Models ,Computational models ,Medicine ,Humans ,030212 general & internal medicine ,education ,Child ,Preschool ,Pandemics ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,Multidisciplinary ,business.industry ,SARS-CoV-2 ,Vaccination ,COVID-19 ,General Chemistry ,Models, Theoretical ,Health policy ,3. Good health ,Vaccination Campaigns ,Italy ,Child, Preschool ,Vaccination coverage ,Infectious diseases ,business ,Demography - Abstract
COVID-19 vaccination is allowing a progressive release of restrictions worldwide. Using a mathematical model, we assess the impact of vaccination in Italy since December 27, 2020 and evaluate prospects for societal reopening after emergence of the Delta variant. We estimate that by June 30, 2021, COVID-19 vaccination allowed the resumption of about half of pre-pandemic social contacts. In absence of vaccination, the same number of cases is obtained by resuming only about one third of pre-pandemic contacts, with about 12,100 (95% CI: 6,600-21,000) extra deaths (+27%; 95% CI: 15–47%). Vaccination offset the effect of the Delta variant in summer 2021. The future epidemic trend is surrounded by substantial uncertainty. Should a pediatric vaccine (for ages 5 and older) be licensed and a coverage >90% be achieved in all age classes, a return to pre-pandemic society could be envisioned. Increasing vaccination coverage will allow further reopening even in absence of a pediatric vaccine., Vaccination campaigns against COVID-19 are allowing the progressive release of physical distancing restrictions in many countries. Here, the authors assess the impact of the vaccination program in Italy and evaluate possible prospects for reopening the society while at the same time keeping COVID-19 under control.
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- 2021
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49. Epidemiological characteristics of COVID-19 cases and estimates of the reproductive numbers 1 month into the epidemic, Italy, 28 January to 31 March 2020
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Alessandra Ciervo, Andrea Piccioli, Fortunato D'Ancona, Valentina Marziano, Marco Ajelli, Paola Stefanelli, Antonietta Filia, Piero Poletti, Stefano Boros, Silvio Brusaferro, Maria Cristina Rota, Andrea Siddu, Stefano Merler, Ornella Punzo, Giovanni Rezza, Filippo Trentini, Corrado Di Benedetto, Patrizio Pezzotti, Xanthi Andrianou, Antonino Bella, Massimo Fabiani, Martina Del Manso, Giorgio Guzzetta, Flavia Riccardo, Maria R. Castrucci, Marco Tallon, Stefania Bellino, and Alberto Mateo Urdiales
- Subjects
0301 basic medicine ,Adult ,Male ,medicine.medical_specialty ,COVID-19, SARS-COV-2, DESCRIPTIVE EPIDEMIOLOGY, INFECTIOUS DISEASE MODELLING, ADULT, AGED, AGED, 80 AND OVER, COVID-19, FEMALE, HEALTH PERSONNEL, HUMANS, ITALY, MALE, MIDDLE AGED, MORTALITY, SARS-COV-2, BASIC REPRODUCTION NUMBER ,Coronavirus disease 2019 (COVID-19) ,Epidemiology ,Health Personnel ,Basic Reproduction Number ,80 AND OVER ,Disease ,Medical and Health Sciences ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Infectious disease modelling ,law ,Virology ,Case fatality rate ,Health Sciences ,medicine ,DESCRIPTIVE EPIDEMIOLOGY ,Humans ,030212 general & internal medicine ,Mortality ,Aged ,Aged, 80 and over ,business.industry ,SARS-CoV-2 ,Incidence (epidemiology) ,Research ,Public Health, Environmental and Occupational Health ,Outbreak ,COVID-19 ,Middle Aged ,Confidence interval ,Descriptive epidemiology ,030104 developmental biology ,Transmission (mechanics) ,Italy ,descriptive epidemiology, infectious disease modelling ,INFECTIOUS DISEASE MODELLING ,Female ,business ,Demography - Abstract
Background On 20 February 2020, a locally acquired coronavirus disease (COVID-19) case was detected in Lombardy, Italy. This was the first signal of ongoing transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in the country. The number of cases in Italy increased rapidly and the country became the first in Europe to experience a SARS-CoV-2 outbreak. Aim Our aim was to describe the epidemiology and transmission dynamics of the first COVID-19 cases in Italy amid ongoing control measures. Methods We analysed all RT-PCR-confirmed COVID-19 cases reported to the national integrated surveillance system until 31 March 2020. We provide a descriptive epidemiological summary and estimate the basic and net reproductive numbers by region. Results Of the 98,716 cases of COVID-19 analysed, 9,512 were healthcare workers. Of the 10,943 reported COVID-19-associated deaths (crude case fatality ratio: 11.1%) 49.5% occurred in cases older than 80 years. Male sex and age were independent risk factors for COVID-19 death. Estimates of R0 varied between 2.50 (95% confidence interval (CI): 2.18–2.83) in Tuscany and 3.00 (95% CI: 2.68–3.33) in Lazio. The net reproduction number Rt in northern regions started decreasing immediately after the first detection. Conclusion The COVID-19 outbreak in Italy showed a clustering onset similar to the one in Wuhan, China. R0 at 2.96 in Lombardy combined with delayed detection explains the high case load and rapid geographical spread. Overall, Rt in Italian regions showed early signs of decrease, with large diversity in incidence, supporting the importance of combined non-pharmacological control measures.
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- 2020
50. Longevity of seropositivity and neutralizing titers among SARS-CoV-2 infected individuals after 4 months from baseline: a population-based study in the province of Trento
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Arianna Neri, Iolanda Santino, Stefano Fiore, Paola Stefanelli, Serena Pancheri, Eleonora Benedetti, Antonino Bella, Concetta Fabiani, Anna Carannante, Paola Vacca, Silvio Brusaferro, Pier Paolo Benetollo, Antonio Ferro, Maurizio Simmaco, Pasqualina Leone, Giovanni Rezza, Giancarlo Bizzarri, Giorgio Fedele, Maria Grazia Zuccali, Ilaria Schiavoni, and Rosa Magnoni
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biology ,business.industry ,Concordance ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Virology ,Neutralization ,Titer ,biology.protein ,Vero cell ,Medicine ,Seroprevalence ,Antibody ,business ,Cytopathic effect - Abstract
SummaryBackgroundThere are conflicting results about the duration of antibodies induced by SARS-CoV-2, but several studies show a rapid decay in a few months after infection. To evaluate antibody decline, we re-evaluated the presence of anti-SARS-CoV-2 antibodies among individuals found seropositive in a first population survey conducted 4 months before.MethodsAll individuals above ten years of age resident in 5 municipalities of the Autonomous Province of Trento, northern Italy, who resulted IgG positive for anti-SARS-CoV-2 nucleocapsid (NC) antibodies in a serosurvey conducted on May 2020 were retested after 4 months. Anti-SARS-CoV-2 antibodies were detected using the Abbott SARS-CoV-2 IgG assay (Abbott Diagnostics, USA) detecting anti-NC antibodies. Samples that gave a negative result were re-tested using the same test plus Liaison SARS-CoV-2 IgG assay (DiaSorin, Italy) to assess anti-spike (S) S1/S2 IgG antibodies. Seroprevalence was calculated as the proportion of positive people on the total number of tested. A neutralizing assay was performed on a subgroup of formerly positives sera using fifty-percent tissue culture infective dose (TCID50) as endpoint dilution to produce a cytopathic effect in 50% of inoculated Vero E6 cells culture. In all the analyses a p value < 0.05 were considered statistically significant. Statistical analysis was performed by STATA version 16.1 (STATA Corp., College Station, Texas, USA).FindingsOverall, 1159 out of 1402 initially anti-NC seropositive participants were enrolled in the study. Of them, 480 (41.1%) became seronegative for anti-NC IgG antibodies. When 479 negative sera were tested for anti-S IgG, 373 samples (77.9%) resulted positives. A functional neutralization assay was performed on 106 sera showing high concordance with anti-S antibodies positivity.InterpretationA decline of anti-NC IgG values was recorded 4 months after the first evaluation. Worth of note, a high proportion of anti-NC seronegative individuals were positive for anti-spike IgG antibodies, which appear to persist longer and to better correlate with neutralization activity.
- Published
- 2020
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