1. A chromosome-level reference genome for the common octopus,Octopus vulgaris(Cuvier, 1797)
- Author
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Dalila Destanović, Darrin T. Schultz, Ruth Styfhals, Fernando Cruz, Jèssica Gómez-Garrido, Marta Gut, Ivo Gut, Graziano Fiorito, Oleg Simakov, Tyler S. Alioto, Giovanna Ponte, and Eve Seuntjens
- Abstract
Cephalopods are emerging animal models and iconic species to study the link between genomic innovations and physiological and behavioral complexities. Coleoid cephalopods possess the largest nervous system among invertebrates, both for cell counts and body-to-brain ratio.Octopus vulgarishas been at the center of a long-standing tradition of research into diverse aspects of cephalopod biology, including behavioral and neural plasticity, learning and memory recall, regeneration, and sophisticated cognition. However, no chromosome-scale genome assembly is available forO. vulgaristo aid in functional studies. To fill this gap, we sequenced and assembled a chromosome-scale genome of the common octopus,O. vulgaris. The final assembly spans 2.8 billion basepairs, 99.34% of which are in 30 chromosome-scale scaffolds. Hi-C heatmaps support a karyotype of 1n=30 chromosomes. Comparisons with other octopus species’ genomes show a conserved octopus karyotype, and a pattern of local genome rearrangements between species. This new chromosome-scale genome ofO. vulgariswill further facilitate molecular research in all aspects of cephalopod biology, including various forms of plasticity and the neural machinery underlying sophisticated cognition, as well as an understanding of cephalopod evolution.
- Published
- 2023
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