98 results on '"Daqing Sun"'
Search Results
2. Heterotopic squamous epithelial inclusion cyst in a cervical lymph node in a child: a case report and literature review
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Pengling Huang, Chao Ma, Guanghua Pei, and Daqing Sun
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Pediatrics, Perinatology and Child Health - Published
- 2022
3. A Fluorinated Supramolecular Self‐Assembled Peptide as Nanovaccine Adjuvant for Enhanced Cancer Vaccine Therapy (Small Methods 5/2023)
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Shaorui Jia, Shenglu Ji, Jia Zhao, Yonghui Lv, Jiayang Wang, Daqing Sun, and Dan Ding
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General Materials Science ,General Chemistry - Published
- 2023
4. Integrated metabolite profiling and transcriptome analysis unraveling mechanism of RC catabolism in Paenarthrobacter ilicis CR5301
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Hongfei Li, Daqing Sun, Longkui Cao, and Baohui Wang
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Microbiology (medical) ,Microbiology - Abstract
Steviol glycosides are ideal sweeteners that are widely used in food, medicine, and cosmetics. Rebaudioside C (RC) is considered to be the third most abundant steviol glycoside, which has a bitter aftertaste that limits its application. Hydrolysis of RC to generate other bioactive steviol glycosides is an effective way to promote its additional utilization. In our previous study, a bacterium Paenarthrobacter ilicis CR5301 was isolated and identified for hydrolyzing RC with high efficiency. Herein, the expression profiles of P. ilicis CR5301 in the deletion and presence of RC were investigated by RNA-seq. The RC metabolites were identified by high-performance liquid chromatography and ultra-performance liquid chromatography-triple-time of flight mass spectrometry. Novel results were discovered in four aspects of research. First, the identification of metabolites revealed that four metabolites, namely, dulcoside A, dulcoside B, dulcoside A1, and steviol, were produced during RC metabolism. Second, RNA-seq analyses unraveled that 105 genes of P. ilicis CR5301 were significantly differentially expressed, and 7 pathways were significantly enriched. Third, independent RT-qPCR verified the accuracy and reliability of the RNA-seq results. Finally, a complete catabolic model of RC in P. ilicis CR5301 was proposed, and key genes were indicated in the RC catabolic metabolism by combining them with literature and sequence alignments. This study comprehensively unraveled the genes and pathways of RC catabolism in P. ilicis CR5301 at the transcriptional and metabolic levels. It provided new insights and evidence for understanding the mechanism of RC catabolism in bacteria. Key candidate genes may potentially contribute to the RC hydrolysis and preparation of other functional steviol glycosides in the future.
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- 2023
5. Effect of megarectum on postoperative defecation of female patients with congenital rectovestibular fistula or rectoperineal fistula
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Chunxiang Liu, Song Wang, Jinyu Dai, Jian Li, Xiaoxia Wu, Yong Liu, Zhiwei Yao, Lushun Ma, Xiaobing Sun, and Daqing Sun
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Pediatrics, Perinatology and Child Health - Abstract
BackgroundTo assess the effect of megarectum on postoperative defecation of female patients with congenital rectovestibular fistula or rectoperineal fistula.MethodsFrom March 2013 to February 2021, 74 female patients with congenital rectovestibular fistula or rectoperineal fistula were treated. The age of patients ranged from 3 months to 1 year. Barium enema and spinal cord MRI were performed in all children. 4 patients were removed from the study because of spinal cord and sacral agenesis. Finally, 70 patients underwent one-stage anterior sagittal anorectoplasty (ASARP). Anal endoscopy and anorectal pressure measurement were performed 1 year after surgery. All patients were divided into two groups depending on the presence of megarectum (+) and (−) and observed for constipation and anal sphincter function.Results16 patients (4 months to 1 year) were complicated with megarectum, and 5 patients (3 months to 9 months) were without megarectum. The incision infection was seen in 3 patients. All patients were followed up for 1 year to 5 years. Fecal soiling was seen in 2 patients and constipation in 14 patients. Among 16 patients with megarectum, soiling was seen in 1 patient and the constipation in 12 patients. Among 54 patients without megarectum, soiling was seen in 1 patient and constipation in 2 patients. There was a significant difference in the incidence of postoperative constipation between the two groups (megarectum (+) 75% vs. megarectum (−) 3.7% (P P P = 0.49) and length of anal high pressure area (P = 0.76). 7 patients with constipation and megarectum acquired normal anal function after the dilated rectum was resected.ConclusionMegarectum increases the possibility of difficult postoperative defecation in the patients with congenital rectovestibular fistula or rectoperineal fistula. However, constipation was not associated with ASARP postoperative effects on sphincter function. Resection of megarectum is helpful to the improvement of constipation.
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- 2023
6. Protective Effect of Nimbolide against High Fat Diet-induced Obesity in Rats via Nrf2/HO-1 Pathway
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Lin Zhang, Yujun Li, Daqing Sun, and Feng Bai
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Limonins ,NF-E2-Related Factor 2 ,General Chemical Engineering ,General Medicine ,General Chemistry ,Diet, High-Fat ,Glutathione ,Antioxidants ,Rats ,Animals ,Cytokines ,Obesity ,RNA, Messenger ,Rats, Wistar - Abstract
Current time obesity is the major challenges globally and the incidence of the obesity has raised dramatically in current years. The obesity enhanced the various metabolic diseases such as diabetes, cardiac, cancer and steatohepatitis. Natural drug having the long history to ameliorate the obesity and its related metabolic disorder. In this experimental study, we scrutinized the anti-obesity effect of nimbolide against high fat diet (HFD) induced obesity in rats. Wistar rats were divided into 5 groups and each group contains 10 rats. The body weight, tissue weight was estimated at regular time. Carbohydrate, lipid, hepatic, inflammatory cytokines, antioxidant and inflammatory parameters were estimated. The mRNA expression was also estimated. Nimbolide treated groups significantly (p0.001) suppressed the body weight at dose dependent manner. Nimbolide significantly (p0.001) reduced the hepatic parameters and altered the antioxidant parameters such as thiobarbituric acid reactive substances (TBARS), glutathione (GSH), catalase (CAT), glutathione peroxidase (GPx), superoxide mutase (SOD), glutathione S transferase (GST); decreased the level of inflammatory cytokines (IL-1β, IL-6, TNF-α). Nimbolide suppressed the mRNA expression of glucose-6-phosphatase HO-1 and nuclear factor erythroid-2 related factor-2 (Nrf2). Collectively, we can say that nimbolide having the capability to suppressed the HFD induced obesity via Nrf2/HO-1 pathway.
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- 2022
7. RhoGDIα regulates spermatogenesis through Rac1/cofilin/F-actin signaling
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Haixia Zhu, Zongzhuang Wen, Aizhen Zhang, Dongyue Liu, Hongxiang Wang, Yin Cheng, Xing Yang, Yu Xiao, Jianyuan Li, Daqing Sun, Bin Wu, and Jiangang Gao
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Medicine (miscellaneous) ,General Agricultural and Biological Sciences ,General Biochemistry, Genetics and Molecular Biology - Abstract
Spermatogenesis is an extremely complex process, and any obstruction can cause male infertility. RhoGDIα has been identified as a risk of male sterility. In this study, we generate RhoGDIα knockout mice, and find that the males have severely low fertility. The testes from RhoGDIα−/− mice are smaller than that in WT mice. The numbers of spermatogonia and spermatocytes are decreased in RhoGDIα−/− testis. Spermatogenesis is compromised, and spermatocyte meiosis is arrested at zygotene stage in RhoGDIα−/− mice. Acrosome dysplasia is also observed in sperms of the mutant mice. At the molecular level, RhoGDIα deficiency activate the LIMK/cofilin signaling pathway, inhibiting F-actin depolymerization, impairing testis and inducing low fertility in mouse. In addition, the treatment of RhoGDIα−/− mice with Rac1 inhibitor NSC23766 alleviate testis injury and improve sperm quality by inhibiting the LIMK/cofilin/F-actin pathway during spermatogenesis. Together, these findings reveal a previously unrecognized RhoGDIα/Rac1/F-actin-dependent mechanism involved in spermatogenesis and male fertility.
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- 2023
8. A Fluorinated Supramolecular Self‐Assembled Peptide as Nanovaccine Adjuvant for Enhanced Cancer Vaccine Therapy
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Shaorui Jia, Shenglu Ji, Jia Zhao, Yonghui Lv, Jiayang Wang, Daqing Sun, and Dan Ding
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General Materials Science ,General Chemistry - Published
- 2023
9. Construction and Validation of Nomogram Prognostic Model for Predicting Survival in Hepatoblastoma Patients: A Population-Based Study
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Chunxiang Liu, Song Wang, Yong Liu, Zheng Guo, Rui Li, Yuchao Wang, Wei Sun, Fulong Ji, and Daqing Sun
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Background For patients with hepatoblastoma (HB), current staging system is not accurate in predicting survival outcomes. The aim of this study was to develop two accurate survival prediction models to guide clinical decision making. Methods A retrospective analysis of 424 HB patients was performed from 2004 to 2015 using the Surveillance, Epidemiology and End Results (SEER) database. Univariate and multivariate Cox regression analysis was used to screen for variables. The identified variables were used to build survival prediction model. The performance of the nomogram models was assessed based on the concordance index (C-index), calibration plot, and receiver operating characteristic (ROC) curve. Results The Cox regression analysis identified six variables affecting overall survival (OS) in HB patients, including race, tumor size, lymph node involvement, distant metastases, surgery and chemotherapy. And the Cox regression analysis identified five variables including race, lymph node involvement, distant metastases, surgery and chemotherapy that affect cancer-specific survival (CCS) in HB patients. In the training cohort, the C-index of the nomogram in predicting the OS was 0.791[95% confidence intervals (95% CI): 0.717–0.865], CSS was 0.805(95% CI: 0.728–0.882). In the validation cohort, the C-index of the nomogram in predicting the OS was 0.712 (95% CI: 0.511–0.913), the CSS was 0.751 (95% CI: 0.566–0.936). In the training cohort, the area under the receiver operator characteristics curve (AUC) values of the nomogram in prediction of the 1, 3, and 5-year OS were 0.842 (95% CI: 0.739–0.944), 0.759 (95% CI: 0.670–0.849), and 0.770 (95% CI: 0.686–0.852), respectively. In the validation cohort, the AUC values for prediction of the 1, 3, and 5-year OS were 0.920 (95% CI: 0.806–1.034), 0.863 (95% CI: 0.750–0.976), and 0.844 (95% CI: 0.721–0.967), respectively. Conclusion Two nomogram models were developed and validated in this study which provided accurate prediction of the OS and CSS in HB patients. The constructed models can be used for predicting survival outcomes and guide treatment for HB patients.
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- 2023
10. Associations of Vitamin B12 intake With kidney stone prevalence
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chunxiang Liu, Bo Wang, Haoyu Wang, Zheng Guo, Song Wang, Yuchao Wang, Wei Sun, Xiaoqiang Liu, and Daqing Sun
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Background: The associations of vitamin B12 intake with kidney stones prevalence remain unclear. The purpose of this research was to investigate whether or not there is a connection between kidney stones and vitamin B12 use. Methods: To investigate the connection between the amount of vitamin B12 consumed and the incidence of kidney stones, we carried out a cross-sectional study using data from the National Health and Nutrition Examination Survey from 2015-2016 and 2017-2018, which included a total of 4599 participants. The survey was carried out in the United States. Results: A logistic regression model adjusted for covariates in all individuals revealed that the second quartile (OR: 0.879, p = 0.489), third quartile (OR: 0.708, p = 0.069), and fourth quartile (OR: 0.641, p = 0.018) of Vitamin B12 substantially reduce kidney stone risks. Vitamin B12 consumption levels had a U-shaped connection with kidney stone risk in the 20-34 age group, with the ORs of kidney stone risk in the second, third, and fourth levels of Vitamin B12 being 0.841 (P = 0.711), 0.345 (P = 0.025), and 1.767 (P = 0.147), respectively. However, these results were not found in the other age group; for people aged 49–63, when the concentration of vitamin B12 intake was 5.84~62.71mcg/d, the OR value of kidney stones was 0.279 (0.126-0.615), and their was no significant difference in OR values between 34-49 years old and 63-80 years old. In the gender subgroup analysis, when the vitamin B12 intake was 5.84~62.71mcg/d in men and 3.5~5.84mcg/d in women, the use of vitamin B12 has an inverse relationship with the odds ratio of developing kidney stones. Conclusions: The quartile of vitamin B12 consumption has been shown to have an inverse relationship with the chance of developing kidney stones. Gender subgroup analysis also found a negative correlation. The best vitamin B12 intake associated with the lowest OR of kidney stones was 5.84~62.71mcg/d in males and 3.5~5.84mcg/d in females. The OR of kidney stones in people aged 49 to 63 years old was the lowest, which was 5.84~62.71mcg/d.
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- 2022
11. Asymptomatic uterine metastasis of breast cancer: Case report and literature review
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Dechen Kong, Xiaotong Dong, Peiyan Qin, Daqing Sun, Zhengtao Zhang, Yan Zhang, Furong Hao, and Mingchen Wang
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Carcinoma, Lobular ,Leiomyoma ,Positron Emission Tomography Computed Tomography ,Uterine Neoplasms ,Uterus ,Humans ,Breast Neoplasms ,Female ,General Medicine ,Middle Aged - Abstract
Uterine metastasis from breast cancer is extremely rare. Asymptomatic patients with cervical metastases from breast cancer are rarer and more likely to be missed. We present an asymptomatic patient with breast cancer metastasized to the uterus and share opinions on diagnosing and treating for this kind of cases.We present the case of a 64-year-old woman who was diagnosed with both breast cancer and uterine fibroids after examination. She had no symptoms of gynecological disease during breast cancer treatment. A positron emission tomography/computed tomography (PET/CT) scan was performed during reexamination, revealing multiple metastases of the bone throughout the body and an abnormal hypermetabolic mass in the uterus. It was later confirmed as uterine metastasis by pathology.A diagnosis of metastatic breast invasive lobular carcinoma was established after a uterine curettage.Treatment of the uterine metastasis included systemic chemotherapy, total abdominal hysterectomy and bilateral salpingo-oophorectomy (TAH and BSO), postoperative radiotherapy, and postoperative chemotherapy. The patient eventually refused further treatment for personal reasons and died at home.Breast cancer metastases to the uterus are very rare and further research is needed for their diagnosis and treatment. During reexamination of breast cancer patients, clinicians must be alert to metastasis to gynecologic organs. This is particularly important in hormone receptor-positive patients with asymptomatic distant metastasis.
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- 2022
12. Computational study on new natural compound inhibitors of Traf2 and Nck-interacting kinase (TNIK)
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Lushun Ma, Rui Li, Zhiwei Yao, Bo Wang, Yong Liu, Chunxiang Liu, Heng Wang, Shuxian Chen, and Daqing Sun
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Molecular Docking Simulation ,Aging ,Cell Biology ,Protein Serine-Threonine Kinases ,Wnt Signaling Pathway ,beta Catenin ,Protein Binding - Abstract
Traf2 and Nck-interacting kinase (TNIK) is the downstream molecule of Wnt/β-catenin signal pathway. As the activation kinase of β-catenin/T-cell factor 4 transcription complex, it can fully activate Wnt signalling and promote the growth and invasion of tumor cells. We conducted computer-assisted virtual screening and a series of analyses to find potential inhibitors of TNIK. First, LibDock was used for molecular docking of natural small molecules. Then, ADME (Adsorption, Distribution, Metabolism and Excretion) analysis and toxicity prediction were performed on the top 80 small molecules which have higher scores. Additionally, in order to further determine the affinity and binding mechanism of TNIK-ligands, we analyzed the pharmacophores and used CDOCKER for more accurate molecular docking. Last but not least, molecular, dynamics simulation was used to evaluate the stability of receptor-ligand complexes in natural environment. The results showed that natural small molecules (ZINC000040976869 and ZINC000008214460) had high affinity and low interaction energy with TNIK. They were predicted to have excellent pharmacological properties, such as high plasma protein binding capacity and water solubility, no hepatotoxicity, no blood-brain barrier permeability and tolerant with cytochrome P450 2D6 (CYP2D6). In addition, they have less rodent carcinogenicity, AMES mutagenicity, and developmental toxicity potential. Molecular dynamics simulations showed that the two compounds could achieve the stability of potential energy and Root-Mean-Square Deviation (RMSD) at different time nodes. This study proves that ZINC000040976869 and ZINC000008214460 are ideal lead compounds with inhibition targeting to TNIK. These compounds provide valuable ideas and information for the development of new colorectal cancer targeting drugs.
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- 2022
13. Inflammatory Indicators and Hematological Indices in Contrast-Induced Nephropathy Among Patients Receiving Coronary Intervention: A Systematic Review and Meta-Analysis
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Jinmiao Wang, Enyuan Zhang, Daqing Sun, Xiaoyan Wu, Chao Ma, and Guojing Zhang
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Blood Platelets ,Erythrocyte Indices ,Male ,medicine.medical_specialty ,Neutrophils ,Contrast-induced nephropathy ,Contrast Media ,Coronary Disease ,030204 cardiovascular system & hematology ,Hematocrit ,Coronary Angiography ,Risk Assessment ,Gastroenterology ,Nephropathy ,03 medical and health sciences ,Percutaneous Coronary Intervention ,0302 clinical medicine ,Risk Factors ,Internal medicine ,medicine ,Humans ,Lymphocyte Count ,Lymphocytes ,030212 general & internal medicine ,Neutrophil to lymphocyte ratio ,Aged ,medicine.diagnostic_test ,biology ,Platelet Count ,business.industry ,Incidence ,C-reactive protein ,Red blood cell distribution width ,Odds ratio ,Acute Kidney Injury ,Middle Aged ,medicine.disease ,C-Reactive Protein ,Treatment Outcome ,Meta-analysis ,biology.protein ,Female ,Inflammation Mediators ,Cardiology and Cardiovascular Medicine ,business ,Biomarkers - Abstract
Strong inflammatory indicators such as C-reactive protein (CRP), high-sensitivity CRP (hsCRP), and hematological indices, including platelet to lymphocyte ratio (PLR), neutrophil to lymphocyte ratio (NLR), hematocrit (HCT), and red blood cell distribution width (RDW), may be related with contrast-induced nephropathy (CIN). Our meta-analysis aimed at exploring the relationship between these indicators and CIN incidence among patients undergoing coronary intervention. Clinical studies were retrieved from the electronic databases of PubMed, EMBASE, Google Scholar, Clinical Trials, and Science Direct from their inception to June 3, 2020. Meta-analysis was performed on pooled eligible studies. Finally, 26 studies involving 29 454 patients were included. Pooled analysis revealed that patients with higher CRP (odds ratio [OR] = 1.06, 95% CI: 1.01-1.12, P = .02), hsCRP (OR = 1.03, 95% CI: 1.01-1.06, P = .004), NLR (OR = 1.11, 95% CI: 1.01-1.20, P = .02), RDW (OR = 1.35, 95% CI: 1.19-1.53, P < .001), and lower HCT (OR = 0.94, 95% CI: 0.92-0.97, P = .003) all exhibited significantly higher CIN rates, but there was no significant association between PLR and CIN risk (OR = 1.12, 95% CI: 0.99-1.26, P = .07). Pre-angiography CRP/hsCRP and some hematological indices are associated with CIN.
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- 2021
14. Microbiota diversity, composition and drivers in waxy proso millet sourdoughs of Niandoubao, a traditional fermented cereal food in northeast China
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Daqing Sun, Hongfei Li, He Qi, and Dongjie Zhang
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Food Science - Published
- 2023
15. Based on Network Pharmacology and Gut Microbiota Analysis to Investigate the Mechanism of the Laxative Effect of Pterostilbene on Loperamide-Induced Slow Transit Constipation in Mice
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Zhiwei, Yao, Siqi, Fu, Bingbing, Ren, Lushun, Ma, and Daqing, Sun
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Pharmacology ,Pharmacology (medical) - Abstract
Background: Pterostilbene (PTE) is a natural polyphenol compound that has been proven to improve intestinal inflammation, but its laxative effect on slow transit constipation (STC) has never been studied. This study aims to investigate the laxative effect of PTE on loperamide (LOP)-induced STC mice and its influence on intestinal microbes through a combination of network pharmacological analysis and experimental verification.Material and Methods: PTE was used to treat LOP-exposed mice, and the laxative effect of PTE was evaluated by the total intestinal transit time and stool parameters. The apoptosis of Cajal interstitial cells (ICCs) was detected by immunofluorescence. The mechanism of PTE’s laxative effect was predicted by network pharmacology analysis. We used western blot technology to verify the predicted hub genes and pathways. Malondialdehyde (MDA) and GSH-Px were tested to reflect oxidative stress levels and the changes of gut microbiota were detected by 16S rDNA high-throughput sequencing.Results: PTE treatment could significantly improve the intestinal motility disorder caused by LOP. Apoptosis of ICCs increased in the STC group, but decreased significantly in the PTE intervention group. Through network pharmacological analysis, PTE might reduce the apoptosis of ICCs by enhancing PI3K/AKT and Nrf2/HO-1 signaling, and improve constipation caused by LOP. In colon tissues, PTE improved the Nrf2/HO-1 pathway and upregulated the phosphorylation of AKT. The level of MDA increased and GSH-Px decreased in the STC group, while the level of oxidative stress was significantly reduced in the PTE treatment groups. PTE also promoted the secretion of intestinal hormone and restored the microbial diversity caused by LOP.Conclusion: Pterostilbene ameliorated the intestinal motility disorder induced by LOP, this effect might be achieved by inhibiting oxidative stress-induced apoptosis of ICCs through the PI3K/AKT/Nrf2 signaling pathway.
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- 2022
16. Single-Cell Transcriptome Analysis Reveals Mesenchymal Stem Cells in Cavernous Hemangioma
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Yong Liu, Siqi Fu, Heng Wang, Bingbing Ren, Chunxiang Liu, Shan Gao, Fulong Ji, Daqing Sun, Dong Mi, and Jinsong Shi
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History ,Cell type ,Polymers and Plastics ,Mesenchymal stem cell ,Cell Biology ,Biology ,medicine.disease ,CXCR4 ,Industrial and Manufacturing Engineering ,CCL5 ,Hemangioma ,Endothelial stem cell ,Immune system ,medicine ,Cancer research ,Business and International Management ,Scavenger receptor ,Stem cell ,CD8 ,Developmental Biology - Abstract
A cavernous hemangioma, well-known as vascular malformation, is present at birth, grows proportionately with the child, and does not undergo regression. Although a cavernous hemangioma has well-defined histopathological characteristics, its origin and formation remain unknown. In the present study, we characterized the cellular heterogeneity of cavernous hemangioma using single-cell RNA sequencing (scRNA-seq). The main contribution of this study is the discovery of mesenchymal stem cells (MSCs) that cause tumour formation in cavernous hemangioma and we propose that these MSCs may be abnormally differentiated or incompletely differentiated from epiblast stem cells.Other new findings include the responsive ACKR1 positive endothelial cell (ACKR1+EC) and BTNL9 positive endothelial cell (BTNL9+EC) and the BTNL9-caused checkpoint blockade enhanced by the CXCL12-CXCR4 signalling. The activated CD8+T and NK cells may highly express CCL5 for their infiltration in cavernous hemangiomas, independent on the tumor cell-derived CCL5-IFNG-CXCL9 pathway. The highly co-expression of CXCR4 and GZMB suggested that plasmacytoid dendritic cells (pDCs) function for anti-tumour as CD8+T cells in cavernous hemangiomas. The oxidised low-density lipoprotein (oxLDL) in the TME of cavernous hemangiomas may play an important role as a signalling molecular in the immune responses. Notably, we propose that oxLDL induces the oxLDL-OLR1-NLRP3 pathway by over-expression of OLR1 in M1-like macrophages, whereas oxLDL induces the oxLDL-SRs-C1q (SRs are genes encoding scavenger receptors of oxLDL except OLR1) pathway by over-expression of other scavenger receptors in M2-like macrophages.The present study revealed the origin of cavernous hemangiomas and discovered marker genes, cell types and molecular mechanisms associated with the origin, formation, progression, diagnosis or therapy of cavernous hemangiomas. The information from the present study makes important contributions to the understanding of cavernous hemangioma formation and progression and facilitates the development of gold standard for molecular diagnosis and effective drugs for treatment.
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- 2022
17. Dioscin ameliorates slow transit constipation in mice by up-regulation of the BMP2 secreted by muscularis macrophages
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BingBing, Ren, SiQi, Fu, Yong, Liu, JianYu, Kang, Bo, Wang, ZhiWei, Yao, Hao, Wang, and DaQing, Sun
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The loss of enteric neurons has been shown to be a major cause of slow transit constipation (STC). Gut microbiota and muscularis macrophages (MMs) are associated with the enteric nervous system (ENS) development and gastrointestinal (GI) motility. This study aimed to investigate whether Dioscin (DIO) increased GI motility and inhibited neuron loss by modulating gut microbiota profile, improving inflammation in the ENS microenvironment.The STC model was established by loperamide. The alteration of the gut microbiota was analyzed by 16S rDNA sequencing. The longitudinal muscle and myenteric plexus (LMMP) from the colon were prepared for flow cytometry, immunofluorescence, western blot, and qRT-PCR.DIO increased the stool number, stool water content and shortened whole gut transit time, helped to recover the gut microbial diversity and microbiota community structure, and increased the abundance of Muribaculaceae in STC mice. Compared with the STC group, the number of MMs and the level of the iNOS, IL-6, and TNFα genes were significantly decreased following DIO treatment. Moreover, DIO may increase the number of HuC/DOur results provide that DIO increases GI motility and inhibits neuron loss by modulating gut microbiota profile, improving inflammation in the ENS microenvironment and up-regulating the BMP2 secreted by MMs.
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- 2022
18. Conditional deletion of Hspa5 leads to spermatogenesis failure and male infertility in mice
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Zongzhuang, Wen, Haixia, Zhu, Jing, Wang, Bin, Wu, Aizhen, Zhang, Hui, Zhao, Chenyang, Song, Shuangyuan, Liu, Yin, Cheng, Hongxiang, Wang, Jianyuan, Li, Daqing, Sun, Xiaolong, Fu, Jiangang, Gao, and Min, Liu
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General Medicine ,General Pharmacology, Toxicology and Pharmaceutics ,General Biochemistry, Genetics and Molecular Biology - Abstract
Heat shock proteins (HSPs) have important roles in different developmental stages of spermatogenesis. The heat shock 70 kDa protein 5 (HSPA5) is an important component of the unfolded protein response that promotes cell survival under endoplasmic reticulum (ER) stress conditions. In this study, we explored the function of HSPA5 in spermatogenesis, by generating a germ cell-specific deletion mutant of the Hspa5 gene (conditional knockout of the Hspa5 gene, Hspa5-cKO) using CRISPR/Cas9 technology and the Cre/Loxp system. Hspa5 knockout resulted in severe germ cell loss and vacuolar degeneration of seminiferous tubules, leading to complete arrest of spermatogenesis, testicular atrophy, and male infertility in adult mice. Furthermore, defects occurred in the spermatogenic epithelium of Hspa5-cKO mice as early as Cre recombinase expression. Germ cell ablation of Hspa5 impaired spermatogonia proliferation and differentiation from post-natal day 7 (P7) to P10, which led to a dramatic reduction of differentiated spermatogonia, compromised meiosis, and led to impairment of testis development and the disruption of the first wave of spermatogenesis. Consistent with these results, single-cell RNA sequencing (scRNA-seq) analysis showed that germ cells, especially differentiated spermatogonia, were dramatically reduced in Hspa5-cKO testes compared with controls at P10, further confirming that HSPA5 is crucial for germ cell development. These results suggest that HSPA5 is indispensable for normal spermatogenesis and male reproduction in mice.
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- 2023
19. A novel lnc-LAMC2-1:1 SNP promotes colon adenocarcinoma progression by targeting miR-216a-3p/HMGB3
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Fulong Ji, Zhiwei Yao, Chunxiang Liu, Siqi Fu, Bingbing Ren, Yong Liu, Lushun Ma, Jianming Wei, and Daqing Sun
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Multidisciplinary - Abstract
Single nucleotide polymorphisms (SNPs) was associated with altering the secondary structure of long non-coding RNA (lncRNA). Increasing reports showed that
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- 2022
20. A new species and a key to eleven species of the genus Conophyma Zubovsky, 1898 (Orthoptera, Acridoidea, Catantopidae, Conophyminae) from China
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Yu-Sheng Liu, Daqing Sun, Jinyu Zhang, and Zhan Yin
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China ,Insecta ,Arthropoda ,Orthoptera ,Zoology ,Genus ,Animals ,Body Size ,Animalia ,Acridoidea ,Dericorythidae ,Ecology, Evolution, Behavior and Systematics ,Taxonomy ,geography ,Plateau ,geography.geographical_feature_category ,biology ,Animal Structures ,Organ Size ,Conophyminae ,Biodiversity ,biology.organism_classification ,Apex (geometry) ,Key (lock) ,Animal Science and Zoology ,Animal Distribution - Abstract
A new species and a key to eleven species of of the genus Conophyma Zobovsky, 1898 from China is described in this paper. The new species Conophyma lini sp. nov. is similar to C. xiai Zhang et al, 2015, but differs from latter by: vertex longer, apex narrower; minimum width of interspace 1.6 times length in mesosternum; posterior margin of epiproct waved, with angular projection in the middle, furculae small and width of Epiphallus 2.5 times high. Type specimens are deposited in the Northwest Plateau Institute of Biology, Chinese Academy of Sciences, Xining, Qinghai 810001, China.
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- 2021
21. Molecular Mechanism of Biofilm Locator Protein Kinase Dbf2p-related kinase 1 in Regulating Innate Immune Response to Interleukin 17-induced Viral Pneumonia
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Fang Shu, Yun Bai, Feixiao Xue, Shanshan Shi, Haifeng Wang, Lina Bu, and Daqing Sun
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Chemokine ,respiratory syncytial virus ,Pneumonia, Viral ,Bioengineering ,Respiratory Syncytial Virus Infections ,Protein Serine-Threonine Kinases ,Applied Microbiology and Biotechnology ,immune response ,Mice ,Immune system ,inflammatory responses ,medicine ,Animals ,Protein kinase A ,Cell Proliferation ,Inflammation ,Innate immune system ,biology ,Chemistry ,Interleukin-17 ,IL17 ,NDR1 ,General Medicine ,medicine.disease ,RAW264.7 ,Molecular biology ,Immunity, Innate ,Respiratory Syncytial Viruses ,CCL20 ,CXCL2 ,RAW 264.7 Cells ,Viral pneumonia ,Biofilms ,biology.protein ,Interleukin 17 ,Chemokines ,TP248.13-248.65 ,Biotechnology ,Signal Transduction ,Research Article ,Research Paper - Abstract
It focused on the antiviral immune regulation of biofilm-localized protein kinase Dbf2p-related kinase 1 (NDR1) in viral pneumonia. Mouse alveolar monocyte RAW264.7 was used as blank control, and viral pneumonia cell model was prepared by infecting cells with respiratory syncytial virus (RSV). NDR1 overexpression vector and siRNA interference sequences were synthesized, and overexpression/silence NDR1 cell model was fabricated. About 50 ng/mL interleukin 17 (IL-17) was given to stimulate. Enzyme-linked immunosorbent assay (ELISA), quantitative reverse transcription PCR (RT-qRCR), and Western blot were performed to detect cytokines and chemokines, mRNA of inflammatory factors, and signal molecule protein expression. Notably, RSV infection increased RSV-F mRNA in RAW264.7 cells and reduced NDR1 mRNA and protein. Secretion levels of IL-6, interferon β (IFN-β), chemokine (C-X-C motif) ligand 2 (CXCL2), and chemokine (C-C motif) ligand 2 (CCL20) increased in the model group versus blank control (P 0.05). In short, NDR1 regulated innate immune response to viral pneumonia induced by IL-17, which can be used as a new target for the treatment of IL-17-induced inflammatory response and autoimmune diseases.
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- 2021
22. ISG20L2 as a Novel Prognostic Biomarker Facilitates the Progression of Pancreatic Cancer via Glycolysis
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Jianming Wei, Xibo Gao, Bingbing Ren, Daqing Sun, and Tong Liu
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genetic structures ,endocrine system diseases ,business.industry ,Pancreatic cancer ,Cancer research ,Medicine ,Prognostic biomarker ,Glycolysis ,business ,medicine.disease - Abstract
Background: Longstanding type 2 diabetes mellitus (T2DM) is an increased risk of pancreatic cancer (PC) in western populations, and PC is also a cause of T2DM. However, the association of glucose metabolism between T2DM and PC remains unclear. Methods: Differentially expressed genes (DEGs) were identified by bioinformatic analysis from Gene Expression Omnibus (GEO) datasets GSE20966 and GSE16515, respectively. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, Gene Set Enrichment Analysis (GSEA), the Kaplan-Meier (KM) Plotter and Tumor Immune Estimation Resource (TIMER) database were applied. Pancreatic cancer cell lines and primary PDAC samples were used. Cell culture, immunohistochemistry (IHC), siRNA transfection, Western blot, RT-PCR, and migration assay, animal xenograft model studies and statistical analysis were performed in this study. Results: We identified 64 DEGs in GSE20966 of T2DM, and 296 DEGs were identified in GSE16515 of pancreatic cancer, respectively. T2DM-DEGs were mainly enriched in synaptic vesicle cycle, protein export. KEGG pathways in pancreatic cancer included spliceosome, RNA transport. Here, ISG20L2 was identified as only a co-expressed gene between T2DM and PDAC. We found that the expression of ISG20L2 was associated with tumor immune cell infiltration. ISG20L2 was significantly upregulated in PDAC and associated with prognosis of PDAC patients. Moreover, ISG20L2 expression was regulated by GLUT1, HK2, LDHA, PKM1 and PKM2 related with glycolysis in PDAC. ISG20L2 promoted PDAC cell proliferation and migration both in vitro and in vivo. Conclusion: This study showed that ISG20L2 promoted the progression and ISG20L2 may be a potential therapeutic strategy in PDAC.
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- 2021
23. Effect of miR-129-3p on autophagy of interstitial cells of Cajal in slow transit constipation through SCF C-kit signaling pathway
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Heng Wang, Bingbing Ren, Jun Pan, Siqi Fu, Chunxiang Liu, and Daqing Sun
- Subjects
TOR Serine-Threonine Kinases ,Interstitial Cells of Cajal ,General Biochemistry, Genetics and Molecular Biology ,Mice ,MicroRNAs ,Proto-Oncogene Proteins c-kit ,Colonic Neoplasms ,Autophagy ,Animals ,Humans ,RNA, Messenger ,Gastrointestinal Transit ,Constipation ,Proto-Oncogene Proteins c-akt ,Signal Transduction - Abstract
Objective: To explore the mechanism by which miR-129-3p affected the autophagy of interstitial cells of Cajal (ICCs) in slow transit constipation tissues through the SCF C-kit signaling pathway. Methods: Colon samples from 20 Slow transit constipation (STC) patients who underwent total colectomy plus ileorectal anastomosis or subtotal colon resection plus anti-peristaltic rectal anastomosis were collected in our hospital. The colon of 20 non-STC patients was used as control. The control of this study was 20 patients undergoing radical surgery for colon cancer (left colon cancer) in our hospital. Fifty healthy SPF Kunming mice were purchased from Liaoning Changsheng Biotechnology Co., Ltd. Results: The mRNA expression of miR-129-3p in the STC group was lower than that in the control group (CTLR) group (P
- Published
- 2021
24. A Commentary on 'Construction of a nomogram to predict overall survival for patients with M1 stage of colorectal cancer: A retrospective cohort study' (Int J Surg 2019;72:96–101)
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Song Wang, Yong Liu, Zhiwei Yao, Lushun Ma, and Daqing Sun
- Subjects
Surgery ,General Medicine - Published
- 2022
25. A commentary on 'Primary tumor removal improves the prognosis in patients with stage IV breast cancer: A population-based study (Cohort study)' (Int J Surg 2020;83:109–114)
- Author
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Song Wang, Yiyuan Zhang, Fangxu Yin, and Daqing Sun
- Subjects
Surgery ,General Medicine - Published
- 2022
26. Endometrial regenerative cells with galectin-9 high-expression attenuate experimental autoimmune hepatitis
- Author
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Dejun Kong, Bingbing Ren, Jingpeng Hao, Daqing Sun, Yafei Qin, Guangming Li, Hong Qin, Hao Wang, Hongda Wang, and Yiming Zhao
- Subjects
Medicine (General) ,T cell ,Galectins ,Cell ,Medicine (miscellaneous) ,QD415-436 ,Autoimmune hepatitis ,Biology ,Biochemistry ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Endometrium ,Mice ,R5-920 ,Immune system ,Antigen ,medicine ,Animals ,Galectin-9 ,Research ,Cell Biology ,medicine.disease ,Mice, Inbred C57BL ,Hepatitis, Autoimmune ,medicine.anatomical_structure ,Cancer research ,Molecular Medicine ,Female ,Liver function ,Stem cell ,Endometrial regenerative cell ,CD8 ,Concanavalin A-induced hepatitis - Abstract
Background Autoimmune hepatitis (AIH) is a T cell-mediated immune disease that activates abnormally against hepatic antigens. We have previously reported that endometrial regenerative cells (ERCs) were a novel source of adult stem cells, which exhibiting with powerful immunomodulatory effects. Galectin-9 (Gal-9) is expressed in ERCs and plays an important role in regulating T cell response. This study aims to explore the role of ERCs in attenuation of AIH and to determine the potential mechanism of Gal-9 in ERC-mediated immune regulation. Methods ERCs were obtained from menstrual blood of healthy female volunteers. In vitro, ERCs were transfected with lentivirus vectors carrying LGALS9 gene and encoding green fluoresce protein (GFP-Gal-9-LVs) at a MOI 50, Gal-9 expression in ERCs was detected by ELISA and Q-PCR. CD4+ T cells isolated from C57BL/6 mouse spleen were co-cultured with ERCs. The proliferation of CD4+ T cells was detected by CCK-8 kit and the level of Lck/zap-70/LAT protein was measured by western blot. Furthermore, AIH was induced by ConA in C57BL/6 mice which were randomly assigned to untreated, unmodified ERC-treated and Gal-9 high-expressing ERC-treated groups. Histopathological score, liver function, CD4+/CD8+ cell infiltration in liver tissues, the proportion of immune cells in the spleen and liver, and ERC tracking were performed accordingly to assess the progression degree of AIH. Results After transfecting with GFP-Gal-9-LVs, Gal-9 expression in ERCs was significantly increased. Additionally, Gal-9 high-expressing ERCs effectively inhibited CD4+ T cell proliferation and downregulated CD4+ T cell active related proteins p-Lck/p-ZAP70/p-LAT in vitro. Furthermore, treatment with Gal-9 high-expressing ERCs restored liver function, ameliorated liver pathological damage, inhibit CD4+ and CD8+ T cell proliferation and suppress Th1 and Th17 cell response in the hepatitis mice. In addition, Gal-9 high-expressing ERCs further markedly enhanced the level of IL-10 but reduced the levels of IFN-γ, TNF-α, and IL-4 in mouse sera and liver. Cell tracking also showed that ERCs could migrate to the damaged liver organs. Conclusions The results suggested that Gal-9 was an essential modulator, which was required by ERCs in regulating T cell response and attenuating ConA-induced experimental hepatitis. And also, it provides a novel idea for the clinical treatment of AIH.
- Published
- 2021
27. Discovery and in Vivo Evaluation of Macrocyclic Mcl-1 Inhibitors Featuring an α-Hydroxy Phenylacetic Acid Pharmacophore or Bioisostere
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Gwenaella Rescourio, Ana Z. Gonzalez, Salman Jabri, Brian Belmontes, Gordon Moody, Doug Whittington, Xin Huang, Sean Caenepeel, Mario Cardozo, Alan C. Cheng, David Chow, Hannah Dou, Adrie Jones, Ron C. Kelly, Yihong Li, Mike Lizarzaburu, Mei-Chu Lo, Rommel Mallari, Cesar Meleza, Yosup Rew, Scott Simonovich, Daqing Sun, Simon Turcotte, Xuelei Yan, Simon G. Wong, Evelyn Yanez, Manuel Zancanella, Jonathan Houze, Julio C. Medina, Paul E. Hughes, and Sean P. Brown
- Subjects
Sulfonamides ,Administration, Oral ,Biological Availability ,Mice, Nude ,Antineoplastic Agents ,Hydrogen Bonding ,Crystallography, X-Ray ,Xenograft Model Antitumor Assays ,Rats, Sprague-Dawley ,Structure-Activity Relationship ,Drug Stability ,Cell Line, Tumor ,Drug Design ,Drug Discovery ,Animals ,Humans ,Myeloid Cell Leukemia Sequence 1 Protein ,Molecular Medicine ,Female ,Multiple Myeloma ,Phenylacetates - Abstract
Overexpression of the antiapoptotic protein Mcl-1 provides a survival advantage to some cancer cells, making inhibition of this protein an attractive therapeutic target for the treatment of certain types of tumors. Herein, we report our efforts toward the identification of a novel series of macrocyclic Mcl-1 inhibitors featuring an α-hydroxy phenylacetic acid pharmacophore or bioisostere. This work led to the discovery of
- Published
- 2019
28. Discovery of a Potent Steroidal Glucocorticoid Receptor Antagonist with Enhanced Selectivity against the Progesterone and Androgen Receptors (OP-3633)
- Author
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Xi Chen, John Eksterowicz, Jessica Sun, Tatiana Zavorotinskaya, Valeria R. Fantin, Xuelei Yan, Wayne Kong, Dena Sutimantanapi, Yosup Rew, Xiaohui Du, Haiying Zhou, Liusheng Zhu, Daqing Sun, Tom Huang, Qiuping Ye, Julio C. Medina, and Nadine Jahchan
- Subjects
Models, Molecular ,Pharmacology ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Receptors, Glucocorticoid ,Glucocorticoid receptor ,Drug Discovery ,Progesterone receptor ,Androgen Receptor Antagonists ,medicine ,Humans ,Receptor ,Triple-negative breast cancer ,030304 developmental biology ,0303 health sciences ,Chemistry ,Antiglucocorticoid ,Antagonist ,Mifepristone ,0104 chemical sciences ,Androgen receptor ,010404 medicinal & biomolecular chemistry ,Receptors, Androgen ,Molecular Medicine ,Receptors, Progesterone ,medicine.drug - Abstract
Structure-based modification of mifepristone (1) led to the discovery of novel mifepristone derivatives with improved selectivity profile. Addition of a methyl group at the C10 position of the steroid has a significant impact on progesterone receptor (PR) and androgen receptor (AR) activity. Within this series, OP-3633 (15) emerged as a glucocorticoid receptor (GR) antagonist with increased selectivity against PR and AR, improved cytochrome P450 inhibition profile, and significantly improved pharmacokinetic properties compared to 1. Furthermore, 15 demonstrated substantial inhibition of GR transcriptional activity in the GR positive HCC1806 triple negative breast cancer xenograft model. Overall, compound 15 is a promising GR antagonist candidate to clinically evaluate the impact of GR inhibition in reversal or prevention of therapy resistance.
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- 2019
29. A Novel Object Detection and Localization Approach via Combining Vision with Lidar Sensor
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Weihao Li, Fangjian Yang, Haoyang Yuan, Wei Liu, Daqing Sun, and Liyong Fang
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Lidar ,Artificial neural network ,Computer science ,business.industry ,Robustness (computer science) ,Robot ,Computer vision ,Artificial intelligence ,business ,Object (computer science) ,Convolutional neural network ,Object detection ,Convolution - Abstract
This paper addresses the problem of object detecting and localization with a lack of global vision object information during the movement of a robot. A novel two components vision-based scheme is proposed in this paper. One is a light-weight convolution neural network (CNN) which is used to realize the detection of an object and its training model parameters are decreased to apply to the embedded system. The other is the lidar fusion structure which provides extra information of an object to improve the relative-localization capability of the robot. Experiments are designed to verify the effectiveness of this scheme. According to the results, compared with the existing method such as Yolov4-tiny, our scheme prominently increases the FPS of object detection by 60% and the two components enhance the robustness than the conventional method.
- Published
- 2021
30. Discovery of potent and selective non-steroidal glucocorticoid receptor antagonists
- Author
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Dena Sutimantanapi, Yosup Rew, Xiaohui Du, Lori Friedman, Tatiana Zavorotinskaya, Jessica Sun, Haiying Zhou, Hiroyuki Kawai, John Eksterowicz, Tom Huang, Daqing Sun, Qiuping Ye, Johnny Pham, wayne kong, Jared Moore, and kejia wu
- Published
- 2020
31. Orally Bioavailable Small-Molecule CD73 Inhibitor (OP-5244) Reverses Immunosuppression through Blockade of Adenosine Production
- Author
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Tatiana Zavorotinskaya, Natalie Yuen, Xi Chen, Daqing Sun, Dena Sutimantanapi, Jessica Sun, Todd C. Metzger, Jae H. Chang, Yuping Chen, John Eksterowicz, Valeria Fantin, Wayne Kong, Brenda Chan, Jared Moore, Xiaohui Du, Qiuping Ye, Chudi Ndubaku, Tom Huang, Lori Friedman, Melissa R. Junttila, Frank Duong, and Brian R Blank
- Subjects
Adenosine ,medicine.medical_treatment ,Organophosphonates ,Administration, Oral ,Adenosinergic ,Pharmacology ,CD8-Positive T-Lymphocytes ,GPI-Linked Proteins ,01 natural sciences ,03 medical and health sciences ,Structure-Activity Relationship ,Dogs ,Cancer immunotherapy ,In vivo ,Cell Line, Tumor ,Drug Discovery ,medicine ,Structure–activity relationship ,Animals ,Humans ,Immunologic Factors ,Enzyme Inhibitors ,5'-Nucleotidase ,030304 developmental biology ,0303 health sciences ,Mice, Inbred BALB C ,Molecular Structure ,Chemistry ,Immunosuppression ,Nucleosides ,Stereoisomerism ,0104 chemical sciences ,Rats ,010404 medicinal & biomolecular chemistry ,Macaca fascicularis ,Cell culture ,Molecular Medicine ,CD8 ,medicine.drug - Abstract
The adenosinergic pathway represents an attractive new therapeutic approach in cancer immunotherapy. In this pathway, ecto-5-nucleotidase CD73 has the unique function of regulating production of immunosuppressive adenosine (ADO) through the hydrolysis of AMP. CD73 is overexpressed in many cancers, resulting in elevated levels of ADO that correspond to poor patient prognosis. Therefore, reducing the level of ADO via inhibition of CD73 is a potential strategy for treating cancers. Based on the binding mode of adenosine 5'-(α,β-methylene)diphosphate (AOPCP) with human CD73, we designed a series of novel monophosphonate small-molecule CD73 inhibitors. Among them, OP-5244 (35) proved to be a highly potent and orally bioavailable CD73 inhibitor. In preclinical studies, 35 completely inhibited ADO production in both human cancer cells and CD8+ T cells. Furthermore, 35 lowered the ratio of ADO/AMP significantly and reversed immunosuppression in mouse models, indicating its potential as an in vivo tool compound for further development.
- Published
- 2020
32. Inflammatory Indicator and Hematological Indices in Contrast Induced Nephropathy among Patients Receiving Coronary Intervention: A Systematic Review and Meta-Analysis
- Author
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Guojing Zhang, Jinmiao Wang, Chao Ma, Daqing Sun, Xiaoyan Wu, and Enyuan Zhang
- Subjects
medicine.medical_specialty ,biology ,medicine.diagnostic_test ,business.industry ,C-reactive protein ,Contrast-induced nephropathy ,Red blood cell distribution width ,Hematocrit ,medicine.disease ,Gastroenterology ,cardiology ,Meta-analysis ,Internal medicine ,Intervention (counseling) ,biology.protein ,medicine ,Neutrophil to lymphocyte ratio ,business - Abstract
Background: Strong indicators of inflammation, such as C-reactive protein (CRP), hypersensitive CRP (hs-CRP), and a series of hematological indices, including platelet to lymphocyte ratio (PLR), neutrophil to lymphocyte ratio (NLR), hematocrit (HCT) and red blood cell distribution width (RDW), are regarded related with the incidence of contrast induced nephropathy (CIN) closely. Whereas, it remains unclear whether they can function as predictors of CIN onset. The objective of this meta-analysis was to determine the relationship between above indicators and CIN incidence among patients receiving coronary intervention. Methods: Clinical studies were retrieved from the electronic databases of PubMed, EMBASE, Google Scholar, Clinical Trials, and science direct from their inception to June 3rd, 2020. Meta-analysis was performed on pool eligible studies. Two reviewers screened all titles and abstracts and independently assessed all articles. Results: A total of 26 studies involving 29,454 patients were included in the meta-analysis. Pooled analysis results revealed that patients with higher CRP (odds ratio [OR]=1.06, 95% confidence interval [CI]: 1.01–1.12, P=0.02), hs-CRP (OR=1.03, 95% CI: 1.01–1.06, P=0.004), NLR (OR=1.11, 95% CI: 1.01–1.20, P=0.02), RDW (OR=1.35, 95% CI: 1.19–1.53, P
- Published
- 2020
33. Precise annotation of human, chimpanzee, rhesus macaque and mouse mitochondrial genomes leads to insight into mitochondrial transcription in mammals
- Author
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Ze Chen, Defu Chen, Daqing Sun, Tung On Yau, Zhi Cheng, Shan Gao, Bo Wang, Stephen C. Barker, Xiufeng Jin, and Wenjun Bu
- Subjects
Mitochondrial DNA ,Pan troglodytes ,Transcription, Genetic ,Computational biology ,Genome ,Conserved sequence ,03 medical and health sciences ,Annotation ,Mice ,0302 clinical medicine ,Transcription (biology) ,Animals ,Humans ,RNA, Antisense ,Molecular Biology ,Conserved Sequence ,030304 developmental biology ,Mammals ,0303 health sciences ,biology ,Base Sequence ,Genome, Human ,RNA ,Molecular Sequence Annotation ,Cell Biology ,biology.organism_classification ,Macaca mulatta ,Rhesus macaque ,Genes, Mitochondrial ,030220 oncology & carcinogenesis ,Mitochondrial transcription ,Genome, Mitochondrial ,Transcription Initiation Site ,Research Paper - Abstract
In the present study, we applied our 'precise annotation' to the mitochondrial (mt) genomes of human, chimpanzee, rhesus macaque and mouse using 5' and 3' end small RNAs. Our new annotations updated previous annotations. In particular, our new annotations led to two important novel findings: (1) the identification of five Conserved Sequence Blocks (CSB1, CSB2, CSB3, LSP and HSP) in the control regions; and (2) the annotation of Transcription Initiation and novel Transcription Termination Sites. Based on these annotations, we proposed a novel model of mt transcription which can account for the mt transcription and its regulation in mammals. According to our model, Transcription Termination Sites function as switches to regulate the production of short, long primary transcripts and uninterrupted transcription, rather than simply terminate the mt transcription. Moreover, the expression levels of mitochondrial transcription termination factors control the proportions of rRNAs, mRNAs and lncRNAs in total mt RNA. Our findings point to the existence of many other, as yet unidentified, Transcription Termination Sites in mammals.
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- 2020
34. Discovery of a Potent and Selective Steroidal Glucocorticoid Receptor Antagonist (ORIC-101)
- Author
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Lawrence R. McGee, Haiying Zhou, Xuelei Yan, John Eksterowicz, Elizabeth Huang, Joanna Waszczuk, Daqing Sun, Chelsea Chen, Dena Sutimantanapi, Xiaohui Du, Valeria Fantin, Hiroyuki Kawai, Tatiana Zavorotinskaya, Erica Jackson, Julio C. Medina, Yosup Rew, Liusheng Zhu, Nadine Jahchan, Tom Huang, and Qiuping Ye
- Subjects
0301 basic medicine ,Swine ,Androgen Receptor Positive ,Pharmacology ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Hormone Antagonists ,Receptors, Glucocorticoid ,0302 clinical medicine ,Glucocorticoid receptor ,Drug Discovery ,Tumor Cells, Cultured ,medicine ,Animals ,Humans ,Tissue Distribution ,Receptor ,Ovarian Neoplasms ,Antiglucocorticoid ,Antagonist ,Mifepristone ,Xenograft Model Antitumor Assays ,Rats ,Androgen receptor ,030104 developmental biology ,Nuclear receptor ,chemistry ,030220 oncology & carcinogenesis ,Swine, Miniature ,Molecular Medicine ,Female ,medicine.drug - Abstract
The glucocorticoid receptor (GR) has been linked to therapy resistance across a wide range of cancer types. Preclinical data suggest that antagonists of this nuclear receptor may enhance the activity of anticancer therapy. The first-generation GR antagonist mifepristone is currently undergoing clinical evaluation in various oncology settings. Structure-based modification of mifepristone led to the discovery of ORIC-101 (28), a highly potent steroidal GR antagonist with reduced androgen receptor (AR) agonistic activity amenable for dosing in androgen receptor positive tumors and with improved CYP2C8 and CYP2C9 inhibition profile to minimize drug-drug interaction potential. Unlike mifepristone, 28 could be codosed with chemotherapeutic agents readily metabolized by CYP2C8 such as paclitaxel. Furthermore, 28 demonstrated in vivo antitumor activity by enhancing response to chemotherapy in the GR+ OVCAR5 ovarian cancer xenograft model. Clinical evaluation of safety and therapeutic potential of 28 is underway.
- Published
- 2018
35. Precise annotation of human, chimpanzee, rhesus macaque and mouse mitochondrial genomes using 5’ and 3’ end small RNAs
- Author
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Daqing Sun, Ze Chen, Tung On Yau, Defu Chen, Xiufeng Jin, Haishuo Ji, Wenjun Bu, Zhi Cheng, Bo Wang, and Shan Gao
- Subjects
Mitochondrial DNA ,Rhesus macaque ,Molecular phylogenetics ,Computational biology ,Biology ,Mitochondrion ,biology.organism_classification ,Genome ,Gene ,Function (biology) ,Conserved sequence - Abstract
Using 5’ and 3’ end small RNAs, we annotated human, chimpanzee, rhesus macaque and mouse mitochondrial genomes at 1 base-pair (bp) resolution to cover both strands of the mammalian mitochondrial genome entirely without leaving any gaps or overlaps. The precise annotation of all coding and non-coding genes (e.g. ncMT1, MDL2 and MDL1AS) led to the discovery of novel functions and mechanisms of mitochondrion. In this study, we defined the conserved sequence block (CSB) region to span five CSBs (CSB1, CSB2, CSB3, LSP and HSP) and identified the motifs of five CSBs in the mitochondrial displacement loop (D-loop) regions of 52 mammals. The conserved arrangement of these five CSBs in 17 primates inspired us to investigate the function of the mtDNA D-loop, which has been puzzling scientists for more than 50 years. We found that 5’ sRNAs of MDL1AS control the expression levels of mitochondrial genes as a whole by a negative feedback mechanism. Thus, the precise annotations of three CSBs (CSB2, LSP and HSP) in more species will help to understand the function of the mtDNA D-loop. The precision annotation of animal mitochondrial genomes also provides abundant information for studying the molecular phylogenetics and evolution of animals.
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- 2019
36. A knock-in mouse model of Pendred syndrome with Slc26a4 L236P mutation
- Author
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Xiaolong Fu, Tingting Zhang, Sen Zhang, Daqing Sun, Jiangang Gao, Zongzhuang Wen, Zhenzu Li, Aizhen Zhang, Haixia Zhu, and Jian Zhang
- Subjects
0301 basic medicine ,Pathology ,medicine.medical_specialty ,Hearing loss ,Hearing Loss, Sensorineural ,Biophysics ,Mutation, Missense ,Biology ,medicine.disease_cause ,Biochemistry ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Hair Cells, Auditory ,otorhinolaryngologic diseases ,medicine ,Animals ,Humans ,Vestibular dysfunction ,Inner ear ,Amino Acid Sequence ,Gene Knock-In Techniques ,Molecular Biology ,Pendred syndrome ,Mutation ,Absolute threshold of hearing ,Base Sequence ,Cell Biology ,medicine.disease ,Phenotype ,Mice, Mutant Strains ,Disease Models, Animal ,030104 developmental biology ,medicine.anatomical_structure ,Amino Acid Substitution ,Sulfate Transporters ,030220 oncology & carcinogenesis ,Ear, Inner ,Microscopy, Electron, Scanning ,sense organs ,medicine.symptom ,Torticollis ,Goiter, Nodular - Abstract
SLC26A4 gene mutations lead to Pendred syndrome and non-syndromic hearing loss (DFNB4). The mouse model is well used to study the pathology of Pendred syndrome, however, mice with different Slc26a4 mutations exhibit different phenotypes, and these mice have severe deafness and inner ear malformations that are not imitated less severely Human phenotype. In this study, we generated a knock-in mouse model of Pendred syndrome with Slc26a4 L236P mutation to mimic the most common mutation found in human. Some L236P mice were observed to have significant vestibular dysfunction including torticollis and circling, the giant otoconia and destruction of the otoconial membrane was observed in L236P mice. Unlike other profoundly deafness in Slc26a4 mouse model, L236P mice present mild to profound hearing loss, consistent with the hearing threshold, inner ear hair cells also lost from slight to significant. Together, these data demonstrate that the L236P mouse phenotype is more similar to the human phenotype and should be used as a tool for further research into the human Pendred syndrome.
- Published
- 2019
37. Cdc14a has a role in spermatogenesis, sperm maturation and male fertility
- Author
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Aizhen Zhang, Jian Zhang, Dongyue Liu, Zongzhuang Wen, Guangkai Zhang, Bin Wu, Chao Ye, Daqing Sun, Haixia Zhu, Jiangang Gao, Jing Lin, and Yu Xiao
- Subjects
Male ,Mice, Knockout ,Offspring ,Embryo ,Cell Biology ,Biology ,medicine.disease ,Spermatozoa ,Sperm ,Male infertility ,Sperm Maturation ,Andrology ,Seminiferous tubule ,medicine.anatomical_structure ,Spermatocytes ,Testis ,Knockout mouse ,Sperm Motility ,medicine ,Animals ,Protein Tyrosine Phosphatases ,Spermatogenesis ,Infertility, Male ,Sperm motility - Abstract
Cdc14a is an evolutionarily conserved dual-specific protein phosphatase, and it plays different roles in different organisms. Cdc14a mutations in human have been reported to cause male infertility, while the specific role of Cdc14a in regulation of the male reproductive system remains elusive. In the present study, we established a knockout mouse model to study the function of Cdc14a in male reproductive system. Cdc14a-/- male mice were subfertile and they could only produce very few offspring. The number of sperm was decreased, the sperm motility was impaired, and the proportion of sperm with abnormal morphology was elevated in Cdc14a-/- mice. When we mated Cdc14a-/- male mice with wild-type (WT) female mice, fertilized eggs could be found in female fallopian tubes, however, the majority of these embryos died during development. Some empty spaces were observed in seminiferous tubule of Cdc14a-/- testes. Compared with WT male mice, the proportions of pachytene spermatocytes were increased and germ cells stained with γH2ax were decreased in Cdc14a-/- male mice, indicating that knockout of Cdc14a inhibited meiotic initiation. Subsequently, we analyzed the expression levels of some substrate proteins of Cdc14a, including Cdc25a, Wee1, and PR-Set7, and compared those with WT testes, in which the expression levels of these proteins were significantly increased in Cdc14a-/- testes. Our results revealed that Cdc14a-/- male mice are highly subfertile, and Cdc14a is essential for normal spermatogenesis and sperm function.
- Published
- 2020
38. Abstract LB-115: An orally bioavailable inhibitor of CD73 reverts intratumoral immunosuppression and promotes anti-tumor responses
- Author
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Hiro Kawai, Jared Moore, Wayne Kong, Jessica Sun, Brian R Blank, Xiaohui Du, Johnny Pham, Melissa R. Junttila, Yosup Rew, Kejia Wu, Brenda Chan, Yuping Chen, Lori Friedman, Chien-Hung Yeh, Daqing Sun, Todd C. Metzger, Tatiana Zavorotinskaya, Frank Duong, Natalie Yuen, Chelsea Chen, and Dena Sutimantanapi
- Subjects
0301 basic medicine ,Cancer Research ,Chemistry ,T cell ,Antigen presentation ,Dendritic cell ,Adenosine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Immune system ,Oncology ,In vivo ,030220 oncology & carcinogenesis ,medicine ,Cancer research ,CD80 ,Ex vivo ,medicine.drug - Abstract
The 5' ecto-nucleotidase CD73 is dynamically expressed in distinct biological contexts as a means to increase the adenosine metabolite, which functions to limit immune activation and prevent excessive inflammation. CD73 activity is required for the final step of adenosine production. In the context of tumors, excessive CD73-mediated adenosine generation impairs anti-tumor immune responses. Here, we show that an orally bioavailable small molecule inhibitor of CD73 can prevent adenosine generation, relieve adenosine-driven immunosuppression within the tumor in vivo and generate anti-tumor efficacy. In vitro analysis confirmed the substantial suppressive effects of adenosine on murine CD8+ T cells, cross-presenting dendritic cells, and macrophages. NECA, a stable analog of adenosine, impaired immature bone-marrow precursor differentiation into CD103+ dendritic cells, a subset which is critical for tumor-derived antigen presentation to naïve T cells. Interestingly, NECA also inhibited the ability of macrophages to upregulate the M1 marker, CD80, in both the presence and absence of additional polarizing stimuli. Furthermore, OR-558, a CD73 small molecule inhibitor, could fully inhibit CD73-mediated adenosine production and completely restore T cell activation at sub-nanomolar concentrations. Prior work in CD73 germline knock-out animals has shown that EG7 syngeneic tumor growth is highly dependent on CD73. Building on this knowledge, we next we sought to evaluate CD73 inhibition on AMP to adenosine conversion ex vivo in EG7 syngeneic tumor extracts and indeed observed that OR-558 treatment could significantly impair adenosine production within the tumor milieu. This finding translated to the in vivo tumor setting, where single agent anti-tumor efficacy was observed with continuous OR-558 treatment. Anti-tumor efficacy coincided with significantly decreased intra-tumoral adenosine levels and immune modulation, such as increased intratumoral T cell activation, dendritic cell maturation, and M1 macrophage polarization. Lastly, we determined the bioavailability of orally dosed OR-558 in EG7 tumor-bearing mice and found that significant single agent anti-tumor efficacy was also achievable with once-daily oral dosing of OR-558. Taken together, these data demonstrate that adenosine has pleiotropic immunosuppressive effects and inhibition of CD73-mediated adenosine production in vivo is sufficient to reverse these immune effects and enhance anti-tumor immunity. These results support clinical development of orally bioavailable CD73 small molecule inhibitors. Citation Format: Todd Metzger, Brian Blank, Brenda Chan, Chelsea Chen, Yuping Chen, Xiaohui Du, Frank Duong, Lori Friedman, Melissa Junttila, Hiro Kawai, Wayne Kong, Jared Moore, Johnny Pham, Yosup Rew, Daqing Sun, Jessica Sun, Dena Sutimantanapi, Kejia Wu, Chien-Hung Yeh, Natalie Yuen, Tatiana Zavorotinskaya. An orally bioavailable inhibitor of CD73 reverts intratumoral immunosuppression and promotes anti-tumor responses [abstract]. In: Proceedings of the Annual Meeting of the American Association for Cancer Research 2020; 2020 Apr 27-28 and Jun 22-24. Philadelphia (PA): AACR; Cancer Res 2020;80(16 Suppl):Abstract nr LB-115.
- Published
- 2020
39. Abstract 1037: Orally available small molecule CD73 inhibitor reverses immunosuppression through blocking of adenosine production
- Author
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Yuping Chen, Wayne Kong, Xiaohui Du, Jared Moore, Dena Sutimantanapi, Jessica Sun, Melissa R. Junttila, Xi Chen, Natalie Yuen, Todd C. Metzger, Lori Friedman, Daqing Sun, Tom Huang, Frank Duong, Tatiana Zavorotinskaya, Brian R Blank, and Brenda Chan
- Subjects
0301 basic medicine ,Cancer Research ,Tumor microenvironment ,Angiogenesis ,Chemistry ,medicine.medical_treatment ,Cancer ,Pharmacology ,medicine.disease ,Adenosine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Oncology ,Cancer immunotherapy ,In vivo ,Tumor progression ,030220 oncology & carcinogenesis ,medicine ,Ex vivo ,medicine.drug - Abstract
CD73 has emerged as an attractive target for cancer immunotherapy. CD73 (ecto-5-nucleotidase) is a glycosyl phosphatidyl inositol (GPI)-anchored cell surface protein and catalyzes the hydrolysis of AMP into immunosuppressive adenosine and inorganic phosphate. CD73 is widely overexpressed in tumor microenvironments (TME) of many cancers, resulting in elevated levels of extra cellular adenosine (ADO). ADO plays a critical role in tumor progression through immune suppression, chemotherapy resistance, metastasis and angiogenesis. Therefore, reducing the level of adenosine via inhibition of CD73 has become a potential strategy for treating cancers. Here we report our medicinal chemistry efforts in developing orally available small molecule CD73 inhibitors. Based on the binding mode of adenosine 5'-(α,β-methylene)diphosphate (APCP) with CD73, we designed a novel series of monophosphate CD73 inhibitors, which are highly potent and orally bioavailable. In preclinical studies, OP-5244 inhibited ADO production completely in human cancer cells and CD8+ T cells. It also showed dose-dependent inhibitory effects on CD73 activity in various tumors ex vivo. Furthermore, OP-5244 showed PK/PD efficacy through lowering of ADO/AMP ratio and reversal of immunosuppression in vivo. Citation Format: Xiaohui Du, Brian Blank, Brenda Chan, Xi Chen, Yuping Chen, Frank Duong, Lori Friedman, Tom Huang, Melissa R. Junttila, Wayne Kong, Todd Metzger, Jared Moore, Daqing Sun, Jessica Sun, Dena Sutimantanapi, Natalie Yuen, Tatiana Zavorotinskaya. Orally available small molecule CD73 inhibitor reverses immunosuppression through blocking of adenosine production [abstract]. In: Proceedings of the Annual Meeting of the American Association for Cancer Research 2020; 2020 Apr 27-28 and Jun 22-24. Philadelphia (PA): AACR; Cancer Res 2020;80(16 Suppl):Abstract nr 1037.
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- 2020
40. Abstract 1023: CD73 inhibition with a novel orally bioavailable small molecule blocks adenosine production and rescues T-cells activation
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Yuping Chen, Melissa R. Junttila, Natalie Yuen, Jared Moore, Dena Sutimantanapi, Tatiana Zavorotinskaya, Daqing Sun, Todd C. Metzger, Brian R Blank, Wayne Kong, Lori Friedman, Tom Huang, Jessica Sun, Xiaohui Du, Chelsea Chen, Brenda Chan, and Frank Duong
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0301 basic medicine ,Cancer Research ,Tumor microenvironment ,Chemistry ,Pharmacology ,Adenosine ,Proinflammatory cytokine ,Dephosphorylation ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Oncology ,Gene expression ,medicine ,Cytotoxic T cell ,Ectonucleotidase ,CD8 ,030215 immunology ,medicine.drug - Abstract
Adenosine has emerged as a key immunosuppressive metabolite within the tumor microenvironment (TME). A persistently elevated concentration of adenosine in TME can impair immune control of tumor growth by diminishing cytotoxic T-cell responses and function of natural killer cells while augmenting the suppressive activity of myeloid and regulatory T-cells. The ectonucleotidase, CD73 mediates the final dephosphorylation step in the conversion of extracellular ATP to adenosine. Overexpression of CD73 is observed in many solid tumors and correlates with unfavorable clinical outcome. We aimed to overcome adenosine-driven immunosuppression by developing an orally bioavailable, best-in-class, small molecule inhibitor of CD73. Here, we show superior potency of our selective AMP-competitive CD73 inhibitor in blocking adenosine generation by multiple cell types. CD73 inhibitor activity was assessed by directly measuring the generation of adenosine from AMP by LC-MS/MS. In CD73 expressing cells, potent and complete inhibition of CD73 ectonucleotidase activity was observed. To test the functional consequence of CD73 inhibition, we interrogated the effects of CD73 inhibitors on CD8+ T-cell function upon exposure to AMP. CD73 expressed on T-cells is sufficient to drive adenosine generation from AMP resulting in severely suppressed proliferation, diminished production of inflammatory cytokines and reduced expression of activation markers. Our inhibitors successfully counteracted the effects of AMP and completely rescued all aspects of CD8+ T-cell activation. Interestingly, we found that the concentration of AMP in tumors may vary from micromolar to millimolar levels, underscoring the necessity of AMP-competitive CD73 inhibitors to be efficacious in a high AMP environment. We demonstrated that nanomolar concentrations of our CD73 inhibitors can efficiently rescue T-cell function in the presence of millimolar AMP concentrations. We are currently conducting biophysical studies to better understand this unique property of our inhibitors. We next aimed to identify an adenosine responsive gene signature in cytotoxic T-cells. RNA sequencing analysis of primary anti-CD3/28/2 activated CD8+ T-cells from human peripheral blood mononuclear cells revealed a unique set of genes persistently and similarly altered in response to both adenosine and AMP. Finally, we demonstrated that CD73 inhibitors can completely block gene expression changes of this AMP/adenosine-response signature. Discovery of an AMP/adenosine-response gene signature may help identify patients whose tumors harbor elevated adenosine signaling and would benefit from an orally bioavailable small molecule inhibitor of CD73 to reverse immunosuppression. Citation Format: Tatiana Zavorotinskaya, Brian Blank, Brenda Chan, Chelsea Chen, Yuping Chen, Xiaohui Du, Frank Duong, Lori Friedman, Tom Huang, Melissa R. Junttila, Wayne Kong, Todd C. Metzger, Jared T. Moore, Daqing Sun, Jessica Sun, Dena Sutimantanapi, Natalie Yuen. CD73 inhibition with a novel orally bioavailable small molecule blocks adenosine production and rescues T-cells activation [abstract]. In: Proceedings of the Annual Meeting of the American Association for Cancer Research 2020; 2020 Apr 27-28 and Jun 22-24. Philadelphia (PA): AACR; Cancer Res 2020;80(16 Suppl):Abstract nr 1023.
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- 2020
41. Abstract LB-A19: Intratumoral immunosuppression is reversed by blocking adenosine production with an oral inhibitor of CD73
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Dena Sutimantanapi, Jared Moore, Tatiana Zavorotinskaya, Brian R Blank, Lori Friedman, Chelsea Chen, Qiuping Ye, Frank Duong, Xiaohui Du, Daqing Sun, Natalie Yuen, Yuping Chen, Brenda Chan, Jessica Sun, Todd C. Metzger, and Valeria R. Fantin
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Cancer Research ,education.field_of_study ,Tumor microenvironment ,Chemistry ,T cell ,Population ,Adenosine ,medicine.anatomical_structure ,Immune system ,Oncology ,In vivo ,medicine ,Cancer research ,education ,Receptor ,CD80 ,medicine.drug - Abstract
Introduction: CD73 mediates the final dephosphorylation in the conversion of extracellular ATP to adenosine, a metabolite which signals through the A2 family of receptors. Like PD-1, adenosine appears to be part of a negative feedback loop to limit immune activation and prevent excessive inflammation in the context of tissue damage. However, intratumoral hypoxia likely drives excessive CD73-mediated adenosine generation and prevents optimal anti-tumor immune responses. We show that intratumoral adenosine levels are sufficient to drive pervasive suppression of multiple immune subsets in vitro and an orally bioavailable small molecule can prevent adenosine generation in vitro and within the tumor in vivo. Methods We examined the effects of adenosine signaling on multiple immune cell subsets through in vitro functional assays. We interrogated T cell activation, proliferation, and cytolytic activity, as well as NK cell function in vitro. Furthermore, we investigated and identified functional targets of adenosine signaling within T cells using transcriptomic and protein expression analyses. In addition, we performed in vitro myeloid differentiation assays to determine the effect of adenosine signaling on myeloid lineage maturation. Finally, we explored the activity of a novel, orally bioavailable inhibitor of CD73 in vitro and assessed its ability to rescue T cell activation and suppress AMP conversion to adenosine within the tumor microenvironment. Results and Conclusions We found that T cell-expressed CD73 was sufficient to drive adenosine generation from AMP in vitro, resulting in suppression of anti-CD3/CD28-induced T cell activation and proliferation and a reduced capacity to kill cognate antigen-expressing tumor cells. Adenosine-exposed T cells displayed decreased induction of markers associated with activation at both the mRNA and protein level, including Ki67, ICOS, and PD-1, while showing higher expression of naïve-associated CD73. Interestingly, we also observed a third subset of markers which were uniquely induced by adenosine. In addition to its activity on T cells, adenosine signaling caused functional suppression of NK cells in the presence of target Yac-1 cells. In the myeloid compartment, NECA, a stable analog of adenosine, prevented in vitro differentiation of CD103+ cross-presenting dendritic cells, a population which provides a critical stimulus to tumor-infiltrating T cells. Additionally, NECA impaired macrophage expression of CD80, a canonical M1 marker and mediator of T cell costimulation, in both the presence and absence of M1-polarizing IFNγ and LPS. Finally, we showed that a novel, orally bioavailable CD73 inhibitor was able to effectively inhibit AMP to adenosine conversion both in vitro and in vivo, while an anti-CD73 antibody had incomplete effects. Taken together, an orally bioavailable small molecule inhibitor of CD73 represents a potential therapeutic approach to reverse immunosuppression within the tumor microenvironment. Citation Format: Todd C Metzger, Brian R Blank, Brenda Chan, Chelsea Chen, Yuping Chen, Xiaohui Du, Frank L Duong, Valeria R. Fantin, Lori S Friedman, Jared T Moore, Daqing Sun, Jessica Sun, Dena Sutimantanapi, Qiuping Ye, Natalie Yuen, Tatiana Zavorotinskaya. Intratumoral immunosuppression is reversed by blocking adenosine production with an oral inhibitor of CD73 [abstract]. In: Proceedings of the AACR-NCI-EORTC International Conference on Molecular Targets and Cancer Therapeutics; 2019 Oct 26-30; Boston, MA. Philadelphia (PA): AACR; Mol Cancer Ther 2019;18(12 Suppl):Abstract nr LB-A19. doi:10.1158/1535-7163.TARG-19-LB-A19
- Published
- 2019
42. Pharmacokinetics and metabolism of AMG 232, a novel orally bioavailable inhibitor of the MDM2–p53 interaction, in rats, dogs and monkeys:in vitro–in vivocorrelation
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Guifen Xu, Daqing Sun, Wotang T Huang, Yun Ling, Bradley K. Wong, Min Jiang, Lixia Jin, Xuelei Yan, Steven H. Olson, and Qiuping Ye
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Male ,Health, Toxicology and Mutagenesis ,Metabolite ,Administration, Oral ,Biological Availability ,Acetates ,Pharmacology ,Toxicology ,Biochemistry ,Rats, Sprague-Dawley ,Mice ,chemistry.chemical_compound ,Dogs ,Glucuronides ,Species Specificity ,Pharmacokinetics ,In vivo ,medicine ,Animals ,Bile ,Humans ,Protein Kinase Inhibitors ,Biotransformation ,Piperidones ,Chemistry ,Haplorhini ,General Medicine ,Metabolism ,In vitro ,Rats ,Bioavailability ,medicine.anatomical_structure ,Hepatocyte ,Hepatocytes ,Microsomes, Liver ,Administration, Intravenous ,Drug metabolism - Abstract
1. AMG 232 is a novel inhibitor of the p53-MDM2 protein-protein interaction currently in Phase I clinical trials for multiple tumor indications. The objectives of the investigations reported in this article were to characterize the pharmacokinetic and drug metabolism properties of AMG 232 in pre-clinical species in vivo and in vitro, and in humans in vitro, and to predict its pharmacokinetics in humans through integrating PKDM data. 2. AMG 232 exhibited low clearance (0.25 × Qh) and moderate to high oral bioavailability in mice, rats and monkeys (42%), but high clearance (0.74 × Qh) and low oral exposure in dogs (18%). 3. Biotransformation was the major route of elimination of AMG 232 in rats, with only 7% of intravenously administered (14)C-labeled AMG 232 recovered as parent molecule in bile. The major metabolite was an acyl glucuronide as measured by in vivo rat studies and in vitro hepatocyte incubations in multiple species. 4. The in vitro-in vivo correlation of AMG 232 clearance was within 2-fold in pre-clinical species using hepatocytes. AMG 232 was predicted to exhibit low clearance, high volume distribution and long half-life in humans. The predictions are consistent with the preliminary human pharmacokinetic parameters of AMG 232 in clinical trials.
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- 2015
43. Discovery of AM-7209, a Potent and Selective 4-Amidobenzoic Acid Inhibitor of the MDM2–p53 Interaction
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Jason Duquette, Xin Huang, Dongyin Yu, Yun Ling, Jing Zhou, Yu Chung Wang, Daqing Sun, Sarah Wortman, John Eksterowicz, Qiuping Ye, Min Jiang, Jonathan D. Oliner, Lixia Jin, Alexander M. Long, Ana Z. Gonzalez, Peter Yakowec, Yihong Li, Steven H. Olson, Anne Y. Saiki, Hilary Plake Beck, Yosup Rew, Lawrence R. McGee, Julio C. Medina, Jonathan B. Houze, Jiasheng Fu, Jude Canon, Mcintosh Joel, Ada Chen, Brian M. Fox, Mei-Chu Lo, Xuelei Yan, Paul L. Shaffer, Zhihong Li, Tao Osgood, and Xiaoning Zhao
- Subjects
Models, Molecular ,Carboxylic acid ,Mice, Nude ,Antineoplastic Agents ,Pharmacology ,Mice ,Structure-Activity Relationship ,Pharmacokinetics ,In vivo ,Drug Discovery ,Tumor Cells, Cultured ,Animals ,Humans ,Potency ,Structure–activity relationship ,IC50 ,Cell Proliferation ,chemistry.chemical_classification ,Molecular Structure ,Drug discovery ,Rational design ,Proto-Oncogene Proteins c-mdm2 ,chemistry ,Colonic Neoplasms ,Molecular Medicine ,Female ,Tumor Suppressor Protein p53 ,Protein Binding - Abstract
Structure-based rational design and extensive structure-activity relationship studies led to the discovery of AMG 232 (1), a potent piperidinone inhibitor of the MDM2-p53 association, which is currently being evaluated in human clinical trials for the treatment of cancer. Further modifications of 1, including replacing the carboxylic acid with a 4-amidobenzoic acid, afforded AM-7209 (25), featuring improved potency (KD from ITC competition was 38 pM, SJSA-1 EdU IC50 = 1.6 nM), remarkable pharmacokinetic properties, and in vivo antitumor activity in both the SJSA-1 osteosarcoma xenograft model (ED50 = 2.6 mg/kg QD) and the HCT-116 colorectal carcinoma xenograft model (ED50 = 10 mg/kg QD). In addition, 25 possesses distinct mechanisms of elimination compared to 1.
- Published
- 2014
44. Transcription factor E2F1 promotes EMT by regulating ZEB2 in small cell lung cancer
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Xufang Chen, Daqing Sun, Lijun Kong, Zunling Li, Weiwei Qiao, and Tingting Wang
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Male ,0301 basic medicine ,endocrine system ,Cancer Research ,Epithelial-Mesenchymal Transition ,Lung Neoplasms ,lcsh:RC254-282 ,CDH1 ,Metastasis ,Small hairpin RNA ,03 medical and health sciences ,0302 clinical medicine ,Cell Movement ,Cell Line, Tumor ,Gene expression ,Genetics ,medicine ,Humans ,E2F1 ,Epithelial–mesenchymal transition ,Promoter Regions, Genetic ,ZEB2 ,Cell Proliferation ,Zinc Finger E-box Binding Homeobox 2 ,Small cell lung cancer ,biology ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,Small Cell Lung Carcinoma ,Up-Regulation ,respiratory tract diseases ,Gene Expression Regulation, Neoplastic ,SNAI2 ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,SNAI1 ,Cancer research ,biology.protein ,Female ,biological phenomena, cell phenomena, and immunity ,E2F1 Transcription Factor ,Research Article - Abstract
Background Epithelial-mesenchymal transition (EMT) is an early event in tumour invasion and metastasis, and widespread and distant metastasis at early stages is the typical biological behaviour in small cell lung cancer (SCLC). Our previous reports showed that high expression of the transcription factor E2F1 was involved in the invasion and metastasis of SCLC, but the role of E2F1 in the process of EMT in SCLC is unknown. Methods Immunohistochemistry was performed to evaluate the expressions of EMT related markers. Immunofluorescence was used to detect the expressions of cytoskeletal proteins and EMT related markers when E2F1 was silenced in SCLC cell lines. Adenovirus containing shRNA against E2F1 was used to knock down the E2F1 expression, and the dual luciferase reporter system was employed to clarify the regulatory relationship between E2F1 and ZEB2. Results In this study, we observed the remodelling of cytoskeletal proteins when E2F1 was silenced in SCLC cell lines, indicating that E2F1 was involved in the EMT in SCLC. Depletion of E2F1 promoted the expression of epithelial markers (CDH1 and CTNNB1) and inhibited the expression of mesenchymal markers (VIM and CDH2) in SCLC cell lines, verifying that E2F1 promotes EMT occurrence. Next, the mechanism by which E2F1 promoted EMT was explored. Among the CDH1 related inhibitory transcriptional regulators ZEB1, ZEB2, SNAI1 and SNAI2, the expression of ZEB2 was the highest in SCLC tissue samples and was highly consistent with E2F1 expression. ChIP-seq data and dual luciferase reporter system analysis confirmed that E2F1 could regulate ZEB2 gene expression. Conclusion Our data supports that E2F1 promotes EMT by regulating ZEB2 gene expression in SCLC. Electronic supplementary material The online version of this article (10.1186/s12885-017-3701-y) contains supplementary material, which is available to authorized users.
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- 2017
45. Additional file 1: of Transcription factor E2F1 promotes EMT by regulating ZEB2 in small cell lung cancer
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Tingting Wang, Xufang Chen, Weiwei Qiao, Lijun Kong, Daqing Sun, and Zunling Li
- Abstract
The specific primers for target genes. (DOCX 19 kb)
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- 2017
- Full Text
- View/download PDF
46. Optimization beyond AMG 232: Discovery and SAR of sulfonamides on a piperidinone scaffold as potent inhibitors of the MDM2-p53 protein–protein interaction
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Lawrence R. McGee, Jeffrey T. Mihalic, Yingcai Wang, Mei-Chu Lo, Jing Zhou, Steven H. Olson, Xiaoqi Chen, Frank Kayser, Jiang Zhu, Ada Chen, Jeffrey Deignan, Jonathan D. Oliner, Alexander M. Long, Daqing Sun, Ming Yu, Xin Huang, Qiuping Ye, Jiwen Jim Liu, Peter Yakowec, and Julio C. Medina
- Subjects
Models, Molecular ,Scaffold ,Clinical Biochemistry ,Molecular Conformation ,Pharmaceutical Science ,Acetates ,Pharmacology ,Crystallography, X-Ray ,Biochemistry ,Protein–protein interaction ,Structure-Activity Relationship ,Drug Discovery ,medicine ,Animals ,Humans ,Mdm2 p53 ,Molecular Biology ,Piperidones ,Sulfonamides ,Dose-Response Relationship, Drug ,Chemistry ,Organic Chemistry ,Sulfonamide (medicine) ,Proto-Oncogene Proteins c-mdm2 ,Rats ,Molecular Medicine ,Drug Screening Assays, Antitumor ,Tumor Suppressor Protein p53 ,Protein Binding ,medicine.drug - Abstract
We recently reported on the discovery of AMG 232, a potent and selective piperidinone inhibitor of the MDM2-p53 interaction. AMG 232 is being evaluated in human clinical trials for cancer. Continued exploration of the N-alkyl substituent of this series, in an effort to optimize interactions with the MDM2 glycine-58 shelf region, led to the discovery of sulfonamides such as compounds 31 and 38 that have similar potency, hepatocyte stability and rat pharmacokinetic properties to AMG 232.
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- 2014
47. Discovery of Potent and Simplified Piperidinone-Based Inhibitors of the MDM2–p53 Interaction
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Jiang Zhu, Tao Osgood, Xin Huang, Anne Y. Saiki, John Eksterowicz, Jiwen Jim Liu, Yosup Rew, Xiaoning Zhao, Qiuping Ye, Steven H. Olson, Julio C. Medina, Michael W. Gribble, David Chow, Jiasheng Fu, Ming Yu, Zhihong Li, Daqing Sun, Jude Canon, Dustin McMinn, Paul L. Shaffer, Xuelei Yan, Yingcai Wang, Brian M. Fox, Mei-Chu Lo, Jonathan D. Oliner, Dongyin Yu, Ada Chen, Michael D. Bartberger, and Jing Zhou
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Antitumor activity ,chemistry.chemical_compound ,Pharmacokinetics ,Chemistry ,Stereochemistry ,In vivo ,Organic Chemistry ,Drug Discovery ,Substituent ,Mdm2 p53 ,Biochemistry ,Combinatorial chemistry - Abstract
Continued optimization of the N-substituent in the piperidinone series provided potent piperidinone-pyridine inhibitors 6, 7, 14, and 15 with improved pharmacokinetic properties in rats. Reducing structure complexity of the N-alkyl substituent led to the discovery of 23, a potent and simplified inhibitor of MDM2. Compound 23 exhibits excellent pharmacokinetic properties and substantial in vivo antitumor activity in the SJSA-1 osteosarcoma xenograft mouse model.
- Published
- 2014
48. Selective and Potent Morpholinone Inhibitors of the MDM2–p53 Protein–Protein Interaction
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Ada Chen, Steven H. Olson, Alexander M. Long, John Eksterowicz, Michael D. Bartberger, Jing Zhou, Yosup Rew, Lawrence R. McGee, Mei-Chu Lo, Anne Y. Saiki, Dongyin Yu, Jason Duquette, Xuelei Yan, Ana Z. Gonzalez, Hilary Plake Beck, Jonathan B. Houze, Yun Ling, Mcintosh Joel, Jonathan D. Oliner, Sarah Wortman, Jude Canon, Daqing Sun, Dustin McMinn, Brian M. Fox, Paul L. Shaffer, Xiaoning Zhao, Tao Osgood, Lixia Jin, Xin Huang, Zhihong Li, David Chow, Qiuping Ye, Yihong Li, Jiasheng Fu, Peter Yakowec, and Julio C. Medina
- Subjects
Models, Molecular ,Stereochemistry ,Morpholines ,Molecular Conformation ,Antineoplastic Agents ,Acetates ,Crystallography, X-Ray ,Protein–protein interaction ,Mice ,Structure-Activity Relationship ,Cell Line, Tumor ,Drug Discovery ,Animals ,Humans ,Potency ,Structure–activity relationship ,Mdm2 p53 ,IC50 ,biology ,Chemistry ,Drug discovery ,Proto-Oncogene Proteins c-mdm2 ,Xenograft Model Antitumor Assays ,Rats ,Cell culture ,biology.protein ,Molecular Medicine ,Mdm2 ,Indicators and Reagents ,Tumor Suppressor Protein p53 - Abstract
We previously reported the discovery of AMG 232, a highly potent and selective piperidinone inhibitor of the MDM2-p53 interaction. Our continued search for potent and diverse analogues led to the discovery of novel morpholinone MDM2 inhibitors. This change to a morpholinone core has a significant impact on both potency and metabolic stability compared to the piperidinone series. Within this morpholinone series, AM-8735 emerged as an inhibitor with remarkable biochemical potency (HTRF IC50 = 0.4 nM) and cellular potency (SJSA-1 EdU IC50 = 25 nM), as well as pharmacokinetic properties. Compound 4 also shows excellent antitumor activity in the SJSA-1 osteosarcoma xenograft model with an ED50 of 41 mg/kg. Lead optimization toward the discovery of this inhibitor as well as key differences between the morpholinone and the piperidinone series will be described herein.
- Published
- 2014
49. Abstract 3822: ORIC-101 reverses a GR-driven EMT-like phenotype and sensitizes TNBC cells to chemotherapy
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Haiying Zhou, Jessica Sun, Wayne Kong, Yosup Rew, Xiaohui Du, John Eksterowicz, Daqing Sun, Qiuping Ye, Omar Kabbarah, and Valeria R. Fantin
- Subjects
Cancer Research ,Oncology - Abstract
The Glucocorticoid Receptor (GR) is a member of the superfamily of nuclear hormone receptors that is activated by human cortisol and synthetic glucocorticoids such as dexamethasone (Dex). Upon ligand binding, GR translocates to the nucleus and regulates the expression of a wide spectrum of genes involved in diverse biological processes, including inflammation, immunity, metabolism, cell cycle, and differentiation. Dysregulated cortisol levels are associated with poor prognosis, drug resistance, and increased cancer recurrence. Multiple studies have shown that GR inhibition reverses resistance to chemotherapy in cancers of epithelial origin including prostate, bladder, renal, ovarian, pancreatic, and triple negative breast cancer (TNBC). We have recently reported the discovery of ORIC-101, a potent GR antagonist with a unique cytochrome P450 inhibition profile that makes this compound particularly suitable for combination with taxanes such as paclitaxel (Rew Y et al, 2018). Consistent with previous reports, our data showed that activation of GR promoted growth of TNBC cells in 3D culture conditions and protected TNBC cells from paclitaxel. Treatment with ORIC-101 fully reversed these effects. To understand the molecular basis of the observed GR-mediated chemotherapy resistance, we set out to isolate the pool of TNBC cells that escaped from paclitaxel treatment in the presence of Dex. Molecular profiling of these “chemotherapy escapees” pointed to a number of glucocorticoid-regulated biological pathways, including basal stem cell lineage genes and mesenchymal markers, suggesting the acquisition of an EMT-like phenotype in chemo-resistant cells. In support of this finding, we found using ChIP-seq analysis that GR directly bound within the promoter/enhancer regions of well-established EMT genes such as SNAI2 and FN1, and regulated their expression in response to Dex treatment. Functionally, RNAi-mediated knockdown of SNAI2 partially restored sensitivity to paclitaxel, suggesting that the GR-driven EMT phenotype contributes to paclitaxel resistance in TNBC cells. Consistent with the in vitro observations, immunohistochemical analysis showed that GR activation upregulated the levels of both basal stem cell and mesenchymal markers in “chemotherapy escapees” from paclitaxel-treated TNBC xenografts. Importantly oral administration of ORIC-101 fully blocked these effects. Altogether, we found that activation of GR drove an EMT-like phenotype in TNBC cells in vitro and in vivo. ORIC-101 reversed these effects and sensitized TNBC cells to chemotherapy. Our findings thus provide mechanistic insights into the role of GR as a mediator of therapy resistance in TNBC. Clinical evaluation is being planned to assess the therapeutic potential of ORIC-101 in combination with standard-of-care chemotherapeutic agents. Citation Format: Haiying Zhou, Jessica Sun, Wayne Kong, Yosup Rew, Xiaohui Du, John Eksterowicz, Daqing Sun, Qiuping Ye, Omar Kabbarah, Valeria R. Fantin. ORIC-101 reverses a GR-driven EMT-like phenotype and sensitizes TNBC cells to chemotherapy [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2019; 2019 Mar 29-Apr 3; Atlanta, GA. Philadelphia (PA): AACR; Cancer Res 2019;79(13 Suppl):Abstract nr 3822.
- Published
- 2019
50. Discovery and optimization of benzenesulfonanilide derivatives as a novel class of 11β-HSD1 inhibitors
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Stefania Ursu, Daqing Sun, Yosup Rew, Juan C. Jaen, Jay P. Powers, Xiao He, Hua Tu, Dustin McMinn, and Michael DeGraffenreid
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Stereochemistry ,Clinical Biochemistry ,Drug Evaluation, Preclinical ,Molecular Conformation ,Pharmaceutical Science ,Crystallography, X-Ray ,Transfection ,Biochemistry ,Piperazines ,11β hsd1 inhibitors ,Structure-Activity Relationship ,11-beta-Hydroxysteroid Dehydrogenase Type 1 ,Drug Discovery ,Humans ,Anilides ,Enzyme Inhibitors ,Piperazine ,Molecular Biology ,Biological evaluation ,chemistry.chemical_classification ,Sulfonamides ,Aniline Compounds ,Chemistry ,Organic Chemistry ,Combinatorial chemistry ,Sulfonamide ,Enzyme Activation ,HEK293 Cells ,Molecular Medicine ,hormones, hormone substitutes, and hormone antagonists - Abstract
A novel series of benzenesulfonanilide derivatives of 11β-HSD1 inhibitors were identified via modification of the sulfonamide core of the arylsulfonylpiperazine lead structures. The synthesis, in vitro biological evaluation, and structure–activity relationship of these compounds are presented. Optimization of this series rapidly resulted in the discovery of compounds (S)-10 and (S)-23 (11β-HSD1 SPA IC50 = 1.8 and 1.4 nM, respectively).
- Published
- 2012
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