196 results on '"D., Gall"'
Search Results
2. Effects of Frequency on the Directional Auditory Sensitivity of Northern Saw-Whet Owls (Aegolius acadicus)
- Author
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Eileanor P. LaRocco, Megan D. Gall, and Glenn A. Proudfoot
- Subjects
Behavioral Neuroscience ,Developmental Neuroscience ,biology ,Aegolius ,Directional hearing ,Zoology ,Saw-whet owls ,biology.organism_classification ,Sensitivity (electronics) ,Predation - Abstract
Many animals use sound as a medium for detecting or locating potential prey items or predation threats. Northern saw-whet owls (Aegolius acadicus) are particularly interesting in this regard, as they primarily rely on sound for hunting in darkness, but are also subject to predation pressure from larger raptors. We hypothesized that these opposing tasks should favor sensitivity to low-frequency sounds arriving from many locations (potential predators) and high-frequency sounds below the animal (ground-dwelling prey items). Furthermore, based on the morphology of the saw-whet owl skull and the head-related transfer functions of related species, we expected that the magnitude of changes in sensitivity across spatial locations would be greater for higher frequencies than low frequencies (i.e., more “directional” at high frequencies). We used auditory-evoked potentials to investigate the frequency-specific directional sensitivity of Northern saw-whet owls to acoustic signals. We found some support for our hypothesis, with smaller-magnitude changes in sensitivity across spatial locations at lower frequencies and larger-magnitude changes at higher frequencies. In general, owls were most sensitive to sounds originating in front of and above their heads, but at 8 kHz there was also an area of high sensitivity below the animals. Our results suggest that the directional hearing of saw-whet owls should allow for both predator and prey detection.
- Published
- 2021
- Full Text
- View/download PDF
3. Safety, tolerability, and immunogenicity of the respiratory syncytial virus prefusion F subunit vaccine DS-Cav1: a phase 1, randomised, open-label, dose-escalation clinical trial
- Author
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Peifeng Chen, Anita Arthur, Kaitlyn M. Morabito, Kristin Leach, Xiaolin Wang, Grace L. Chen, Attila Nagy, Lauren A. Chang, Jon Cooper, Amy L. Chamberlain, Janel Holland-Linn, Olga Vasilenko, Alicia T. Widge, Shufeng Bai, Judith A Stein, LaSonji A. Holman, Cristina Carter, Iris Pittman, Deepika Gollapudi, Lisa A. Kueltzo, Colleen Fridley, Michelle C. Crank, Amritha Menon, William Whalen, Mridul Ghosh, Cynthia S. Hendel, Martha Nason, Amy Liu, Althaf Hussain, Laura Novik, Pernell Williams, Maria Burgos Florez, Robert T. Bailer, Thuy Nguyen, Brenda Larkin, Tracy J. Ruckwardt, Pamela Costner, Lam Le, Zhong Zhao, Elizabeth Carey, Vera Ivleva, Jennifer Walters, John R. Mascola, Jennifer Cunningham, Olga Trofymenko, Ya-chen Chang, Somia P. Hickman, Martin R. Gaudinski, Richard M. Schwartz, Slobodanka D. Manceva, Kevin Carlton, Barney S. Graham, Rahul Ragunathan, Jason G. D. Gall, Ana M. Ortega-Villa, Colin Tran, Sarah H. Plummer, Abidemi Ola, Ro Shauna S Rothwell, Ingelise J. Gordon, Mingzhong Chen, Jamie G. Saunders, Aba Mensima Eshun, Bob C. Lin, Azad Kumar, Nina M. Berkowitz, Xun Liu, Cora Trelles Cartagena, Emily Phung, Galina Yamshchikov, Joe Horwitz, Sarah O’Connell, Florence Kaltovich, Floreliz Mendoza, LaShawn Requilman, Man Chen, Preeti Apte, Christopher Lee, and Renunda Hicks
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Adult ,Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,Allergy ,Adolescent ,medicine.medical_treatment ,Phases of clinical research ,Antibodies, Viral ,Article ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Double-Blind Method ,Internal medicine ,Respiratory Syncytial Virus Vaccines ,medicine ,Humans ,030212 general & internal medicine ,Adverse effect ,business.industry ,Immunogenicity ,Infant ,Middle Aged ,medicine.disease ,Antibodies, Neutralizing ,Respiratory Syncytial Viruses ,Clinical trial ,Vaccination ,030228 respiratory system ,Tolerability ,Vaccines, Subunit ,business ,Adjuvant - Abstract
Multiple active vaccination approaches have proven ineffective in reducing the substantial morbidity and mortality caused by respiratory syncytial virus (RSV) in infants and older adults (aged ≥65 years). A vaccine conferring a substantial and sustainable boost in neutralising activity is required to protect against severe RSV disease. To that end, we evaluated the safety and immunogenicity of DS-Cav1, a prefusion F subunit vaccine.In this randomised, open-label, phase 1 clinical trial, the stabilised prefusion F vaccine DS-Cav1 was evaluated for dose, safety, tolerability, and immunogenicity in healthy adults aged 18-50 years at a single US site. Participants were assigned to receive escalating doses of either 50 μg, 150 μg, or 500 μg DS-Cav1 at weeks 0 and 12, and were randomly allocated in a 1:1 ratio within each dose group to receive the vaccine with or without aluminium hydroxide (AlOH) adjuvant. After 71 participants had been randomised, the protocol was amended to allow some participants to receive a single vaccination at week 0. The primary objectives evaluated the safety and tolerability at every dose within 28 days following each injection. Neutralising activity and RSV F-binding antibodies were evaluated from week 0 to week 44 as secondary and exploratory objectives. Safety was assessed in all participants who received at least one vaccine dose; secondary and exploratory immunogenicity analysis included all participants with available data at a given visit. The trial is registered with ClinicalTrials.gov, NCT03049488, and is complete and no longer recruiting.Between Feb 21, 2017, and Nov 29, 2018, 244 participants were screened for eligibility and 95 were enrolled to receive DS-Cav1 at the 50 μg (n=30, of which n=15 with AlOH), 150 μg (n=35, of which n=15 with AlOH), or 500 μg (n=30, of which n=15 with AlOH) doses. DS-Cav1 was safe and well tolerated and no serious vaccine-associated adverse events deemed related to the vaccine were identified. DS-Cav1 vaccination elicited robust neutralising activity and binding antibodies by 4 weeks after a single vaccination (p0·0001 for F-binding and neutralising antibodies). In analyses of exploratory endpoints at week 44, pre-F-binding IgG and neutralising activity were significantly increased compared with baseline in all groups. At week 44, RSV A neutralising activity was 3·1 fold above baseline in the 50 μg group, 3·8 fold in the 150 μg group, and 4·5 fold in the 500 μg group (p0·0001). RSV B neutralising activity was 2·8 fold above baseline in the 50 μg group, 3·4 fold in the 150 μg group, and 3·7 fold in the 500 μg group (p0·0001). Pre-F-binding IgG remained significantly 3·2 fold above baseline in the 50 μg group, 3·4 fold in the 150 μg group, and 4·0 fold in the 500 μg group (p0·0001). Pre-F-binding serum IgA remained 4·1 fold above baseline in the 50 μg group, 4·3 fold in the 150 μg group, and 4·8 fold in the 500 μg group (p0·0001). Although a higher vaccine dose or second immunisation elicited a transient advantage compared with lower doses or a single immunisation, neither significantly impacted long-term neutralisation. There was no long-term effect of dose, number of vaccinations, or adjuvant on neutralising activity.In this phase 1 study, DS-Cav1 vaccination was safe and well tolerated. DS-Cav1 vaccination elicited a robust boost in RSV F-specific antibodies and neutralising activity that was sustained above baseline for at least 44 weeks. A single low-dose of pre-F immunisation of antigen-experienced individuals might confer protection that extends throughout an entire RSV season.The National Institutes of Allergy and Infectious Diseases.
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- 2021
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4. Shared Operation of a Barrage Jammer and Reference Signal Sources for Determining Ground-Based Radio Transmitters Operating via Geostationary Relay Satellites
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R. D. Gall
- Subjects
reference signal source ,TK7800-8360 ,Computer science ,business.industry ,010401 analytical chemistry ,Transmitter ,Electrical engineering ,020206 networking & telecommunications ,02 engineering and technology ,positioning determining ,01 natural sciences ,Signal ,reference station ,0104 chemical sciences ,law.invention ,geolocation ,Relay ,law ,barrage jammer ,tdoa-tdoa method ,0202 electrical engineering, electronic engineering, information engineering ,Geostationary orbit ,geostationary relay satellite ,Electronics ,business - Abstract
Introduction. There are incidences of jamming the users of satellite communication systems, who apply e.g. geostationary relay satellites, and the illegal use of such satellite resources. These actions can be both intentional and unintentional, and, among other things, be caused by non-compliance with electromagnetic compatibility standards on part of other users of satellite communication systems. For a prompt and high -quality response of radio monitoring services and satellite operators to these illegal actions, it seems urgent to develop methods for accurate determination of the geolocation of radio emission sources.Aim. To develop a method for improving the accuracy of determining the coordinates of ground-based radio emission sources operating via geostationary relay satellites based on shared operation of a barrage jammer and reference signal sources.Materials and methods. The research was conducted using the statistical theory of radio engineering systems, the theory of digital signal processing and the method of simulation.Results. A method was developed for improving the geolocation accuracy of ground-based radio emission sources operating via geostationary relay satellites based on shared operation of a barrage jammer and reference signal sources. A method for resolving ambiguity regarding the true correlation peak of a reference source signal using a signal from a barrage jammer was described. An expression was obtained for the probability of a correct solution when resolving such ambiguity. As a result, the estimates of geolocation accuracy obtained using the developed method were compared with those obtained by a conventional method relying on the usage of 3 different reference stations.Conclusions. The method proposed in this paper makes it possible to achieve a relatively high accuracy when determining the geolocation of ground-based radio emission sources in the Earth’s regions of interest, at the same time as involving no organizational and financial costs for the installation of a large number of reference stations.
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- 2021
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5. Author response for 'Analytical characterization of broadly neutralizing antibody <scp>CAP256LS</scp> heavy chain clipping during manufacturing development'
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null Deepika Gollapudi, null Erwin Rosales‐Zavala, null Vera B. Ivleva, null Yanhong Yang, null Yile Li, null Sarah O'Connell, null Nicole A. Doria‐Rose, null Aakash Patel, null Daniel Blackstock, null Daniel B. Gowetski, null Kevin Carlton, null Jason G. D. Gall, and null Q. Paula Lei
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- 2022
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6. Analytical characterization of broadly neutralizing antibody CAP256LS heavy chain clipping during manufacturing development
- Author
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Deepika Gollapudi, Erwin Rosales‐Zavala, Vera B. Ivleva, Yanhong Yang, Yile Li, Sarah O'Connell, Nicole A. Doria‐Rose, Aakash Patel, Daniel Blackstock, Daniel B. Gowetski, Kevin Carlton, Jason G. D. Gall, and Q. Paula Lei
- Subjects
HIV-1 ,Humans ,Antibodies, Monoclonal ,HIV Antibodies ,Antibodies, Neutralizing ,Broadly Neutralizing Antibodies ,Biotechnology - Abstract
Broadly neutralizing antibody (bNAb) CAP256-VRC26.25 (abbreviated CAP256LS), a human IgGI monoclonal antibody targeting the V1V2 site of the HIV-1 envelope, has demonstrated high therapeutic potential as a broadly neutralizing monoclonal antibody against HIV-1. During the process development, a heavy chain fragmentation (clipping) was observed, that led to a relative potency reduction. In this report, we highlighted a series of process and product mitigation strategies deployed to advance this product. We have detailed how analytical characterization tools, especially the microchip reduced capillary gel electrophoresis (CGE-SDS), played a pivotal role in identifying the development issues and in providing measurements to guide implementation of mitigation strategies.
- Published
- 2022
7. Accuracy of Positioning of Ground Sources Using Geostationary Repeaters
- Author
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R. D. Gall
- Subjects
TK7800-8360 ,Computer science ,Real-time computing ,02 engineering and technology ,01 natural sciences ,Signal ,law.invention ,Relay ,law ,0202 electrical engineering, electronic engineering, information engineering ,coordinate measurement ,010401 analytical chemistry ,Bandwidth (signal processing) ,tdoa-fdoa method ,020206 networking & telecommunications ,Multilateration ,0104 chemical sciences ,Geolocation ,geolocation ,fdoa-fdoa method ,positioning ,geostationary satellite ,tdoa-tdoa method ,FDOA ,Geostationary orbit ,Satellite ,Electronics - Abstract
Introduction. Currently, there is a significant increase in the number of relay satellites in geostationary orbit. However, frequent incidents of illegal use of the satellites frequency resource, as well as unintentional and deliberate interference with other users are fixed. In this regard, it becomes necessary to evaluate accuracy and applicability of various methods for determining the location of sources of illegal and interfering radio emission with different signal parameters and with different levels of uncertainty for relay satellite coordinates and velocities.Aim. To study and to evaluate the accuracy of methods of geolocation of radio emission sources operating through geostationary relay satellites, with different signal parameters and with different levels of uncertainty for relay satellite coordinates and velocities.Materials and methods. Imitation modeling and the theory of digital signal processing were used.Results. Factors influencing the accuracy of the estimation of TDOA and FDOA parameters when determining the position of radio emission sources, which operate via relay satellites located in geostationary orbit, were considered. As a result of simulation, the estimate of the accuracy of the considered geolocation methods was obtained. It depends on the bandwidth of radio emission source signal, on the recording duration and on the level of a priori uncertainty relatively the relay satellites coordinates and velocities. Recommendations for the application of the considered methods in various conditions were formulated.Conclusions. Conclusions and recommendations formulated as a result of the study, will allow one to choose the most appropriate geolocation method to improve the accuracy of radio emission sources locating depending on conditions and signal parameters.
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- 2020
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8. Mechanical and electronic properties of transition metal hexa-nitrides in hexagonal structure from density functional theory calculations
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S.R. Kandel, B.B. Dumre, D. Gall, and S.V. Khare
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Computational Mathematics ,General Computer Science ,Mechanics of Materials ,General Physics and Astronomy ,General Materials Science ,General Chemistry - Published
- 2023
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9. Investigation of hardness in transition metal hexa-nitrides in cubic structure: A first-principles study
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S.R. Kandel, B.B. Dumre, D. Gall, and S.V. Khare
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General Materials Science ,General Chemistry ,Condensed Matter Physics - Published
- 2022
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10. The paradox of hearing at the lek: auditory sensitivity increases after breeding in female gray treefrogs (Hyla chrysoscelis)
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Megan D. Gall, Alexander T. Baugh, and Mark A. Bee
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Amphibian ,medicine.medical_specialty ,Physiology ,Oviposition ,030310 physiology ,Receptivity ,Audiology ,Hyla chrysoscelis ,Reproductive cycle ,03 medical and health sciences ,Behavioral Neuroscience ,chemistry.chemical_compound ,0302 clinical medicine ,Corticosterone ,biology.animal ,Evoked Potentials, Auditory, Brain Stem ,otorhinolaryngologic diseases ,medicine ,Animals ,Basilar papilla ,Ecology, Evolution, Behavior and Systematics ,0303 health sciences ,biology ,Auditory Threshold ,biology.organism_classification ,Attraction ,Auditory brainstem response ,chemistry ,Female ,Animal Science and Zoology ,sense organs ,Anura ,030217 neurology & neurosurgery - Abstract
Both behavioral receptivity and neural sensitivity to acoustic mate attraction signals vary across the reproductive cycle, particularly in seasonally breeding animals. Across a variety of taxa receptivity to signals increases, as does peripheral auditory sensitivity, as females transition from a non-breeding to breeding condition. We recently documented decreases in receptivity to acoustic mate attraction signals and circulating hormone levels, but an increase in peripheral auditory sensitivity to call-like stimuli following oviposition in Cope's gray treefrogs (Hyla chrysoscelis). However, it is not known if changes in auditory sensitivity are confined to the frequency range of calls, or if they result from more generalized changes in the auditory periphery. Here, we used auditory brainstem responses (ABRs) to evaluate peripheral frequency sensitivity in female Cope's gray treefrogs before and after oviposition. We found lower ABR thresholds, greater ABR amplitudes, and shorter ABR latencies following oviposition. Changes were most pronounced and consistent at lower frequencies associated with the amphibian papilla, but were also detectable at higher frequencies corresponding to the tuning of the basilar papilla. Furthermore, only ABR latencies were correlated with circulating steroid hormones (testosterone). Changes in peripheral processing may result from changes in metabolic function or sensorineural adaptation to chorus noise.
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- 2019
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11. Climate impact on fluvial-lake system evolution, Eocene Green River Formation, Uinta Basin, Utah, USA
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Ellen M. Rosencrans, L.C. Toms, M.J. Rosenberg, Lauren P. Birgenheier, M. D. Vanden Berg, Piret Plink-Björklund, Ryan D. Gall, and J. Morris
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010504 meteorology & atmospheric sciences ,Climate impact ,Earth science ,Fluvial ,Geology ,Structural basin ,010502 geochemistry & geophysics ,Green River Formation ,01 natural sciences ,0105 earth and related environmental sciences - Abstract
In light of a modern understanding of early Eocene greenhouse climate fluctuations and new highly seasonal fluvial system faces models, the role of climate in the evolution of one classically-cited continental, terminal lake system is re-examined. Detailed stratigraphic description and elemental abundance data from fifteen cores and seven outcrop regions of the Green River Formation were used to construct a ∼150 km cross section across the Uinta Basin, Utah, USA. Lake Uinta in the Uinta Basin is divided into five lake phases: (1) post-Paleocene Eocene Thermal Maximum, (2) peak Eocene hyperthermal, (3) waning hyperthermal, Early Eocene Climatic Optimum (EECO), (4) post-hyperthermal, and (5) post-EECO regimes, based primarily on climatically driven changes in fluvial style in combination with sedimentary indicators of lacustrine carbonate deposition, organic matter preservation, salinity, and lake depth. Basinwide siliciclastic dominated intervals were deposited by highly seasonal fluvial systems and record negative organic carbon isotope excursions associated with early Eocene abrupt, transient global warming (hyperthermal) events. Carbonate dominated or organic rich intervals record stable, less seasonal climate periods between hyperthermals, with lower siliciclastic sediment supply allowing the development of carbonate and organic matter preservation. The stratigraphic progression from alternating organic rich and lean zones to the overlying organic rich Mahogany and R8 zones represents the global transition out of the pulsed early Eocene hyperthermal climate regime to a time of sediment starvation and lake stratification, sequestering sedimentary organic carbon. This study provides a novel approach to terrestrial paleoclimate reconstruction that relies largely on unique sedimentary indicators and secondarily on isotopic proxy records within the context of a large basin-wide sedimentologic and stratigraphic data set, thus setting the stage for future detailed geochemical terrestrial paleoclimate proxy development.
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- 2019
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12. P–035 Mathematical model of the signaling cascade during mouse sperm capacitation
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D Gall, P Lybaert, and B. D Prelle
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Reproductive Medicine ,Capacitation ,Cascade ,Chemistry ,Rehabilitation ,Obstetrics and Gynecology ,Sperm ,Cell biology - Abstract
Study question Modeling the feedback loop controlling sperm capacitation to study the reversibility/irreversibility of the process Summary answer We demonstrate the existence of a feedback loop between pH increase and hyperpolarization, inducing bistability and possibly the reversibility of the capacitation process. What is known already The process of mammalian capacitation does need an influx of calcium ions through the transmembrane Catsper Channel Complex. This plasmic membrane channel, which is activated by an increase in either the intracellular pH or the membrane potential, is a sperm-specific protein that is localized in the sperm flagella. Two other sperm specific transporters, sNHE and SLO3, found in the flagella, have been shown to control protons influx and transmembrane voltage respectively, and could work together in a feedback loop keeping the sperm in a high pH state with hyperpolarized membrane. Study design, size, duration Mathematical model Participants/materials, setting, methods Not applicable Main results and the role of chance The results given by this minimal theoretical model are robust as the predicted qualitative behavior can accommodate to a wide span of physiological parameters variations. Limitations, reasons for caution The model and its parameters are mainly based on in vitro results of the literature, so that the in vivo implications should be inferred carefully. Wider implications of the findings: The possible reversibility of the capacitation process could have major clinical implications, relevant for the optimization of sperm preparation in assisted reproductive techniques and cryopreservation procedures. Trial registration number Not applicable
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- 2021
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13. Effects of Frequency on the Directional Auditory Sensitivity of Northern Saw-Whet Owls (Aegolius acadicus)
- Author
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Eileanor P, LaRocco, Glenn A, Proudfoot, and Megan D, Gall
- Subjects
Hearing ,Predatory Behavior ,Animals ,Strigiformes - Abstract
Many animals use sound as a medium for detecting or locating potential prey items or predation threats. Northern saw-whet owls (Aegolius acadicus) are particularly interesting in this regard, as they primarily rely on sound for hunting in darkness, but are also subject to predation pressure from larger raptors. We hypothesized that these opposing tasks should favor sensitivity to low-frequency sounds arriving from many locations (potential predators) and high-frequency sounds below the animal (ground-dwelling prey items). Furthermore, based on the morphology of the saw-whet owl skull and the head-related transfer functions of related species, we expected that the magnitude of changes in sensitivity across spatial locations would be greater for higher frequencies than low frequencies (i.e., more "directional" at high frequencies). We used auditory-evoked potentials to investigate the frequency-specific directional sensitivity of Northern saw-whet owls to acoustic signals. We found some support for our hypothesis, with smaller-magnitude changes in sensitivity across spatial locations at lower frequencies and larger-magnitude changes at higher frequencies. In general, owls were most sensitive to sounds originating in front of and above their heads, but at 8 kHz there was also an area of high sensitivity below the animals. Our results suggest that the directional hearing of saw-whet owls should allow for both predator and prey detection.
- Published
- 2021
14. Social Communication across Reproductive Boundaries: Hormones and the Auditory Periphery of Songbirds and Frogs
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Alexander T. Baugh, Mark A. Bee, Jeffrey R. Lucas, and Megan D. Gall
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Central nervous system ,Sensory system ,Plant Science ,Biology ,Songbirds ,03 medical and health sciences ,Sexual Behavior, Animal ,0302 clinical medicine ,medicine ,Neural control ,Auditory system ,Animals ,0501 psychology and cognitive sciences ,050102 behavioral science & comparative psychology ,Social communication ,Reproduction ,05 social sciences ,Hormones ,medicine.anatomical_structure ,Time course ,Animal Science and Zoology ,Anura ,Vocalization, Animal ,Neuroscience ,030217 neurology & neurosurgery ,Hormone - Abstract
Synopsis Most animals experience reproductive transitions in their lives; for example, reaching reproductive maturity or cycling in and out of breeding condition. Some reproductive transitions are abrupt, while others are more gradual. In most cases, changes in communication between the sexes follow the time course of these reproductive transitions and are typically thought to be coordinated by steroid hormones. We know a great deal about hormonal control of communication behaviors in birds and frogs, as well as the central neural control of these behaviors. There has also been significant interest in the effects of steroid hormones on central nervous system structures that control both the production and reception of communication signals associated with reproductive behaviors. However, peripheral sensory structures have typically received less attention, although there has been growing interest in recent years. It is becoming clear that peripheral sensory systems play an important role in reproductive communication, are plastic across reproductive conditions, and, in some cases, this plasticity may be mediated by steroid hormones. In this article, we discuss recent evidence for the role of peripheral auditory structures in reproductive communication in birds and frogs, the plasticity of the peripheral auditory system, and the role of steroid hormones in mediating the effects of the peripheral auditory system on reproductive communication. We focus on both seasonal and acute reproductive transitions, introduce new data on the role of hormones in modulating seasonal patterns, and make recommendations for future work.
- Published
- 2021
15. Moderately elevated glucocorticoids increase mate choosiness but do not affect sexual proceptivity or preferences in female gray treefrogs
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Alexander T. Baugh, Stewart C. Silver, Mark A. Bee, and Megan D. Gall
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biology ,Endocrine and Autonomic Systems ,Reproduction ,Zoology ,Proceptive phase ,Context (language use) ,Mating Preference, Animal ,Hyla chrysoscelis ,biology.organism_classification ,Affect (psychology) ,Intraspecific competition ,Behavioral Neuroscience ,chemistry.chemical_compound ,Sexual Behavior, Animal ,Endocrinology ,chemistry ,Mate choice ,Corticosterone ,Animals ,Female ,Anura ,Glucocorticoids ,Moderate-Dose - Abstract
Glucocorticoids (GCs) are rarely studied in the context of female mate choice, despite the expression of receptors for these products in sexual, sensory and decision-making brain areas. Here we investigated the effects of GC concentrations on three aspects of female sexual behavior in breeding Cope's gray treefrogs (Hyla chrysoscelis): proceptivity—a measure of sexual motivation, intraspecific mate preferences, and mate choosiness. To our knowledge this is the first experimental study on the endocrine basis of mate choosiness. We predicted that mate choosiness—forfeiting an initial mate preference to pursue a suddenly more attractive mate—would be particularly impacted by elevated GCs with moderate GC levels associated with greater choosiness. We found support for this predicted inverted-U relationship. Females in the control group (no injection) showed no change in choosiness across timepoints. In contrast, females in the vehicle, Low (20 ng g−1) and High (180 ng g−1) corticosterone groups exhibited a nominal decline in choosiness after injection, suggesting that the experience of injection has little or perhaps slightly suppressive effects on female choosiness. Females in the moderate dose group (60 ng g−1), however, exhibited a significant increase (>100%) in choosiness. Further, we found no effect of elevated GCs on sexual proceptivity or the species-typical preference for longer calls. These findings may reflect a buffering of primary sensory areas in the brain against elevated GCs. The recruitment of other cognitive processes during active decision-making, however, may facilitate GC modulation of mate choosiness, thereby promoting tactical plasticity at this critical life history juncture.
- Published
- 2020
16. Hearing in 3D: Directional Auditory Sensitivity of Northern Saw-Whet Owls (Aegolius acadicus)
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Megan de Koning, Megan D. Gall, Glenn A. Proudfoot, and Julia R. Beatini
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0106 biological sciences ,Sound localization ,Masking (art) ,Aegolius ,Acoustics ,Plant Science ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Median plane ,0302 clinical medicine ,Hearing ,Animals ,Sound Localization ,Environmental noise ,Wing ,biology ,biology.organism_classification ,Strigiformes ,Noise ,Beak ,Auditory Perception ,Animal Science and Zoology ,Head ,030217 neurology & neurosurgery ,Geology - Abstract
Northern saw-whet owls (Aegolius acadicus) are nocturnal predators that are able to acoustically localize prey with great accuracy; an ability that is attributed to their unique asymmetrical ear structure. While a great deal of research has focused on open loop sound localization prior to flight in owls (primarily barn owls), directional sensitivity of the ears may also be important in locating moving prey on the wing. Furthermore, directionally sensitive ears may also reduce the effects of masking noise, either from the owls’ wings during flight or environmental noise (e.g., wind and leaf rustling), by enhancing spatial segregation of target sounds and noise sources. Here, we investigated auditory processing of Northern saw-whet owls in three-dimensional space using auditory evoked potentials (AEPs). We simultaneously evoked auditory responses in two channels (right and left ear) with broadband clicks from a sound source that could be manipulated in space. Responses were evoked from 66 spatial locations, separated by 30° increments in both azimuth and elevation. We found that Northern saw-whet owls had increased sensitivity to sound sources directly in front of and above their beaks and decreased sensitivity to sound sources below and behind their heads. The spatial region of highest sensitivity extends from the lower beak to the crown of the head and 30° left or right of the median plane, dropping off beyond those margins. Directional sensitivity is undoubtedly useful during foraging and predator evasion, and may also reduce the effect of masking noise from the wings during flight due to the spatial segregation of the noise and targets of interest.
- Published
- 2020
17. Highly Seasonal and Perennial Fluvial Facies: Implications For Climatic Control On the Douglas Creek and Parachute Creek Members, Green River Formation, Southeastern Uinta Basin, Utah, U.S.A
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Michael D. Vanden Berg, Lauren P. Birgenheier, and Ryan D. Gall
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010504 meteorology & atmospheric sciences ,Outcrop ,Fluvial ,Geology ,Structural basin ,010502 geochemistry & geophysics ,01 natural sciences ,Sedimentary structures ,Sedimentary depositional environment ,Paleontology ,Siliciclastic ,Sedimentary rock ,Green River Formation ,Geomorphology ,0105 earth and related environmental sciences - Abstract
The early to middle Eocene Green River Formation consists of continental strata deposited in Laramide ponded basins in Utah, Colorado, and Wyoming. This study (1) documents fluvial and lacustrine strata from the Douglas Creek and Parachute Creek members of the middle Green River Formation, southeastern Uinta Basin, Utah, and (2) uses new interpretations of the link between climate and fluvial sedimentary expression to interpret the terrestrial evolution of early Eocene climate. The stratigraphy was analyzed via outcrops along a 10 km transect in Main Canyon on the Tavaputs Plateau, and is divided into three distinct, stratigraphically separated depositional settings: (1) the lowermost Interval 1 is dominated by amalgamated sandstone channels that contain 70–100% upper-flow-regime sedimentary structures. The channels are interpreted to represent fluvial deposits controlled by a highly seasonal climate, where most deposition was limited to seasonal flooding events. (2) Interval 2 is dominated by alternating siliciclastic and carbonate lacustrine deposits, interpreted as local pulsed fluvial siliciclastic input into shallow Lake Uinta, and periods of fluvial quiescence represented by littoral carbonate deposition. (3) The uppermost Interval 3 is dominated by erosionally-based, trough cross bedded sandstone channels interbedded with littoral lacustrine and deltaic deposits. The Interval 3 sandstone channels are interpreted as perennial fluvial deposits with relatively little variation in annual discharge, akin to modern humid-temperate fluvial systems. The stratigraphic transition from seasonally controlled (Interval 1) to perennial (Interval 3) fluvial deposits is interpreted to represent a fundamental shift in Eocene climate, from the peak hyperthermal regime of the Early Eocene Climatic Optimum (EECO) to a more stable post-EECO climate.
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- 2017
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18. A numerical and experimental study of the effects of dynamic roughness on laminar leading edge separation
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Peter D. Gall
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Leading edge ,Materials science ,business.industry ,Separation (aeronautics) ,Laminar sublayer ,Mechanical engineering ,Laminar flow ,Surface finish ,Aerospace ,business - Published
- 2019
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19. Effects of presentation rate and onset time on auditory brainstem responses in Northern saw-whet owls (Aegolius acadicus)
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Julia R. Beatini, Megan D. Gall, and Glenn A. Proudfoot
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0106 biological sciences ,0301 basic medicine ,medicine.medical_specialty ,Acoustics and Ultrasonics ,Aegolius ,Bioacoustics ,Common method ,Biology ,Stimulus (physiology) ,Audiology ,010603 evolutionary biology ,01 natural sciences ,Neural recruitment ,03 medical and health sciences ,Arts and Humanities (miscellaneous) ,otorhinolaryngologic diseases ,medicine ,Evoked Potentials, Auditory, Brain Stem ,Reaction Time ,Animals ,Saw-whet owls ,Rapid rate ,biology.organism_classification ,Strigiformes ,Adaptation, Physiological ,030104 developmental biology ,Predatory Behavior ,Auditory Perception ,sense organs ,Brainstem ,Brain Stem - Abstract
Monitoring auditory brainstem responses (ABRs) is a common method of assessing auditory processing in non-model species. Although ABRs are widely used to compare auditory abilities across taxa, the extent to which different features of acoustic stimuli affect the ABR is largely unknown in most non-mammalian species. The authors investigated the effects of varying presentation rate and onset time to determine how different features of acoustic stimuli influence the ABR in Northern saw-whet owls (Aegolius acadicus), a species known for their unique auditory adaptations and hunting abilities. At presentation rates ranging from 21.1 to 51.1 s−1, there were no differences in the size or synchrony of ABRs, suggesting that stimuli can be presented at a relatively rapid rate to maximize the number of observations recorded for analysis. While increasing onset time was associated with a decrement in response size and synchrony, tonebursts with 1 ms onset times produced overgeneralized neural responses as a result of spectral splatter. This suggests that 2 to 3 ms onset times may balance the trade-off between response synchrony and frequency specificity when comparing relative neural recruitment across frequencies. These findings highlight the importance of considering stimulus parameters when interpreting ABR data.Monitoring auditory brainstem responses (ABRs) is a common method of assessing auditory processing in non-model species. Although ABRs are widely used to compare auditory abilities across taxa, the extent to which different features of acoustic stimuli affect the ABR is largely unknown in most non-mammalian species. The authors investigated the effects of varying presentation rate and onset time to determine how different features of acoustic stimuli influence the ABR in Northern saw-whet owls (Aegolius acadicus), a species known for their unique auditory adaptations and hunting abilities. At presentation rates ranging from 21.1 to 51.1 s−1, there were no differences in the size or synchrony of ABRs, suggesting that stimuli can be presented at a relatively rapid rate to maximize the number of observations recorded for analysis. While increasing onset time was associated with a decrement in response size and synchrony, tonebursts with 1 ms onset times produced overgeneralized neural responses as a result o...
- Published
- 2019
20. Anthropogenic noise reduces approach of Black-capped Chickadee (Poecile atricapillus) and Tufted Titmouse (Baeolophus bicolor) to Tufted Titmouse mobbing calls
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Megan D. Gall and Jacob Damsky
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0106 biological sciences ,Baeolophus ,biology ,Noise pollution ,Ecology ,05 social sciences ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Mobbing (animal behavior) ,Predation ,Black-capped chickadee ,Noise ,Behavioral response ,Poecile ,0501 psychology and cognitive sciences ,Animal Science and Zoology ,050102 behavioral science & comparative psychology ,Ecology, Evolution, Behavior and Systematics - Abstract
Successful communication between a sender and a receiver is critical for coordinating behaviors between organisms. This coordination can be disturbed by anthropogenic noise, which has been shown to alter vocal signal production in many species of birds. In addition to affecting senders, noise may also alter reception and behavioral response. Here we investigated the effects of anthropogenic noise on behavioral response to acoustic signals in mixed-species flocks of songbirds. We used playbacks of Tufted Titmouse (Baeolophus bicolor) chick-a-dee calls and local anthropogenic noise to determine how receivers respond to calls with and without added noise. We found that the addition of noise caused a significant decrease of ∼80% in the number of birds that approached the speaker during a chick-a-dee call playback; however, we saw no effect of noise on feeding behavior. Our data support the hypothesis that anthropogenic noise can alter behavioral responses to chick-a-dee calls. This finding is of part...
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- 2017
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21. Safety and pharmacokinetics of broadly neutralising human monoclonal antibody VRC07-523LS in healthy adults: a phase 1 dose-escalation clinical trial
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Robert T. Bailer, Maria Burgos Florez, Lucio Gama, Sung-Youl Ko, Zonghui Hu, Cynthia S. Hendel, Ro Shauna S Rothwell, Amarendra Pegu, Lily Zhang, Brenda Larkin, Katherine V. Houser, Jennifer Cunningham, Martin R. Gaudinski, Olga Vasilenko, Sandra Sitar, Julie E. Ledgerwood, Nicole A. Doria-Rose, Kathy Zephir, Preeti Apte, KC Cheng, William Whalen, Renunda Hicks, Richard A. Koup, Margarita M. Gomez Lorenzo, Floreliz Mendoza, Xiaolin Wang, Cristina Carter, LaSonji A. Holman, Young Do Kwon, Frank J. Arnold, Hope DeCederfelt, Grace L. Chen, Aryan M. Namboodiri, Peter D. Kwong, Kevin Carlton, Adrian B. McDermott, Joseph P. Casazza, Bob C. Lin, Nina M. Berkowitz, Nilusha Jayasinghe, Laura Novik, Catina R. Boyd, Edmund V. Capparelli, Carol Levinson, Galina Yamshchikov, Cora Trelles Cartagena, Carolyn M. Laurencot, Jason G. D. Gall, Michelle Conan-Cibotti, Sarah H. Plummer, Yunda Huang, Abidemi Ola, Pamela Costner, Ingelise J. Gordon, Janardan P. Pandey, Richard M. Schwartz, Judy Stein, Pernell Williams, Florence Kaltovich, Jamie G. Saunders, Iris Pittman, Milalynn Victorino, John R. Mascola, and Barney S. Graham
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0301 basic medicine ,Adult ,Male ,medicine.medical_specialty ,Epidemiology ,Immunology ,Phases of clinical research ,HIV Infections ,Administration, Cutaneous ,law.invention ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Randomized controlled trial ,law ,Virology ,Internal medicine ,medicine ,Humans ,Medical history ,030212 general & internal medicine ,Adverse effect ,Reactogenicity ,business.industry ,Antibodies, Monoclonal ,Middle Aged ,030112 virology ,Antibodies, Neutralizing ,Healthy Volunteers ,Clinical trial ,Infectious Diseases ,Tolerability ,Chills ,Administration, Intravenous ,Female ,medicine.symptom ,business - Abstract
Summary Background Human monoclonal antibodies that potently and broadly neutralise HIV-1 are under development to prevent and treat HIV-1 infection. In this phase 1 clinical trial we aimed to determine the safety, tolerability, and pharmacokinetic profile of the broadly neutralising monoclonal antibody VRC07-523LS, an engineered variant of VRC01 that targets the CD4 binding site of the HIV-1 envelope protein. Methods This phase 1, open-label, dose-escalation clinical trial was done at the National Institutes of Health Clinical Center in Bethesda, MD, USA. Individuals were recruited from the greater Washington, DC, area by IRB-approved written and electronic media. We enrolled healthy, HIV-1-negative adults aged 18–50 years. Inclusion criteria were good general health, measured through clinical laboratory tests, medical history, and physical examination. Participants self-selected into one of seven open groups during enrolment without randomisation. Four groups received a single intravenous dose of 1, 5, 20, or 40 mg/kg of VRC07-523LS, and one group received a single 5 mg/kg subcutaneous dose. Two groups received three doses of either 20 mg/kg intravenous VRC07-523LS, or 5 mg/kg subcutaneous VRC07-523LS at 12-week intervals. The primary outcome was the safety and tolerability of VRC07-523LS, assessed by dose, route, and number of administrations. This study is registered with ClinicalTrials.gov, NCT03015181. Findings Between Feb 21, 2017, and September 13, 2017, we enrolled 26 participants, including 11 (42%) men and 15 (58%) women. Two (8%) participants withdrew from the study early: one participant in group 1 enrolled in the study but never received VRC07-523LS, and one participant in group 6 chose to withdraw after a single administration. One (4%) participant in group 7 received only one of the three scheduled administrations. 17 participants received intravenous administrations and 8 participants received subcutaneous administrations. VRC07-523LS was safe and well tolerated, we observed no serious adverse events or dose-limiting toxic effects. All reported local and systemic reactogenicity was mild to moderate in severity. The most commonly reported symptoms following intravenous administration were malaise or myalgia in three (18%) participants and headache or chills in two (12%) participants. The most commonly reported symptoms following subcutaneous administration were pain and tenderness in four participants (50%) and malaise or headache in three (38%) participants. Interpretation Safe and well tolerated, VRC07-523LS is a strong and practical candidate for inclusion in HIV-1 prevention and therapeutic strategies. The results from this trial also indicate that an HIV-1 broadly neutralising monoclonal antibody engineered for improved pharmacokinetic and neutralisation properties can be safe for clinical use. Funding National Institutes of Health.
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- 2019
22. Effect of a Chikungunya Virus–Like Particle Vaccine on Safety and Tolerability Outcomes
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Clemente Diaz, Michelle Conan-Cibotti, Josephine H. Cox, Kimberly A. Dowd, Florence Kaltovich, John R. Mascola, Ingelise J. Gordon, Rebecca Lampley, Robert T. Bailer, Brittanie Brockett, Barney S. Graham, Doug Haney, Jeanine May, David Gordon, Kevin Carlton, Theodore C. Pierson, Nicolas Rosario, Yeycy Donastorg, Nina M. Berkowitz, Jason G. D. Gall, Richard A. Koup, André Cabié, Jason Mendy, Brenda Larkin, Sarah H. Plummer, Cristina Carter, Allison Beck, Jean W. Pape, Mark O’Callahan, Bruno Hoen, Charla A. Andrews, Amy Bray, Grace L. Chen, Julie E. Ledgerwood, Richard M. Schwartz, and Emily E. Coates
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Adult ,Male ,medicine.medical_specialty ,Adolescent ,Population ,Injections, Intramuscular ,01 natural sciences ,law.invention ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Double-Blind Method ,Randomized controlled trial ,Neutralization Tests ,law ,Internal medicine ,medicine ,Humans ,Vaccines, Virus-Like Particle ,030212 general & internal medicine ,0101 mathematics ,education ,Adverse effect ,education.field_of_study ,Reactogenicity ,business.industry ,010102 general mathematics ,Viral Vaccines ,General Medicine ,Middle Aged ,Antibodies, Neutralizing ,Clinical trial ,Vaccination ,Tolerability ,Chikungunya Fever ,Female ,business ,Chikungunya virus ,Martinique - Abstract
Importance Chikungunya virus (CHIKV) is a mosquito-borneAlphavirusprevalent worldwide. There are currently no licensed vaccines or therapies. Objective To evaluate the safety and tolerability of an investigational CHIKV virus–like particle (VLP) vaccine in endemic regions. Design, Setting, and Participants This was a randomized, placebo-controlled, double-blind, phase 2 clinical trial to assess the vaccine VRC-CHKVLP059-00-VP (CHIKV VLP). The trial was conducted at 6 outpatient clinical research sites located in Haiti, Dominican Republic, Martinique, Guadeloupe, and Puerto Rico. A total of 400 healthy adults aged 18 through 60 years were enrolled after meeting eligibility criteria. The first study enrollment occurred on November 18, 2015; the final study visit, March 6, 2018. Interventions Participants were randomized 1:1 to receive 2 intramuscular injections 28 days apart (20 µg, n = 201) or placebo (n = 199) and were followed up for 72 weeks. Main Outcomes and Measures The primary outcome was the safety (laboratory parameters, adverse events, and CHIKV infection) and tolerability (local and systemic reactogenicity) of the vaccine, and the secondary outcome was immune response by neutralization assay 4 weeks after second vaccination. Results Of the 400 randomized participants (mean age, 35 years; 199 [50%] women), 393 (98%) completed the primary safety analysis. All injections were well tolerated. Of the 16 serious adverse events unrelated to the study drugs, 4 (25%) occurred among 4 patients in the vaccine group and 12 (75%) occurred among 11 patients in the placebo group. Of the 16 mild to moderate unsolicited adverse events that were potentially related to the drug, 12 (75%) occurred among 8 patients in the vaccine group and 4 (25%) occurred among 3 patients in the placebo group. All potentially related adverse events resolved without clinical sequelae. At baseline, there was no significant difference between the effective concentration (EC50)—which is the dilution of sera that inhibits 50% infection in viral neutralization assay—geometric mean titers (GMTs) of neutralizing antibodies of the vaccine group (46; 95% CI, 34-63) and the placebo group (43; 95% CI, 32-57). Eight weeks following the first administration, the EC50 GMT in the vaccine group was 2005 (95% CI, 1680-2392) vs 43 (95% CI, 32-58;P Conclusions and Relevance Among healthy adults in a chikungunya endemic population, a virus-like particle vaccine compared with placebo demonstrated safety and tolerability. Phase 3 trials are needed to assess clinical efficacy. Trial Registration ClinicalTrials.gov Identifier:NCT02562482
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- 2020
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23. A proof of concept for structure-based vaccine design targeting RSV in humans
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Lisa A. Kueltzo, Vrc Study Team, Jonathan W. Cooper, Martin R. Gaudinski, Pamela Costner, Judith A Stein, Syed M. Moin, LaSonji A. Holman, Ingelise J. Gordon, Michelle C. Crank, Grace L. Chen, Lauren A. Chang, Azad Kumar, Nina M. Berkowitz, Juliane P. Hill, Jason S. McLellan, Kevin Carlton, Tracy J. Ruckwardt, Emily Phung, Anthony T. DiPiazza, Somia P. Hickman, Martha Nason, Julie E. Ledgerwood, Jason G. D. Gall, Peter D. Kwong, Galina Yamshchikov, John R. Mascola, Barney S. Graham, Man Chen, Richard M. Schwartz, Peifeng Chen, and Kaitlyn M. Morabito
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0301 basic medicine ,Adult ,Adolescent ,Protein subunit ,Respiratory Syncytial Virus Infections ,Biology ,Antibodies, Viral ,Virus ,Epitope ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Immunogenicity, Vaccine ,Respiratory Syncytial Virus Vaccines ,Humans ,030212 general & internal medicine ,chemistry.chemical_classification ,Multidisciplinary ,Immunogenicity ,Protein engineering ,Middle Aged ,Virology ,Antibodies, Neutralizing ,030104 developmental biology ,Epitope mapping ,chemistry ,Respiratory Syncytial Virus, Human ,biology.protein ,Antibody ,Glycoprotein ,Viral Fusion Proteins ,Epitope Mapping - Abstract
Building a better RSV vaccine Respiratory syncytial virus (RSV) causes severe respiratory disease, especially in infants and the elderly. However, attempts to produce effective human vaccines have largely been unsuccessful. Structure-based design has been used to generate an RSV fusion glycoprotein stabilized in its prefusion conformation (DS-Cav1). This immunogen is highly effective in mice and macaques. Crank et al. now report the results of a phase I vaccine clinical trial using the stabilized prefusion DS-Cav1 molecule. Four weeks after immunization, these vaccines elicited substantially more high-quality antibody titers than those typically generated using earlier RSV immunogens. The findings provide a proof of concept for how structural biology can contribute to precision vaccine design. Science , this issue p. 505
- Published
- 2018
24. The difference a day makes: Breeding remodels hearing, hormones and behavior in female Cope's gray treefrogs (Hyla chrysoscelis)
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Alexander T. Baugh, Mark A. Bee, and Megan D. Gall
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Male ,Time Factors ,Physiology ,Hyla chrysoscelis ,Neural recruitment ,03 medical and health sciences ,Behavioral Neuroscience ,chemistry.chemical_compound ,Sexual Behavior, Animal ,0302 clinical medicine ,Endocrinology ,Corticosterone ,Seasonal breeder ,Endocrine system ,Animals ,biology ,Behavior, Animal ,Endocrine and Autonomic Systems ,Reproduction ,Auditory Threshold ,biology.organism_classification ,Hormones ,030227 psychiatry ,Auditory brainstem response ,chemistry ,Mate choice ,Auditory Perception ,Evoked Potentials, Auditory ,Female ,Anura ,Vocalization, Animal ,030217 neurology & neurosurgery ,Hormone - Abstract
In seasonal breeders, there are behavioral, endocrine, and neural adaptations that promote the sexual receptivity of females and tune their sensory systems to detect and discriminate among advertising males and to successfully copulate. What happens immediately after this key life history event is unclear, but this transitional moment offers a window into the mechanisms that remodel sexual phenotypes. In this study of wild female Cope's gray treefrogs (Hyla chrysoscelis), we tested the hypothesis that oviposition results in a suite of coordinated changes in the sexual phenotype. Specifically, we predicted that sexual receptivity and discrimination behaviors would decline along with circulating concentrations of steroid hormones (corticosterone, estradiol, testosterone) and auditory sensitivity to the acoustic frequencies emphasized in male advertisement calls. We conducted these trait measurements before and after oviposition (ca. 24-h period). There was a 100% decrease in behavioral responsiveness after oviposition, and the concentrations of all three steroids plummeted during this brief window of time, especially testosterone. Moreover, higher concentrations of corticosterone—an important component of the endocrine stress response—were associated with longer response latencies, suggesting that adrenal hormones should be considered in future studies on the hormonal basis of mate choice. Counter to our prediction, auditory sensitivity increased following oviposition, and the amplitude of the auditory brainstem response was influenced by concentrations of estradiol. In pre-oviposition females auditory sensitivity diminished with increasing estradiol concentrations, while sensitivity increased with increasing estradiol concentrations in post-oviposition females, suggesting non-linear estrogenic modulation of peripheral auditory neural recruitment. Overall, our results indicate that there is considerable remodeling of behavioral output following oviposition that co-occurs with changes in both endocrine and sensory physiology.
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- 2018
25. Frequency sensitivity in the auditory periphery of male and female black-capped chickadees (Poecile atricapillus)
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Arick Wong and Megan D. Gall
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Male ,Analysis of Variance ,medicine.medical_specialty ,biology ,Audiology ,biology.organism_classification ,Chickadee ,Songbird ,Songbirds ,medicine.anatomical_structure ,Poecile ,Auditory Perception ,Evoked Potentials, Auditory ,medicine ,Animals ,Auditory system ,Female ,Animal Science and Zoology ,Animal communication - Abstract
The black-capped chickadee is a songbird that has been used extensively as a model of animal communication in field and laboratory settings. Although many studies have focused on the complex call and song systems of the black-capped chickadee, relatively fewer studies have focused on chickadee audition. However, we do know from behavioral and molecular work that chickadees (and auditory processing areas in their brains) discriminate between artificially generated tones, between conspecific and heterospecific vocalizations, and among different types of conspecific vocalizations. In this paper we investigate peripheral auditory processing of frequency in the black-capped chickadee and the potential influence of sex on frequency sensitivity using a technique called auditory evoked potentials. We found that male and female black-capped chickadees did not differ in any measure of frequency sensitivity. Both sexes had the greatest sensitivity to frequencies between 2 and 4 kHz. This range of frequencies is well represented in black-capped chickadee song, partially supporting the idea that sender and receiver coevolve. Finally, we suggest that the call and song system of North American parids make them an ideal taxonomic group for comparative work exploring the relationship between call systems and the evolution of auditory processing.
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- 2015
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26. Seasonal plasticity in auditory processing of the envelope and temporal fine structure of sounds in three songbirds
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Jeffrey R. Lucas, Alejandro Vélez, and Megan D. Gall
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Baeolophus ,biology ,Sitta carolinensis ,Ecology ,Foraging ,Seasonality ,Frequency following response ,biology.organism_classification ,medicine.disease ,Attraction ,Poecile ,medicine ,Seasonal breeder ,Animal Science and Zoology ,Ecology, Evolution, Behavior and Systematics - Abstract
Songs mediate mate attraction and territorial defence in songbirds during the breeding season. Outside of the breeding season, the avian vocal repertoire often includes calls that function in foraging, antipredator and social behaviours. Songs and calls can differ substantially in their spectral and temporal content. Given seasonal variation in the vocal signals, the sender–receiver matching hypothesis predicts seasonal changes in auditory processing that match the physical properties of songs during the breeding season and calls outside of it. We tested this hypothesis in white-breasted nuthatches, Sitta carolinensis, tufted titmice, Baeolophus bicolor, and Carolina chickadees, Poecile carolinensis. We measured the envelope-following response (EFR), which quantifies phase locking to the amplitude envelope, and the frequency-following response (FFR), which quantifies phase locking to the temporal fine structure of sounds. Because songs and calls of nuthatches are amplitude modulated at different rates, we predicted seasonal changes in EFRs that match the rates of amplitude fluctuation in songs and calls. In chickadees and titmice, we predicted stronger FFRs during the spring and stronger EFRs during the winter because songs are tonal and calls include amplitude-modulated elements. In all three species, we found seasonal changes in EFRs and FFRs. EFRs varied across seasons and matched the amplitude modulations of songs and calls in nuthatches. In addition, female chickadees had stronger EFRs in the winter than in the spring. In all three species, FFRs during the spring tended to be stronger in females than in males. We also found species differences in EFRs and FFRs in both seasons; EFRs and FFRs tended to be higher in nuthatches than in chickadees and titmice. We discuss the potential mechanisms underlying seasonality in EFRs and FFRs and the implications of our results for communication during the breeding season and outside of it, when these three species form mixed-species flocks.
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- 2015
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27. Antigen expression determines adenoviral vaccine potency independent of IFN and STING signaling
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Mario Roederer, Alfredo Nicosia, Stefano Colloca, Andreia Costa, Robert A. Seder, Brenna J. Hill, Kathrin Kastenmüller, David Price, Riccardo Cortese, Patricia A. Darrah, Lingshu Wang, Ayako Yamamoto, Geoffrey M. Lynn, Kylie M. Quinn, Ross W. B. Lindsay, Cheng Cheng, Emma Gostick, Alan Aderem, Antonella Folgori, Jason G. D. Gall, Daniel E. Zak, Quinn, Kylie M., Zak, Daniel E., Costa, Andreia, Yamamoto, Ayako, Kastenmuller, Kathrin, Hill, Brenna J., Lynn, Geoffrey M., Darrah, Patricia A., Lindsay, Ross W. B., Wang, Lingshu, Cheng, Cheng, Nicosia, Alfredo, Folgori, Antonella, Colloca, Stefano, Cortese, Riccardo, Gostick, Emma, Price, David A., Gall, Jason G. D., Roederer, Mario, Aderem, Alan, and Seder, Robert A.
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Transcriptional Activation ,RM ,Cellular immunity ,Antigen presentation ,Gene Products, gag ,CD8-Positive T-Lymphocytes ,Biology ,Dendritic Cell ,Adenoviridae ,Cross-Priming ,Immune system ,Antigen ,Interferon ,Immunity ,medicine ,Animals ,Cytotoxic T cell ,Membrane Protein ,Antigens, Viral ,Mice, Knockout ,Antigen Presentation ,Vaccines, Synthetic ,Innate immune system ,Animal ,Medicine (all) ,Vaccination ,Membrane Proteins ,Viral Vaccines ,CD8-Positive T-Lymphocyte ,Dendritic Cells ,General Medicine ,Immunity, Innate ,eye diseases ,Mice, Inbred C57BL ,Receptors, Pattern Recognition ,QR180 ,Immunology ,Viral Vaccine ,Interferons ,Transcriptome ,Research Article ,Signal Transduction ,medicine.drug - Abstract
Recombinant adenoviral vectors (rAds) are lead vaccine candidates for protection against a variety of pathogens, including Ebola, HIV, tuberculosis, and malaria, due to their ability to potently induce T cell immunity in humans. However, the ability to induce protective cellular immunity varies among rAds. Here, we assessed the mechanisms that control the potency of CD8 T cell responses in murine models following vaccination with human-, chimpanzee-, and simian-derived rAds encoding SIV-Gag antigen (Ag). After rAd vaccination, we quantified Ag expression and performed expression profiling of innate immune response genes in the draining lymph node. Human-derived rAd5 and chimpanzee-derived chAd3 were the most potent rAds and induced high and persistent Ag expression with low innate gene activation, while less potent rAds induced less Ag expression and robustly induced innate immunity genes that were primarily associated with IFN signaling. Abrogation of type I IFN or stimulator of IFN genes (STING) signaling increased Ag expression and accelerated CD8 T cell response kinetics but did not alter memory responses or protection. These findings reveal that the magnitude of rAd-induced memory CD8 T cell immune responses correlates with Ag expression but is independent of IFN and STING and provide criteria for optimizing protective CD8 T cell immunity with rAd vaccines.
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- 2015
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28. Frequency sensitivity in Northern saw-whet owls (Aegolius acadicus)
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Megan D. Gall, Julia R. Beatini, and Glenn A. Proudfoot
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0106 biological sciences ,Northern saw-whet owl ,Male ,medicine.medical_specialty ,Sound Spectrography ,Physiology ,Aegolius ,Acoustics ,Stimulus (physiology) ,Biology ,Audiology ,010603 evolutionary biology ,01 natural sciences ,Predation ,03 medical and health sciences ,Behavioral Neuroscience ,0302 clinical medicine ,Hearing ,Species Specificity ,otorhinolaryngologic diseases ,medicine ,Evoked Potentials, Auditory, Brain Stem ,Animals ,Saw-whet owls ,Ecology, Evolution, Behavior and Systematics ,Skull ,Auditory Threshold ,Ear ,Audiogram ,biology.organism_classification ,Strigiformes ,Ear structure ,Acoustic Stimulation ,Hearing range ,Animal Science and Zoology ,Female ,sense organs ,Vocalization, Animal ,030217 neurology & neurosurgery - Abstract
Northern saw-whet owls (Aegolius acadicus) are known for their unique asymmetrical ear structure and ability to localize prey acoustically, yet few attempts have been made to explore the auditory capabilities of this species. In this study, we evoked auditory brainstem responses (ABRs) with tonebursts to assess three main hypotheses regarding the evolution of auditory sensitivity: sender-receiver matching, ecological constraints, and phylogenetic/morphological constraints. We found that ABR amplitude increased with increasing stimulus level, which is consistent with results in other avian species. ABR amplitudes, latencies, and thresholds indicate that the hearing range of Northern saw-whet owls extends from 0.7 to 8.6 kHz, with an extended frequency range of best sensitivity between 1.6 and 7.1 kHz. Sensitivity fell off rapidly above and below these frequencies. The average audiogram was structurally similar to those found in other species of owls, suggesting that phylogeny or morphology may be constraining the frequency range of auditory sensitivity. However, ABR thresholds were 10–25 dB lower than those of Eastern screech-owls (Megascops asio), with thresholds below 0 dB SPL in some individuals. The lowest thresholds were at frequencies not found in the vocalizations of Northern saw-whet owls, suggesting ecological constraints rather than conspecific vocalizations are driving absolute sensitivity.
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- 2017
29. Soo Ts'yawh 'Ilho Zah Ts'inli 'We Are All One' Tl'azt'en Nation's Ancestral History of Yeko
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Christopher D. Gall
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- 2017
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30. Song structure, not high‐frequency song content, determines high‐frequency auditory sensitivity in nine species of<scp>N</scp>ew<scp>W</scp>orld sparrows (<scp>P</scp>asseriformes:<scp>E</scp>mberizidae)
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Jeffrey R. Lucas, Alejandro Vélez, Megan D. Gall, and Jianing Fu
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Vocal communication ,biology ,Habitat ,Phylogenetic tree ,Evolutionary biology ,Ecology ,Sound propagation ,Spectral properties ,Emberizidae ,Audiogram ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Abstract
Summary The evolution of vocal signals can be constrained by a host of factors including habitat effects on sound propagation, morphology of sound-producing structures and phylogenetic relationships among species. Here, we asked whether auditory sensitivity over a broad range of frequencies correlates with the spectral content of conspecific vocalizations, or whether it is constrained by the overall structure of vocalizations, habitat effects on sound propagation or relatedness among species. We studied nine New World sparrows (Passeriformes: Emberizidae) including three open-habitat species, three scrub-like habitat species and three forest species. For each habitat, one species had pure-trilled songs, another had tonal songs and another had complex songs with tones, trills and amplitude-modulated buzzes. As predicted by the acoustic adaptation hypothesis, song spectral properties (specifically frequency and entropy) had the highest values in open-habitat species and the lowest values in forest species. Based on our results from song analyses, and the sender–receiver matching hypothesis, we predicted that open-habitat species would be more sensitive to high-frequency sounds compared to forest species. Contrary to this prediction, habitat and high-frequency song content had little effect on audiogram shape. Song type, however, had a strong effect, with species that produce complex songs showing higher sensitivity to high-frequency sounds than all other species. Our results suggest that the use of song frequency by receivers depends on song structure and not necessarily on song spectral content. Therefore, our current understanding of how signal-processing mechanisms should match signal properties appears to be too simple. When thinking about the evolution of signal-processing mechanisms, the multidimensionality of signals, and how the different dimensions can interact, should be considered.
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- 2014
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31. Identification of a Suppressor Mutation That Improves the Yields of Hexon-Modified Adenovirus Vectors
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Mcvey Duncan L, C.R. King, Jason G. D. Gall, Elena Semenova, D.E. Brough, Svetlana Konovalova, C. A. Thomas, Ping Chen, Joseph T. Bruder, Damodar Ettyreddy, and Greg Ekberg
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Genes, Viral ,viruses ,Genetic Vectors ,Molecular Sequence Data ,Immunology ,Biology ,Antibodies, Viral ,Virus Replication ,Microbiology ,Late protein ,Mice ,Suppression, Genetic ,Virology ,Vaccines and Antiviral Agents ,Animals ,Humans ,Amino Acid Sequence ,Vector (molecular biology) ,Gene ,Suppressor mutation ,Genetics ,Mice, Inbred BALB C ,Sequence Homology, Amino Acid ,Adenoviruses, Human ,Viral Vaccines ,Antibodies, Neutralizing ,Hypervariable region ,HEK293 Cells ,Amino Acid Substitution ,Viral replication ,Capsid ,Insect Science ,Mutation (genetic algorithm) ,Cytokines ,Capsid Proteins ,Female - Abstract
We have generated hexon-modified adenovirus serotype 5 (Ad5) vectors that are not neutralized by Ad5-specific neutralizing antibodies in mice. These vectors are attractive for the advancement of vaccine products because of their potential for inducing robust antigen-specific immune responses in people with prior exposure to Ad5. However, hexon-modified Ad5 vectors displayed an approximate 10-fold growth defect in complementing cells, making potential vaccine costs unacceptably high. Replacing hypervariable regions (HVRs) 1, 2, 4, and 5 with the equivalent HVRs from Ad43 was sufficient to avoid Ad5 preexisting immunity and retain full vaccine potential. However, the resulting vector displayed the same growth defect as the hexon-modified vector carrying all 9 HVRs from Ad43. The growth defect is likely due to a defect in capsid assembly, since DNA replication and late protein accumulation were normal in these vectors. We determined that the hexon-modified vectors have a 32°C cold-sensitive phenotype and selected revertants that restored vector productivity. Genome sequencing identified a single base change resulting in a threonine-to-methionine amino acid substitution at the position equivalent to residue 342 of the wild-type protein. This mutation has a suppressor phenotype (SP), since cloning it into our Ad5 vector containing all nine hypervariable regions from Ad43, Ad5.H(43m-43), increased yields over the version without the SP mutation. This growth improvement was also shown for an Ad5-based hexon-modified vector that carried the hexon hypervariable regions of Ad48, indicating that the SP mutation may have broad applicability for improving the productivity of different hexon-modified vectors.
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- 2013
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32. Analysis of human ITPase nucleobase specificity by site-directed mutagenesis
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Anthony Gall, Steven Heid, Ashley C. Moore, Amanda D. Gall, Martin K. Aune, Nicholas E. Burgis, and Ayaka Mori
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Biology ,Biochemistry ,Substrate Specificity ,Nucleobase ,chemistry.chemical_compound ,Escherichia coli ,Humans ,Pyrophosphatases ,Purine metabolism ,Peptide sequence ,Conserved Sequence ,chemistry.chemical_classification ,Nucleotides ,Adenine ,General Medicine ,Molecular biology ,Recombinant Proteins ,Amino acid ,Nucleobase binding ,chemistry ,Mutation ,Mutagenesis, Site-Directed ,Nucleic acid ,Nucleoside triphosphate ,Nucleoside - Abstract
Inosine triphosphate (ITP) pyrophosphohydrolase, or ITPase, is an intracellular enzyme that is responsible for the hydrolysis of the acidic anhydride bond between the alpha and beta phosphates in ITP, and other noncanonical nucleoside triphosphates, producing the corresponding nucleoside monophosphate and pyrophosphate. This activity protects the cell by preventing noncanonical nucleoside triphosphates from accumulating in (deoxy) nucleoside triphosphate ((d)NTP) pools and/or being integrated into nucleic acids. This enzyme is encoded by the ITPA gene in mammals. It has been reported that Itpa homozygous-null knock-out mice die before weaning and have gross cardiac abnormalities. Additionally, certain variations in the human ITPA gene have been linked to adverse reactions to the immunosuppressive prodrugs azathioprine and 6-mercaptopurine and protection against ribavirin-induced hemolytic anemia. These drugs are bioactivated to form noncanonical nucleoside triphosphates. Human ITPase enzymes engineered to modulate nucleobase specificity may be valuable tools for studying the role of ITPase in heart development and drug metabolism or developing gain-of-function mutants or inhibitory molecules. Based on x-ray crystallography and amino acid sequence data, a panel of putative human ITPase nucleobase specificity mutants has been generated. We targeted eight highly conserved amino acid positions within the ITPase sequence that correspond to amino acids predicted to directly interact with the nucleobase or help organize the nucleobase binding pocket. The ability of the mutants to protect against exogenous and endogenous noncanonical purines was tested with two Escherichia coli complementation assays. Nucleobase specificity of the mutants was investigated with an in vitro biochemical assay using ITP, GTP and ATP as substrates. This methodology allowed us to identify gain-of-function mutants and categorize the eight amino acid positions according to their ability to protect against noncanonical purines as follows: Glu-22, Trp-151 and Arg-178, essential for protection; Phe-149, Asp-152, Lys-172 and Ser-176, intermediate protection; His-177, dispensable for protection against noncanonical purines.
- Published
- 2013
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33. Comparative Analysis of the Magnitude, Quality, Phenotype, and Protective Capacity of Simian Immunodeficiency Virus Gag-Specific CD8+ T Cells following Human-, Simian-, and Chimpanzee-Derived Recombinant Adenoviral Vector Immunization
- Author
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Robert A. Seder, Bernard Moss, Linda S. Wyatt, Patricia A. Darrah, Cecilia Morgan, Wing Pui Kong, Antonella Folgori, Ayako Yamamoto, Dana Berry, Mariano Esteban, Kylie M. Quinn, Lingshu Wang, Ross W. B. Lindsay, Jason G. D. Gall, Cheng Cheng, Robert T. Bailer, Richard A. Koup, Alfredo Nicosia, Carmen E. Gómez, Riccardo Cortese, Andreia Costa, David Price, Emma Gostick, Mario Roederer, Stefano Colloca, Gary J. Nabel, Quinn, Km, Da Costa, A, Yamamoto, A, Berry, D, Lindsay, Rw, Darrah, Pa, Wang, L, Cheng, C, Kong, Wp, Gall, Jg, Nicosia, Alfredo, Folgori, A, Colloca, S, Cortese, R, Gostick, E, Price, Da, Gomez, Ce, Esteban, M, Wyatt, L, Moss, B, Morgan, C, Roederer, M, Bailer, Rt, Nabel, Gj, Koup, Ra, and Seder, Ra
- Subjects
Male ,Cellular immunity ,Pan troglodytes ,Quality Assurance, Health Care ,T cell ,Genetic Vectors ,Immunology ,Epitopes, T-Lymphocyte ,Gene Products, gag ,Priming (immunology) ,CD8-Positive T-Lymphocytes ,Biology ,Article ,Epitope ,Adenoviridae ,Immunophenotyping ,Viral vector ,Mice ,Antigen ,medicine ,Animals ,Humans ,Immunology and Allergy ,Cytotoxic T cell ,Mice, Inbred BALB C ,Virology ,Recombinant Proteins ,Mice, Inbred C57BL ,Disease Models, Animal ,HEK293 Cells ,medicine.anatomical_structure ,HIV-1 ,Simian Immunodeficiency Virus ,CD8 - Abstract
Recombinant adenoviral vectors (rAds) are the most potent recombinant vaccines for eliciting CD8+ T cell–mediated immunity in humans; however, prior exposure from natural adenoviral infection can decrease such responses. In this study we show low seroreactivity in humans against simian- (sAd11, sAd16) or chimpanzee-derived (chAd3, chAd63) compared with human-derived (rAd5, rAd28, rAd35) vectors across multiple geographic regions. We then compared the magnitude, quality, phenotype, and protective capacity of CD8+ T cell responses in mice vaccinated with rAds encoding SIV Gag. Using a dose range (1 × 107–109 particle units), we defined a hierarchy among rAd vectors based on the magnitude and protective capacity of CD8+ T cell responses, from most to least, as: rAd5 and chAd3, rAd28 and sAd11, chAd63, sAd16, and rAd35. Selection of rAd vector or dose could modulate the proportion and/or frequency of IFN-γ+TNF-α+IL-2+ and KLRG1+CD127−CD8+ T cells, but strikingly ∼30–80% of memory CD8+ T cells coexpressed CD127 and KLRG1. To further optimize CD8+ T cell responses, we assessed rAds as part of prime-boost regimens. Mice primed with rAds and boosted with NYVAC generated Gag-specific responses that approached ∼60% of total CD8+ T cells at peak. Alternatively, priming with DNA or rAd28 and boosting with rAd5 or chAd3 induced robust and equivalent CD8+ T cell responses compared with prime or boost alone. Collectively, these data provide the immunologic basis for using specific rAd vectors alone or as part of prime-boost regimens to induce CD8+ T cells for rapid effector function or robust long-term memory, respectively.
- Published
- 2013
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34. Age-Related Characteristics of Foraging Habitats and Foraging Behaviors in the Black Phoebe (Sayornis nigricans)
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Megan D. Gall, Esteban Fernández-Juricic, and Leah D. Hough
- Subjects
Perch ,Vigilance (behavioural ecology) ,Habitat ,Ecology ,Visually guided ,Age related ,Foraging ,Biology ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics ,Predation - Abstract
We studied how age affects selection of foraging microhabitats, foraging behaviors, and rates of vigilance in the black phoebe (Sayornis nigricans). Juveniles generally perched higher in trees than adults and in areas with higher intensity of light, which may increase the difficulty of visually tracking prey. Juveniles allocated more effort to visual searching prior to a foraging attempt and flew farther than adults to capture a prey item. When at rest on a perch, juveniles monitored the environment more slowly than adults, suggesting lower levels of vigilance. In general, our results suggest that differences between ages in foraging behavior of visually guided predators may be influenced by intensity of ambient light in their foraging territories.
- Published
- 2013
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35. CLIMATIC CONTROL ON FLUVIAL-DELTAIC SYSTEMS OF THE LACUSTRINE GREEN RIVER FORMATION, UINTA BASIN, UTAH
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Lauren P. Birgenheier, Ryan D. Gall, Michael D. Vanden Berg, and Ellen M. Rosencrans
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Hydrology ,Fluvial ,Structural basin ,Green River Formation ,Geology - Published
- 2017
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36. Effects of habitat and urbanization on the active space of brown-headed cowbird song
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Kelly L. Ronald, Eric S. Bestrom, Megan D. Gall, and Jeffrey R. Lucas
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Male ,Cowbird ,Sound Spectrography ,Phrase ,Acoustics and Ultrasonics ,Acoustics ,Singing ,Songbirds ,Motion ,Arts and Humanities (miscellaneous) ,Urbanization ,Animals ,Ecosystem ,biology ,Auditory Threshold ,Signal Processing, Computer-Assisted ,biology.organism_classification ,Active space ,Sound ,Geography ,Acoustic wave propagation ,Acoustic Stimulation ,Habitat ,Auditory Perception ,Brown-headed cowbird ,Physical geography ,Noise ,Perceptual Masking ,Communication channel - Abstract
The ability of a receiver to detect a signal is a product of the signal characteristics at the sender, habitat-specific degradation of the signal, and properties of the receiver's sensory system. Active space describes the maximum distance at which a receiver with a given sensory system can detect a signal in a given habitat. Here the effect of habitat structure and urbanization on brown-headed cowbird (Molothrus ater) perched song active space was explored. The active space of the cowbird song was affected by both habitat type and level of urbanization. High frequency (4 to 6 kHz) portions of song resulted in the maximum active space. Surprisingly, the active space was the largest in open urban environments. The hard surfaces found in open urban areas (e.g., sidewalks, buildings) may provide a sound channel that enhances song propagation. When the introductory phrase and final phrase were analyzed separately, the active space of the introductory phrase was found to decrease in open urban environments but the active space of the final phrase increased in open urban environments. This suggests that different portions of the vocalization may be differentially influenced by habitat and level of urbanization.
- Published
- 2012
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37. Gene-Based Vaccination with a Mismatched Envelope Protects against Simian Immunodeficiency Virus Infection in Nonhuman Primates
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Mitzi M. Donaldson, Jason G. D. Gall, Daniel D. Pinschewer, Kathryn E. Foulds, Lingshu Wang, Wei Shi, Norman L. Letvin, Saran Bao, Ling Shen, Stephen D. Schmidt, Sung Youl Ko, Mario Roederer, John R. Mascola, Cheng Cheng, John Paul Todd, Rahul Roychoudhuri, Srinivas S. Rao, Mohammed Asmal, Wing Pui Kong, Lukas Flatz, and Gary J. Nabel
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Male ,viruses ,Immunology ,Immunization, Secondary ,Simian Acquired Immunodeficiency Syndrome ,Viremia ,Biology ,medicine.disease_cause ,Microbiology ,Virus ,Adenoviridae ,Mice ,Immune system ,Transduction, Genetic ,Immunity ,Virology ,Vaccines and Antiviral Agents ,Vaccines, DNA ,medicine ,Animals ,Lymphocytic choriomeningitis virus ,AIDS Vaccines ,SAIDS Vaccines ,Gene Products, env ,Simian immunodeficiency virus ,medicine.disease ,Macaca mulatta ,Vaccination ,Immunization ,Insect Science ,HIV-1 ,Female ,Simian Immunodeficiency Virus - Abstract
The RV144 trial demonstrated that an experimental AIDS vaccine can prevent human immunodeficiency virus type 1 (HIV-1) infection in humans. Because of its limited efficacy, further understanding of the mechanisms of preventive AIDS vaccines remains a priority, and nonhuman primate (NHP) models of lentiviral infection provide an opportunity to define immunogens, vectors, and correlates of immunity. In this study, we show that prime-boost vaccination with a mismatched SIV envelope (Env) gene, derived from simian immunodeficiency virus SIVmac239, prevents infection by SIVsmE660 intrarectally. Analysis of different gene-based prime-boost immunization regimens revealed that recombinant adenovirus type 5 (rAd5) prime followed by replication-defective lymphocytic choriomeningitis virus (rLCMV) boost elicited robust CD4 and CD8 T-cell and humoral immune responses. This vaccine protected against infection after repetitive mucosal challenge with efficacies of 82% per exposure and 62% cumulatively. No effect was seen on viremia in infected vaccinated monkeys compared to controls. Protection correlated with the presence of neutralizing antibodies to the challenge viruses tested in peripheral blood mononuclear cells. These data indicate that a vaccine expressing a mismatched Env gene alone can prevent SIV infection in NHPs and identifies an immune correlate that may guide immunogen selection and immune monitoring for clinical efficacy trials.
- Published
- 2012
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38. Dynamic Roughness as a Means of Leading-Edge Separation Flow Control
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Shanti Hamburg, P. D. Gall, Alric Rothmayer, and Wade W. Huebsch
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Physics::Fluid Dynamics ,Airfoil ,Boundary layer ,Flow control (fluid) ,Flow separation ,Skin friction drag ,Computer science ,Surface roughness ,Aerospace Engineering ,Laminar flow ,Mechanics ,Aerodynamics - Abstract
The aircraft industry, as a whole, has been deeply concerned with improving the aerodynamic efficiency of current and future flight vehicles, particularly in the commercial and military markets. However, of particular interest to the field of aerodynamics is the elusive concept of a workable flow control mechanism. Effective flow control is a concept which if properly applied can increase aerodynamic efficiency. Various concepts and ideas to obtain successful flow control have been studied in an attempt to reap these rewards. Some examples include boundary layer blowing (steady and periodic), suction, and synthetic jets. The overall goal of flow control is to increase performance. The specific objectives of flow control include: 1) delay or eliminate flow separation, 2) delay boundary layer transition or 3) reduce skin friction drag. The purpose of this research is to investigate dynamic surface roughness as a novel method of flow control technology for external boundary layer flows. As opposed to standard surface roughness, dynamic roughness incorporates small time dependent perturbations to the surface of the airfoil. These surface perturbations are actual humps and/or ridges that are on the scale of the laminar boundary layer, and oscillate with an unsteady motion. Research has shown that this can provide a means to modify the instantaneous and mean velocity profile near the wall and favorably control the existing state of the boundary layer. The results of this study have shown that dynamic roughness can be a viable alternative in delaying and/or eliminating the leading edge laminar separation bubble and hence reaping some of the rewards of an effective flow control system, while also maintaining some physical advantages over other techniques.
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- 2012
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39. Species and sex effects on auditory processing in brown-headed cowbirds and red-winged blackbirds
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Megan D. Gall, Jeffrey R. Lucas, and Lauren E. Brierley
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Brood parasite ,Cowbird ,medicine.medical_specialty ,biology ,media_common.quotation_subject ,Audiogram ,Audiology ,biology.organism_classification ,Passerine ,Developmental psychology ,Perception ,biology.animal ,otorhinolaryngologic diseases ,Agelaius ,medicine ,Animal Science and Zoology ,Vocal learning ,Psychology ,Sound pressure ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
Brown-headed cowbirds, Molothrus ater , and red-winged blackbirds, Agelaius phoeniceus , are frequently used as model systems for communication and vocal learning; however, relatively little is known about their auditory processing. Although auditory space and acoustic signal space are assumed to coevolve, it is less clear when, or even if, sex differences are expected in auditory processing. Here we explored frequency-specific auditory responses using auditory brainstem responses (ABRs). We generated sex-specific audiograms using two methods: visual detection and cross-correlation. We also measured the amplitude and latency of ABRs to stimuli over a range of frequencies (0.5–6 kHz) and intensities (8–72 dB sound pressure level). Thresholds generated by both methods were good predictors of behavioural thresholds in the best frequency range (2–4 kHz). The visual detection method resulted in a slightly better correspondence with behavioural thresholds than the cross-correlation method above and below best frequencies. We found no significant differences between red-winged blackbird and brown-headed cowbird ABR thresholds; however, overall, females had lower thresholds than males. Sex differences were larger than species differences for ABR amplitude, while latency differences were greater between species than between sexes. Taken together our results suggest that despite high-frequency vocal elements, brown-headed cowbirds do not have enhanced high-frequency auditory sensitivity when measured with auditory evoked potentials. Moreover, we show that females have greater auditory sensitivity than males, which is generally not seen in other passerine species.
- Published
- 2011
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40. Adenovirus type-35 vectors block human CD4 + T-cell activation via CD46 ligation
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Gunilla B. Karlsson Hedestam, Jason G. D. Gall, Richard A. Koup, Cornelia Gujer, Karin Loré, Constantinos Petrovas, William C. Adams, and Gerald M. McInerney
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CD4-Positive T-Lymphocytes ,Coxsackie and Adenovirus Receptor-Like Membrane Protein ,medicine.drug_class ,viruses ,Blotting, Western ,Genetic Vectors ,Biology ,Lymphocyte Activation ,medicine.disease_cause ,Monoclonal antibody ,Adenoviridae ,Flow cytometry ,Membrane Cofactor Protein ,medicine ,Humans ,Receptor ,Regulation of gene expression ,Multidisciplinary ,medicine.diagnostic_test ,CD46 ,CD28 ,Dendritic Cells ,Biological Sciences ,Flow Cytometry ,Molecular biology ,Blot ,Receptors, Virus - Abstract
Recombinant adenoviruses (rAds) based on types 5 (rAd5) and 35 (rAd35) have emerged as important vaccine delivery vectors in clinical testing for a variety of pathogens. A major difference between these vectors is their binding to cellular receptors used for infection. Whereas rAd5 binds coxsackie-adenovirus receptor (CAR), rAd35 binds the complement regulatory protein CD46. Although rAd35 infected and phenotypically matured human blood dendritic cells (DCs) more efficiently than rAd5, we show here that rAd35 markedly suppressed DC-induced activation of naive CD4 + T cells. rAd35 specifically blocked both DCs and anti-CD3/CD28 mAb-induced naive T-cell proliferation and IL-2 production. This effect was also observed in CD4 + memory T cells but to a lesser extent. The suppression occurred by rAd35 binding to CD46 on T cells and was independent of infection. CD46 engagement with mAb mimicked the effects of rAd35 and also led to deficient NF-κB nuclear translocation. In contrast, rAd5 and rAd35 vectors with ablated CD46 binding did not inhibit T-cell activation. Our findings provide insights into the basic biology of adenoviruses and indicate that CD46 binding may have an impact on the generation of primary CD4 + T-cell responses by Ad35.
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- 2011
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41. Visual systems and vigilance behaviour of two ground-foraging avian prey species: white-crowned sparrows and California towhees
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Esteban Fernández-Juricic, Sarah Thomas, Colleen O’Rourke, Jacqueline R. Lynch, Megan D. Gall, and Tracy Dolan
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Sparrow ,genetic structures ,biology ,Ecology ,Visual space ,media_common.quotation_subject ,Emberizidae ,biology.organism_classification ,eye diseases ,Visual field ,Predation ,Vigilance (behavioural ecology) ,biology.animal ,Contrast (vision) ,Animal Science and Zoology ,Binocular vision ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
Predator–prey interactions are regulated by the ability of individuals to detect, and then approach or avoid, each other. In visually guided organisms, the prevalent view is that predators have large binocular visual fields and high acuity, whereas prey have wide lateral areas and low acuity, which could affect vigilance behaviour. We characterized the configuration of the visual system (visual fields, retinal topography, visual acuity) and vigilance behaviour (head movement rate) of two ground-foraging avian prey (white-crowned sparrow, Zonotrichia leucophrys, California towhee, Pipilo crissalis) with laterally placed eyes. We found that the binocular field of both species (45°) was actually wider than those of some of their avian predators. Both species also had a single retinal specialization (high ganglion cell density area) located in the centro-temporal sector of the retina, which projected into the lateral and frontal part of the head. Wide binocular fields may increase binocular contrast to detect and visually guide the bill towards prey items. Both species had wider lateral visual fields and faster head movement rates than some of their predators, probably to enhance detection and visual tracking of predators. California towhees made faster sideways movements of the head than did white-crowned sparrows, probably to cover visual space more quickly with their retinal specialization because of the comparatively lower spatial resolution of their retinal periphery. Alternatively, California towhees might move their heads more rapidly to monitor for potential risks (e.g. competitors, predators), as they rely mostly on personal information because of their degree of territoriality. Our findings suggest that the visual system and vigilance behaviour of these two avian prey species combine traits to enhance predator detection through large visual coverage and fast head movements, but also to enhance food detection at close range through enhanced binocular vision.
- Published
- 2011
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42. Differential Specificity and Immunogenicity of Adenovirus Type 5 Neutralizing Antibodies Elicited by Natural Infection or Immunization
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Cecilia Morgan, Mario Roederer, C. Richter King, Richard A. Koup, Barney S. Graham, Cheng Cheng, Gary J. Nabel, Jason G. D. Gall, Lindsey R. Baden, Gavin J. Churchyard, Michael C. Keefer, Ann Duerr, M. Juliana McElrath, and Martha Nason
- Subjects
Adenoviridae Infections ,viruses ,Genetic Vectors ,Human Immunodeficiency Virus Proteins ,Immunology ,Gene Products, gag ,Microbiology ,Adenoviridae ,Epitopes ,Immune system ,Antibody Specificity ,Immunity ,Virology ,Vaccines and Antiviral Agents ,Humans ,Neutralizing antibody ,Antigens, Viral ,AIDS Vaccines ,biology ,Immunogenicity ,Vaccine trial ,biochemical phenomena, metabolism, and nutrition ,Vaccine efficacy ,Antibodies, Neutralizing ,Vaccination ,Immunization ,Insect Science ,biology.protein - Abstract
A recent clinical trial of a T-cell-based AIDS vaccine delivered with recombinant adenovirus type 5 (rAd5) vectors showed no efficacy in lowering viral load and was associated with increased risk of human immunodeficiency virus type 1 (HIV-1) infection. Preexisting immunity to Ad5 in humans could therefore affect both immunogenicity and vaccine efficacy. We hypothesized that vaccine-induced immunity is differentially affected, depending on whether subjects were exposed to Ad5 by natural infection or by vaccination. Serum samples from vaccine trial subjects receiving a DNA/rAd5 AIDS vaccine with or without prior immunity to Ad5 were examined for the specificity of their Ad5 neutralizing antibodies and their effect on HIV-1 immune responses. Here, we report that rAd5 neutralizing antibodies were directed to different components of the virion, depending on whether they were elicited by natural infection or vaccination in HIV vaccine trial subjects. Neutralizing antibodies elicited by natural infection were directed largely to the Ad5 fiber, while exposure to rAd5 through vaccination elicited antibodies primarily to capsid proteins other than fiber. Notably, preexisting immunity to Ad5 fiber from natural infection significantly reduced the CD4 and CD8 cell responses to HIV Gag after DNA/rAd5 vaccination. The specificity of Ad5 neutralizing antibodies therefore differs depending on the route of exposure, and natural Ad5 infection compromises Ad5 vaccine-induced immunity to weak immunogens, such as HIV-1 Gag. These results have implications for future AIDS vaccine trials and the design of next-generation gene-based vaccine vectors.
- Published
- 2010
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43. Effects of Physical and Visual Access to Prey on Patch Selection and Food Search Effort in a Sit-and-Wait Predator, the Black Phoebe
- Author
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Megan D. Gall and Esteban Fernández-Juricic
- Subjects
Visual search ,Perch ,Light intensity ,biology ,Ecology ,Food search ,Foraging ,Animal Science and Zoology ,biology.organism_classification ,Predator ,Ecology, Evolution, Behavior and Systematics ,Selection (genetic algorithm) ,Predation - Abstract
For sit-and-wait predators, a key factor influencing foraging decisions is the ability to detect and track prey, which is expected to vary with the physical and light properties of the environment. We assessed how changes in visual and physical prey availability altered perch selection and visual search activity (head-movement rate and bout length) in the Black Phoebe (Sayornis nigricans), a sit-and-wait flycatcher. We used an observational approach by studying individuals in foraging areas that varied in the ecological factors of interest across an urbanized landscape. Black Phoebes selected perches with high levels of tree and grass cover and low light intensity, which could increase access to prey and reduce predation risk. Visual searching for prey decreased as grass cover increased and tree cover decreased, likely because of less physical and visual obstruction. Visual searching increased with light intensity, probably as a result of the effects of glare, but chromatic contrast did not exer...
- Published
- 2009
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44. Enhanced Induction of Intestinal Cellular Immunity by Oral Priming with Enteric Adenovirus 41 Vectors
- Author
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Cheng Cheng, Gary J. Nabel, Wing Pui Kong, Sung Youl Ko, David A. Einfeld, Jason G. D. Gall, Masaru Kanekiyo, C. Richter King, and Lingshu Wang
- Subjects
Cellular immunity ,Genetic Vectors ,Immunology ,Immunization, Secondary ,Administration, Oral ,Priming (immunology) ,Heterologous ,CD8-Positive T-Lymphocytes ,Biology ,medicine.disease_cause ,Injections, Intramuscular ,complex mixtures ,Microbiology ,Virus ,Adenoviridae ,Mice ,Immune system ,Intestinal mucosa ,Virology ,Vaccines and Antiviral Agents ,Intestine, Small ,medicine ,Animals ,Immunity, Mucosal ,AIDS Vaccines ,Mice, Inbred BALB C ,Vaccines, Synthetic ,env Gene Products, Human Immunodeficiency Virus ,Small intestine ,medicine.anatomical_structure ,Insect Science ,Female ,Immunization - Abstract
Human immunodeficiency virus type 1 (HIV-1) infection is characterized by the rapid onset of intestinal T-cell depletion that initiates the progression to AIDS. The induction of protective immunity in the intestinal mucosa therefore represents a potentially desirable feature of a preventive AIDS vaccine. In this study, we have evaluated the ability of an enteric adenovirus, recombinant adenovirus 41 (rAd41), to elicit intestinal and systemic immune responses by different immunization routes, alone or in combination with rAd5. rAd41 expressing HIV envelope (Env) protein induced cellular immune responses comparable to those of rAd5-based vectors after either a single intramuscular injection or a DNA prime/rAd boost. Oral priming with rAd41-Env followed by intramuscular boosting with rAd5-Env stimulated a more potent CD8 + T-cell response in the small intestine than the other immunization regimens. Furthermore, the direct injection of rAd41-Env into ileum together with intramuscular rAd5-Env boosting increased Env-specific cellular immunity markedly in mucosal as well as systemic compartments. These data demonstrate that heterologous rAd41 oral or ileal priming with rAd5 intramuscular boosting elicits enhanced intestinal mucosal cellular immunity and that oral or ileal vector delivery for primary immunization facilitates the generation of mucosal immunity.
- Published
- 2009
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45. A proficiency testing method for detecting antibodies against Brucella abortus in quantitative and qualitative serological tests
- Author
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Klaus Nielsen, T. Renteria, A. Nicola, and D. Gall
- Subjects
Indirect elisa ,Veterinary medicine ,Animal health ,biology ,business.industry ,General Medicine ,Standard score ,Serology ,Brucella abortus ,Immunology ,biology.protein ,Proficiency testing ,Medicine ,Animal Science and Zoology ,Antibody ,business - Abstract
A proficiency testing panel for detecting antibodies against Brucella abortus was developed and evaluated by both primary binding and conventional serological tests, using the guidelines of the World Organisation for Animal Health and the International Organization for Standardization Guide 43-1. All serological tests were judged satisfactory. Among the primary binding tests, the competitive enzyme-linked immunosorbent assay (ELISA 2) and the indirect enzyme-linked immunosorbent assay (ELISA 1), with standard deviation indices (z-scores) of -0.06 and 0.10, respectively, performed best. Similarly, E(n) numbers (i.e. a way of comparing different measurements of performance) of 0 for both the competitive ELISA 2 and the indirect ELISA 1 indicated that these tests performed best in the initial round of proficiency testing. The conventional serological tests all passed the panel. Comparing data from both the quantitative and qualitative tests demonstrated that this proficiency testing scheme was fit for the purpose for which it was designed.
- Published
- 2008
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46. ORGANIC CARBON ISOTOPE AND FLUVIAL-LACUSTRINE SEDIMENTATION RECORD OF PALEOCENE TO EARLY EOCENE WARMING EVENTS, WASATCH AND GREEN RIVER FORMATIONS, UINTA BASIN, UTAH
- Author
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Piret Plink-Björklund, Ryan D. Gall, Ellen M. Rosencrans, and Lauren P. Birgenheier
- Subjects
Total organic carbon ,Paleontology ,Isotope ,Fluvial ,Sedimentation ,Structural basin ,Geology - Published
- 2016
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47. Avian Auditory Processing at Four Different Scales: Variation Among Species, Seasons, Sexes, and Individuals
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Megan D. Gall, Alejandro Vélez, Jeffrey R. Lucas, and Kenneth S. Henry
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0106 biological sciences ,Communication ,biology ,Sensory processing ,business.industry ,medicine.medical_treatment ,media_common.quotation_subject ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Songbird ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Auditory brainstem response ,Variation (linguistics) ,Mate choice ,Evolutionary biology ,Perception ,medicine ,Auditory system ,business ,030217 neurology & neurosurgery ,Matching hypothesis ,media_common - Abstract
Previous research on songbirds has typically focused on variation in production of vocal communication signals. These studies have addressed the mechanisms and functional significance of variation in vocal production across species and, within species, across seasons and among individuals (e.g., males of varying resource-holding capacity). However, far less is known about parallel variation in sensory processing, particularly in non-model species. A relationship between vocal signals and auditory processing is expected based on the sender–receiver matching hypothesis. Here, we review our recent comparative studies of auditory processing in songbirds conducted using auditory evoked potentials (AEPs) in a variety of field-caught songbird species. AEPs are voltage waveforms recorded from the scalp surface that originate from synchronous neural activity and provide insight into the sensitivity, frequency resolution, and temporal resolution of the subcortical auditory system. These studies uncovered variation in auditory processing at a number of different scales that was generally consistent with the sender–receiver matching hypothesis. For example, differences in auditory processing were uncovered among species and across seasons that may enhance perception of communication signals in species-specific habitats and during periods of mate selection, respectively. Sex differences were also revealed, often in season-specific patterns, and surprising individual differences were observed in auditory processing of mate attraction signals but not of calls used in interspecific contexts. While much remains to be learned, these studies highlight a previously unrecognized degree of parallel variation in songbirds, existing at diverse hierarchical scales, between production of vocal communication signals and subcortical auditory processing.
- Published
- 2016
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48. The effects of call-like masking diminish after nightly exposure to conspecific choruses in green treefrogs (Hyla cinerea)
- Author
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Megan D. Gall and Walter Wilczynski
- Subjects
Male ,0106 biological sciences ,medicine.medical_specialty ,Physiology ,Aquatic Science ,Social stimuli ,Audiology ,Stimulus (physiology) ,010603 evolutionary biology ,01 natural sciences ,Hearing ,medicine ,Animals ,Response Amplitude ,0501 psychology and cognitive sciences ,050102 behavioral science & comparative psychology ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Communication ,biology ,business.industry ,Interstimulus interval ,05 social sciences ,Mating Preference, Animal ,Hyla ,biology.organism_classification ,Insect Science ,Forward masking ,Auditory Perception ,Evoked Potentials, Auditory ,Female ,Animal Science and Zoology ,Anura ,Vocalization, Animal ,Psychology ,business ,Perceptual Masking - Abstract
One of the major difficulties encountered by animals that select mates using acoustic signals is discriminating individual calls from the background noise generated by other conspecifics. Reducing the effects of conspecific masking could improve discrimination of individual calls from background noise. We used auditory evoked potentials to investigate the effects of forward masking on the responses to artificial calls in male and female treefrogs (Hyla cinerea), as well as whether hearing advertisement calls over several nights, as happens in natural frog choruses, could modify the effects of masking. We found that response amplitude decreased with decreasing interstimulus interval when the masker was equal in amplitude to the stimulus. We also found evidence of a priming effect, whereby response amplitude at lower masker amplitudes was greater than when the target stimulus was not preceded by a masker. Finally, we found that the effect of masking was diminished by 10 nights of chorus exposure (i.e. responses were stronger to target stimuli), while there was no change in response in the control group. Our results show that hearing dynamic social stimuli, like frog choruses, can alter the responses of the auditory periphery in a way that could enhance the detection of and response to conspecific acoustic communication signals.
- Published
- 2016
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49. STABILIZATION OF EOCENE CLIMATE RECORDED IN FLUVIAL DEPOSITS OF THE DOUGLAS CREEK MEMBER IN THE GREEN RIVER FORMATION, MAIN CANYON, UINTA BASIN, UTAH
- Author
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Ryan D. Gall, Michael D. Vanden Berg, and Lauren P. Birgenheier
- Subjects
Canyon ,Hydrology ,geography ,geography.geographical_feature_category ,Fluvial ,Structural basin ,Green River Formation ,Geology - Published
- 2016
- Full Text
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50. The distribution of alcohols in the products of the fischer-tropsch synthesis
- Author
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C. C. Hall, E. J. Gibson, and D. Gall
- Subjects
Propanol ,chemistry.chemical_compound ,Ethanol ,Chemistry ,Butanol ,Radical ,Organic chemistry ,Alcohol ,Fischer–Tropsch process ,Methanol ,Decomposition - Abstract
An alcohol-rich product obtained by Fischer-Tropsch synthesis at 160–175° and 150 lb./sq. in. (gauge), in the presence of a cobalt catalyst has been examined. It was found that n-primary alcohols constituted 40% by weight of the organic liquid products (oil, spirit and organic matter in the water) and 92·4% of the total oxygenated products. The proportions of acids and carbonyl compounds were, therefore, markedly lower than those reported to be present in an iron-catalyst product of the Hydrocol type. The proportion of methanol present was very low, ethanol was present in the largest proportion and the proportions of the alcohols higher than propanol decreased with increasing carbon number. The proportion of propanol was less than that of butanol or pentanol so that the carbon-number distribution curve for the alcohols showed a marked inflexion in the C3-C4 region, which is not shown by the published distribution curve for the alcohols in the Hydrocol product. From a study of the relative rates of decomposition of a series of n-primary alcohols at 150° in the presence of hydrogen and a cobalt catalyst, it was possible to plot a curve relating alcohol stability and carbon number. This curve resembled the distribution curve in showing a low value for C1, a maximum at C2 and a marked inflexion in the C3-C4 region, suggesting that the individual alcohols are present in the products of synthesis in proportions which are determined, at least in part, by their relative stabilities under the synthesis conditions. It is considered that the alcohol distribution curve is of a form which would be predicted if the mechanism of alcohol formation involved step-wise addition of methylene radicals to one end of a growing chain terminated by a hydroxymethylene radical, and if the survival of the alcohols was controlled by their relative stabilities. From a consideration of the observed results and of those reported by other workers in the field, it is concluded that there is a balance of evidence in favour of the view that alcohols are the precursors of hydrocarbons in the synthesis.
- Published
- 2007
- Full Text
- View/download PDF
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