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1. Additional file 1 of Hypomethylation in HBV integration regions aids non-invasive surveillance to hepatocellular carcinoma by low-pass genome-wide bisulfite sequencing

Author

Haikun Zhang, Peiling Dong, Shicheng Guo, Chengcheng Tao, Chen, Wei, Wenmin Zhao, Jiakang Wang, Cheung, Ramsey, Villanueva, Augusto, Fan, Jian, Huiguo Ding, Schrodi, Steven J., Zhang, Dake, and Changqing Zeng

Abstract

Additional file 1:. Fig. S1. Methylation profiling of 5 pilot cfDNA samples with relative high-depth WGBS. Fig. S2. The percentage and enrichment score of DMCs inside and outside CpG islands at different genomic elements. Fig. S3. The average DNA methylation level profiles along 10 kb upstream and downstream of the HBV integration sites in all the tumor tissues and paired buffy coat samples. Fig. S4. The difference between buffy coat and tumor tissue of Methylgenome, MethylHBV, MethylAlu and MethylLINE. Fig. S5. The efficiency of re-sampling sequencing reads for low pass WGBS in 5 pilot cfDNA samples. Fig. S6. The enrichment scores of CpGs at different genomic elements by total sequencing reads from published dataset. Fig. S7. ROC curves for HCC detection using hypomethylation around HBV integration regions.

Published
2020
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2. IMPACT OF SVR ON LONG-TERM LIVER-RELATED OUTCOMES: RESULTS OF THE REAL-C REGISTRY AT 23 CENTERS FROM HONG KONG, KOREA, JAPAN AND TAIWAN

Author

Tanaka, Yasuhito, Toyoda, Hidenori, Jun, Dae Won, Enomoto, Masaru, Huang, Chung-Feng, Ogawa, Eiichi, Yasuda, Satoshi, Iio, Etsuko, Iwane, Shinji, Haga, Hiroaki, Dai, Chia-Yen, Jeong, Jae Yoon, Park, Seung Ha, Wong, Grace L., Lee, Dong Hyun, Takahashi, Hirokazu, Huang, Jee-Fu, Tran, Sally, Maeda, Mayumi, Cheung, Ramsey, Ueno, Yoshiyuki, Eguchi, Yuichiro, Hayashi, Jun, Furusyo, Norihiro, Tamori, Akihiro, Kumada, Takashi, Yu, Ming-Lung, Nguyen, Mindie H., Ahn, Sang Bong, Henry, Linda, Hsu, Yao-Chun, Huang, Ching-I, Jun, Mi Jung, Jung, Jang Han, Kam, Leslie, Lee, Mei-Hsuan, Liang, Po-Cheng, Mizuta, Akiko, Song, Do Seon, Tsai, Pei-Chien, Tseng, Cheng-Hao, Hwai-I Yang, Yeh, Ming-Lun, and Yoon, Eileen

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