147 results on '"Chenchen Zhu"'
Search Results
2. Marketing Strategies During the Time of Covid-19--What Role does Customer Behaviour Changes Play?
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Huizhuo Zheng, Chenchen Zhu, Ho Yung, and Peiyu Feng
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This paper discusses both the psychological and physical effects of COVID-19 on customer behavior changes and elaborates on companies approaches to address these changes through marketing strategies and marketing policies. By comparing with the Global Financial Crisis (GFC), the paper analyzes the similar change patterns in customer behavior that COVID-19 shares with GFC and what marketers can leverage from historical experiences. However, the public-health concerns have been playing significant part during this crisis when it comes to customer behavior changes, such as restricted mobilities have been incentivizing customers to shop in different categories and to rely on online services more than ever. In this paper, cases covering different industries have been studied and presented to illustrate how marketers can utilize their technical skills to make the unique charlatanistic of this crisis an opportunity to help the organization to grow.
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- 2023
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3. A Green-Emitting Luminol Analogue as the Next-Generation Chemiluminescent Substrate in Biochemical Analysis
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Fuqian Chen, Xiaotong Xia, Dong Ye, Ting Li, Xinxin Huang, Chun Cai, Chenchen Zhu, Chaozhan Lin, Tao Deng, and Fang Liu
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Analytical Chemistry - Published
- 2023
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4. Transcription Factor GATA4 Regulates Cell Type-Specific Splicing Through Direct Interaction With RNA in Human Induced Pluripotent Stem Cell-Derived Cardiac Progenitors
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Lili Zhu, Krishna Choudhary, Barbara Gonzalez-Teran, Yen-Sin Ang, Reuben Thomas, Nicole R. Stone, Lei Liu, Ping Zhou, Chenchen Zhu, Hongmei Ruan, Yu Huang, Shibo Jin, Angelo Pelonero, Frances Koback, Arun Padmanabhan, Nandhini Sadagopan, Austin Hsu, Mauro W. Costa, Casey A. Gifford, Joke G. van Bemmel, Ruth Hüttenhain, Vasanth Vedantham, Bruce R. Conklin, Brian L. Black, Benoit G. Bruneau, Lars Steinmetz, Nevan J. Krogan, Katherine S. Pollard, and Deepak Srivastava
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Alternative Splicing ,Mice ,Physiology (medical) ,Induced Pluripotent Stem Cells ,Animals ,Humans ,RNA ,Heart ,Myocytes, Cardiac ,Cardiology and Cardiovascular Medicine ,GATA4 Transcription Factor - Abstract
Background: GATA4 (GATA-binding protein 4), a zinc finger–containing, DNA-binding transcription factor, is essential for normal cardiac development and homeostasis in mice and humans, and mutations in this gene have been reported in human heart defects. Defects in alternative splicing are associated with many heart diseases, yet relatively little is known about how cell type– or cell state–specific alternative splicing is achieved in the heart. Here, we show that GATA4 regulates cell type–specific splicing through direct interaction with RNA and the spliceosome in human induced pluripotent stem cell–derived cardiac progenitors. Methods: We leveraged a combination of unbiased approaches including affinity purification of GATA4 and mass spectrometry, enhanced cross-linking with immunoprecipitation, electrophoretic mobility shift assays, in vitro splicing assays, and unbiased transcriptomic analysis to uncover GATA4’s novel function as a splicing regulator in human induced pluripotent stem cell–derived cardiac progenitors. Results: We found that GATA4 interacts with many members of the spliceosome complex in human induced pluripotent stem cell–derived cardiac progenitors. Enhanced cross-linking with immunoprecipitation demonstrated that GATA4 also directly binds to a large number of mRNAs through defined RNA motifs in a sequence-specific manner. In vitro splicing assays indicated that GATA4 regulates alternative splicing through direct RNA binding, resulting in functionally distinct protein products. Correspondingly, knockdown of GATA4 in human induced pluripotent stem cell–derived cardiac progenitors resulted in differential alternative splicing of genes involved in cytoskeleton organization and calcium ion import, with functional consequences associated with the protein isoforms. Conclusions: This study shows that in addition to its well described transcriptional function, GATA4 interacts with members of the spliceosome complex and regulates cell type–specific alternative splicing via sequence-specific interactions with RNA. Several genes that have splicing regulated by GATA4 have functional consequences and many are associated with dilated cardiomyopathy, suggesting a novel role for GATA4 in achieving the necessary cardiac proteome in normal and stress-responsive conditions.
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- 2023
5. <scp>L1CAM</scp> promotes vasculogenic mimicry formation by <scp>miR</scp> ‐143‐3p‐induced expression of hexokinase 2 in glioma
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Yishan Huang, Chenchen Zhu, Pei Liu, Fan Ouyang, Juanjuan Luo, Chunjiao Lu, Bo Tang, and Xiaojun Yang
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Cancer Research ,Oncology ,Genetics ,Molecular Medicine ,General Medicine - Published
- 2023
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6. Molecularly engineered tumor acidity-responsive plant toxin gelonin for safe and efficient cancer therapy
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Guo-Bin Ding, Chenchen Zhu, Qian Wang, Huiyan Cao, Bin-Chun Li, Peng Yang, Roland H. Stauber, Guangjun Nie, and Zhuoyu Li
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Biomaterials ,Biomedical Engineering ,Biotechnology - Abstract
Due to the unsatisfactory therapeutic efficacy and inexorable side effects of small molecule antineoplastic agents, extensive efforts have been devoted to the development of more potent macromolecular agents with high specificity. Gelonin is a plant-derived protein toxin that exhibits robust antitumor effect via inactivating ribosomes and inhibiting protein synthesis. Nonetheless, its poor internalization ability to tumor cells has compromised the therapeutic promise of gelonin. In this study, a tumor acidity-responsive intracellular protein delivery system ─ functional gelonin (Trx-pHLIP-Gelonin, TpG) composed of a thioredoxin (Trx) tag, a pH low insertion peptide (pHLIP) and gelonin, was designed and obtained by genetic recombination technique for the first time. TpG could effectively enter into tumor cells under weakly acidic conditions and markedly suppress tumor cell proliferation via triggering cell apoptosis and inhibiting protein synthesis. Most importantly, treatment by intravenous injection into subcutaneous SKOV3 solid tumors in a mouse model showed that TpG was much more effective than gelonin in curtailing tumor growth rates with negligible toxicity. Collectively, our present work suggests that the tumor acidity-targeted delivery manner endowed by pHLIP offers a new avenue for efficient delivery of other bioactive substances to acidic diseased tissues.
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- 2022
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7. Efficiency Encapsulation of FK506 with New Dual Self‐Assembly Multi‐Hydrophobic‐Core Nanoparticles for Preventing Keratoplasty Rejection
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Dongmei Wang, Baoshan Huang, Chenchen Zhu, Lei Wang, Jiahui Jin, Jingyang Tan, Qing Li, Shengjin Xiang, Kaihui Nan, and Sen Lin
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Biomaterials ,Biomedical Engineering ,Pharmaceutical Science - Published
- 2023
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8. Global research trends on epigenetics and neuropathic pain: A bibliometric analysis
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Chenchen Zhu, Weiquan Zhong, Chan Gong, Binglin Chen, and Jiabao Guo
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Cellular and Molecular Neuroscience ,Molecular Biology - Abstract
ObjectiveNeuropathic pain (NP) is a common disease that manifests with pathological changes in the somatosensory system. In recent years, the interactions of NP with the epigenetic mechanism have been increasingly elucidated. However, only a few studies have used bibliometric tools to systematically analyze knowledge in this field. The objective of this study is to visually analyze the trends, hotspots, and frontiers in epigenetics and NP research by using a bibliometric method.MethodsStudies related to epigenetics and NP were searched from the Science Citation Index-Expanded of the Web of Science Core Collection database. Search time is from inception to November 30, 2022. No restrictions were placed on language. Only articles and reviews were included as document types. Data on institutions, countries, authors, journal distribution, and keywords were imported into CiteSpace software for visual analysis.ResultsA total of 867 publications met the inclusion criteria, which spanned the period from 2000 to 2022. Over the years, the number of publications and the frequency of citations exhibited a clear upward trend in general, reaching a peak in 2021. The major contributing countries in terms of the number of publications were China, the United States, and Japan. The top three institutions were Rutgers State University, Xuzhou Medical University, and Nanjing Medical University. Molecular Pain, Pain, and Journal of Neuroinflammation contributed significantly to the volume of issues. Among the top 10 authors in terms of the number of publications, Tao Yuan-Xiang contributed 30 entries, followed by Zhang Yi with 24 and Wu Shao-Gen with 20. On the basis of the burst and clusters of keywords, “DNA methylation,” “Circular RNA,” “acetylation,” “long non-coding RNA,” and “microglia” are global hotspots in the field.ConclusionThe bibliometric analysis indicates that the number of publications related to epigenetics and NP is exhibiting a rapid increase. Keyword analysis shows that “DNA methylation,” “Circular RNA,” “acetylation,” “long non-coding RNA” and “microglia” are the most interesting terms for researchers in the field. More rigorous clinical trials and additional studies that explore relevant mechanisms are required in the future.
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- 2023
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9. Probing the serum albumin binding site of fenamates and photochemical protein labeling with a fluorescent dye
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Tao Deng, Jing Zhao, Danfeng Peng, Xinqian He, Xin-an Huang, Chaozhan Lin, Chenchen Zhu, Lei Wang, and Fang Liu
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Binding Sites ,Fenamates ,Spectrometry, Fluorescence ,Organic Chemistry ,Humans ,Serum Albumin, Human ,Physical and Theoretical Chemistry ,Photochemical Processes ,Biochemistry ,Serum Albumin ,Fluorescent Dyes ,Protein Binding - Abstract
Human serum albumin (HSA) can bind with numerous drugs, leading to a significant influence on drug pharmacokinetics as well as undesirable drug-drug interactions due to competitive binding. Probing the HSA drug binding site thus offers great opportunities to reveal drug-HSA binding profiles. In the present study, a fluorescent probe (
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- 2022
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10. Near‐Death Cells Cause Chemotherapy‐Induced Metastasis via ATF4‐Mediated NF‐ κ B Signaling Activation
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Chenchen Zhu, Pei Liu, Chuan‐Yuan Li, Yuli Zhang, Jiang Yin, Linlin Hou, Guopei Zheng, and Xinjian Liu
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General Chemical Engineering ,General Engineering ,General Physics and Astronomy ,Medicine (miscellaneous) ,General Materials Science ,Biochemistry, Genetics and Molecular Biology (miscellaneous) - Published
- 2023
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11. Design and implementation of SM4 algorithm with a cuttable structure
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Ruyi She, Chenchen Zhu, and Peihe Jiang
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- 2022
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12. GATA4 regulates mitochondrial biogenesis and functions during cardiac development and rescues cardiac and mitochondrial functions impaired by TKIs
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Qing Liu, Haodi Wu, Zhana Duren, Chao Jiang, Kevin Van Bortle, Mingtao Zhao, Hongchao Guo, Chenchen Zhu, Qing-Jun Luo, Bingqing Zhao, Jun Liu, David Marciano, Joshua Gruber, Andrew Lipchik, Anil Narasimha, Nathaniel Watson, Ming-Shian Tsai, Takaaki Furihata, Lei Tian, Eric Wei, Yingxin Li, Lars Steinmetz, Wing H. Wong, Mark Kay, Joseph Wu, and Michael Snyder
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Tyrosine kinase inhibitors (TKIs) have been widely used for cancer chemotherapy, but they also cause cardiotoxicities in cancer patients. In this study, we used human stem cells as an in-vitro system to interrogate the mechanisms underlying drug-induced toxicity in differentiated cardiomyocytes, including anticancer tyrosine kinase inhibitor (TKI) drugs, including imatinib, sunitinib, and vandetanib. Sublethal TKI exposure produces multiple effects, including disarranged sarcomere structure, interrupted Ca2+-handling, and impaired mitochondrial function, evident of TKI-induced toxicity in differentiated cardiomyocytes. GATA4-mediated regulatory networks, including key mitochondrial target genes, emerge as significant molecular signatures in integrated analyses of transcriptome and chromatin accessibility dynamics. We find that, on a molecular level, GATA4 acts as a regulatory factor in mitochondrial biogenesis and OXPHOS by directly regulating specific metabolism-related genes, such as PPARGC1A. Functional genomic experiments targeting GATA4 reveals that GATA4 upregulation by CRISPR-activation is able to restore mitochondrial morphology and OXPHOS upon TKI exposure. In addition, we also identified that GATA4 is involved in regulation of mitochondrial biogenesis during early cardiac differentiation; inhibition of GATA4 during differentiation reduces mitochondrial DNA content, ATP production, and OXPHOS in differentiated cardiomyocytes, demonstrating a developmental role of GATA4 in metabolic management during early cardiac differentiation. Altogether, our study identifies a novel link between GATA4 and mitochondria in cardiomyocytes, and identifies GATA4 as a promising therapeutic target for reducing TKI-induced cardiotoxicity for human health.
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- 2022
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13. New chemical structures and liver-protective activity of the diterpenoids from Callicarpa rubella
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Ping Chen, Yimin Huang, Xueer Zhang, Zhongxiang Zhao, Zhanghua Sun, Hui Cui, Chaozhan Lin, Guangtian Peng, Aizhi Wu, and Chenchen Zhu
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Pharmacology ,Drug Discovery ,General Medicine - Abstract
Callicarpa rubella is a characteristic folk herb in the genus Callicarpa, and has abundant ethnobotanical usage as indigenous medicine in Lingnan area of P. R. China. However, the phytochemical and pharmacological properties of C. rubella was rarely investigated. Now, three new diterpenoids, named rubellapene A-C (1-3), along with five known analogues (4-8), were isolated from C. rubella. Their structures were determined by spectroscopic methods, quantum chemical electronic circular dichroism calculations and single-crystal X-ray diffraction analysis. Notably, the norditerpenoids C
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- 2022
14. Inhibition effects of aluminum dust explosions by various kinds of ammonium polyphosphate
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Tianjiao Zhang, Zongling Zhang, Chenchen Zhu, and Wei Gao
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Control and Systems Engineering ,General Chemical Engineering ,Energy Engineering and Power Technology ,Management Science and Operations Research ,Safety, Risk, Reliability and Quality ,Industrial and Manufacturing Engineering ,Food Science - Published
- 2023
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15. Design, synthesis, and biological evaluation of novel NO-releasing 4-chromanone derivatives as potential vasodilator agents
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Hao Shi, Liyan Xiong, Chenchen Zhu, Jing Wang, Yi Li, Yunchun Luo, Tingfang Wang, and Chuan Zhang
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Pharmacology ,Drug Discovery ,Organic Chemistry ,Molecular Medicine ,Biochemistry - Abstract
The nitric oxide/cyclic guanosine monophosphate (NO/cGMP) signaling pathway is an effective mechanism involved in the treatment of hypertension. In our search for potential antihypertensive agents, a series of novel NO-donor derivatives of the 4-chromanone skeleton were designed and synthesized by coupling furoxans or nitrooxy NO-donor moieties. All derivatives showed enhanced nitric oxide releasing capacity and vasodilator activity with EC
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- 2022
16. Comparative Pharmacokinetics of Three Bioactive Diterpenoids of Rabdosia serra Extract in Normal and Con A-Induced Liver Injury Rats Using UPLC-MS/MS
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Fangle Liu, Yun Zeng, Pengyu Dai, Kaiwen Huang, Kaihui Zhang, Tao Tao, Meiqi Wang, Chenchen Zhu, and Chaozhan Lin
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Pharmacology ,Pharmacology (medical) - Abstract
Rabdosia serra (Maxim.) Hara (R. serra), one of the source plants of “Xihuangcao”, has been widely used as a Chinese folk herb with the concomitant function of both medicine and foodstuff for the prevention and treatment of liver disease. Diterpenoids were considered as the major bioactive components in R. serra, responsible for their effect on hepatoprotection in previous phytochemical and pharmacological studies, while few comparative pharmacokinetic studies have been conducted under the physiological and pathological conditions. To reveal the difference in the pharmacokinetics process of R. serra extract (RSE) in normal and Con A-induced liver injury rats, a rapid ultra-high-pressure liquid chromatography–tandem mass spectrometry method (total running time: 5 min) was established to simultaneously determine three bioactive diterpenoids (enmein, epinodosin, and isodocarpin) in rat plasma. The results showed significant differences in the pharmacokinetic properties of three analytes between the physiological and pathological states. Compared with normal rats, the AUC of the three analytes was remarkably higher in liver injury rats, while the Tmax, T1/2, and MRT were shortened. It indicated that RSE has higher exposure and quicker elimination in liver injury rats than that in normal rats. Our results suggested that the pharmacokinetics of hepatoprotective medications was affected by liver injury, which prospected to provide essential information for guiding the healthcare and clinical application of R. serra in pathological states.
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- 2022
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17. Pharmacokinetic Study of Four Major Bioactive Components of Liandan Xiaoyan Formula in Ulcerative Colitis and Control Rats Using UPLC-MS/MS
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Kaihui, Zhang, Zenghui, Lu, Qian, Wang, Fangle, Liu, Meiqi, Wang, Chaozhan, Lin, and Chenchen, Zhu
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Pharmacology ,Pharmacology (medical) - Abstract
Liandan Xiaoyan Formula (LXF), a classic Traditional Chinese medicine (TCM) formula, is composed of two Chinese herbal medicines for treating bowel disease under the TCM theory. This study aimed to develop a rapid, stable, sensitive, and reliable method based on ultra-high performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) to simultaneously determine four major bioactive components of LXF (andrographolide, dehydroandrographolide, 1-methoxicabony-β-carboline, 4-methoxy-5-hydroxy-canthin-6-one) in rat serum and evaluate the pharmacokinetic characteristics of LXF in ulcerative colitis (UC) and control rats. After pretreating by protein precipitation with methanol, separation was performed on a UPLC C18 column using gradient elution with a mobile phase consisting of acetonitrile and 0.1% formic acid at a flowing rate of 0.4 ml/min. Detection was performed on Triple-TOF™ 5600 mass spectrometry set at the positive ionization and multiple reaction monitoring (MRM) mode. The validated method showed good linearity (R2 ≥ 0.9970), the intra- and inter-day accuracy were within ±11.58%, whereas the intra- and inter-day precision were less than 13.79%. This method was validated and applied to compare the pharmacokinetic profiles of the analytes in serum of UC induced by dextran sulphate sodium (DSS) and control rats after oral administration of LXF. The results showed that four major bioactive components of LXF were quickly absorbed after oral administration in both groups, with higher exposure levels in the UC group. This relationship between the active ingredients’ pharmacokinetic properties provided essential scientific information for applying LXF in clinical.
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- 2022
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18. Absorption characteristics of ilexgenin A and ilexsaponin B1 in human umbilical vein endothelial cells after administration of the total triterpenoid saponins from Ilex pubescens
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Jingwen Qiu, Xueying Shang, Bingying Chen, Rongyu Bai, Yurong Wu, Ying Wang, Xin Wan, Yuan Zhou, Chenchen Zhu, Ren Zhang, Juan Zhang, Zhongxiang Zhao, and Lei Zhang
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Pharmacology ,Tandem Mass Spectrometry ,Clinical Biochemistry ,Drug Discovery ,Human Umbilical Vein Endothelial Cells ,Humans ,General Medicine ,Ilex ,Saponins ,Molecular Biology ,Biochemistry ,Triterpenes ,Analytical Chemistry - Abstract
Ilex pubescens is a famous Chinese herbal medicine, frequently used to treat cardiovascular disease in South China. In this study, we aim to explore the absorption properties of ilexgenin A (C1) and ilexsaponin B1 (C3) in vascular endothelial cells after administration of the total triterpenoid saponins from Ilex pubescens (IPTS) and clarify the possible transport mechanisms. A UPLC-qTOF-MS/MS system was used to identify the components in IPTS that could be intracellularly transported by human umbilical vein endothelial cells (HUVECs). Afterwards, a rapid, highly selective and sensitive method was established to simultaneously quantify the concentration of C1 and C3 in HUVECs after administration of IPTS. The results demonstrate that pretreatment with IPTS could promote the survival of HUVECs and reduce the damage caused by TNF-α to HUVECs. Among the main 11 components in IPTS, eight components could be absorbed by HUVECs, including seven triterpenoids and one phenolic acid. The uptake of C1 and C3 by HUVECs occurred in a time-, temperature- and concentration-dependent manner, indicating the participation of passive diffusion and active transportation mechanisms. The two triterpenoid saponins all exhibited rapid absorption and a bimodal phenomenon in their concentration-time profiles, and equilibrium could be achieved after 6 h. Furthermore, C1 and C3 intracellular transportation was regulated by serum proteins, sodium-dependent glucose transporter 1 and P-glycoprotein. The current research for the first time demonstrates the in vitro pharmacokinetics characteristics of C1 and C3 in HUVECs lines, which could supply a new way of understanding the treatment of cardiovascular diseases.
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- 2022
19. Inhibition of ALG3 stimulates cancer cell immunogenic ferroptosis to potentiate immunotherapy
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Pei Liu, Cha Lin, Zheyu Liu, Chenchen Zhu, Zhongda Lin, Dan Xu, Jian Chen, Qian Huang, Chuan-Yuan Li, Linlin Hou, Ji-An Pan, and Xinjian Liu
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Pharmacology ,Cell Biology ,Lipids ,Mannosyltransferases ,Mice ,Cellular and Molecular Neuroscience ,Neoplasms ,Animals ,Ferroptosis ,Humans ,Molecular Medicine ,Immunotherapy ,Immune Checkpoint Inhibitors ,Molecular Biology - Abstract
Immune checkpoint blockade therapy has drastically improved the prognosis of certain advanced-stage cancers. However, low response rates and immune-related adverse events remain important limitations. Here, we report that inhibiting ALG3, an a-1,3-mannosyltransferase involved in protein glycosylation in the endoplasmic reticulum (ER), can boost the response of tumors to immune checkpoint blockade therapy. Deleting N-linked glycosylation gene ALG3 in mouse cancer cells substantially attenuates their growth in mice in a manner depending on cytotoxic T cells. Furthermore, ALG3 inhibition or N-linked glycosylation inhibitor tunicamycin treatment synergizes with anti-PD1 therapy in suppressing tumor growth in mouse models of cancer. Mechanistically, we found that inhibiting ALG3 induced deficiencies of post-translational N-linked glycosylation modification and led to excessive lipid accumulation through sterol-regulated element-binding protein (SREBP1)-dependent lipogenesis in cancer cells. N-linked glycosylation deficiency-mediated lipid hyperperoxidation induced immunogenic ferroptosis of cancer cells and promoted a pro-inflammatory microenvironment, which boosted anti-tumor immune responses. In human subjects with cancer, elevated levels of ALG3 expression in tumor tissues are associated with poor patient survival. Taken together, we reveal an unappreciated role of ALG3 in regulating tumor immunogenicity and propose a potential therapeutic strategy for enhancing cancer immunotherapy.
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- 2022
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20. A novel dry water with perfluorohexanone for explosion suppression of AlH3
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Chenlu Xue, Haipeng Jiang, Chenchen Zhu, and Wei Gao
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Applied Mathematics ,General Chemical Engineering ,General Chemistry ,Industrial and Manufacturing Engineering - Published
- 2023
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21. Nuclear translocation of cGAS orchestrates VEGF-A-mediated angiogenesis
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Juanjuan Luo, Chunjiao Lu, Yang Chen, Xuewei Wu, Chenchen Zhu, Wei Cui, Shicang Yu, Ningning Li, Yihang Pan, Weijiang Zhao, Qingkai Yang, and Xiaojun Yang
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General Biochemistry, Genetics and Molecular Biology - Published
- 2023
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22. β-Carboline alkaloids from Picrasma quassioides and their 3D-QSAR study on anti-inflammation in LPS-induced RAW 264.7 cells
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Pengyu Dai, Simin Chen, Meiqi Wang, Huanhuan Ma, Fangle Liu, Chaozhan Lin, and Chenchen Zhu
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Pharmacology ,Drug Discovery ,General Medicine - Published
- 2023
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23. Corrigendum to 'Network pharmacology-based mechanism prediction and pharmacological validation of Xiaoyan Lidan formula on attenuating alpha-naphthylisothiocyanate induced cholestatic hepatic injury in rats' [J. Ethnopharmacol. 270 (2021) 113816]
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Meiqi Wang, Fangle Liu, Yufeng Yao, Qiuyu Zhang, Zenghui Lu, Runjing Zhang, Changhui Liu, Chaozhan Lin, and Chenchen Zhu
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Pharmacology ,Drug Discovery - Published
- 2023
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24. Stepwise crosstalk between aberrant Nf1, Tp53 and Rb signalling pathways induces gliomagenesis in zebrafish
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Xiaojun Yang, Juanjuan Luo, Chun-Jiao Lu, Shaolin Xie, Dongsheng Su, Yihang Pan, Chenchen Zhu, Ningning Li, Pei Liu, De-Sheng Pei, Wan-Ping Bian, and Wei Cui
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Male ,0301 basic medicine ,Neurofibromatosis 1 ,Mutant ,Retinoblastoma Protein ,Animals, Genetically Modified ,Focal adhesion ,03 medical and health sciences ,0302 clinical medicine ,Glioma ,medicine ,Animals ,neoplasms ,Zebrafish ,PI3K/AKT/mTOR pathway ,Temozolomide ,biology ,Brain Neoplasms ,AcademicSubjects/SCI01870 ,fungi ,Original Articles ,Zebrafish Proteins ,tp53 ,Cell cycle ,zebrafish ,medicine.disease ,biology.organism_classification ,nervous system diseases ,Gene expression profiling ,030104 developmental biology ,nf1 ,030220 oncology & carcinogenesis ,Mutation ,Cancer research ,Female ,AcademicSubjects/MED00310 ,Neurology (clinical) ,Tumor Suppressor Protein p53 ,rb1 ,Signal Transduction ,medicine.drug - Abstract
The molecular pathogenesis of glioblastoma indicates that RTK/Ras/PI3K, RB and TP53 pathways are critical for human gliomagenesis. Here, several transgenic zebrafish lines with single or multiple deletions of nf1, tp53 and rb1 in astrocytes, were established to genetically induce gliomagenesis in zebrafish. In the mutant with a single deletion, we found only the nf1 mutation low-efficiently induced tumour incidence, suggesting that the Nf1 pathway is critical for the initiation of gliomagenesis in zebrafish. Combination of mutations, nf1;tp53 and rb1;tp53 combined knockout fish, showed much higher tumour incidences, high-grade histology, increased invasiveness, and shortened survival time. Further bioinformatics analyses demonstrated the alterations in RTK/Ras/PI3K, cell cycle, and focal adhesion pathways, induced by abrogated nf1, tp53, or rb1, were probably the critical stepwise biological events for the initiation and development of gliomagenesis in zebrafish. Gene expression profiling and histological analyses showed the tumours derived from zebrafish have significant similarities to the subgroups of human gliomas. Furthermore, temozolomide treatment effectively suppressed gliomagenesis in these glioma zebrafish models, and the histological responses in temozolomide-treated zebrafish were similar to those observed in clinically treated glioma patients. Thus, our findings will offer a potential tool for genetically investigating gliomagenesis and screening potential targeted anti-tumour compounds for glioma treatment., Luo et al. genetically induce gliomagenesis in zebrafish by generating zebrafish lines with single or multiple deletions of nf1, tp53, and rb1 in astrocytes, and characterize the lines at the morphological, histological and molecular levels.
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- 2020
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25. Nigakinone alleviates DSS-induced experimental colitis via regulating bile acid profile and FXR/NLRP3 signaling pathways
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Fangle Liu, Yufeng Yao, Qian Wang, Fengxue Zhang, Meiqi Wang, Chenchen Zhu, and Chaozhan Lin
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Pharmacology - Abstract
The correlation of bile acid (BA) metabolism disorder with the pathogenesis of ulcerative colitis (UC) is realized nowadays. Farnesoid X receptor (FXR), a controller for BA homeostasis and inflammation, is a promising target for UC therapy. Nigakinone has potential therapeutic effects on colitis. Herein, we investigated the anti-UC effects and mechanism of nigakinone in colitic animals induced by dextran sulfate sodium (DSS). The related targets involved in the nucleotide-binding oligomerization domain, leucine-rich repeat, and pyrin domain-containing 3 (NLRP3) signaling pathway were measured. BA-targeted metabolomics was employed to reveal the regulatory effects of nigakinone on BA profile in colitis, while expressions of FXR and its mediated targets referring to BA enterohepatic circulation were determined. The critical role of FXR in the treatment of nigakinone for colitis was studied via molecule-docking, dual-luciferase reporter® (DLR™) assays, FXR silencing cells, and FXR knockout mice. Results showed nigakinone attenuated DSS-induced colitis symptoms, including excessive inflammatory response by NLRP3 activation, and injury of the intestinal mucosal barrier. Nigakinone regulated BA disorders by controlling cholesterol hydroxylase and transporters mediated by FXR, then decreased BA accumulation in colon. Molecular-docking and DLR™ assays indicated FXR might be a target of nigakinone. In vitro, nigakinone restrained BA-induced inflammation and cell damage via FXR activation and inhibition of inflammatory cytokines. However, ameliorating effects of nigakinone on colitis were suppressed by FXR knockout or silencing in vivo or in vitro. Taken together, nigakinone ameliorated experimental colitis via regulating BA profile and FXR/NLRP3 signaling pathway.
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- 2022
26. Diterpenoid Alkaloids Isolated from
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Huanhuan, Ma, Yunxia, Ma, Zeren, Dawa, Yufeng, Yao, Meiqi, Wang, Kaihui, Zhang, Chenchen, Zhu, Fangle, Liu, and Chaozhan, Lin
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Alkaloids ,Magnetic Resonance Spectroscopy ,Molecular Structure ,Hepatocytes ,Delphinium ,Diterpenes ,Lipids - Abstract
This research aimed to excavate compounds with activity reducing hepatocytes lipid accumulation from
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- 2022
27. CLO20-068: Incidence and Potential Predictors of Thromboembolic Events in Epithelial Ovarian Carcinoma Patients During Perioperative Period
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Min Li, Zhihao Xu, Chuan Chen, Qingqing Zhou, Ying Zhou, Dabao Wu, Jing Zhu, Zhen Shen, Björn Nashan, Chenchen Zhu, Tianjiao Zhang, Jiwei Qin, Hanyuan Liu, and Lili Qian
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medicine.medical_specialty ,Oncology ,Epithelial ovarian carcinoma ,business.industry ,Internal medicine ,Incidence (epidemiology) ,medicine ,Perioperative ,business ,Gastroenterology - Published
- 2020
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28. CLO20-069: Evaluation and analysis of postoperative complications after primary cytoreduction for 47 cases of advanced epithelial ovarian cancer at stage IIIc and IV RUNNING HEAD (maximum 40 characters): Complications after primary cytoreduction in ovarian cancer
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Björn Nashan, Min Li, Yanhu Xie, Sinan Sun, Zheng Zhou, Rongzhu Chen, Chenchen Zhu, Ying Zhou, Guihong Wang, Hanhui Yao, Zhen Shen, Wei Wei, Tianjiao Zhang, Jing Zhu, Wei Zhang, Dabao Wu, Shuai Yin, and Jiwei Qin
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Oncology ,medicine.medical_specialty ,business.industry ,Head (linguistics) ,Internal medicine ,Medicine ,Epithelial ovarian cancer ,Stage IIIC ,business ,Ovarian cancer ,medicine.disease - Published
- 2020
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29. miR-203 Regulates Proliferation and Apoptosis of Colorectal Cancer Cells Through Targeting DJ-1
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Qingqing Shang, Na Du, Chenchen Zhu, Du Qiupeng, Xiaoli Li, Haiyan Mao, and Xiaoyun Li
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Colorectal cancer ,business.industry ,Apoptosis ,Biomedical Engineering ,medicine ,Cancer research ,Medicine (miscellaneous) ,Bioengineering ,medicine.disease ,business ,miR-203 ,digestive system diseases ,Biotechnology - Abstract
Objective: To assess whether miR-203 regulates DJ-1 expression, affects colorectal cancer cells through PTEN-PI3K/AKT signaling. Methods: Colorectal cancer (CRC) tissues and adjacent tissues were collected followed by analysis of the level of miR-203, DJ-1 and PTEN. miR-203 and DJ-1 level was measured in HCT116, SW480 and normal colorectal cell NCM460. miR-203 mimic or miR-NC was transfected into HCT116 or SW480 cells followed by measuring the level of miR-203, DJ-1, PTEN, p-AKT as well as cell apoptosis and proliferation. Results: Compared with tumor adjacent tissues, tumor tissues showed significantly lower level of miR-203 and PTEN, and higher level of DJ-1. There is a targeted relationship between miR-203 and DJ-1. Compared with NCM460 cell, HCT116 and SW480 cells displayed significantly lower miR-203 level and higher DJ-1 expression. miR-203 mimic significantly reduced DJ-1 and p-AKT level, increased PTEN expression, cell apoptosis and inhibited cell proliferation. Conclusion: Lower miR-203 and higher DJ-1 level is found in CRC patients. Upregulation of miR-203 inhibits DJ-1 expression, increases PTEN expression, impairs PI3K/AKT signaling, inhibits CRC cell proliferation and promotes apoptosis.
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- 2020
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30. Defense strategies of dominant plants under different grazing intensity in the typical temperate steppe of Nei Mongol, China
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Xiangyang Hou, Zihe Zhang, Jirui Gong, Biao Wang, Min Liu, Yong Ding, Chenchen Zhu, Bo Yang, and Ying Li
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geography ,geography.geographical_feature_category ,Ecology ,Steppe ,Stipa grandis ,Grazing ,Temperate climate ,Plant Science ,Biology ,China ,Ecology, Evolution, Behavior and Systematics ,Intensity (heat transfer) - Published
- 2020
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31. Unitail: Detecting, Reading, and Matching in Retail Scene
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Fangyi Chen, Han Zhang, Zaiwang Li, Jiachen Dou, Shentong Mo, Hao Chen, Yongxin Zhang, Uzair Ahmed, Chenchen Zhu, and Marios Savvides
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- 2022
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32. Task Offloading and Resource Allocation for Intersection Scenarios in Vehicular Edge Computing
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Limei Jin, Chenchen Zhu, Benhong Zhang, and Xiang Bi
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Computer Networks and Communications ,Control and Systems Engineering ,Electrical and Electronic Engineering ,Computer Science Applications - Published
- 2023
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33. Efficiently suppress of ferroptosis using deferoxamine nanoparticles as a new method for retinal ganglion cell protection after traumatic optic neuropathy
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Sen Lin, Wa Gao, Chenchen Zhu, Qi Lou, Cong Ye, Yueping Ren, Rashid Mehmood, Baoshan Huang, and Kaihui Nan
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Biomaterials ,Retinal Ganglion Cells ,Cyclooxygenase 2 ,Iron ,Optic Nerve Injuries ,Biomedical Engineering ,Animals ,Ferroptosis ,Nanoparticles ,Bioengineering ,Deferoxamine ,Rats - Abstract
Traumatic optic neuropathy (TON) is the major contributor to optic nerve damage, where the retinal ganglion cells (RGCs) are substantially lost. However, the underlying pathological mechanisms for these conditions remain largely elusive. Present work conducted a study on TON rat model, where the iron-dependent cyclooxygenase-2 (COX-2) overexpression and lipid peroxidation were observed in RGCs, suggesting ferroptosis, an iron-dependent non-apoptotic cell death, is involved in TON-induced death of RGCs. Hence, the newly formulated hyaluronic acid (HA)-based deferoxamine (DFO) nanoparticles (DFO-NPs) were intravitreally administrated in the rat model. It was hypothesized that the effective delivery of DFO, iron chelator, to the RGCs might rescue RGC ferroptosis from TON-induced injury. Also, since DFO is poor in bioavailability and of very short half-life in vivo, its safe and efficient intravitreal delivery is critical. Therefore, DFO-NPs were prepared by chemical grafting DFO onto HA molecules, and then crosslinking them in microemulsion bubbles for nanoparticles formulation. The nanoparticles were highly accumulated around the ganglionic cells and DFO uptake was increased in RGCs, accompanied by the significantly inhibited the overexpression of COX-2 and inactivation of glutathione peroxidase 4 (GPX4). These results indicate that DFO-NPs acted as an effective ferroptosis inhibitor, for the prevention of TON-induced RGC death. The current study provides new insights into the underlying mechanism of TON-induced RGC death, which may help to explore a novel strategy for the treatment of TON.
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- 2021
34. Accounting for land use in an analysis of the spatial and temporal characteristics of ecosystem services supply and demand in a desert steppe of Inner Mongolia, China
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Jirui Gong, Jiayu Shi, Chenchen Zhu, Xiaobing Li, Zihe Zhang, Weiyuan Zhang, Ying Li, and Yuxia Hu
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Ecology ,General Decision Sciences ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
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35. Authentication and Quality Assessment of Plumeriae Rubrae Flos by UHPLC-QTOF-MS/MS and UHPLC-DAD Combined With Chemometrics
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Yufeng Yao, Yuanyuan Xie, Pengyu Dai, Yunxia Ma, Chenchen Zhu, Fangle Liu, and Chaozhan Lin
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Pharmacology ,Flavonoids ,Tandem Mass Spectrometry ,Environmental Chemistry ,Flowers ,Chemometrics ,Agronomy and Crop Science ,Chromatography, High Pressure Liquid ,Food Science ,Analytical Chemistry ,Drugs, Chinese Herbal - Abstract
Background Plumeriae rubrae flos, the dried flowers of Plumeria rubra cv. acutifolia (PRCA), is one of the most important materials of herbal tea in China. Recently, due to the lack of effective quality evaluation standards, it has been found that Plumeria rubra (PR) and Plumeria rubra var. alba (PRVA) were pretended to be PRCA in herbal material markets. Objective To establish an effective method for comprehensive quality assessment on plumeriae rubrae flos, and distinguishing PRCA from its common adulterants, PR and PRVA. Method In this study, a method combined application of ultrahigh-performance liquid chromatography-quadrupole time-of-flight tandem mass spectrometry (UHPLC-QTOF-MS/MS), UHPLC with a diode array detector (UHPLC-DAD), and chemometrics was developed for qualitative and quantitative analysis of PRCA, PR, and PRVA, based on their multiple components. Results A total of 26 components were identified by UHPLC-QTOF-MS/MS, including nine flavonoids, eight iridoids, seven phenolic acids, and two coumarins from PRCA. Quantified fingerprints were established and validated using UHPLC-DAD based on 18 chemical markers in PRCA, PR, and PRVA samples. The multivariate statistical analysis of quantitative results demonstrated clear discrimination of PRCA, PR, and PRVA, which indicated that isoquercetin, luteolin-3ʹ-O-β-D-glucoside, 15-demethylplumieride P-E-coumarate, and 4-O-beta-glucopyranosyl-cis-coumaric acid could be considered the most obvious characteristic components for distinguishing PRCA from PR and PRVA. Conclusions A combination of quantitative fingerprint and chemometrics analysis provided an effective and reliable strategy for the quality control of PRCA. Highlights The current study was prospected to apply a comprehensive quality control method for plumeriae rubrae flos.
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- 2021
36. Single-molecule, full-length transcript isoform sequencing reveals disease mutation-associated RNA isoforms in cardiomyocytes
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Wu Wei, Benjamin Meder, Francesca Briganti, Chenchen Zhu, Han Sun, Lars M. Steinmetz, and Jingyan Wu
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Transcriptome ,Gene isoform ,Exon ,RNA Isoforms ,Complementary DNA ,Alternative splicing ,Computational biology ,Biology ,Gene ,Phenotype - Abstract
Alternative splicing generates differing RNA isoforms that govern phenotypic complexity of eukaryotes. Its malfunction underlies many diseases, including cancer and cardiovascular diseases. Comparative analysis of RNA isoforms at the genome-wide scale has been difficult. Here, we established an experimental and computational pipeline that performs de novo transcript annotation and accurately quantifies transcript isoforms from cDNA sequences with a full-length isoform detection accuracy of 97.6%. We generated a searchable, quantitative human transcriptome annotation with 31,025 known and 5,740 novel transcript isoforms (http://steinmetzlab.embl.de/iBrowser/). By analyzing the isoforms in the presence of RNA Binding Motif Protein 20 (RBM20) mutations associated with aggressive dilated cardiomyopathy (DCM), we identified 121 differentially expressed transcript isoforms in 107 cardiac genes. Our approach enables quantitative dissection of complex transcript architecture instead of mere identification of inclusion or exclusion of individual exons, as exemplified by novel IMMT isoforms. Thereby we achieve a path to direct differential expression testing independent of an existing annotation of transcript isoforms as the functional unit, instead of genes or exons, providing more immediate biological interpretation and higher resolution transcriptome comparisons.
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- 2021
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37. Genotyping of Circulating Tumor DNA Reveals the Clinically Actionable Mutation Landscape of Advanced Colorectal Cancer
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Xin Yi, Xianwei Mo, Xin Zhang, Jiayin Wang, Yongsheng Chen, Yong Cheng, Dan Liu, Lianpeng Chang, Yuxing Chu, Pingping Dai, Yuhua Gong, Ling Yang, Weiguo Cao, Yaping Xu, Yuting Yi, Jiaolin Zhou, Xuefeng Xia, Yanfang Guan, Guole Lin, Chenchen Zhu, Liren Li, and Liu Tao
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Adult ,Male ,0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,Mutation rate ,Genotype ,Somatic cell ,Colorectal cancer ,Clinical Decision-Making ,medicine.disease_cause ,Polymorphism, Single Nucleotide ,Sensitivity and Specificity ,Circulating Tumor DNA ,03 medical and health sciences ,0302 clinical medicine ,Gene Frequency ,Mutation Rate ,Polymorphism (computer science) ,Internal medicine ,Databases, Genetic ,Biomarkers, Tumor ,medicine ,Humans ,Molecular Targeted Therapy ,Allele frequency ,Genotyping ,Retrospective Studies ,Mutation ,business.industry ,High-Throughput Nucleotide Sequencing ,Middle Aged ,medicine.disease ,Data Accuracy ,030104 developmental biology ,Drug Resistance, Neoplasm ,030220 oncology & carcinogenesis ,Feasibility Studies ,Female ,Colorectal Neoplasms ,business - Abstract
Circulating tumor DNA (ctDNA) enables genomic profiling of colorectal cancer. We investigated therapeutic targets by performing ctDNA panel-captured sequencing of 152 blood samples from advanced stage patients, from which somatic mutations and potentially actionable targets were evaluated. An additional 11 matched tissue samples were retrospectively obtained to verify target validity. The mutation frequencies of 1,127 collective genetic variants identified in our study strongly correlated with those of multiple public databases (Pearson R2 = 0.92, P < 0.0001). The clonal fraction of driver genes was 90.3%, which was significantly higher than that of potential passenger genes (58.12%). Totally, 90 drug-sensitive genes from 56 patients (36.84%) were identified, including recurring targets PIK3CA, FBXW7, EGFR, BRAF, and NRAS. Various resistance mechanisms of anti-EGFR antibodies were revealed via ctDNA profiling, with 29 patients individually exhibiting multiple mechanisms, suggesting considerable resistance heterogeneity in our study population. Of the matched tissue/blood pairs, 88.14% of tissue-derived mutations were detected in ctDNA, and 88.9% of actionable targets were validated. The mutational landscape of ctDNA was highly consistent with tissue databases, and ctDNA profiling showed favorable concordance with tumor tissues in our matched analysis. Thus, comprehensive ctDNA genotyping is a promising noninvasive alternative to biopsy-derived analysis for determining targeted therapy in advanced colorectal cancer.
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- 2019
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38. Heparanase promotes glioma progression via enhancing CD24 expression
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Juanjuan Luo, Uri Barash, Karin Forsberg-Nilsson, Neta Ilan, Chenchen Zhu, Israel Vlodavsky, Dongsheng Su, Argyris Spyrou, Xiaojun Yang, Pei Liu, and Euvgeni Vlodavsky
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Cancer Research ,L1 ,Neural Cell Adhesion Molecule L1 ,Mice, SCID ,Tumor initiation ,medicine.disease_cause ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cell Movement ,Mice, Inbred NOD ,Cell Line, Tumor ,Glioma ,medicine ,Animals ,Humans ,Gene silencing ,Heparanase ,skin and connective tissue diseases ,Cell Proliferation ,Glucuronidase ,Brain Neoplasms ,CD24 ,CD24 Antigen ,Heparan sulfate ,medicine.disease ,Oncology ,chemistry ,030220 oncology & carcinogenesis ,Disease Progression ,Cancer research ,Heterografts ,Female ,Carcinogenesis ,Signal Transduction - Abstract
Heparanase is an endo-β-d-glucuronidase that cleaves heparan sulfate (HS) side chains of heparan sulfate proteoglycans. Compelling evidence tie heparanase levels with all steps of tumor formation including tumor initiation, growth, metastasis and chemo-resistance, likely involving augmentation of signaling pathways and gene transcription. In order to reveal the molecular mechanism(s) underlying the protumorigenic properties of heparanase, we established an inducible (Tet-on) system in U87 human glioma cells and applied gene array methodology in order to identify genes associated with heparanase induction. We found that CD24, a mucin-like cell adhesion protein, is consistently upregulated by heparanase and by heparanase splice variant devoid of enzymatic activity, whereas heparanase gene silencing was associated with decreased CD24 expression. This finding was further substantiated by a similar pattern of heparanase and CD24 immunostaining in glioma patients (Pearson's correlation; R = 0.66, p = 0.00001). Noteworthy, overexpression of CD24 stimulated glioma cell migration, invasion, colony formation in soft agar and tumor growth in mice suggesting that CD24 functions promote tumor growth. Likewise, anti-CD24 neutralizing monoclonal antibody attenuated glioma tumor growth, and a similar inhibition was observed in mice treated with a neutralizing mAb directed against L1 cell adhesion molecule (L1CAM), a ligand for CD24. Importantly, significant shorter patient survival was found in heparanase-high/CD24-high tumors vs. heparanase-high/CD24-low tumors for both high-grade and low-grade glioma (p = 0.02). Our results thus uncover a novel heparanase-CD24-L1CAM axis that plays a significant role in glioma tumorigenesis.
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- 2019
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39. Low-risk gestational trophoblastic neoplasia outcome after treatment with VMP regimen from 2005 to 2017
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Ying Zhou, Xuefen Zhang, Juan Wang, Hanyuan Liu, Lili Qian, Weiguo Song, Dabao Wu, Zhen Shen, Ying Wei, and Chenchen Zhu
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Adult ,Vincristine ,medicine.medical_specialty ,medicine.medical_treatment ,Antineoplastic Agents ,lcsh:Gynecology and obstetrics ,Gastroenterology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Pregnancy ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,Chorionic Gonadotropin, beta Subunit, Human ,Nedaplatin ,Gestational Trophoblastic Disease ,lcsh:RG1-991 ,Retrospective Studies ,Cisplatin ,Chemotherapy ,030219 obstetrics & reproductive medicine ,business.industry ,Remission Induction ,Obstetrics and Gynecology ,Carboplatin ,Regimen ,Methotrexate ,Treatment Outcome ,chemistry ,Toxicity ,Female ,business ,medicine.drug - Abstract
Objective: To evaluate the efficacy and toxicity of VMP regimen applied to the patients with low-risk gestational trophoblastic neoplasia (LR-GTN) treated in Anhui provincial hospital. Materials and methods: Between 2005 and 2017, 87 patients with low-risk gestational trophoblastic neoplasia received VMP regimen, consisted of vincristine (VCR), methotrexate (MTX) and platinum (cisplatin, carboplatin or nedaplatin), 68 of whom received VMP as their first-line chemotherapy, and 19 methotrexate-failed patients received VMP regimen as their second-line chemotherapy. The staging and scoring system was based on International Federation of Gynecology and Obstetrics (FIGO 2000) criteria. We describe and analyze their baseline characteristics, remission/resistance/recurrence rates, adverse reactions and prognosis. Results: The first-line VMP protocol can achieve an 83.8% remission rate and it tended to develop resistance when the pretreatment β-hCG reaches 7503.5 IU/L, and can achieve complete remission with FAV and EMA-CO as the salvage regimen. Among the 19 methotrexate-failed patients, 2 of whom were yet resistant to VMP regimen, followed by several courses of salvage chemotherapy such as FAV and EMP, and achieved 89.5% remission rate in second-line VMP group. Resistance to this regimen was obviously related with higher pre-treatment HCG whether used as primary or salvage treatment. Severe myelosuppression (grade 3 or 4) was shown in 4 (5.9%) of 68 cases, of which none was grade 4. Conclusion: For patients diagnosed with LR-GTN VMP regimen was a safe and effective treatment with a high rate of remission. Keywords: Low-risk gestational trophoblastic neoplasia, Vincristine, Methotrexate, Platinum, Efficacy
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- 2019
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40. High-Performance Thin-Layer Chromatographic Fingerprints of Triterpenoids for Distinguishing Between Isodon lophanthoides and Isodon lophanthoides var. gerardianus
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Shao-Ping Li, Mei-Ting Liu, Chao-Zhan Lin, Chenchen Zhu, Run-Jing Zhang, Jing Zhao, and Fangle Liu
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Pharmacology ,Plant Components ,Hptlc fingerprint ,Traditional medicine ,010405 organic chemistry ,010401 analytical chemistry ,Chemical distribution ,Biology ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,Rapid identification ,Triterpenoid ,Thin layer chromatographic ,Environmental Chemistry ,Agronomy and Crop Science ,Isodon lophanthoides ,Food Science - Abstract
Background: The aerial parts of Isodon lophanthoides (Buch. Ham. ex D. Don) Hara (IL) has been officially recorded as Isodonis lophanthoidis herba by many provincial quality control standards for Chinese herbal medicines in China. Recently, it has been found that one of its varieties, I. lophanthoides var. gerardianus (Benth.) Hara (ILVG) was pretended to be I. lophanthoidis herba in herbal material markets or cultivated bases. Because of the similarity on appearance, these two close-related species were difficult to be identified by morphological characters, especially when they are dried and sliced. Objective: To establish a rapid and specific method for identification of the two herbal medicines. Method: In this paper, a fingerprint of triterpenoids by HPTLC coupled with a digital profiling was established to identify IL and distinguish it from its substitute, ILVG. The specific HPTLC fingerprints constructed by determining twelve batches of IL samples and thirteen batches of ILVG samples, intuitionally reflected the difference between the two species on HPTLC image and the peak-peak rations of chemical distribution. Results: Authentication results of nine batches of commercial samples by the above established HPTLC fingerprints exhibited coincident conclusion with that by morphological means. Conclusions: The HPTLC fingerprint is proven to be simple, repeatable, specific, and suitable for rapid identification of I. lophanthoidis herba. Highlights: An efficient method for identification and distinguishing Isodon lophanthoides from its substitute, I. lophanthoides var. gerardianus, was established. HPTLC fingerprints of ursane-type triterpenoides were constructed and validated by determining IL and ILVG samples.
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- 2019
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41. Integrating metabolomics and network pharmacology to reveal the mechanisms of Delphinium brunonianum extract against nonalcoholic steatohepatitis
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Kaihui, Zhang, Yue, Yuan, Zeren, Dawa, Fangle, Liu, Yufeng, Yao, Meiqi, Wang, Chenchen, Zhu, and Chaozhan, Lin
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Pharmacology ,Mice ,Non-alcoholic Fatty Liver Disease ,Drug Discovery ,Animals ,Metabolomics ,Arachidonic Acids ,Delphinium ,Network Pharmacology ,Drugs, Chinese Herbal - Abstract
Herba Delphinii Brunoniani, a Tibetan Material Medica, derived from the aerial parts of Delphinium brunonianum Royle, possesses efficacy of cooling blood to remove apthogentic heat, and dispelling wind to arrest itching, and has been used for the treatment for liver disease according to Tibetan Medicine Theories in Shel Gong Shel Phreng. However, the mechanisms of action remain unclear.This work aimed to investigate the efficacy mechanism of Delphinium brunonianum extract (DBE) on nonalcoholic steatohepatitis (NASH), a kind of liver disease by integrating serum metabolomics and network pharmacology analysis.In this study, NASH model mice were established by a high-fat diet. The indexes of lipid accumulation, insulin resistance, and inflammatory reaction were used to evaluate the efficacy of DBE. A combination of UHPLC-QTOF-MS based metabolomics and network pharmacology was established to illustrate the serum biomarkers of NASH mice and to demonstrate the anti-NASH mechanisms of DBE. Serum metabolomics demonstrated potential metabolites and the corresponding metabolic pathways in the efficacy of DBE. Network pharmacology screened the targets of DBE against NASH. Finally, the mechanisms of DBE against NASH were verified by in-vivo pharmacology.Metabolomics revealed that DBE significantly regulated the abnormal levels of twenty-two metabolites, which involved the biosynthesis of unsaturated fatty acids and steroid hormone, linoleic acid metabolism, arachidonic acid metabolism, and alpha-Linolenic acid metabolism pathways. Network pharmacology showed that DBE exhibited anti-NASH effects through regulating the targets of PTGS2, PLA2, ALOX5, ALOX15, FASN, and CYP450. Finally, united pharmacological verification result, we found that the mechanisms of DBE against NASH may be related to the regulation of the unsaturated fatty acids biosynthesis and the arachidonic acid metabolism pathway.Integrating serum metabolomic and network analysis, we found that DBE might inhibit the pathological process of NASH by regulating the relative targets and the metabolic pathways, which may be a potential mechanism for the anti-NASH efficacy of DBE. This integrated strategy also provided a rational way for revealing the pharmacodynamic mechanisms of multi-components, multi-targets, and multi-pathways in Traditional Chinese Medicine (TCM).
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- 2022
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42. Inhibition effect of aluminum dust explosions by one novel zinc borate
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Tianjiao Zhang, Haipeng Jiang, Kai Zhang, Chenchen Zhu, Chenlu Xue, Zongling Zhang, Jintao Xu, and Wei Gao
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Applied Mathematics ,General Chemical Engineering ,General Chemistry ,Industrial and Manufacturing Engineering - Published
- 2022
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43. Simultaneous qualitative and quantitative evaluation of Toddalia asiatica root by using HPLC-DAD and UPLC-QTOF-MS/MS
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Lei Zhang, Ren Zhang, Pinqing Wei, Yuan Zhou, Mingjuan Zhu, Chenchen Zhu, Qian Peng, and Shengying Qin
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Plant Science ,Tandem mass spectrometry ,Plant Roots ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,Chemometrics ,chemistry.chemical_compound ,Alkaloids ,Coumarins ,Limit of Detection ,Tandem Mass Spectrometry ,Chromatography detector ,Drug Discovery ,Partial least squares regression ,Hydroxybenzoates ,Cluster Analysis ,heterocyclic compounds ,Rutaceae ,Chromatography, High Pressure Liquid ,Flavonoids ,Principal Component Analysis ,Chromatography ,Chemistry ,010401 analytical chemistry ,Discriminant Analysis ,Reproducibility of Results ,General Medicine ,Phenolic acid ,Reference Standards ,Coumarin ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Complementary and alternative medicine ,Principal component analysis ,Molecular Medicine ,Spectrophotometry, Ultraviolet ,Quantitative analysis (chemistry) ,Food Science - Abstract
Introduction Coumarin and alkaloids are the major bioactive constituents of Toddalia asiatica, playing an important role in various biological activities such as anti-inflammatory, analgesic, anti-bacterial and anti-tumour. Objective To establish a method that will simultaneously determine the coumarins and alkaloids compounds in T. asiatica and identify their characteristic fragmentation patterns, while combining fingerprints and chemical identification with chemometrics for discrimination and quality assessment of T. asiatica samples. Methodology Qualitative characterisation of coumarins and alkaloids compounds in the methanol extracts of T. asiatica was determined by ultra-high-performance liquid chromatography-quadrupole time-of-flight tandem mass spectrometry (UPLC-QTOF-MS/MS). Quantitative analysis relies on high-performance liquid chromatography with a diode array detector (HPLC-DAD). Results A total of 59 components were characterised by UPLC-QTOF-MS/MS, including 29 coumarin, 25 alkaloids, one phenolic acid and four flavonoids. While the 19 characteristic components out of 23 common peaks in the chromatographic fingerprints of T. asiatica were confirmed. Quantitative analysis of seven major compounds from 18 samples were simultaneously detected by HPLC-DAD at wavelengths of 280 nm. The samples were classified into three groups by hierarchical clustering analysis (HCA) combined with principal component analysis (PCA), and orthogonal partial least squares discriminant analysis (OPLS-DA) which screened out the main chemical markers responsible for the samples differences. Conclusion Fingerprints combined with chemometrics and chemical identification are a simple, rapid and effective method for the quality control of T. asiatica.
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- 2018
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44. Effects of Nervilia fordii Extract on Pulmonary Fibrosis Through TGF-β/Smad Signaling Pathway
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Yuanyuan Xie, Fangle Liu, Zenghui Lu, Meiqi Wang, Yue Yuan, Chenchen Zhu, Chao-Zhan Lin, Yufeng Yao, and Yunxia Ma
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0301 basic medicine ,RM1-950 ,Pharmacology ,Lung injury ,Bleomycin ,03 medical and health sciences ,Idiopathic pulmonary fibrosis ,Hydroxyproline ,chemistry.chemical_compound ,0302 clinical medicine ,In vivo ,Pulmonary fibrosis ,medicine ,Pharmacology (medical) ,Original Research ,Lung ,pulmonary fibrosis ,Nervilia fordii ,medicine.disease ,TGF-β/Smad signaling pathway ,CTGF ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,effective substances and mechanism ,030220 oncology & carcinogenesis ,Therapeutics. Pharmacology ,Network pharmacology analysis - Abstract
Idiopathic pulmonary fibrosis (IPF) is a progressive and irreversible interstitial pulmonary disease with a poor prognosis. The extract of Nervilia fordii (NFE) has shown remarkable benefit in the treatment of acute lung injury, lung cancer, and severe acute respiratory syndrome (SARS). However, the potential mechanism and efficacy of NFE in the treatment of IPF remain unknown. In this study, a systematic network pharmacology analysis was used to predict the mechanism and efficacy of NFE in the treatment of IPF, based on the major components of NFE elucidated by UPLC-TOF-MS/MS. The potential molecular interactions between the compounds and potential targets were predicted using molecular docking. In vivo, rats with pulmonary fibrosis induced by a single intratracheal injection of bleomycin (BLM) were orally administered NFE for 14 days. Lung index and biochemical levels were determined, and histopathological analysis using hematoxylin and eosin (H&E) and Masson staining was performed. The effects of NFE on fibroblast proliferation in Lipopolysaccharide (LPS) and TGF-β1-induced mouse 3T6 fibroblasts were evaluated in vitro. In total, 20 components were identified in NFE, and 102 potential targets for IPF treatment were predicted. These targets potentially participate in processes regulated by transmembrane receptor protein tyrosine kinase, ERBB2, and et al. Molecular docking results predicted high affinity interactions between three components (rhamnazin, rhamnetin, and rhamnocitrin) and the potential targets, suggesting that TGF-β is the most important potential target of NFE in the treatment of pulmonary fibrosis. NFE significantly decreased the lung index and alleviated BLM-induced pulmonary fibrosis in rats. Histopathological observation of lung tissues showed that NFE alleviated inflammation and collagen deposition in BLM-induced rats. NFE inhibited the migration of LPS- and TGF-β1-induced 3T6 fibroblasts, reduced the contents of hydroxyproline and collagen, and contributed to anti-inflammation and anti-oxidation. With the intervention of NFE, the protein and RNA expression of TGF-β1, a-SMA, Smad3/4, p-Smad3/4, CTGF, and p-ERK1/2 were significantly downregulated, while Smad7 and ERK1/2 were upregulated significantly in vivo and in vitro. These findings indicated that NFE may exert therapeutic effects on pulmonary fibrosis by alleviating inflammation, oxidation, and collagen deposition. The mechanism related to the inhibition of the TGF-β/Smad signaling pathway.
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- 2021
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45. Single-molecule, full-length transcript isoform sequencing reveals disease-associated RNA isoforms in cardiomyocytes
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Chenchen Zhu, Wu Wei, Benjamin Meder, Han Sun, Jingyan Wu, Francesca Briganti, and Lars M. Steinmetz
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Gene isoform ,Cardiomyopathy, Dilated ,RNA splicing ,Science ,Induced Pluripotent Stem Cells ,General Physics and Astronomy ,Muscle Proteins ,Computational biology ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,Cell Line ,Transcriptome ,Mitochondrial Proteins ,03 medical and health sciences ,Exon ,0302 clinical medicine ,RNA Isoforms ,Complementary DNA ,Humans ,Myocytes, Cardiac ,RNA-Seq ,Gene ,030304 developmental biology ,Gene Editing ,0303 health sciences ,Multidisciplinary ,Alternative splicing ,RNA-Binding Proteins ,Cell Differentiation ,Molecular Sequence Annotation ,General Chemistry ,Phenotype ,Alternative Splicing ,Mutation ,Feasibility Studies ,Gene expression ,CRISPR-Cas Systems ,Cardiomyopathies ,human activities ,030217 neurology & neurosurgery ,RNA, Guide, Kinetoplastida - Abstract
Alternative splicing generates differing RNA isoforms that govern phenotypic complexity of eukaryotes. Its malfunction underlies many diseases, including cancer and cardiovascular diseases. Comparative analysis of RNA isoforms at the genome-wide scale has been difficult. Here, we establish an experimental and computational pipeline that performs de novo transcript annotation and accurately quantifies transcript isoforms from cDNA sequences with a full-length isoform detection accuracy of 97.6%. We generate a searchable, quantitative human transcriptome annotation with 31,025 known and 5,740 novel transcript isoforms (http://steinmetzlab.embl.de/iBrowser/). By analyzing the isoforms in the presence of RNA Binding Motif Protein 20 (RBM20) mutations associated with aggressive dilated cardiomyopathy (DCM), we identify 121 differentially expressed transcript isoforms in 107 cardiac genes. Our approach enables quantitative dissection of complex transcript architecture instead of mere identification of inclusion or exclusion of individual exons, as exemplified by the discovery of IMMT isoforms mis-spliced by RBM20 mutations. Thereby we achieve a path to direct differential expression testing independent of an existing annotation of transcript isoforms, providing more immediate biological interpretation and higher resolution transcriptome comparisons., Alternative splicing generates RNA isoforms that contribute to phenotypic diversity. Here the authors perform single-molecule full-length RNA sequencing to identify disease-associated variant transcript isoforms.
- Published
- 2021
46. Semantic Relation Reasoning for Shot-Stable Few-Shot Object Detection
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Fangyi Chen, Chenchen Zhu, Marios Savvides, Zhiqiang Shen, and Uzair Ahmed
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FOS: Computer and information sciences ,Class (computer programming) ,Relation (database) ,Heuristic ,Computer science ,business.industry ,Computer Vision and Pattern Recognition (cs.CV) ,Computer Science - Computer Vision and Pattern Recognition ,Pattern recognition ,Semantics ,Object detection ,Visualization ,Embedding ,Artificial intelligence ,business ,Protocol (object-oriented programming) - Abstract
Few-shot object detection is an imperative and long-lasting problem due to the inherent long-tail distribution of real-world data. Its performance is largely affected by the data scarcity of novel classes. But the semantic relation between the novel classes and the base classes is constant regardless of the data availability. In this work, we investigate utilizing this semantic relation together with the visual information and introduce explicit relation reasoning into the learning of novel object detection. Specifically, we represent each class concept by a semantic embedding learned from a large corpus of text. The detector is trained to project the image representations of objects into this embedding space. We also identify the problems of trivially using the raw embeddings with a heuristic knowledge graph and propose to augment the embeddings with a dynamic relation graph. As a result, our few-shot detector, termed SRR-FSD, is robust and stable to the variation of shots of novel objects. Experiments show that SRR-FSD can achieve competitive results at higher shots, and more importantly, a significantly better performance given both lower explicit and implicit shots. The benchmark protocol with implicit shots removed from the pretrained classification dataset can serve as a more realistic setting for future research., Comment: CVPR 2021
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- 2021
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47. Additional file 1 of Clinical characteristics and prognosis of ovarian clear cell carcinoma: a 10-year retrospective study
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Chenchen Zhu, Zhu, Jing, Qian, Lili, Hanyuan Liu, Shen, Zhen, Dabao Wu, Weidong Zhao, Weihua Xiao, and Zhou, Ying
- Abstract
Additional file 1: sTable1. Clinical characteristics of patients with/without endometriosis. a. Mean ± standard deviation, range; NA. Not available. sTable2. The treatment and survival outcomes of the 14 patients with OCCC who had a recurrence. sTable3. The prognostic outcomes of patients with OCCC at the stage of IC. sTable4. The comparison of survival time between patients with OCCC at stage IC1 and IC2/3. sTable5. Multivariate analysis of factors associated with overall survival among patients at early stage (n = 37). a. Based on 5000 bootstrap samples. b. Interval. The interval of initial postoperative chemotherapy (days). ASA: American Society of Anesthesiologists class; SCS: Surgical complexity score. sTable6. Multivariate analysis of factors associated with overall survival among patients at advanced stage (n = 12). a. Based on 5000 bootstrap samples. b. Interval. The interval of initial postoperative chemotherapy (days). ASA: American Society of Anesthesiologists class; SCS: Surgical complexity score. sTable7. Power calculation and multiple hypothesis correction of the analysis of overall survival among the 49 patients with OCCC at early and advanced stage. sTable8. Power calculation and multiple hypothesis correction of the analysis of progression free survival among the 49 patients with OCCC at early and advanced stage.
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- 2021
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48. 314 Clinical characteristics and prognosis of ovarian clear cell carcinoma: a 10-year retrospective study
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Ying Zhou, Qingqing Zhou, Shuangfeng Chen, Sisi Deng, Jing Zhu, Hanyuan Liu, Luwen Liu, and Chenchen Zhu
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Oncology ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Endometriosis ,Retrospective cohort study ,medicine.disease ,Chemotherapy regimen ,Cancer registry ,Internal medicine ,Clear cell carcinoma ,medicine ,Lymphadenectomy ,Stage (cooking) ,business ,Survival analysis - Abstract
Introduction/Background Ovarian clear cell carcinoma (OCCC) is a special subtype of epithelial ovarian carcinoma with unique characteristics and no specific tumour markers. Due to the inherent chemoresistance, there are no effective chemotherapy regimen for OCCC, resulting in the extremely poor prognosis of patients, especially at advanced stage. Therefore, the purpose of our research is to investigate the clinical characteristics and outcomes of ovarian clear cell carcinoma (OCCC) and to provide additional supporting evidence to aid in the clinical diagnosis and management. Methodology This was a retrospective study investigating the clinical characteristics and survival outcomes of 87 patients with OCCC treated at The First Affiliated Hospital of University of Science and Technology of China (USTC), between January 2010 and March 2020. Survival analysis was also performed on 179 patients with OCCC diagnosed between 1975 and 2017, obtained from the Surveillance, Epidemiology and End Results (SEER) cancer registry database. Results The median age of study participants was 49.28 ± 9.8 years old, with 74.71% diagnosed at an early stage. Median CA125 level was 607.26 IU/mL, with 23.94% having a normal CA125 level. 16 patients (18.39%) had co-existing endometriosis and 8 patients (9.2%) had a preoperative history or developed postoperative complications of venous thromboembolism (VTE). Surgical staging procedures were performed on 65 patients and cytoreduction was performed on 22 patients, among whom 17 patients received optimal cytoreduction. 67 patients (77.01%) underwent lymphadenectomy, and only 3 (4.48%) were found to have positive lymph nodes. Positive HNF1β, and negative WT-1, ER, and PR are reliable immunohistochemical indicators of OCCC. Patients diagnosed at an early stage had higher 3-year overall survival (OS) (89.47% vs. 44.44%) and progression-free survival (PFS) rates (78.95% vs. 22.22%) than those with advanced stage OCCC at diagnosis. CA199 (P = 0.025) and ascites (P = 0.001) were significantly associated with OS, while HE4 (P = 0.027) and ascites (P = 0.001) were significantly associated with PFS. Analysis of data from the SEER database showed that the presence of positive lymph nodes is also an independent prognostic factor for OS (P = 0.001). Conclusion OCCC often presents at an early stage and young age with a mild elevation in CA125 level. CA199, HE4, massive ascites and positive lymph node are independent prognostic factors for overall survival in OCCC. Disclosures This work was supported by the National Natural Science Foundation of China (81872110, 81902632), National Key Research and Development Program (2018YFC1003900), Anhui Provincial Key Research and Development Program (1704a0802151). The funders had no role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. No conflicts of interest to disclose.
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- 2020
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49. Longitudinal interactions between levels of serum cytokine and the microbiome from four body sites
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Xin Zhou, Xiaotao Shen, Jethro Johnson, Daniel J Spakowicz, Chenchen Zhu, Wenyu Zhou, Yanjiao Zhou, George Weinstock, and Michael Snyder
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Immunology ,Immunology and Allergy - Abstract
The human body is co-habituated with trillions of microbes, which are actively interacting with the human immune system. Our previous study demonstrated that a subset of individuals, characterized by a chronic absence of serum Interleukin (IL)-17 and IL-22, is more likely to be resistant to insulin compared with individuals with detectable serum IL-17/IL-22. Additional analysis pointed out that such an absence of IL-17 and IL-22 is associated with the low abundance of the gut microbiome that belongs to the class of Clostridia. To better understand the interactions between serum cytokines and microbiome, we curated a dataset from the iHMP that contains 86 individuals with a study duration from 5 months to 6 years, whose microbiome has been characterized from four body sites include: stool (n=927), skin (n=1128), nasal (922), oral (n=1001). Their serum cytokines had been characterized using 62-plex Luminex antibody-conjugated bead capture assay. The longitudinal interaction between microbiome abundance and serum cytokine are modeled by Bayesian Mixed-Effects Model, and the interaction between microbiome richness and serum cytokine are modeled by Linear Mixed Models. We found the interactions are strongest in the gut compared to the other three body sites, but it is highly territory specific. For example, Moraxella from the skin is negatively correlated with multiple cytokines, but not Moraxella from the nasal. Among all cytokines, IL-1 signaling is the strongest modulator of microbiome abundance in all four body sites, but LEPTIN and GMCFS are more potent when focused on richness. Our results indicate that the immune regulation of the microbiome is active on multiple body sites, and such interaction is genera and cytokine specific. This work was supported by the National Institutes of Health Common Fund Human Microbiome Project (HMP) (1U54DE02378901). Dr. Xin Zhou received support from the Stanford Aging and Ethnogeriatrics (SAGE) Research Center under NIH/NIA grant P30AG059307. The SAGE Center is part of the Resource Centers for Minority Aging Research (RCMAR) Program led by the National Institute on Aging (NIA) at the National Institutes of Health (NIH). Its contents are solely the responsibility of the authors and does not necessarily represent the official views of the NIA or the NIH.
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- 2022
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50. Diterpenoid Alkaloids Isolated from Delphinium brunonianum and Their Inhibitory Effects on Hepatocytes Lipid Accumulation
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Huanhuan Ma, Yunxia Ma, Zeren Dawa, Yufeng Yao, Meiqi Wang, Kaihui Zhang, Chenchen Zhu, Fangle Liu, and Chaozhan Lin
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Delphinium brunonianum ,diterpenoid alkaloids ,lipid accumulation ,Chemistry (miscellaneous) ,Organic Chemistry ,Drug Discovery ,Molecular Medicine ,Pharmaceutical Science ,Physical and Theoretical Chemistry ,Analytical Chemistry - Abstract
This research aimed to excavate compounds with activity reducing hepatocytes lipid accumulation from Delphinium brunonianum. Four novel diterpenoid alkaloids, brunodelphinine B–E, were isolated from D. brunonianum together with eleven known diterpenoid alkaloids through a phytochemical investigation. Their structures were elucidated by comprehensive spectroscopy methods including HR-ESI-MS, NMR, IR, UV, CD, and single-crystal X-ray diffraction analysis. The inhibitory effects of a total of 15 diterpenoid alkaloids on hepatocytes lipid accumulation were evaluated using 0.5 mM FFA (oleate/palmitate 2:1 ratio) to induce buffalo rat liver (BRL) cells by measuring the levels of triglyceride (TG), total cholesterol (TC), alanine transaminase (ALT), aspartate transaminase (AST), and the staining of oil red O. The results show that five diterpenoid alkaloids—brunodelphinine E (4), delbruline (5), lycoctonine (7), delbrunine (8), and sharwuphinine A (12)—exhibited significant inhibitory effects on lipid accumulation in a dose-dependent manner and without cytotoxicity. Among them, sharwuphinine A (12) displayed the strongest inhibition of hepatocytes lipid accumulation in vitro. Our research increased the understanding on the chemical composition of D. brunonianum and provided experimental and theoretical evidence for the active ingredients screened from this herbal medicine in the treatment of the diseases related to lipid accumulation, such as non-alcoholic fatty liver disease and hyperlipidemia.
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- 2022
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