1. Understanding gene functions and disease mechanisms: Phenotyping pipelines in the German Mouse Clinic
- Author
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Annemarie Zimprich, Manuel Miller, Holger Maier, Raffi Bekeredjian, Thomas Klopstock, Martin Kistler, Markus Ollert, Markus Brielmeier, Ali Önder Yildirim, Oana V. Amarie, Claudia Stöger, Sabine M. Hölter, Kristin Moreth, Patricia da Silva Buttkus, Yi-Li Cho, Carsten B. Schmidt-Weber, Markus J. Kraiger, Tobias Stöger, Lillian Garrett, Philipp Mayer-Kuckuk, Andreas Zimmer, Angelika Scheideler, Martin Hrabě de Angelis, Martin Klingenspor, Moya Wu, Johannes Beckers, Juan Antonio Aguilar-Pimentel, Wolfgang Wurst, Stefanie Leuchtenberger, Irina Treise, Lore Becker, Christine Hutterer, Birgit Rathkolb, Eckhard Wolf, Valerie Gailus-Durner, Martin Irmler, Jan Rozman, Julia Calzada-Wack, Dirk H. Busch, Kristine Gampe, and Helmut Fuchs
- Subjects
0301 basic medicine ,Disease mechanisms ,Mouse Phenotyping ,Phenotyping Pipeline ,Mouse Model ,Gene Function Analysis ,Mice, Transgenic ,Disease ,Computational biology ,Biology ,Bioinformatics ,language.human_language ,Mice transgenic ,Mouse model ,German ,03 medical and health sciences ,Behavioral Neuroscience ,Disease Models, Animal ,030104 developmental biology ,Phenotype ,Phenotyping pipeline ,language ,Animals ,Humans ,Gene function analysis ,ddc:610 ,Mouse phenotyping - Abstract
Since decades, model organisms have provided an important approach for understanding the mechanistic basis of human diseases. The German Mouse Clinic (GMC) was the first phenotyping facility that established a collaboration-based platform for phenotype characterization of mouse lines. In order to address individual projects by a tailor-made phenotyping strategy, the GMC advanced in developing a series of pipelines with tests for the analysis of specific disease areas. For a general broad analysis, there is a screening pipeline that covers the key parameters for the most relevant disease areas. For hypothesis-driven phenotypic analyses, there are thirteen additional pipelines with focus on neurological and behavioral disorders, metabolic dysfunction, respiratory system malfunctions, immune-system disorders and imaging techniques. In this article, we give an overview of the pipelines and describe the scientific rationale behind the different test combinations.
- Published
- 2017
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