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The transient receptor potential melastatin 4 (TRPM4) ion channel is ubiquitously expressed. Dysregulation and/or functional mutations of TRPM4 lead to several diseases. Within our studies, we screened for TRPM4 inhibitors and identified small molecules that block TRPM4 in the low µM range. Furthermore, we investigated the pathophysiology of TRPM4 in cardiac conditions, immune diseases and cancer using these novel inhibitors, molecular biology techniques and functional assays.

The 5-HT3 receptor is one of several ion channels responsible for the transmission of nerve impulses in the peripheral and central nervous systems. Until now, it has been difficult to characterize transmembrane receptors with classical structural biology approaches like X-ray crystallography. The use of photoaffinity probes is an alternative approach to identify regions in the protein where small molecules bind. To this end, we present two photoaffinity probes based on granisetron, a well known antagonist of the 5-HT3 receptor. These new probes show nanomolar binding affinity for the orthosteric binding site. In addition, we investigated their reactivity using irradiation experiments.

Ion channels are transmembrane protein complexes that are found in virtually all cells. They fulfill a crucial physiological function by facilitating communication between and within cells. Consequently, impaired channel function, e.g. due to mutations, often has profound physiological effects. Their central role in cell-to-cell communication makes ion channels formidable drug targets, albeit their transmembrane nature often hampers efforts to obtain high resolution structures and hence impedes drug discovery. Decades of electrophysiology and molecular biology studies have made critical contributions to our understanding of ion channel structure and function. Small organic compounds, acting as either agonist or antagonist, have played vital roles in such studies and in recent years these molecular tools have become more sophisticated. Decorated with fluorescent, photoaffinity and/or affinity tags small molecular tools enable imaging, binding site mapping and isolation of biomolecular targets. Here, some of the methodologies employed in the context of ion channels are discussed and highlighted with representative examples.