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Heavy metals contamination of soil is a recurrent issue in terrestrial ecosystems that are polluted by consequences of process particles augmented by metals and metalloids, including industrial activities. Consequently, we investigated the distribution between the levels of heavy metals in soils and tissues of earthworm species from metal-related occupational sites. Texturally, the soils were classified as sandy-loam, while, the metals level across different sampling locations followed a decreasing trend; Zn > Cr > Cu > Fe > Pb > Ni > Cd and found above the threshold limits. The highest concentrations of Zn (205.7 mg/kg) and Cu (145.8 mg/kg) are found in L1 whereas the levels of Cr and Cd vary somewhat between sites, with Ni and Fe values highest in L2. The earthworm species identified were L. terrestris, E. eugeniae, A. millsoni, P. obiensis, and L. violaceous with the highest metal level (Zn) in L. terrestris. The metals BF proceeds in Cr > Cd > Cu > Fe > Ni > Zn > Pb with a fitted relationship between the metals’ concentration and soil properties with earthworms. Therefore, it could be demonstrated that the discharge and distribution of heavy metal into soil biota was observed, possibly generated by the metal-related works. [ABSTRACT FROM AUTHOR]

Overusing pesticides to increase crop productivity is a global problem that harms ecosystems and can adversely affect human health. Therefore, low-cost, simple, and easy-to-use pesticide biomonitoring methods are needed to assess the impact of these products on the environment. In this study, we employed the root development of soybean (Glycine max (L.) Merrill) RR (Roundup® resistant) and sesbania (Sesbania virgata (Cav.) Pers) as bioindicators to evaluate the impact of irrigation water containing three distinct commercial pesticides (herbicide, fungicide, and insecticide). The hermetic response was observed for lower doses of methomyl. A significant reduction in root length was consistently observed in both soybean and sesbania plants when treated with glyphosate, difenoconazole, and methomyl. The dose-dependent change in root length suggests a straightforward alternative to monitoring pesticide levels in water-based solutions. Furthermore, the effects of these chemical agents on plants, even when present in low quantities, may clarify their implications for the environment and crop production. [ABSTRACT FROM AUTHOR]

Surrogate groups are used to find indicator groups and are a fast and effective way to assess biodiversity. For a surrogate group to be efficient, it needs to have strong congruence between different or similar groups. Understanding the surrogate groups in this area with high deforestation rates is extremely important to avoid or minimize the loss of biodiversity, which is severely threatened. The objective was to evaluate the congruence between fish assemblages, Heteroptera, and Odonata in streams in the Amazon–Cerrado transition area. The results showed weak congruence between Odonata and Heteroptera for both data sets. Discordant Odonata and fish showed weak but significant congruence with the abundance data, and with the incidence data the congruence was not significant. A similar result was obtained in the analysis of fish and Heteroptera, which were not congruent with any of the data sets used. The variance partition test, with abundance data, showed that both environmental and spatial variations are responsible for structuring the Heteroptera community, diverging from fish and Odonata did not respond to any of the variations verified, with incidence and abundance data, showing no relationship with environmental and spatial variations. Suggesting Odonata as a surrogate group for this region. [ABSTRACT FROM AUTHOR]

Potentially toxic elements (PTEs) and microplastics (MPs) in the atmosphere raise widespread apprehension due to their association with the ecosystem and public health. The accumulation of airborne MPs and PTEs was analyzed in Polyalthia longifolia leaves, and the Pollution Index (PI) was calculated along an industrial, residential, and rural gradient in Bangladesh. Only polyethylene terephthalate (PET) was found in the highest concentration in industrial areas compared to other areas. In leaves, a significantly higher Cd, Pb, and Zn concentration was found in industrial regions compared to residential and rural areas. For Cd, the PI was observed to be higher than 1 in rural areas, indicating a moderate level of pollution; it was higher than 3 in residential areas, showing considerable pollution; and it was found to be more than 6 in industrial areas. The higher concentration of both MPs and PTEs with increasing urbanization reflects the influence of anthropogenic activities. The findings of the study demonstrate the fascinating potential of P. longifolia tree leaves as a promising bioindicator for air quality biomonitoring. [ABSTRACT FROM AUTHOR]

Zooplankton are essential components of the aquatic food chain. Their density and composition are influenced by abundant of particular nutrients which promotes planktonic bloom. Domestic sewage is mostly anoxic to hypoxia in nature that favours largely pollution resistant species of zooplankton. The present study deals with the density, biochemical composition and gut microbes of Cladoceran (Moina macrocopa) from domestic sewage water monthly and seasonally. Hydrological parameters and zooplankton density in sewage water showed much variation in different seasons. The monthly variations of M. macrocopa density showed minimum (766.67 ± 152 Ind./L) during December 2019 and maximum (11,600.00 ± 360 Ind./L) during March 2020. Further, seasonal mean density was minimum during monsoon (1444.44 ± 185 Ind./L) and maximum during post-monsoon (9744.44 ± 725 Ind./L) showed distinct seasonal variations. Untreated sewage water in canal boost up solitary zooplankton M. macrocopa abundantly even in anoxic condition with optimum nutrients during the post-monsoon season. Total proteins and carbohydrates of M. macrocopa were maximum during post-monsoon and minimum during monsoon whereas total lipids were maximum during pre-monsoon and minimum during monsoon season. Present finding reveal that, M. macrocopa was found in untreated domestic sewage waste water solitarily in high density in different seasons. Physico-chemical parameters and availability of rich nutrients were the key factors which favouring high density and biochemical profiles of M. macrocopa. Further, abundant anaerobic coli form bacterial strains viz. Klebsiella pneumonia, Exiguobacterium profundum, Escherichia coli JSG and Escherichia coli JSG2 in gut of M. macrocopa indicates its preferred food in anoxic condition and reflect well adaptation in polluted environment. [ABSTRACT FROM AUTHOR]

Understanding macroalgal bloom development is crucial for managing eutrophication and protecting estuarine ecosystems. In this study, brown macroalgal blooms (i.e., golden tides) were identified in a potentially eutrophic temperate estuary (NW Ireland). Pylaiella littoralis (Phaeophyceae, Ectocarpales) was monitored at low tide over seven sampling occasions between June 2016 and August 2017. In situ biomass, tissue nutrients (nitrogen (N) and phosphorus (P)), and isotopic signature (δ15N contents) were measured, and relations with environmental drivers were explored. Difference Vegetation Index (NDVI) values from Sentinel-2 satellite imagery were used to assess the spatiotemporal dynamics of P. littoralis biomass (2016–2022). The results indicated that NDVI attributed to golden tides were lowest in 2022, during summer (coinciding with high temperatures and high rainfall) and at the lower shore on the right margin of an entering river. The highest tissue P content was recorded in April 2017, coinciding with in situ biomass peaks (spring–early summer), suggesting elevated P demand. Tissue N content (>2%) and N:P ratios (10–30) indicated occasional P limitation but no N limitation. δ15N data were very low and it was not possible to identify any primary N source. These findings highlight the importance of nutrient management in mitigating golden tides, addressing eutrophication, and preserving estuarine ecosystems. [ABSTRACT FROM AUTHOR]

The mangrove ecosystems in Bawean Island are degraded due to anthropogenic activities and land conversion. Plantation has been carried out periodically, and this has continued in several mangrove ecosystems. This study was conducted to evaluate the physicochemical water quality of several mangrove ecosystems on Bawean Island, as well as phytoplankton as bioindicators. The evaluation of mangroves in Bawean Island was carried out at 11 locations based on different naturalness and human activities surrounding. The physical and chemical parameters of water observed were air temperature, water temperature, pH, TSS, dissolved oxygen (DO), biochemical oxygen demand (BOD), salinity, conductivity, nitrate, and orthophosphate. Community structure and plankton diversity measured include the Importance Value Index (IVI), Shannon-Wiener diversity index (H'), Simpson dominance index (Id), evenness index (E), trophic diatom index (TDI), and pollution tolerant value (%PTV). The physical parameters of water chemistry show that it meets the quality standards based on Indonesian Government Regulation No. 22 of 2021, except for nitrate and orthophosphate, but it is still under plankton tolerant. A total of 63 species from 7 phytoplankton classes were found based on the importance value index. Based on the TDI index, mangrove ecosystems Sawahmulya, Sidogedungbatu, Hijau Daun, Pamona, Pasir Putih, Sungai Rujing, Bangsal, Jherat Lanjheng, and Lebak were classified as eutrophic while Pulau Cina and Dekatagung were hypereutrophic. Based on %PTV, the Hijau Daun mangrove is the best mangrove ecosystem, while other mangroves were classified as moderately and heavily polluted. [ABSTRACT FROM AUTHOR]

The Comarca Lagunera is one of Mexico's most important productive areas. Its main economic activities are livestock, agriculture, and the processing industry. A wide variety of industries emit wastes that are considered highly toxic environmental pollutants, which have strong negative impacts on public health. The objective of this work was to determine the lead concentrations present in tissues of pigeons (Columba livia) belonging to the urban area of the Comarca Lagunera, Mexico. Specimens were collected from the localities that comprise the region and the tissue extracted; the organs were dried, calcined, and diluted in an acidic HCl solution. Lead concentrations were obtained by atomic absorption spectrometry using the graphite furnace technique. The results demonstrate the presence of lead in all the tissues analyzed, with maximum concentrations of 191.14 mg/kg and minimum concentrations of 0.86 mg/kg, the area with the highest average concentration being Torreón, Coahuila (p = 0.030). The organ with the highest concentration was the bone (p = 0.000). Evidence of lead poisoning is presented in Columba livia tissues in the Comarca Lagunera, thus demonstrating the presence of this contaminant and the ability of these pigeons to function as bioindicators of environmental contamination. [ABSTRACT FROM AUTHOR]

The Yucatan aquifer sustains the people living in the Mayan forest and its associated fauna. Human activities threaten water quality and the environmental services associated with it. To assess the eukaryotic microalgae community structure as a bioindicator of water quality, we employed a combined approach of microscopic and shotgun metagenomics to identify specific genera associated with shifts in physicochemical parameters in three permanent lagoons located in Campeche, Mexico. We could identify highly complex and diverse communities independent of human activity intensity, harboring an average of 362 genera at each lagoon. Of those, 85 were affected by alkalinity, carbonates, water hardness, and cyanuric acid levels. Some genera, like Nannochloropsis and Thraustotheca, showed significant negative correlations with lead concentration. The functional annotation of genes revealed these communities' highly diverse metabolic capabilities and the pending work for extensive genomic characterization of rare clades. [ABSTRACT FROM AUTHOR]

Prokaryotes play a crucial role in marine ecosystem health and drive biogeochemical processes. The northern Ninety East Ridge (NER) of the Indian Ocean, a pivotal yet understudied area for these cycles, has been the focus of our study. We employed high-throughput 16S rRNA gene sequencing to analyze 35 water samples from five stations along the ridge, categorized into three depth- and dissolved oxygen-level-based groups. Our approach uncovered a clear stratification of microbial communities, with key bioindicators such as Prochlorococcus MIT9313, Sva0996 marine group, and Candidatus Actinomarina in the upper layer; Ketobacter, Pseudophaeobacter, Nitrospina, and SAR324 clade in the middle layer; and Methylobacterium-Methylorubrum, Sphingomonas, Sphingobium, and Erythrobacter in the deep layer. Methylobacterium-Methylorubrum emerged as the most abundant bacterial genus, while Nitrosopumilaceae predominated among archaeal communities. The spatial and depth-wise distribution patterns revealed that Ketobacter was unique to the northern NER, whereas Methylobacterium-Methylorubrum, UBA10353, SAR324 clade, SAR406, Sva0996_marine_group, Candidatus Actinomarina were ubiquitous across various marine regions, exhibiting niche differentiation at the OTU level. Environmental factors, especially dissolved oxygen (DO), silicate, nitrate, and salinity, significantly influence community structure. These findings not only reveal the novelty and adaptability of the microbial ecosystem in the northern NER but also contribute to the broader understanding of marine microbial diversity and its response to environmental heterogeneity. [ABSTRACT FROM AUTHOR]

A large number of water mites of the species Kawamuracarus elongatus Uchida, 1937 were found to accumulate on a water-filtering sieve in a drinking water treatment plant in Fukuoka, Japan. Such a situation probably could be caused by the temporal reduction of the dissolved oxygen in the filtration bed. Newly recognized morphological features of this species are noted based on the specimens collected in Fukuoka. Further, water mites discovered so far in water supply systems in Japan are reviewed, and more accurate information of water mites as organisms of water supplies is provided.

Winter oilseed rape (Brassica napus L.), the principal oilseed crop in Europe, is notably vulnerable to spring frosts that can drastically reduce yields in ways that are challenging to predict with standard techniques. Our research focused on evaluating the efficacy of photosynthetic efficiency analysis in this crop and identifying specific chlorophyll fluorescence parameters severely impacted by frost, which could serve as noninvasive biomarkers for yield decline. The experiments were carried out in semi-controlled conditions with several treatments: a control, one day at -3°C, three days at -3°C, one day at -6°C, and three days at -6°C. We employed continuous-excitation and pulse-amplitude-modulation chlorophyll fluorescence measurements to assess plant sensitivity to frost. Also, plant gas exchange and chlorophyll content index measurements were performed. Certain parameters strongly correlated with final yield losses, thereby establishing a basis for developing new agricultural protocols to predict and mitigate frost damage in rapeseed crops accurately.

Plastic, a product of industrialization, has become an integral part of human life since its inception. Its extensive usage has led to a drastic increase in production, resulting in the widespread accumulation of plastic waste at various levels. Improper disposal practices have compounded this issue, transforming plastic waste into a significant environmental concern. Factors such as the sheer volume of plastic generated, inadequate management, persistent accumulation, and fragmentation exacerbate this problem. Of particular concern is the prevalence of microplastics, tiny particles measuring less than 5mm, which have permeated various natural ecosystems and have been detected within living organisms. For example, bees, due to their foraging activities, inadvertently carry microplastics and associated contaminants on their bodies. This study aims to investigate the presence of microplastics in bees (Apis mellifera), utilizing them as indicators of microplastic pollution. Additionally, it seeks to determine whether there is a correlation between proximity to urban centers and the abundance of microplastics in bees sampled from selected apiaries. Employing fluorescence microscopy and FTIR Spectroscopy, the study analyzed a total of 54 samples collected from 9 participating apiaries within the designated area. Statistical analyses revealed that Gualaceo is not immune to microplastic contamination, with fibers and synthetic fragments detected in bee specimens. Furthermore, the study found an inverse relationship between distance from urban centers and the concentration of microplastics within beehives. To advance knowledge in this field, future research could explore the extent to which microplastics are integrated into bee products and their potential impact on living organisms. These findings underscore the urgent need for a shift in attitudes and actions at both individual and institutional levels, emphasizing the importance of proactive engagement in formulating and implementing effective environmental policies and engineering solutions.

Abstract The spatial patterns of planktonic ciliate communities were studied from May to June 2019 in the Nile Delta’s Damietta region, southeastern Mediterranean. The ciliate communities were sampled from twenty-five sites of five stressed domains with spatial gradients of environmental status. A total of 32 ciliate taxa with six dominant species were identified, comprising 21 tintinnids and 11 aloricate ciliates. The abundance and richness of each ciliate group varied geographically and were most strongly influenced by salinity variations; tintinnid ciliates attained high abundance and richness at high salinity sites in the harbour and coastal region and decreased within the estuary upstream. Aloricate ciliates were poorly represented at most sites but were a substantial proportion of upstream estuarine sites. Multivariate/univariate analyses demonstrated that spatial patterns of the ciliate communities were significantly correlated with environmental variables, especially salinity, chlorophyll-a, and nutrients, either alone or in combination with one another. These results indicate that the ciliates can be useful bioindicators in stressed environments while also allowing the detection of impacts on short time scales by rapidly responding to environmental variations.

Urbanization is particularly prevalent along the coast, causing a considerable change in the ecology of the habitats found there. Ports, docks and all the structures linked to this anthropization modify the coastal environment by providing new niches, but also new constraints. Thus, ports are ecosystems in their own right, although they are rarely studied as such. In Europe's largest marina (La Rochelle, France), among the multitude of organisms inhabiting it, four taxa seem particularly interesting to study: Mytilidae, Ostreïdae, Pectinidae and ascidiacea. Because these taxa, which belong to the bivalve and tunicate groups, are the stewards of the health of the port environment both as bioindicators and as engineering species. The establishment of a systematic and regular census allows us to study the evolution of their populations and to determine what influences their distribution. To have as less impact as possible on the fauna studied, the census was carried out by underwater photography. The study shows that the populations are partly conditioned by the hydrodynamics of the environment and by the anthropic activity which is carried out there. Indeed, this study, which was carried out in a particular context (before and after the COVID-19 health crisis), shows the importance of anthropic pressure, particularly on the bivalve communities. A large amount of data is needed to understand what precisely governs bivalve and tunicate populations. Therefore, an innovative method, using artificial intelligence to automate the analyses, was tested in this study. This promising method should facilitate the census by reducing the analysis time. [ABSTRACT FROM AUTHOR]

This study focused on 120 specimens of the shrimp Palaemon elegans collected in intertidal zones in eight selected areas. This study aimed to assess the suitability of P. elegans as a bioindicator of natural and anthropogenic marine pollution. Metal concentrations of aluminum (Al), cadmium (Cd), copper (Cu), iron (Fe), lead (Pb), and zinc (Zn) were measured in shrimp collected from various sites in the Canary Islands, including areas affected by volcanic activity, industrial activity, and control zones. The determination of metal concentrations was conducted using inductively coupled plasma optical emission spectrophotometry (ICP-OES). The results showed significant differences in metal concentrations across the studied sites, with the highest levels of Al, Cu, Fe, Pb, and Zn observed in areas impacted by the Tajogaite volcanic eruption and harbor activity. Sites near old landfills and sewage pipes also exhibited elevated levels of Cd, Cu, and Pb, indicating strong anthropogenic influence. Al was found in the highest concentration in Harbour, reaching 25.7 ± 6.2 mg/kg, while the lowest concentration was observed in Control Lp at 11.5 ± 0.69 mg/kg. Conversely, lower metal concentrations were detected in control zones and areas with high dinoflagellate presence, suggesting a potential role of bioremediation by marine phytoplankton. The ability of P. elegans to accumulate metals in its tissues, particularly in areas of high pollution, highlights its potential as a bioindicator species. This study underscores the importance of P. elegans in monitoring marine pollution and provides insights into the environmental impact of both natural and human-induced contamination on coastal ecosystems. [ABSTRACT FROM AUTHOR]

In an era when ecological and environmental needs and responsibilities apply pressure on the world's countries and sustainability takes centre stage, ecologic/environmental (E/E) laboratories stand as beacons of scientific inquiry, innovating, optimising, and applying various tests for a better knowledge of our natural resources and the quality status of ecosystems. The purpose of this review is to provide an overview of the use of flow cytometry (FC) as a tool for assessing environmental quality, mainly using living organisms and their biological changes as bioindicators. Cytometric approaches applied to both marine and terrestrial ecosystems ensure the detection of biochemical and functional status of the cells composing either an organ thereof or the organism itself. In addition to cytometric evaluations of the biotic matrix, a brief overview of the techniques for the environmental assessment of biotic and abiotic matrices using mass spectrometry is given. The technique involving the continuous monitoring of the chemical and physical parameters of water, sediment, and soil is basically incapable of detecting any additive and synergetic effects of toxicants on living organisms. Therefore, techniques employing bioindicators provide valuable information for environmental diagnosis, and several studies have demonstrated the strong relationship between specific environmental data and cell/organ behaviour. [ABSTRACT FROM AUTHOR]

Macroalgae are important bioorganisms used in fish feed and food industry. In addition, macroalgae are used in studies to determine radioactive pollution levels in the seas. In this study, it was aimed to determine the activity concentrations of 226Ra, 232Th, 137Cs and 40K in Cystoseira barbata which is a brown macroalgae samples obtained from the Eastern Black Sea coast of Turkey. Gamma spectrometry analyzes of the samples were carried out with high purity germanium (HPGe) detector system in the Nuclear Physics laboratory of Recep Tayyip Erdoğan University. The average 226Ra, 232Th, 137Cs and 40K activity concentrations in the samples were found to be 11.2, 7.61, 2.74 and 690.7 Bq.kg-1, respectively. The average annual effective dose values resulting from these radionuclides were obtained as 3.14, 1.75, 0.04 and 4.28 µSv.y-1, respectively. Total annual effective dose values calculated with the contribution of all radionuclides were found to be in the range of 1.37-18.83 µSv.y-1 . The calculated annual effective dose values are lower than 0.29 mSv.y-1, which is stated by UNSCEAR as the average annual effective dose received through ingestion of natural radionuclides, and the samples examined do not pose any radiological risk. [ABSTRACT FROM AUTHOR]

We evaluated the richness, diversity, and assemblage of Carabidae in the Val Grande National Park. Monitoring, by pitfall-trapping, was performed in 2021–2022 in two sites (S1 and S2), and considering six vegetation habitats ("Terraced ferns", "Terraced grassland", "Wood", "Chestnut grove", "Ecotone", and "Grassland"). A total of 2707 carabids consisting of 34 species were collected. The assemblage displayed the dominance of Calathus fuscipes graecus (27%), followed by Carabus glabratus latior (15%), and Carabus problematicus problematicus (15%). Besides the species already known for the Park, seven further species have been recorded. While in S1 the carabid assemblage was unexpectedly poor, a rich biodiversity with an excellent balance among the numerous brachypterous, macropterous, and pteropolymorphous species was recorded in S2. The species recorded in the habitat "Terraced ferns" and in "Ecotone" constituted the dominant groups and they accounted for 51% and 41%, in S1 and S2, respectively. The awareness of the species composition, richness, and ecology can be a useful tool for the Park to address the management of the surfaces in order to avoid disturbing the carabid fauna, especially for carabids of conservation concern, to mitigate their potential decline. [ABSTRACT FROM AUTHOR]

The change in the morphometric variable of ground beetles as well as in their volume (ellipsoidal biovolume) indicates the state of the biotope (unstable, stable), which is affected by anthropogenic activity such as forestry, agriculture and urbanisation. Between the years 2020 and 2022, we conducted research in floodplain forests, which were located in agriculturally used land and in the important European territory of Dunajské Luhy Protected Landscape Area. Using the pitfall traps method, we recorded 1319 individuals belonging to 29 species of ground beetles in six study areas representing two types of habitats (willow-poplar floodplain forest and regenerated poplar forest). We confirmed the largest average Ellipsoid Biovolume (EV) in the species Carabus coriaceus L. (2936 mm3), Carabus scheidleri Panzer (1427 mm3), Carabus violaceus L. (943 mm3), Carabus granulatus L. (366 mm3), Cychrus caraboides (L.) (336 mm3), Pterostichus niger (Schaller) (254 mm3), Harpalus rufipes (DeGeer) (123 mm3). The redundancy analysis confirmed the predominance of apterous and brachypterous species of ground beetles in forest stands in the Dunajské Luhy PLA (important European territory). These groups of Carabidae point to the ecological stability of biotopes, because they inhabit habitats where they have optimum food. On the contrary, we confirmed the predominance of macropterous species in forest biotopes in agrarian landscape conditions, which points to biotopes cyclically disturbed by anthropogenic activity. We recorded larger individuals in groups of apterous and brachypterous species in forest stands in the conditions of the Dunajské Luhy PLA. Larger macropterous individuals were recorded in forest stands in agrarian landscape conditions. In order to preserve forest habitats of European importance, it is necessary to know the ecological interactions between the ecosystem and ground beetles. [ABSTRACT FROM AUTHOR]

In this study, we utilized the larvae of Cheumatopsyche sp. (Insecta, Trichoptera, Hydropsychidae) as a key component to assess heavy metal contamination in the waters of the Bone River, Gorontalo, Indonesia. To measure the concentrations of heavy metals, specifically lead (Pb), cadmium (Cd), and mercury (Hg), an atomic absorption spectroscopy (AAS) was employed on both river sediments and the entire body of the Cheumatopsyche sp. larvae. Additionally, analysis was conducted using the SEM-EDX method to confirm the absorption of heavy metals in the larvae, particularly in the digestive tract. Sediment and larvae samples were collected from five sampling points along the main river, including reference sites in the upstream area. Our findings revealed that Hg and Cd levels were lower in the sediment compared to those in the larvae, while Pb levels were higher in the sediment. Examination of heavy metals in the digestive tract showed morphological abnormalities in larvae from the most contaminated sites. This research confirmed that Cheumatopsyche sp. larvae effectively absorb heavy metals, particularly Hg, validating their use as bioindicators in heavy metal bioassays. [ABSTRACT FROM AUTHOR]

Precise identification of diatom species is fundamental to correctly interpreting their roles in the marine ecosystems; the documentation of species records with illustrations is therefore essential to guarantee ecological works and the continuous use of compositional data in future works. We document the diatom flora in the Kuroshio Extension (KE) area of the northwestern Pacific. Samples were collected by sediment trap deployment from November 2017 to August 2018 and identified using light microscopy and scanning electron microscopy. Eighty-two taxa belonging to 17 families and 38 genera were documented with representative references, morphological dimensions, brief diagnosis, distribution, and short taxonomic comments. All of the taxa were divided into three distribution patterns (cold, warm, and eurythermal taxa) based on the previous distribution records; each group may be transported by the Oyashio and Kuroshio Currents, respectively. The mixed occurrence of cold- and warm-water species indicates that the KE area is a crossroads for them. A preliminary checklist was compiled from previous studies, incorporating our records, and 206 diatom taxa occurred in the northeastern path of the Kuroshio Current. The diatom flora in the KE area will be used to understand the hydrology of the Kuroshio Current in future work. [ABSTRACT FROM AUTHOR]

The southern hairy-nosed wombat (Lasiorhinus latifrons) is a large, nocturnal, herbivorous, burrowing marsupial, endemic to the semi-arid and arid regions of southern Australia. The active burrow of L. latifrons is used as the primary feature in population estimations. Therefore, accurate identification of an active burrow is vital, especially when other burrow-like structures exist. Entrance attributes such as width, height, the length and angle of the path leading to the entrance, and signs of wombat activity are indistinguishable between the different structures, making differentiation between them impossible without inspecting the structure beyond the entrance. Structures leading from entrances were identified in the field as possible burrows, blinds, and go-throughs. An unmanned aerial vehicle provided accurate images from immediately above 12 active wombat warren systems in the mid-north of South Australia, to support ground-truthing for mapping and verification of these structures. Active possible burrows (APB) were found to occur in proportionally lower numbers than the active non-burrow structures (ANBS) of blinds and go-throughs, varying in proportion from as high as 1:2 to as low as 1:11 (APB:ANBS). Defining an active burrow and other tunnels leading from an entrance increases accuracy in burrow identification used in population estimations, while recognising the existence of additional architectural features is vital to understanding the functional potential of L. latifrons as an ecosystem engineer. The burrow excavated by the southern hairy-nosed wombat is initially located by an entrance into the ground, but entrances also lead to other structures, with these not previously defined. With counts of active burrows used as the primary feature in population estimations, accuracy in their identification is vital. Here, we provide definition of these structures to increase the accuracy of population estimations but also to increase knowledge of the southern hairy-nosed wombat's digging activity, functional potential, warren system architecture, and possible adaptive ability. Image by R. Norris. [ABSTRACT FROM AUTHOR]

As lithium (Li) stands out as a crucial component of batteries, the inappropriate disposal of electronic gadgets might drive Li pollution in environmentally sensitive environments, such as dumps, where castor bean (Ricinus communis) plant communities are usually found. The exposure to high Li concentration is potentially harmful to the environment and humans. Therefore, it is opportune to evaluate the potential of bioindicator species to monitor Li contamination. In this scenario, the present study assessed the effects of Li exposure on the development of castor bean plants exposed to lithium chloride at five Li dosages (0, 5, 10, 20, and 30 mg dm−3). Significant symptoms of phytotoxicity were observed at all doses. Li dosage exhibited increasing impairment effects on plant biometrics, such as stem diameter and the number of leaves, as well as on the SPAD index, nutritional balance, and biomass production. Our findings suggest castor bean as a potential model species for biomonitoring Li-contaminated areas. [ABSTRACT FROM AUTHOR]

Concentrations of one metalloid (As) and eight metals (Cd, Cr, Cu, Hg, Mn, Ni, Pb, and Zn) were determined in tissues (muscle, liver, and kidney) of eight snake species (Bothrops neuwiedi, Crotalus durissus, Dipsas mikanii, Epicrates crassus, Helicops modestus, Micrurus carvalhoi, Oxyrhopus guibei, and Oxyrhopus trigeminus) from Lagoa Santa Karst. Except for Cu and Zn, all other analyzed elements were detected in concentrations within the ranges previously reported for snakes inhabiting polluted areas, emphasizing Hg (specific Hg mean concentrations varied from 0.87 to 9.76 μg g−1 d.w). The highest mean concentrations of all elements except Zn were found in muscle samples of the false corals O. guibei (means ranged from 2.01 [Pb] to 9.76 [Hg]). The highest Zn mean concentration (13.77 μg g−1 d.w) was detected in the kidney of the water snake H. modestus. No significant correlation was found between element concentrations and body size for all species. Significant interorgan differences were observed for As, Cr, Cu, Hg, Mn, Pb, and Zn concentrations in the three tissues in H. modestus. Significant interspecific differences were found in at least one organ for all elements. Significant pairwise differences were found between diet specialist species and between these species and broader diet species, while no significant difference was found between the broader diet species. The bioaccumulation of As and metals in snakes from Lagoa Santa Karst could be associated with natural rock dissolution and erosion processes but also with the wide-scale mining in the region and the increased agriculture and urbanization. [ABSTRACT FROM AUTHOR]

The viviparous eelpout Zoarces viviparus is a common fish across the North Atlantic and has successfully colonized habitats across environmental gradients. Due to its wide distribution and predictable phenotypic responses to pollution, Z. viviparus is used as an ideal marine bioindicator organism and has been routinely sampled over decades by several countries to monitor marine environmental health. Additionally, this species is a promising model to study adaptive processes related to environmental change, specifically global warming. Here, we report the chromosome-level genome assembly of Z. viviparus , which has a size of 663 Mb and consists of 607 scaffolds (N50 = 26 Mb). The 24 largest represent the 24 chromosomes of the haploid Z. viviparus genome, which harbors 98% of the complete Benchmarking Universal Single-Copy Orthologues defined for ray-finned fish, indicating that the assembly is highly contiguous and complete. Comparative analyses between the Z. viviparus assembly and the chromosome-level genomes of two other eelpout species revealed a high synteny, but also an accumulation of repetitive elements in the Z. viviparus genome. Our reference genome will be an important resource enabling future in-depth genomic analyses of the effects of environmental change on this important bioindicator species. [ABSTRACT FROM AUTHOR]

The analysis of the main biogenic elements in the thalli of the epiphytic cephalolichen Lobaria pulmonaria of different ontogenetic stages was conducted. Thallus for research was collected in the spruce forests of the Paanajärvi National Park, which disturbance age varied from 190 to 270 years from the tree trunks (living and dead) of Populus tremula, Salix caprea, Sorbus aucuparia, Betula spp. Chemical analysis of thalli samples showed that N content increased (r = 0.43, p = 0.0039) and K content decreased (r = −0.42, p = 0.0046) in the ontogenetic stages from virginal 1 to senile. We revealed different elements were accumulated in lichen thalli, depending on the elements' content in the substrate: C, K, Mn – in the young thalli, Ca, Cu, Zn – in old ones, Fe – in both groups. The results indicated the necessity to consider the ontogenetic stages of lichen thalli when analysing the element content, because the ignoring of this parameter can lead to results that did not reflect reality. [ABSTRACT FROM AUTHOR]

Microplastics generated from diverse categories of plastic wastes primarily accumulate in terrestrial ecosystems and subsequently find their way to aquatic ecosystems. As the use of plastic goods has been increasing globally during the last few decades, it is likely that the amount of microplastics too would increase significantly and get accumulated in the soil. An increased level of microplastics might have deleterious effects on soil properties and microbiota. Microplastics being small (< 5 mm), could be easily consumed by pedophagous soil fauna such as earthworms and get dispersed widely in soil and might even reach the groundwater table. It has been reported that microplastics such as polyvinyl chloride, polypropylene etc., can bind to toxic compounds, including pesticides and transfer these into the gut of earthworms, adversely impacting their growth, ecological functions, and reproduction. It is apprehended that earthworms and other soil fauna could accelerate the degradation of microplastics into nano forms which could enhance environmental risk not only for these animals but also for other beneficial soil biotas. [ABSTRACT FROM AUTHOR]

Authorities have long proved the utility of bioindicators in monitoring the state of environmental pollution. Some biological indicators can measure environmental pollutant levels, and many tree species have been tested for suitability for monitoring purposes. The differences in morphological characteristics in the trees have demonstrated the effects of human activities on different materials. Measuring bark and wood biomass from contaminated sites was identified and directly compared with those from a clean site or areas characterized by distinct contamination sources. However, preliminary results demonstrate the approach's potential in the realization of strategies for disease control and promoting health to reduce environmental and health inequalities in at-risk urban areas. Picea orientalis L. and Cedrus atlantica Endl., especially their bark, can be regarded as a more robust storage of Cu (37.95 mg/kg) and Mn (188.25 mg/kg) than Pinus pinaster, Cupressus arizonica, and Pseudotsuga menziesii, which and is therefore a better bioindicator for Cu and Mn pollution. Considering the total concentrations as a result of the study, the pollution is thought to be caused by environmental problems and traffic in the region. The deposition of Cu, Mn, Ni, and Zn elements was found P. menziesii (60, 443, 58, and 258 mg/kg) and P. orientalis (76, 1684, 41, and 378 mg/kg) and seems to reflect atmospheric quite clearly compared to P. pinaster, C. arizonica, and C. atlantica. Ni and Zn concentrations have significantly increased since 1983, and P. menziesii and P. orientalis can be potentially valuable bioindicators for emphasizing polluted fields. [ABSTRACT FROM AUTHOR]

Polycyclic aromatic hydrocarbons (PAHs) are widespread globally, primarily due to long-term anthropogenic pollution sources. Since PAHs tend to accumulate in soil sediments, liverwort plants, such as Lunularia cruciata, are susceptible to their adverse effects, making them good models for bioindicators. The aim of this study was to probe the impact of anthracene, a three-ring linear PAH, on the growth parameters of L. cruciata and the relationship established with the internalization of the pollutant throughout the phenology of the plant. Intrinsic plant responses, isolated from external factors, were assessed in vitro. L. cruciata absorbed anthracene from the culture medium, and its bioaccumulation was monitored throughout the entire process, from the gemma germination stage to the development of the adult plant, over a total period of 60 days. Consequently, plants exposed to concentrations higher than 50 μM anthracene, decreased the growth area of the thallus, the biomass and number of tips. Moreover, anthracene also impinged on plant symmetry. This concentration represented the maximum limit of bioaccumulation in the tissues. This study provides the first evidence that architectural variables in liverwort plants are suitable parameters for their use as bioindicators of PAHs. [ABSTRACT FROM AUTHOR]

Hildenbrandia rivularis belongs to the freshwater red algae and is cosmopolitan. In some European countries, this species is protected, e.g., in Poland, where it mainly inhabits highly oxygenated, fast-flowing ecosystems. This alga is often considered both a bioindicator of oligotrophic waters and a relatively rare species in Europe. However, the expansion and ecological tolerance of H. rivularis have increased over the last decades; thus, there is an urgent call to retest its environmental optima and significance for bioindicative potential. In this paper, H. rivularis from Welna River (Poland) growing on hard substrates was tested. In addition to genetic, microscopic, and physicochemical analyses, we also delivered for the first time the relationship between the transient temperature changes (15 – 45 °C, with 5 °C intervals) and oxygen uptake of H. rivularis (based on ex situ measurements of O2 consumption by thalli). Interestingly, for the eurythermal H. rivularis, at the lowest temperature (15 °C) treatment, the O2 uptake was undetectable, but the respiratory rate reached maximal velocity at the two highest temperatures (40 and 45 °C). Importantly, the respiration of this alga was relatively stable across temperature gradient 20 – 35 °C. This observation could explain why this species has been disappearing from colder waters of uplands and mountains and started to prefer warmer lowland water ecosystems. The further increase in global warming can significantly accelerate this tendency, thus causing a significant change in the H. rivularis distribution pattern known from the previous literature. Finally, our research sheds new light on the bioindicative potential of H. rivularis.

ABSTRACT The mangrove ecosystems are characterized by being one of the most productive, despite their poor soils, finding a great faunal richness. Meanwhile, pseudoscorpions are arachnids that inhabit all terrestrial ecosystems, and diverse in the tropics and subtropics. We evaluated the relationship of pseudoscorpions composition in mangrove forest fragments in the southern Gulf of Morrosquillo, using different metrics related to vegetation and land use. A total of 1063 individuals were collected, distributed in four families and eight species. Three indicator species of good conservation status were identified, Pachyolpium isolatum (Beier, 1931) a good indicator (A = 1.0; B = 0.93; p

Abstract The relationship between the protozoan communities and environmental variables was studied in the Nile River to evaluate their potential as water quality indicators. Protozoans were sampled monthly at six sampling sites in the Nile's Damietta Branch across a spatial gradient of environmental conditions during a 1-year cycle (February 2016–January 2017). The Protozoa community was comprised of 54 species belonging to six main heterotrophic Protozoa phyla. The abundance (average, 1089 ± 576.18 individuals L−1) and biomass (average, 86.60 ± 106.13 μg L−1) were comparable between sites. Ciliates comprised the majority of protozoan species richness (30 species), abundance (79.72%), and biomass (82.90%). Cluster analysis resulted in the distribution of protozoan species into three groups, with the most dominant species being the omnivorous ciliate Paradileptus elephantinus. Aluminium, fluoride, and turbidity negatively affected abundance and biomass, while dissolved oxygen and potassium positively impacted biomass. Of the dominant species recorded over the study area, the amoebozoa Centropyxis aculeata was associated with runoff variables, while the bacterivorous ciliates Colpidium colpoda, Glaucoma scintillans, and Vorticella convallaria were related to the abundance of heterotrophic bacteria, phytoplankton biomass, and total organic carbon. Total dissolved salts, PO4, NH3, NO2, dissolved oxygen, and total organic carbon were the strongest causative factors for protozoa distribution. The α-Mesosaprobic environment at site VI confirmed a high load of agricultural runoffs compared to other sites. This study demonstrates that protozoans can be a potential bioindicator of water quality status in this subtropical freshwater river system.

Abstract Background Marine benthic prokaryotic communities play crucial roles in material recycling within coastal environments, including coral reefs. Coastal sedimentary microbiomes are particularly important as potential reservoirs of symbiotic, beneficial, and pathogenic bacteria in coral reef environments, and therefore presumably play a core role in local ecosystem functioning. However, there is a lack of studies comparing different environments with multiple sites on the island scale, particularly studies focusing on prokaryotic communities, as previous investigations have focused mainly on a single site or on specific environmental conditions. In our study, we collected coastal sediments from seven sites around Okinawa Island, Japan, including three different benthic types; sandy bottoms, seagrass meadows, and hard substratum with living scleractinian corals. We then used metabarcoding to identify prokaryotic compositions and estimate enzymes encoded by genes to infer their functions. Results The results showed that the three substrata had significantly different prokaryotic compositions. Seagrass meadow sites exhibited significantly higher prokaryotic alpha-diversity compared to sandy bottom sites. ANCOM analysis revealed that multiple bacterial orders were differentially abundant within each substratum. At coral reef sites, putative disease- and thermal stress-related opportunistic bacteria such as Rhodobacterales, Verrucomicrobiales, and Cytophagales were comparatively abundant, while seagrass meadow sites abundantly harbored Desulfobacterales, Steroidobacterales and Chromatiales, which are common bacterial orders in seagrass meadows. According to our gene-coded enzyme analyses the numbers of differentially abundant enzymes were highest in coral reef sites. Notably, superoxide dismutase, an important enzyme for anti-oxidative stress in coral tissue, was abundant at coral sites. Our results provide a list of prokaryotes to look into in each substrate, and further emphasize the importance of considering the microbiome, especially when focusing on environmental conservation. Conclusion Our findings prove that prokaryotic metabarcoding is capable of capturing compositional differences and the diversity of microbial communities in three different environments. Furthermore, several taxa were suggested to be differentially more abundant in specific environments, and gene-coded enzymic compositions also showed possible differences in ecological functions. Further study, in combination with field observations and temporal sampling, is key to achieving a better understanding of the interactions between the local microbiome and the surrounding benthic community.

Rivers are water bodies in open ecosystems where activities in the environment have an impact on river water quality. Monitoring of water quality is necessary to preserve aquatic resources. One of the river basins on Lombok Island is the Jangkok River. This river has a high utility, so water quality monitoring is needed. Macroinvertebrates are one of the best biological indicators for water quality monitoring. The objective of this study is to determine the diversity of macroinvertebrates and the quality of Jangkok River waters by using macroinvertebrates as bioindicators so that the results of this study can be used as a reference basis for the future use of Jangkok River water in the allocation of community needs. The method used in this research is biomonitoring with macroinvertebrate bioindicators, and the technique used in sampling is purposive sampling. Sampling was conducted at three stations, namely the upstream, middle, and downstream parts of the Jangkok River. The data analysis used was the Family Biotic Index (FBI) supported by physical-chemical parameters. The results of this study showed that the macroinvertebrates identified were 721 individuals consisting of 5 classes, 17 orders, and 36 families. The water quality of the Jangkok River, based on the FBI value in the upstream and middle sections, is still included in the good category, while in the downstream section, it falls into the very bad category.

Precise identification of diatom species is fundamental to correctly interpreting their roles in the marine ecosystems; the documentation of species records with illustrations is therefore essential to guarantee ecological works and the continuous use of compositional data in future works. We document the diatom flora in the Kuroshio Extension (KE) area of the northwestern Pacific. Samples were collected by sediment trap deployment from November 2017 to August 2018 and identified using light microscopy and scanning electron microscopy. Eighty-two taxa belonging to 17 families and 38 genera were documented with representative references, morphological dimensions, brief diagnosis, distribution, and short taxonomic comments. All of the taxa were divided into three distribution patterns (cold, warm, and eurythermal taxa) based on the previous distribution records; each group may be transported by the Oyashio and Kuroshio Currents, respectively. The mixed occurrence of cold- and warm-water species indicates that the KE area is a crossroads for them. A preliminary checklist was compiled from previous studies, incorporating our records, and 206 diatom taxa occurred in the northeastern path of the Kuroshio Current. The diatom flora in the KE area will be used to understand the hydrology of the Kuroshio Current in future work.

The altitude of the habitat is one of the important regulators of species survival. Kaçkar Mountains National Park is located in the Eastern Black Sea region of Turkey. This is the first study on the benthic diatom flora of the high mountain lakes in Kaçkar Mountains National Park, which is situated between 2782 and 3075 m a.s.l. A total of 84 diatom species were identified from benthic communities of 15 habitats in summer (19 July, 28 August) and autumn (10 September) months of 2020. The genus Pinnularia (thirteen species) formed the basis of the taxonomic list, followed by Eunotia (five species), Navicula (five species), and Frustulia (four species) genera, respectively. The waters in all the studied lakes were fresh, low-saline, with low-alkaline or circumneutral pH and organically uncontaminated, as evidenced by prevailed bioindicator groups. Statistical methods and comparative floristic results confirm the role of the lake altitude for the diatom species distribution. The species richness of the studied lakes was higher in lakes with lower altitudes. The statistical approach also revealed the potential for an increase in the number of species in high mountain lakes if the study of the diatom flora of the Kachkar Mountains National Park is continued and the species composition of the lakes is replenished. Further studies will be needed to continue exploring this pattern. To protect studied high mountain lakes, their ecological conditions must be constantly monitored in the Kaçkar Mountains National Park.

Background & objectives: Sandflies are vector insects associated with terrestrial forest ecosystems; in the Ecuadorian Andes, they participate in the transmission of human cutaneous leishmaniasis. This geographical area represents an opportunity to evaluate the role of sandflies as bioindicators of the degree of intervention of tropical humid forest ecosystems (THF) associated with changes in the ecology of the local landscape. Methods: CDC-light traps were used for collecting adult sandflies in February 2020 in a humid tropical forest within the Chocó Biosphere Reserve. All species were identified using morphological keys. Analysis data about abundance, richness, species accumulation, diversity index, species composition communities, species sex proportion, spatial sandflies environmental, Renyi’s Diversity Profile were performed to compare six spatial habitats in Mashpi locality, Ecuador. Results: Sandflies were collected (n-1435); the main species are represented by Trichophoromyia reburra, Nyssomyia trapidoi, Psathyromyia aclydifera, Psychodopygus panamensis and Lutzomyia hartmanni. Only Th. reburra is associated with not intervened forest, while the other three species are associated with intervened forest within Mashpi in the Choco Biosphere Reserve. The secondary forest has major sandflies’ richness, while the primary forest exhibits major abundance. Interpretation & conclusion: Th. reburra is a sandfly restricted to the Andean Forest and is a bioindicator of the high environmental health quality of the forest, while Ny. trapidoi and Pa. aclydifera are bioindicators of environmental disturbances in the forest. Additionally, Ps. panamensis, Lu. hartmanni and Ny. trapidoi are bioindicators of human impact and the risk of leishmaniasis.

The invasion of Ukraine and military operations around Ukrainian nuclear power plants and other nuclear facilities have prompted us to search for radiocaesium in mosses from the Kopački Rit Nature Park in Croatia, since mosses are known bioindicators of airborne radioactive pollution, and Kopački Rit is a known low radiocaesium background area. Sampling was finished in August 2023, and our analysis found no elevated radiocaesium levels. Kopački Rit therefore remains a suitable place for future detection of anthropogenic radioactive pollutants.

The purpose of this research was to establish the baseline concentrations of thirteen trace elements (Cd, Co, Cr, Cu, Ni, Pb, Fe, Mg, Na, K, Sr, Ca, and Zn) in feathers of the common blackbird Turdus merula (n=9) at the Natura 2000 site “Marine Dunes from Agigea” (ROSCI0073). Both remiges and rectrices were pooled, and the quantification of trace elements was accomplished using two spectrometry analysis methods: high-resolution continuum source atomic absorption spectrometer with a graphite furnace (HR-CS GF-AAS) and flame atomic absorption spectrometer (FL-AAS). The concentration of Ca was the highest of the thirteen trace elements, registering at 209.9146±192.4098 µg·g-1 w.w., while Cd had the lowest concentration levels in feathers, 0.0243±0.0158 µg·g-1 w.w., respectively. However, the results obtained were significantly lower than those in the relevant literature. These findings suggest that the bioavailability of the analysed trace elements is minimal in our study area. Thus, it is imperative to conduct further research on the impact of these trace elements' accumulation and effects on avifauna in the Natura 2000 site “Marine Dunes from Agigea”.

Biological indicators are essential for detecting contaminants globally because they can inform us about the long-term effects of many pollutants in the environment. About 80 snail individuals Physella acuta, an adult freshwater snail (Gastropod: Physidae) were collected from the Tigris River / Lower Zab near Taqtaq bridge, Erbil Province, Iraq on November 2022. In the laboratory, the animals were placed in tanks with river water for acclimatization. The 24-, 48, 72 and 96-h toxicity of two heavy metals cupper and Cadmium (CuSO4·5H2O and CdCl2.2 H2O) have been investigated using various nominal concentrations, including 0.0, 0.3, 0.5, 0.7 and 0.9 mg L−1 for Cu and 0.5, 1.0,3.0 ,5.0 and 7.0 mg L−1 for Cd. The behavioral changes and the snail’s mortality were noticed daily and the median lethal concentrations values (LC50) for 24-, 48-, 72- and 96-h were calculated. The LC50 values for the 24, 48,72 and 96- hour exposures to Cu and Cd were 0.911, 0.699, 0.462, 0.209 mg L−1 and 2.359, 1.020, 0.094 and 0.040 mg L−1, respectively. Results indicated that Cu showed noticeably greater toxicity than Cd. Also, treated groups showing significant variation in water pH value throughout the studied time. The study concluded that selected snail species can be used as a bioindicator for evaluating the hazards related to environmental pollutants.

Background: Marine benthic prokaryotic communities play crucial roles in material recycling within coastal environments, including coral reefs. Coastal sedimentary microbiomes are particularly important as potential reservoirs of symbiotic, beneficial, and pathogenic bacteria in coral reef environments, and therefore presumably play a core role in local ecosystem functioning. However, there is a lack of studies comparing different environments with multiple sites on the island scale, particularly studies focusing on prokaryotic communities, as previous investigations have focused mainly on a single site or on specific environmental conditions. In our study, we collected coastal sediments from seven sites around Okinawa Island, Japan, including three different benthic types; sandy bottoms, seagrass meadows, and hard substratum with living scleractinian corals. We then used metabarcoding to identify prokaryotic compositions and estimate enzymes encoded by genes to infer their functions. Results: The results showed that the three substrata had significantly different prokaryotic compositions. Seagrass meadow sites exhibited significantly higher prokaryotic alpha-diversity compared to sandy bottom sites. ANCOM analysis revealed that multiple bacterial orders were differentially abundant within each substratum. At coral reef sites, putative disease- and thermal stress-related opportunistic bacteria such as Rhodobacterales, Verrucomicrobiales, and Cytophagales were comparatively abundant, while seagrass meadow sites abundantly harbored Desulfobacterales, Steroidobacterales and Chromatiales, which are common bacterial orders in seagrass meadows. According to our gene-coded enzyme analyses the numbers of differentially abundant enzymes were highest in coral reef sites. Notably, superoxide dismutase, an important enzyme for anti-oxidative stress in coral tissue, was abundant at coral sites. Our results provide a list of prokaryotes to look into in each substrate, and further emphasize the importance of considering the microbiome, especially when focusing on environmental conservation. Conclusion: Our findings prove that prokaryotic metabarcoding is capable of capturing compositional differences and the diversity of microbial communities in three different environments. Furthermore, several taxa were suggested to be differentially more abundant in specific environments, and gene-coded enzymic compositions also showed possible differences in ecological functions. Further study, in combination with field observations and temporal sampling, is key to achieving a better understanding of the interactions between the local microbiome and the surrounding benthic community. [ABSTRACT FROM AUTHOR]