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Abstract This study aimed to assess the reliability and validity of a novel clinical tool for distributing rehabilitation patients (DRP) for measuring a population of rehabilitation patients based on first-hand data from the field survey in China. A multi-stage sampling scheme was used to select 2512 rehabilitation outpatients from 21 medical institutions in seven cities in China. The evaluation indicators of the DRP tool consisted of five clinical indexes on multiple dysfunctions, self-care ability, vital signs, disease status, and disease course. The evaluation of rehabilitation ways of the DRP tool mainly included outpatient rehabilitation treatment, admission to primary healthcare, admission to secondary hospitals, and admission to tertiary hospitals. The mean age of participants was 54.22 years (SD:17.91), and nearly half (48.68%) were male. The majority (70.15%) were diagnosed with orthopaedic disorders. The Cronbach’s alpha (0.66), the Kendall test (Kendall coefficient = 0.86; P

The purging plug is essential for enhancing production efficiency in molten steel refining, yet it faces challenges related to structural integrity due to its lifespan often not aligning with the ladle's repair cycle. This study introduces a novel corundum-calcium hexaluminate purging plug with gradual holes designed to alleviate internal stress concentration. Utilizing a multi-objective optimization model and fluid-solid coupling heat transfer method, the impact of structural parameters on thermal and mechanical properties was systematically investigated. The numerical simulation results indicate that increasing the number of gradient layers positively impacts temperature distribution. Notably, the D-210 (1.0 mm diameter) aperture reduces the stress gradient Δσmax by 648.06 MPa compared to D-212 (1.2 mm diameter) at the Y = 0.313 m section. Additionally, variation in inclination angle impacts tensile stress σt and shear stress τ, an inclination angle of 6° (α6) reduces maximum tensile stress by 211.41 MPa compared to an angle of 0° (α0).

Open-cell ceramic foams are widely used as filters for the purification of molten metals due to their high permeability and high efficiency for capturing non-metallic inclusions. With the consideration of manufacture and filtration behaviour, most filters are produced by replica methods. The intrinsic multiscale porous structure requires the ceramic foams to have sufficient strength. As a consequence, different processing approaches, material compositions and characterizations are investigated. Meanwhile, to further enhance the filtration performance, the functionalization of ceramic foam filters is often conducted with surface coating. This review summarizes the processing and characteristics of ceramic foam filters (CFFs), the nature and formation of non-metallic inclusions (NMIs), the filtration mechanism and applications of CFFs. The characterization of mechanical and filtration performance, as well as the corresponding strengthening and functionalization methods are also presented.

Abstract Spatially resolved transcriptomics integrates high-throughput transcriptome measurements with preserved spatial cellular organization information. However, many technologies cannot reach single-cell resolution. We present STdGCN, a graph model leveraging single-cell RNA sequencing (scRNA-seq) as reference for cell-type deconvolution in spatial transcriptomic (ST) data. STdGCN incorporates expression profiles from scRNA-seq and spatial localization from ST data for deconvolution. Extensive benchmarking on multiple datasets demonstrates that STdGCN outperforms 17 state-of-the-art models. In a human breast cancer Visium dataset, STdGCN delineates stroma, lymphocytes, and cancer cells, aiding tumor microenvironment analysis. In human heart ST data, STdGCN identifies changes in endothelial-cardiomyocyte communications during tissue development.

Objective: This study examines the relationship between health communication on integrated healthcare and primary healthcare visits among rehabilitation outpatients in China. Methods: A multi-stage sampling scheme was used to select the rehabilitation outpatients as study participants. A total of 3415 participants from 21 medical institutions in seven cities in China were included in the final analysis. The measurement included primary healthcare visits, health communication on integrated healthcare, and basic characteristics (age, sex, educational level, marital status, household income, and diagnoses). The association between health communication on integrated healthcare and primary healthcare visits was modeled using logistic regression controlling the general characteristics and disease status. Results: Among 3415 rehabilitation outpatients, the mean age of participants was 45.3 years (SD:24.9), and more than half (54.0 %) were male. The majority (56.3 %) were diagnosed with orthopaedic disorders. Received information of integrated healthcare from organizational communication (OR = 2.00; 95 % CI = 1.56, 2.56) and interpersonal communication (OR = 6.03; 95 % CI = 2.49, 14.62), patients who had a higher level of knowledge on integrated healthcare (OR = 1.02; 95% CI = 1.00, 1.03), the interaction terms of ‘organizational communication ∗ knowledge’(OR = 0.98; 95 % CI = 0.97, 1.00), and ‘interpersonal communication ∗ knowledge’(OR = 0.92; 95 % CI = 0.87, 0.97) were associated with visiting primary healthcare initially when had an illness the last two weeks. Conclusion: This study indicated that rehabilitation outpatients display a low level of primary healthcare visits, calling for interpersonal-based health communication interventions to be implemented to improve their integrated healthcare knowledge and promote better primary healthcare visits practices in China.

PurposeTo test spatial ability in athletes with different axial rotation experience and analyze their behavioral data to explain the cognitive mechanisms of spatial ability in athletes.MethodsExperiment 1: A total of 147 athletes were selected for the paper-and-pencil mental rotation test (MRT). The athletes were separated according to three sport types: open high-spatial (OH) sport, closed high-spatial (CH) sport, closed low-spatial (CL) sport. Spatial ability testing with a two-factor mixed experimental design of 3 (sport type) × 2 (stimulus type). Experiment 2: In this study, 47 players were selected for computerized mental rotation test, with a three-factor mixed experimental design of 3 (sport type) × 2 (angle: 45°, 90°) × 3 (rotational axis: left–right axis, up–down axis, and front–back axis). Repeated-measures ANOVA was performed to evaluate the data.Results(1) The CH group and OH group outperformed the CL group in the non-embodied task (all ps

Pyrus pyrifolia Nakai ‘Whangkeumbae’ is a sand pear fruit with excellent nutritional quality and taste. However, the industrial development of pear fruit is significantly limited by its short shelf life. Salicylic acid (SA), a well-known phytohormone, can delay fruit senescence and improve shelf life. However, the mechanism by which SA regulates CONSTANS-LIKE genes (COLs) during fruit senescence and the role of COL genes in mediating fruit senescence in sand pear are poorly understood. In this study, 22 COL genes were identified in sand pear, including four COLs (PpCOL8, PpCOL9a, PpCOL9b, and PpCOL14) identified via transcriptome analysis and 18 COLs through genome-wide analysis. These COL genes were divided into three subgroups according to the structural domains of the COL protein. PpCOL8, with two B-box motifs and one CCT domain, belonged to the first subgroup. In contrast, the other three PpCOLs, PpCOL9a, PpCOL9b, and PpCOL14, with similar conserved protein domains and gene structures, were assigned to the third subgroup. The four COLs showed different expression patterns in pear tissues and were preferentially expressed at the early stage of fruit development. Moreover, the expression of PpCOL8 was inhibited by exogenous SA treatment, while SA up-regulated the expression of PpCOL9a and PpCOL9b. Interestingly, PpCOL8 interacts with PpMADS, a MADS-box protein preferentially expressed in fruit, and SA up-regulated its expression. While the production of ethylene and the content of malondialdehyde (MDA) were increased in PpCOL8-overexpression sand pear fruit, the antioxidant enzyme (POD and SOD) activity and the expression of PpPOD1 and PpSOD1 in the sand pear fruits were down-regulated, which showed that PpCOL8 promoted sand pear fruit senescence. In contrast, the corresponding changes were the opposite in PpMADS-overexpression sand pear fruits, suggesting that PpMADS delayed sand pear fruit senescence. The co-transformation of PpCOL8 and PpMADS also delayed sand pear fruit senescence. The results of this study revealed that PpCOL8 can play a key role in pear fruit senescence by interacting with PpMADS through the SA signaling pathway.

Abstract Progress in sequencing technologies and clinical experiments has revolutionized immunotherapy on solid and hematologic malignancies. However, the benefits of immunotherapy are limited to specific patient subsets, posing challenges for broader application. To improve its effectiveness, identifying biomarkers that can predict patient response is crucial. Machine learning (ML) play a pivotal role in harnessing multi-omic cancer datasets and unlocking new insights into immunotherapy. This review provides an overview of cutting-edge ML models applied in omics data for immunotherapy analysis, including immunotherapy response prediction and immunotherapy-relevant tumor microenvironment identification. We elucidate how ML leverages diverse data types to identify significant biomarkers, enhance our understanding of immunotherapy mechanisms, and optimize decision-making process. Additionally, we discuss current limitations and challenges of ML in this rapidly evolving field. Finally, we outline future directions aimed at overcoming these barriers and improving the efficiency of ML in immunotherapy research.

Abstract Background This work investigated the differences in the biomechanical properties of open reduction and internal fixation (ORIF) and percutaneous minimally invasive fixation (PMIF) for the fixation of calcaneal fractures (Sanders type II and III calcaneal fractures as examples) through finite element analysis. Methods Based on CT images of the human foot and ankle, according to the principle of three-point fixation, namely the sustentaculum tali, the anterior process and the calcaneal tuberosity were fixed. Three-dimensional finite element models of Sanders type II and III calcaneal fractures fixed by ORIF and PMIF were established. The proximal surfaces of the tibia, fibula and soft tissue were constrained, and ground reaction force and Achilles tendon force loads were added to simulate balanced standing. Results The maximum stress was 80.54, 211.59 and 113.88 MPa for the calcaneus, screws and plates in the ORIF group and 70.02 and 209.46 MPa for the calcaneus and screws in the PMIF group, respectively; the maximum displacement was 0.26, 0.21 and 0.12 mm for the calcaneus, screws and plates in the ORIF group and 0.20 and 0.14 mm for the calcaneus and screws in the PMIF group, respectively. The values obtained from the simulation were within the permissible stress and elastic deformation range of the materials used in the model, and there was no significant stress concentration. The maximum stress and displacement of the calcaneus and implants were slightly lower in the PMIF group than in the ORIF group when fixing Sanders type II and III calcaneal fractures. Conclusions This study may provide a reference for optimising the design of implants, the development of individualised preoperative plans and the choice of clinical surgical approach.

The external pressure is one of the essential parameters for regulating the structure and energy conversion properties of antiferroelectric AgNbO3. For pure AgNbO3, however, there has been still a blank of its real lattice structure under the stress field. Here, high-pressure lattice structures and phase transitions of AgNbO3 have been explored by spectroscopic experiments and theoretical models. A successive phase transition process from Pbcm to C2221 to P21 has been observed at the pressure range of 0–30 GPa, associated with displacive-type characterized by soft-mode kinetics. Note that the paraelectric phase cannot be achieved under high-pressure at room temperature. Significantly, the competition of long-range Coulomb force, short-range interatomic interaction, and covalent interaction in AgNbO3 lattice were demonstrated under the stress field. The present work can provide fundamental guidelines to reveal the high-pressure phase transitions of AgNbO3, which will open up possibilities for the designing device with functional properties at extremes.

Abstract Objective To retrospectively analyze clinical features in adolescent Menière's disease (MD). Methods The medical records of adolescents with MD (11–17 years old) from May 2014 to March 2023 in Shandong Provincial ENT Hospital were retrospectively analyzed, including clinical features, a battery of auditory and vestibular function tests, sensory organization test, and imaging assessments. Patients with recurrent vertigo of childhood (RVC) were as controls. Results Compared with RVC, adolescent MD showed higher pure tone average threshold (p

Compared with 454 sequencing technology, short-read sequencing (e.g., Illumina) technology generates sequences of high accuracy, but limited length (500 bp) is challenging. The ammonia monooxygenase subunit A (amoA) gene of ammonia-oxidizing archaea (AOA), which plays a crucial part in the nitrification process, is such a gene. By providing a full overview of the community of a functional microbial guild, 16S ribosomal ribonucleic acid (rRNA) gene sequencing could overcome this problem. However, it remains unclear how 16S rRNA primer selection influences the quantification of relative abundance and the identification of community composition of nitrifiers, especially AOA. In the present study, a comparison was made between the performance of primer pairs 338F-806R, 515F-806R, and 515F-907R to a shotgun metagenome approach. The structure of nitrifier communities subjected to different long-term organic matter amendment and water management protocols was assessed. Overall, we observed higher Chao1 richness diversity of soil total bacteria by using 515F-806R compared to 338F-806R and 515F-907R, while higher Pielou’s evenness diversity was observed by using 515F-806R and 515F-907R compared to 338F-806R. The studied primer pairs revealed different performances on the relative abundance of Thaumarchaeota, AOB, and NOB. The Thaumarchaeota 16S rRNA sequence was rarely detected using 338F-806R, while the relative abundances of Thaumarchaeota detected using 515F-806R were higher than those detected by using 515F-907R. AOB showed higher proportions in the 338F-806R and 515F-907R data, than in 515F-806R data. Different primers pairs showed significant change in relative proportion of NOB. Nonetheless, we found consistent patterns of the phylotype distribution of nitrifiers in different treatments. Nitrosopumilales (NP) and Nitrososphaerales (NS) clades were the dominant members of the AOA community in soils subject to controlled irrigation, whereas Ca. Nitrosotaleales (NT) and NS clades dominated the AOA community in soils subject to flooding irrigation. Nitrospira lineage II was the dominant NOB phylotype in all samples. Overall, ideal 16S rRNA primer pairs were identified for the analysis of nitrifier communities. Moreover, NP and NT clades of AOA might have distinct environmental adaptation strategies under different irrigation treatments.

Abstract Background TMPRSS2-ERG (T2E) fusion is highly related to aggressive clinical features in prostate cancer (PC), which guides individual therapy. However, current fusion prediction tools lacked enough accuracy and biomarkers were unable to be applied to individuals across different platforms due to their quantitative nature. This study aims to identify a transcriptome signature to detect the T2E fusion status of PC at the individual level. Methods Based on 272 high-throughput mRNA expression profiles from the Sboner dataset, we developed a rank-based algorithm to identify a qualitative signature to detect T2E fusion in PC. The signature was validated in 1223 samples from three external datasets (Setlur, Clarissa, and TCGA). Results A signature, composed of five mRNAs coupled to ERG (five ERG-mRNA pairs, 5-ERG-mRPs), was developed to distinguish T2E fusion status in PC. 5-ERG-mRPs reached 84.56% accuracy in Sboner dataset, which was verified in Setlur dataset (n = 455, accuracy = 82.20%) and Clarissa dataset (n = 118, accuracy = 81.36%). Besides, for 495 samples from TCGA, two subtypes classified by 5-ERG-mRPs showed a higher level of significance in various T2E fusion features than subtypes obtained through current fusion prediction tools, such as STAR-Fusion. Conclusions Overall, 5-ERG-mRPs can robustly detect T2E fusion in PC at the individual level, which can be used on any gene measurement platform without specific normalization procedures. Hence, 5-ERG-mRPs may serve as an auxiliary tool for PC patient management.

Abstract Objective The associations between plasma vitamin B12 level and anemia under different dietary patterns in elderly Chinese people are poorly understood. We aimed to examine the associations between plasma vitamin B12 levels and anemia under different dietary patterns in adults aged 65 years and older in nine longevity areas in China. Methods A total of 2405 older adults completed a food frequency questionnaire at the same time as a face-to-face interview. The dietary diversity score (DDS) was assessed based on the food frequency questionnaire, with the low DDS group referring to participants with a DDS score ≤ 4 points. Vitamin B12 levels were divided into two groups of high (>295 pg/mL) and low (≤ 295 pg/mL) with the median used as the cut-off point. Sub-analyses were also performed on older adults divided into tertiles of vitamin B12 levels: low ( 375 pg/mL) to study the association of these levels with anemia. Results Six hundred ninety-five (28.89%) of these people were diagnosed with anemia and had a mean age of 89.3 years. Higher vitamin B12 levels were associated with a decreased risk of anemia (multi-adjusted OR, 0.59, [95% CI, 0.45 ~ 0.77] P

This study describes the purification and preparation of tricin (5, 7, 4-trihydroxy-3, 5-dimethoxyflavone) from Carex Meyeriana Kunth via adsorption and desorption using macroporous resins and high-performance liquid chromatography. Six resins were tested to evaluate the static adsorption and desorption capacities. The HPD-300 resin was selected as the adsorption material to enrich tricin because of its suitable adsorption and desorption capacities. Adsorption thermodynamics and kinetics were studied on HPD-300 resin, and the results agreed with the Langmuir model and quasi-second-order kinetics model, respectively. The parameters of the dynamic adsorption and desorption tests were then optimized. The purity of tricin increased from 2.6 mg/g to 45.1 mg/g with a recovery yield of 76.4% after purification using HPD-300 resin. Then, Prep-HPLC was used to further purify tricin. The purity of tricin reached 99.4%, with a recovery yield of 78.0% thereafter. Tricin exerts an inhibitory effect on the proliferation of various tumor cells, including gastric cancer SGC-7901 cells. It significantly suppresses cell colony formation while also altering cell cycle progression metabolism by decreasing the proportion of cells in the G0/G1 phase and increasing the proportion in the S and G2/M phases. Additionally, tricin affects the efficiency of SGC-7901 cell lactate production, ATP content, and glucose uptake. These findings suggest that tricin may impede tumor cell proliferation through its impact on cell cycle progression and energy metabolism.

As one of the most important fertilizers in agriculture, the fate of urea-derived nitrogen (urea-N) in agricultural ecosystems has been well documented. However, little is known about the function of urea-derived carbon (urea-C) in soil ecosystems, especially which soil microorganisms benefit most from the supply of urea-C and whether the utilization of urea-C by the rhizosphere and bulk soil microorganisms is affected by irrigation regimes. To address this, a soil pot experiment was conducted using 13C-labeled urea to investigate changes in the composition of the rhizosphere and bulk soil microbial communities and differences in the incorporation of urea-derived C into the rhizosphere and bulk soil phospholipid fatty acids (PLFA) pool under flooded irrigation (FI) and water-saving irrigation (CI). Our results suggest that the size and structure of the rhizosphere and bulk soil microbial communities were strongly influenced by the irrigation regime. The CI treatment significantly increased the total amount of PLFA in both the rhizosphere and bulk soil compared to the FI treatment, but it only significantly affected the abundance of Gram-positive bacteria (G+) in the bulk soil. In contrast, shifts in the microbial community structure induced by irrigation regimes were more pronounced in the rhizosphere soil than in the bulk soil. Compared to the FI treatment, the CI treatment significantly increased the relative abundances of the G+ and Actinobacteria in the rhizosphere soil (p < 0.05). According to the PLFA-SIP, most of the labeled urea-derived C was incorporated into 16:1ω7c, 16:0 and 18:1ω7c under both treatments. Despite these general trends, the pattern of 13C incorporation into the PLFA pool differed between the treatments. The factor loadings of individual PLFAs suggested that 18:1ω7c, 16:1ω7c and 16:1ω5c were relatively enriched in urea-C in the bulk soil, while 17:1ω8c, i16:0 and 16:0 were relatively enriched in urea-C in the rhizosphere soil under different irrigation regimes. The loadings also confirmed that 10-me16:0, cy17:0 and cy19:0 were relatively enriched in urea-C under the CI treatment, whereas 14:0, a15:0 and 15:0 were relatively enriched in urea-C under the FI treatment. These results are helpful not only in revealing the interception mechanism of urea-C in soil but also in understanding the functions of key microbes in element cycles.

The objective of this study was to enhance the membrane permeability and anticancer effectiveness of (20S)-protopanaxadiol (PPD) by introducing triphenylphosphonium into the OH group at the C-3 site. This study shows that the anti-proliferation activity of CTPPPPD, with an IC50 value of 1.65 ± 0.10 μmol/L, was 33-times better than that of PPD (with an IC50 value of 54.56 ± 4.56 μmol/L) and superior to that of cisplatin (with an IC50 value of 1.82 ± 0.25 μmol/L) against A549 cells. Biological examinations suggested that CTPPPPD treatment reduced the growth rate of A549 cells, increased the permeability of cell membranes, and changed the structure of chromosomal DNA in a concentration-dependent manner. Annexin V/PI assay and flow cytometry were employed to detect the effect of CTPPPPD on the apoptosis of A549 cells. The results showed that CTPPPPD could induce the apoptosis of A549 cells, and the apoptosis rate of A549 cells treated with 0, 1.0, 2.0, and 4.0 μM of CTPPPPD for 24 h was 0%, 4.9%, 12.7%, and 31.0%, respectively. The integration of transcriptomics and metabolomics provided a systematic and detailed perspective on the induced antitumor mechanisms. A combined analysis of DEGs and DAMs suggested that they were primarily involved in the central carbon metabolism pathway in cancer, as well as the metabolism of aminoacyl-tRNA biosynthesis, alanine, aspartate, and glutamate. Central carbon metabolism in cancer-related genes, i.e., SLC16A3, FGFR3, LDHA, PGAM1, and SLC2A1, significantly reduced after treatment with CTPPPPD. In particular, the dominant mechanism responsible for total antitumor activity may be attributed to perturbations in the PI3K-AKT, MAPK, and P53 pathways. The findings derived from transcriptomics and metabolomics were empirically confirmed through q-PCR and molecular docking. Further analyses revealed that CTPPPPD could be a promising lead for the development of protopanaxadiol for non-small-cell lung cancer (NSCLC) drugs.

An artificial semisynthetic material can be derived from artemisinin (ART) called dihydroartemisinin (DHA). Although DHA has enhanced antigiardial potential, its clinical application is limited because of its poor selectivity and low solubility. The drug’s absorption has a direct impact on the cell, and mechanism research is limited to its destruction of the cytoskeleton. In this study, we used the zeolitic imidazolate framework-8 and loaded it with DHA (DHA@Zif-8) to improve its antigiardial potential. DHA@Zif-8 can enhance cellular uptake, increase antigiardial proliferation and encystation, and expand the endoplasmic reticulum compared with the DHA-treated group. We used RNA sequencing (RNA-seq) to investigate the antigiardial mechanism. We found that 126 genes were downregulated and 123 genes were upregulated. According to the KEGG and GO pathway analysis, the metabolic functions in G. lamblia are affected by DHA@Zif-8 NPs. We used real-time quantitative reverse transcription polymerase chain reaction to verify our results using the RNA-seq data. DHA@Zif-8 NPs significantly enhanced the eradication of the parasite from the stool in vivo. In addition, the intestinal mucosal injury caused by G. lamblia trophozoites markedly improved in the intestine. This research provided the potential of utilizing DHA@Zif-8 to develop an antiprotozoan drug for clinical applications.

The development of compressed air energy storage (CAES) technology can ensure the safe and stable operation of the power system, promote the consumption of renewable energy and reduce carbon emissions. In order to improve the comprehensive performance of the CAES system and meet the diversified demand of energy, a cooling, heating and power cogeneration system based on compressed air energy storage with high temperature thermal energy storage and ammonia absorption refrigeration are developed in this study. The compression heat of the energy storage process and the exhaust waste heat of the energy release process are fully utilized in this system. Thermodynamic analysis, techno-economic evaluation and parametric analysis are conducted. The thermodynamic analysis results show that the proposed system achieve an ENE of 81.51 %, an EXE of 53.51% and an ESD of 7.08 kWh/m3 under the design condition. The economic analysis results indicate that the NPV, IRR and LCOE for a system life of 25 years are 489497 $, 32.1 % and 0.0953 $/kWh, with a DPP of 3.91 years. Sensitivity analysis results conclude that the outlet temperature of HTTES, and the maximum and minimum operating pressures are the key parameters affecting the system performance.

Summary: Craniofacial microsomia (CFM) is a congenital defect that usually results from aberrant development of embryonic pharyngeal arches. However, the molecular basis of CFM pathogenesis is largely unknown. Here, we employ the zebrafish model to investigate mechanisms of CFM pathogenesis. In early embryos, tet2 and tet3 are essential for pharyngeal cartilage development. Single-cell RNA sequencing reveals that loss of Tet2/3 impairs chondrocyte differentiation due to insufficient BMP signaling. Moreover, biochemical and genetic evidence reveals that the sequence-specific 5mC/5hmC-binding protein, Sall4, binds the promoter of bmp4 to activate bmp4 expression and control pharyngeal cartilage development. Mechanistically, Sall4 directs co-phase separation of Tet2/3 with Sall4 to form condensates that mediate 5mC oxidation on the bmp4 promoter, thereby promoting bmp4 expression and enabling sufficient BMP signaling. These findings suggest the TET-BMP-Sall4 regulatory axis is critical for pharyngeal cartilage development. Collectively, our study provides insights into understanding craniofacial development and CFM pathogenesis.

Polycyclic aromatic hydrocarbons (PAHs) have been reported to be associated with adverse pregnancy outcomes. However, there is limited knowledge regarding the effects of single or mixed PAHs exposure on unexplained recurrent spontaneous abortion (URSA). This study aimed to investigate the association between monohydroxylated polycyclic aromatic hydrocarbons (OH-PAHs) and URSA in a case-control study. The results showed that 1-NAP, 2-NAP, 9-FLU, and 1-PYR were detected in 100% of the subjects among measured all sixteen OH-PAHs. Compared with those in the lowest quartiles, participants in the highest quartiles of 3-BAA were associated with a higher risk of URSA (OR (95%CI) = 3.56(1.28–9.85)). With each one-unit increase of ln-transformed 3-BAA, the odds of URSA increased by 41% (OR (95%CI) = 1.41(1.05–1.89)). Other OH-PAHs showed negative or non-significant associations with URSA. Weighted quantile sum (WQS) regression, Bayesian kernel machine regression (BKMR), and quantile-based g-computation (qgcomp) analyses consistently identified 3-BAA as the major contributor to the mixture effect of OH-PAHs on URSA. Our findings suggest that exposure to 3-BAA may be a potential risk factor for URSA. However, further prospective studies are needed to validate our findings in the future.

To widen the understanding of tensile failure of reticulated ceramic foams and expand the available mechanical method, a cylindrical splitting test is developed in the present study based on alumina open-cell foams of three different pore densities. The biaxial method is validated by characterization of mechanical parameters, and the in-situ fracture process is validated by a digital image correlation, followed by a formula correction for effective tensile strength with consideration of discrete crack paths. For experimental setup curved loading platens, compliant pad and intermediate quasi-static loading rate are proposed for guaranteeing tensile failure under a radial compressive load. Tensile strength, fracture energy, and brittleness increase with the foam pore density, and the fracture behavior is a balanced result of materials and foam structural support strength. An analytical model of splitting tensile strength with structural parameters is derived, which implies its dependence on cell size and critical stress intensity factor of strut materials.

Cu2Se has recently received much attention due to its excellent thermal and electrical transmission characteristics. In this study, Cu2Se compounds were synthesized by vacuum melt-annealing method and sintered by discharge plasma sintering (SPS) in the 793–1093 K temperature range. The effects of SPS temperatures of 793, 893, 993, and 1093 K on the phase composition, microstructure, band structure, and thermoelectric properties of Cu2Se samples, as well as the test stability of Cu2Se at high temperatures were studied. The results show that the sintering temperature affects the thermoelectric properties, microstructure, and energy band structure of Cu2Se compounds. The samples show many component segregations with nano-micron size and irregular morphology. According to conductance ratio analysis, the primary mechanism of carrier scattering is ionized impurity scattering, consistent with the change of carrier mobility with the test temperature. Combined with the XPS analysis results and defect balance equation, the mechanism of the test temperature depends on carrier concentration, and the carrier scattering mechanism is reasonably explain. The lattice thermal conductivity of Cu2Se materials is relatively low at all sintering temperatures due to nano-micron segregation and the presence of high-mobility Cu ions. Especially at the sintering temperature of 893 K, the segregation of nano-micron components is the most uniform, and the segregation particle size is the smallest, effectively enhancing the phonon scattering and making the lattice thermal conductivity the lowest. At 873 K, the ZT of Cu2Se sintered at 893 K reaches a maximum value of 1.34.

Abstract Phase transition and floral induction in citrus requires several years of juvenility after germination. Such a long period of juvenility has been a major hindrance to its genetic improvement program. Studies have shown that miR156 along with its downstream genes SQUAMOSA PROMOTER BINDING PROTEINS (SBP) and SBP-LIKE (SPL) mediate the phase transition and floral induction process in plants. Our current study has systematically analyzed SPLs in 15 different citrus-related species, systematically annotated them based on their close homology to their respective Arabidopsis orthologs, and confirmed the functional attributes of the selected members in floral precocity. The majority of the species harbored 15 SPLs. Their cis-element assessment suggested the involvement of the SPLs in diverse developmental and physiological processes in response to different biotic and abiotic cues. Among all, SPL5, SPL9, and SPL11 stood out as consistently differentially expressed SPLs in the adult and young tissues of different citrus-related species. Independent overexpression of their F. hindsii orthologs (FhSPL5, FhSPL9, and FhSPL11) brought an enhanced expression of endogenous FLOWERING LOCUS T leading to the significantly precocious flowering in transgenic Arabidopsis lines. Future study of the genes in the citrus plant itself is expected to conclude the assessments made in the current study. Graphical Abstract

Abstract Circular RNA HIPK3 (circHIPK3) mediates the progression of multiple cancers, including bladder cancer, by regulating cell migration, autophagy and epithelial mesenchymal transition. However, the mechanism by which circHIPK3 regulates autophagy in bladder cancer cells remains unclear. Autophagy is a common self-protection mechanism in eukaryotic cells and is essential for cell survival and death regulation. However, it is unclear whether circHIPK3 affects the level of autophagy in bladder cancer through binding proteins, and the potential regulatory mechanism is unknown. Here, we found that circHIPK3 levels were significantly lower and autophagy-related proteins were significantly upregulated in bladder cancer cells and tissues compared to normal controls. CircHIPK3 downregulation promoted bladder cancer cell proliferation, while circHIPK3 overexpression inhibited proliferation. CircHIPK3 overexpression significantly suppressed autophagy in bladder cancer cells. Overexpression of circHIPK3 did not affect VCP protein expression but inhibited the VCP/Beclin 1 interaction. VCP also stabilized Beclin 1 and promoted autophagy in bladder cancer cells by downregulating ataxin-3. Thus, circHIPK3 may play an important role in bladder cancer by inhibiting VCP-mediated autophagy.

The external pressure and doping effect have been studied on the lattice structure of multiferroic Bi5Ti3−2xFe1+xNbxO15 (BTFNx) ceramics. Based on the x-ray diffraction and the Raman spectroscopic evidence, it is confirmed that the doping-induced lattice deformation is closely related to the concentrations of the Nb5+ and Fe3+ ions. The Bi5Ti3FeO15 (BTF) ceramic transits from orthorhombic (O, A21am) - O and tetragonal (T) - T (I4/mmm) with pressure, showing the intermediate phase coexistence at a wide pressure range of 4.5–14.8 GPa, while for BTFN0.6 ceramics, it is O (Fmm2) - O and T - T(I4/mmm) having the phase coexistence at 6–18 GPa. The ionic substitution, phase diagram and the evolution of phonon, lattice symmetry, and stability of BTFNx ceramics have been systematically observed and studied under the internal and external factors. Our work provides a comprehensive understanding of the structural and physical functionality for the development and optimization of multiferroic four-layer compounds BTF material systems.

Abstract Plant anthers are composed of different specialized cell types with distinct roles in plant reproduction. High temperature (HT) stress causes male sterility, resulting in crop yield reduction. However, the spatial expression atlas and regulatory dynamics during anther development and in response to HT remain largely unknown. Here, the first single‐cell transcriptome atlas and chromatin accessibility survey in cotton anther are established, depicting the specific expression and epigenetic landscape of each type of cell in anthers. The reconstruction of meiotic cells, tapetal cells, and middle layer cell developmental trajectories not only identifies novel expressed genes, but also elucidates the precise degradation period of middle layer and reveals a rapid function transition of tapetal cells during the tetrad stage. By applying HT, heterogeneity in HT response is shown among cells of anthers, with tapetal cells responsible for pollen wall synthesis are most sensitive to HT. Specifically, HT shuts down the chromatin accessibility of genes specifically expressed in the tapetal cells responsible for pollen wall synthesis, such as QUARTET 3 (QRT3) and CYTOCHROME P450 703A2 (CYP703A2), resulting in a silent expression of these genes, ultimately leading to abnormal pollen wall and male sterility. Collectively, this study provides substantial information on anthers and provides clues for heat‐tolerant crop creation.

Atherosclerosis is a chronic inflammatory disease characterized by endothelial dysfunction and plaque formation. Under pro-inflammatory conditions, endothelial cells can undergo endothelial-to-mesenchymal transition (EndMT), contributing to atherosclerosis development. However, the specific regulatory mechanisms by which EndMT contributes to atherosclerosis remain unclear and require further investigation. Dan-Shen-Yin (DSY), a traditional Chinese herbal formula, is commonly used for cardiovascular diseases, but its molecular mechanisms remain elusive. Emerging evidence indicates that competing endogenous RNA (ceRNA) networks play critical roles in atherosclerosis pathogenesis. In this study, we constructed an EndMT-associated ceRNA network during atherosclerosis progression by integrating gene expression profiles from the Gene Expression Omnibus (GEO) database and weighted gene co-expression network analysis. Functional enrichment analysis revealed this EndMT-related ceRNA network is predominantly involved in inflammatory responses. ROC curve analysis showed the identified hub genes can effectively distinguish between normal vasculature and atherosclerotic lesions. Furthermore, Kaplan-Meier analysis demonstrated that high expression of IL1B significantly predicts ischemic events in atherosclerosis. Molecular docking revealed most DSY bioactive components can bind key EndMT-related lncRNAs, including AC003092.1, MIR181A1HG, MIR155HG, WEE2-AS1, and MIR137HG, suggesting DSY may mitigate EndMT in atherosclerosis by modulating the ceRNA network.

Abstract Introduction Numerous studies have found that expert players anticipate better than novices. If more accurate prediction represents performance monitoring of experts, what are the advantages of elite basketball players in identifying and processing available cues? There is still a lack of sufficient evidence. This study examined the visual search in basketball players and explored the performance monitoring of action anticipation, adopting an expert–novice paradigm and eye‐movement technology. Methods Forty basketball players were recruited in this study: 20 in the expert group and 20 in the novice group. Participants were asked to predict the outcome of videotaped basketball throws and their accuracy and eye‐movement characteristics were record. Results The accuracy of the expert was significantly higher than that of the novice. The experts were able to instantly search and identify important cues in anticipation, and the gaze area of the experts was concentrated on the area of interest of the body. Additionally, the expert group showed long, repetitive, and rapid visual search of vital information, and improved their performance of the task. Conclusion The experts could monitor the performance of prediction by grabbing vital shooting information (such as the body of a player). The results suggest the athletes and coaches that if they want to improve the ability of prediction, it may be useful to shift their focus of attention from ball trajectory to body action.

Microscopic vision has been widely applied in precision assembly. To achieve sufficiently high resolution in measurements for precision assembly when the sizes of the parts involved exceed the field of view of the vision system, an image mosaic technique must be used. In this paper, a method for constructing an image mosaic with non-overlapping areas with enhanced efficiency is proposed. First, an image mosaic model for the part is created using a geometric model of the measurement system installed on a X-Y-Z precision stages with high repeatability, and a path for image acquisition is established. Second, images are captured along the same path for a specified calibration plate, and an entire image is formed based on the given model. The measurement results obtained from the specified calibration plate are utilized to identify mosaic errors and apply compensation for the part requiring measurement. Experimental results show that the maximum error is less than 4 μm for a camera with pixel equivalent 2.46 μm, thereby demonstrating the accuracy of the proposed method. This image mosaic technique with non-overlapping regions can simplify image acquisition and reduce the workload involved in constructing an image mosaic.

‘Whangkeumbae’ (Pyrus pyrifolia) is a variety of sand pear fruit well-known for its smooth surface and good taste. However, the fruit quality is adversely affected by postharvest ethylene production. Therefore, improving postharvest shelf life by regulating fruit senescence is critical to promoting the ‘Whangkeumbae’ fruit industry. Here, we investigated the effect of salicylic acid (SA) spray on fruit senescence in sand pears during room temperature shelf life. Exogenous SA reduced polyphenol oxidase (PPO) activity and malondialdehyde (MDA) content during room temperature shelf life. Additionally, SA effectively maintained the fruit skin coloration and increased the activity of antioxidant enzymes, such as superoxide dismutase (SOD), peroxidase (POD), catalase (CAT), and ascorbate peroxidase (APX). SA treatment inhibited PpPPO1 expression and upregulated PpSOD1, PpAPX6, and PpGST2 expression. Furthermore, SA application downregulated the expression of PpACO2, PpEIN3a, PpNCED1, and PpAOC2, while upregulating PpNPR-1, PpTAR2, and PpCOMT1 during room temperature shelf life. SA treatment also influenced cell wall metabolism and modification genes by inhibiting PpPG1, PpPME2, and PpCEL3 and inducing PpPGIP1 expression. Additionally, SA treatment affected sugar and acid metabolism genes and increased the expression of PpSPS1, PpSUS1, PpSOT1, PpTMT4, PpSWEET15, and PpcyNAD-MDH, but suppressed the expression of PpcyNADP-ME. The Pearson correlation analysis indicated that PPO activity and MDA content were positively correlated with the expression of PpPPO1, PpACO2, PpEIN3a, PpNCED1, PpAOC2, PpPG1, PpPME2, PpCEL3, and PpcyNDA-MDH. Conversely, these factors were negatively associated with the activities of SOD, POD, CAT, and APX, as well as the expression levels of PpSOD1, PpPOD1, PpCAT1, PpAPX6, PpGST2, PpNPR-1, PpTAR2, PpCOMT1, PpPGIP1, PpSPS1, PpSUS1, PpSOT1, PpTMT4, PpSWEET15, and PpcyNAD-MDH. Our results reveal that exogenous SA could delay fruit senescence in sand pear fruit by regulating various biochemical and molecular mechanisms and can be used to effectively extend fruit shelf life during room temperature storage. However, further research is necessary to determine whether the fruits sprayed with SA are suitable for direct human consumption.

The development of the oxy-fuel porous media combustion technique not only takes advantage of the characteristics of porous media combustion, such as a relatively low lean-burn limit and small volume, but also dramatically facilitates carbon capture and storage. In this paper, a two-layer porous burner model is established, in which a two-temperature equation model is adopted for calculation purposes. Differences in combustion behaviour between oxy-fuel and air-fuel conditions are compared. The results show that the difference in physical properties between CO2 and air is the main reason for the significant variation of combustion behaviours under the conditions of oxy-fuel compared to air-fuel. The specific performance is lower combustion temperature and flame propagation speed. The temperature under oxy-fuel combustion conditions is 300 K lower than that under air-fuel combustion conditions at an equivalence ratio of 0.6, and the stable range of oxy-fuel combustion is only approximately 50% of air-fuel combustion. The impact of porous media material parameters on combustion behavior has been investigated. These variables include the equivalence ratio, material thermal conductivity, volume heat transfer coefficient, and extinction coefficient, while the ratio of O2/CO2 remains fixed at 0.21/0.79. The influence of these variables on the stable velocity range and temperature field is consistent, but a large difference in values occurs. Reducing the thermal resistance of the burner by adjusting the properties of the porous matrix can increase the velocity limit of stable combustion. However, even if the thermal conductivity and extinction coefficient are increased by 5 times, there will be no significant impact on the stable range. Reducing the pore size of the combustion zone by 50% will increase the stable range by over 100%.

As a significant research direction in remote sensing fields, unmanned aerial vehicles (UAVs) tracking has achieved rapid development in recent years. However, due to limited power and computation resources on aerial platforms, the tracking methods deployed on UAVs usually require high computational efficiency and performance. In addition, various challenges (i.e., similar object, background clutter, and occlusion) have inevitably occurred during the UAV tracking phase. Therefore, considering the above issues comprehensively, this article proposes a dynamic aberrance-repressed temporal regularized correlation filter (CF) to achieve stable tracking in UAV remote sensing videos. First, we have introduced the aberrance-repressed temporal regularizations into the discriminative CF framework. Second, a novel objective loss function is constructed to adjust the strength of each regularization for training the filter. Then, a new judgment mechanism based on the response variation is exploited to reflect the response fluctuation and applied to tune parameters of both regularizations. Finally, comprehensive experiments are done on three different UAV benchmarks, i.e., UAV123@10fps, UAVDT, and VisDrone2018, to verify the performance of our tracker and have demonstrated that our tracker achieves superior performance against other total 25 state-of-the-art trackers while reaching $\sim$35 FPS on a single CPU.

Cavitation has been widely used in wastewater degradation, material synthesis and biomedical field under dual-frequency acoustic excitation. The applications of cavitation are closely related to the power (i.e. the rate of internal energy accumulation) during bubble collapse. The Keller–Miksis equation considering liquid viscosity, surface tension and liquid compressibility is used to describe the radial motion of the bubble. The model is built in predicting the power during bubble collapse under dual-frequency acoustic excitation. The influences of parameters (i.e. phase difference, frequency difference, and amplitude ratio) on the power are investigated numerically. With the increase of phase difference, the power can be fluctuated in a wide range at all conditions. Three typical characteristics of the power appear under the effects of frequency difference and amplitude ratio. With the increase of amplitude ratio, if the frequency difference is small, the power has two maximum values; and if the frequency difference is medium, there is a maximum value. Otherwise, the power monotonously decreases. The results can provide theoretical references for the selections of experimental parameters of sonoluminescence and sonochemistry in the dual-frequency acoustic field.

High-purity and high-yield boron nitride nanotubes with large aspect ratio were prepared by a facile two-step process, including the synthesis of boron/nickel containing precursors by precipitation reactions and subsequent thermally catalytic chemical vapor deposition reactions. The influence of catalyst content and annealing temperature on the phase composition and microstructure of the products were investigated. The results show that it is difficult to exert the catalytic effect of nickel-based catalyst at low temperatures (

The recent development of imaging and sequencing technologies enables systematic advances in the clinical study of lung cancer. Meanwhile, the human mind is limited in effectively handling and fully utilizing the accumulation of such enormous amounts of data. Machine learning-based approaches play a critical role in integrating and analyzing these large and complex datasets, which have extensively characterized lung cancer through the use of different perspectives from these accrued data. In this review, we provide an overview of machine learning-based approaches that strengthen the varying aspects of lung cancer diagnosis and therapy, including early detection, auxiliary diagnosis, prognosis prediction, and immunotherapy practice. Moreover, we highlight the challenges and opportunities for future applications of machine learning in lung cancer.

Abstract Background Diverse drug vulnerabilities owing to the Chromatin regulators (CRs) genetic interaction across various cancers, but the identification of CRs genetic interaction remains challenging. Methods In order to provide a global view of the CRs genetic interaction in cancer cells, we developed a method to identify potential drug response-related CRs genetic interactions for specific cancer types by integrating the screen of CRISPR-Cas9 and pharmacogenomic response datasets. Results Totally, 625 drug response-related CRs synthetic lethality (CSL) interactions and 288 CRs synthetic viability (CSV) interactions were detected. Systematically network analysis presented CRs genetic interactions have biological function relationship. Furthermore, we validated CRs genetic interactions induce multiple omics deregulation in The Cancer Genome Atlas. We revealed the colon adenocarcinoma patients (COAD) with mutations of a CRs set (EP300, MSH6, NSD2 and TRRAP) mediate a better survival with low expression of MAP2 and could benefit from taxnes. While the COAD patients carrying at least one of the CSV interactions in Vorinostat CSV module confer a poor prognosis and may be resistant to Vorinostat treatment. Conclusions The CRs genetic interaction map provides a rich resource to investigate cancer-associated CRs genetic interaction and proposes a powerful strategy of biomarker discovery to guide the rational use of agents in cancer therapy.

Resistance to gemcitabine is the main challenge of chemotherapy for pancreatic ductal adenocarcinoma (PDAC). Hence, the development of a response signature to gemcitabine is essential for precision therapy of PDAC. However, existing quantitative signatures of gemcitabine are susceptible to batch effects and variations in sequencing platforms. Therefore, based on within‐sample relative expression ordering of pairwise genes, we developed a transcriptome‐based gemcitabine signature consisting of 28 gene pairs (28‐GPS) that could predict response to gemcitabine for PDAC at the individual level. The 28‐GPS was superior to previous quantitative signatures in terms of classification accuracy and prognostic performance. Resistant samples classified by 28‐GPS showed poorer overall survival, higher genomic instability, lower immune infiltration, higher metabolic level and higher‐fidelity DNA damage repair compared with sensitive samples. In addition, we found that gemcitabine combined with phosphoinositide 3‐kinase (PI3K) inhibitor may be an alternative treatment strategy for PDAC. Single‐cell analysis revealed that cancer cells in the same PDAC sample showed both the characteristics of sensitivity and resistance to gemcitabine, and the activation of the TGFβ signalling pathway could promote progression of PDAC. In brief, 28‐GPS could robustly determine whether PDAC is resistant or sensitive to gemcitabine, and may be an auxiliary tool for clinical treatment.

Abstract Stratified thermal energy storage (TES) tanks are widely used in thermal power plants to enhance the electric power peak load shifting capability and integrate high renewable energy shares. In this study, a data‐driven surrogate modeling and optimization study of the unequal diameter radial diffuser previously proposed by the present authors is conducted. First, based on the orthogonal experimental design, numerical experiments are performed to generate the performance database. Then, the database is used to establish the data‐driven surrogate model via the support vector machine. Subsequently, the single‐objective optimization and multiobjective optimization of an unequal diameter radial diffuser are conducted using the genetic algorithm. For the single‐objective optimization, the optimal thermocline thickness is 0.829 m when the diameter ratio of the long baffle and the tank is 0.426, the diameter ratio of the short baffle and the long baffle is 0.823, and the distance between the two baffles is 228.51 mm. For multiobjective optimization, the obtained Pareto optimal solutions are obtained. Under the premise of maintaining excellent thermal stratification, the selected Point C can reduce the steel cost by 88.1%. The research results are helpful for designing efficient and economical unequal diameter radial diffusers for TES tanks.

Straw strip mulching (SM) is a new mulching technology. From 2012 to 2018, SM’s effects on soil moisture and temperature and production performances were compared with other mulching practices, using three treatments: full-cover plastic mulch (PM), no mulch with wheat sown in rows as the control (CK), and SM with 50% to 59% of the field area mulched. Compared with CK, on average over six growing seasons, SM and PM increased grain yield by 27.0% and 21.7%, straw yield by 21.6% and 22.6%, kernels ha−1 by 26.6% and 19.0%, net income by 29.8% and −25.0%, soil temperature at 5 cm by −1.5 °C and 0.2 °C from overwintering to maturity, and soil water storage at 0–200 cm by 25 and 22 mm, respectively. The increase in soil moisture in SM and PM was greater in the early period (overwintering to jointing) than in the later period (booting to maturity) and at 0 to 120 cm than at 120–200 cm in the early period. Although the mean evapotranspiration of whole growth period across six seasons was similar among treatments, SM and PM increased water consumption during the key formation period of yield components after overwintering by 16 and 32 mm, respectively, while reducing it before overwintering. Compared with CK, SM and PM had the effects of warming during overwintering and cooling after jointing. By increasing water consumption after overwintering and ratio of transpiration to evapotranspiration and providing favorable soil temperature for multiple growth stages and more sufficient soil moisture, SM and PM promoted vegetative growth and increased kernels ha−1, the main mechanisms by which SM and PM increased grain yield relative to CK. Relative to PM, SM is a more economically beneficial and environment-friendly technology for dryland wheat production.

Black rice is known as a health-promoting food for its abundant content of anthocyanins. The main objective of this paper is to get functional and eco-friendly materials dyed with black rice extract. In this research work, chitosan-modified cotton fabric was dyed with the black rice extract, and the fabric’s CIELab color characteristic values (L*, a*, b*, C*), color strength (K/S) value, and UPF value were investigated closely. The K/S value and UPF value of dyed samples depend on temperature, time, and pH. It is worth noting that the acid medium favored the dyeing to obtain a purple-red color and achieve a larger K/S value and UPF value. The results showed that chitosan-modified cotton fabric dyed with black rice extract had good UV resistance and color fastness.

Some epidemiological studies support a relationship between nickel exposure and diabetes in the general population. To address this, we tested the association of nickel exposure with diabetes in 10,890 adults aged ≥ 18 years old from the China National Human Biomonitoring study conducted in 2017–2018. Urinary nickel concentrations and fasting blood glucose (FBG) were measured, and lifestyle and demographic data were collected. Weighted logistic and linear regressions were used to estimate the associations of urinary nickel levels with diabetes prevalence and FBG. Restricted cubic splines (RCS) were used to test for the dose-response relationship. The odd ratio (95% confidence interval [CI]) of diabetes for the highest versus lowest quartiles of urinary nickel concentrations was 1.74 (1.28, 2.36) in the multivariate model (p trend =0.001). Each one-unit increase in log-transformed urinary nickel concentrations was associated with a 0.36 (0.17, 0.55) mmol/L elevation in FBG. The RCS curves showed a monotonically increasing dose-response relationship of urinary nickel with diabetes as well as FBG levels, and then tended to flatten after about 4.75 μg/L of nickel exposure. The nickel-diabetes association was stronger in individuals with lower than those with higher rice consumption (OR: 2.39 vs. 1.72). Our study supports a positive association between nickel exposure and diabetes prevalence in Chinese adults, especially in individuals with lower rice consumption. Further large-scale prospective studies are needed to validate our findings.

Abstract Background From an economic perspective, cotton is one of the most important crops in the world. The fertility of male reproductive organs is a key determinant of cotton yield. Anther dehiscence or indehiscence directly determines the probability of fertilization in cotton. Thus, rapid and accurate identification of cotton anther dehiscence status is important for judging anther growth status and promoting genetic breeding research. The development of computer vision technology and the advent of big data have prompted the application of deep learning techniques to agricultural phenotype research. Therefore, two deep learning models (Faster R-CNN and YOLOv5) were proposed to detect the number and dehiscence status of anthers. Result The single-stage model based on YOLOv5 has higher recognition speed and the ability to deploy to the mobile end. Breeding researchers can apply this model to terminals to achieve a more intuitive understanding of cotton anther dehiscence status. Moreover, three improvement strategies are proposed for the Faster R-CNN model, where the improved model has higher detection accuracy than the YOLOv5 model. We have made three improvements to the Faster R-CNN model and after the ensemble of the three models and original Faster R-CNN model, R2 of “open” reaches to 0.8765, R2 of “close” reaches to 0.8539, R2 of “all” reaches to 0.8481, higher than the prediction results of either model alone, which are completely able to replace the manual counting results. We can use this model to quickly extract the dehiscence rate of cotton anthers under high temperature (HT) conditions. In addition, the percentage of dehiscent anthers of 30 randomly selected cotton varieties were observed from the cotton population under normal conditions and HT conditions through the ensemble of the Faster R-CNN model and manual counting. The results show that HT decreased the percentage of dehiscent anthers in different cotton lines, consistent with the manual method. Conclusions Deep learning technology have been applied to cotton anther dehiscence status recognition instead of manual methods for the first time to quickly screen HT–tolerant cotton varieties. Deep learning can help to explore the key genetic improvement genes in the future, promoting cotton breeding and improvement.

Abstract The recent advancement in spatial transcriptomics technology has enabled multiplexed profiling of cellular transcriptomes and spatial locations. As the capacity and efficiency of the experimental technologies continue to improve, there is an emerging need for the development of analytical approaches. Furthermore, with the continuous evolution of sequencing protocols, the underlying assumptions of current analytical methods need to be re-evaluated and adjusted to harness the increasing data complexity. To motivate and aid future model development, we herein review the recent development of statistical and machine learning methods in spatial transcriptomics, summarize useful resources, and highlight the challenges and opportunities ahead.

Inspection is a crucial process to ensure product quality. In the precision assembly of an optic-mechanical device, a part with micro multi-section arcs needs to be inspected and assembled into another part. Actually, because of machining errors, including dimensional and geometric shapes, can lead to complex deformation modes for parts with micro multi-section arcs, posing challenges to their inspection. Furthermore, inconsistencies in feature images in microscopic vision may complicate the extraction of the Region of Interest (ROI). To address these issues, this paper proposes an ROI extraction method based on the CAD model for rough positioning of feature points and connected region detection for refinement. Subsequently, based on feature points, the CAD model is used again to obtain the ROI. For inspection purposes, this paper proposes a method suitable for micro multi-section arcs based on assembly fit requirements. Experimental testing was performed on parts with eight-section arcs and mirrors to verify the effectiveness of the proposed method. This method provides a suitable solution for the inspection of micro multi-section arcs in precision assembly with the potential to improve the accuracy of the inspection results.

Background: The associations of legacy per- and polyfluoroalkyl substances (PFAS) with lipid metabolism are controversial, and there is little information about the impact of emerging PFAS (6:2 Cl-PFESA) on lipid metabolism in China. Objectives: We aimed to explore the associations of legacy and emerging PFAS with lipid profiles and dyslipidemia in Chinese adults. Methods: We included 10,855 Chinese participants aged 18 years and above in the China National Human Biomonitoring. The associations of 8 PFAS with 5 lipid profiles and 4 dyslipidemia were investigated using weighted multiple linear regression or weighted logistic regression, and the dose–response associations were investigated using restricted cubic spline model. Results: Among the 8 PFAS, the concentration of PFOS was the highest, with a geometric mean of 5.15 ng/mL, followed by PFOA and 6:2 Cl-PFESA, which were 4.26 and 1.63 ng/mL, respectively. Legacy (PFOA, PFOS, PFUnDA) or emerging (6:2 Cl-PFESA) PFAS were associated with lipid profiles (TC, LDL-C, HDL-C, non HDL-C) and dyslipidemia (high LDL-C, high TC, low HDL-C), and their effects on TC were most obvious. TC concentration increased by 0.595 mmol/L in the highest quartile (Q4) of PFOS when compared with the lowest quartile (Q1), (95 % CI:0.396, 0.794). Restricted cubic spline models showed that PFAS are nonlinearly associated with TC, non HDL-C, LDL-C and HDL-C, and that the lipid concentrations tend to be stable when PFOS and PFOA were > 20 ng/mL well as when the 6:2 Cl-PFESA level was > 10 ng/mL. The positive associations between PFAS mixtures and lipid profiles were also significant. Conclusions: Single and mixed exposure to PFAS were positively associated with lipid profiles, and China's unique legacy PFAS substitutes (6:2 Cl-PFESA) contributed less to lipid profiles than legacy PFAS. In the future, cohort studies will be needed to confirm our findings.

In recent years, with increasing passenger travel demand, high-speed railways have developed rapidly. The stop planning and timetabling problems are the core contents of high-speed railway transport planning and have important practical significance for improving efficiency of passenger travel and railway operation Dong et al. (2020). This study proposes a collaborative optimization approach that can be divided into two phases. In the first phase, a mixed-integer nonlinear programming model is constructed to obtain a stop plan by minimizing the total passenger travel time. The constraints of passenger origin-destination (OD) demand, train capacity, and stop frequency are considered in the first phase. In the second phase, the train timetable is optimized after the stop plan is obtained. A multiobjective mixed-integer linear optimization model is formulated by minimizing the total train travel time and the deviation between the expected and actual departure times from the origin station for all trains. Multiple types of trains and more refined headways are considered in the timetabling model. Finally, the approach is applied to China's high-speed railway, and the GUROBI optimizer is used to solve the models in the above two stages. By analyzing the results, the total passenger travel time and train travel time decreased by 2.81% and 3.34% respectively. The proposed method generates a more efficient solution for the railway system.

Salicylic acid (SA) and ethylene (ET) are crucial fruit senescence hormones. SA inhibited ET biosynthesis. However, the mechanism of SA delaying fruit senescence is less known. ETHYLENE INSENSITIVE 3 (EIN3), a key positive switch in ET perception, functions as a transcriptional activator and binds to the primary ET response element that is present in the promoter of the ETHYLENE RESPONSE FACTOR1 gene. In this study, a gene encoding putative EIN3 protein was cloned from sand pear and designated as PpEIN3a. The deduced PpEIN3a contains a conserved EIN3 domain. The evolutionary analysis results indicated that PpEIN3a belonged to the EIN3 superfamily. Real-time quantitative PCR analysis revealed that the accumulation of PpEIN3a transcripts were detected in all tissues of this pear. Moreover, PpEIN3a expression was regulated during fruit development. Interestingly, the expression of PpEIN3a was downregulated by SA but upregulated by ET, auxin, and glucose. Additionally, the contents of free and conjugated SA were higher than those of the control after SA treatment. While the content of ET and auxin (indole-3-acetic acid, IAA) dramatically decreased after SA treatment compared with control during fruit senescence. The content of glucose increased when fruit were treated by SA for 12 h and then there were no differences between SA treatment and control fruit during the shelf life. SA also delayed the decrease in sand pear (Pyrus pyrifolia Nakai. ‘Whangkeumbae’) fruit firmness. The soluble solid content remained relatively stable between the SA treated and control fruits. This study showed that SA plays an antagonistic role toward ET, auxin, and glucose in regulating the expression of PpEIN3a to delay fruit senescence.

Pancreatic cancer (PC) with homologous recombination deficiency (HRD) has been reported to benefit from poly ADP-ribose polymerase (PARP) inhibitors. However, accurate identification of HRD status for PC patients from the transcriptional level is still a great challenge. Here, based on a relative expression ordering (REO)-based algorithm, we developed an HRD signature including 24 gene pairs (24-GPS) using PC transcriptional profiles from The Cancer Genome Atlas (TCGA). HRD samples classified by 24-GPS showed worse overall survival (p = 4.4E-3 for TCGA; p = 1.2E-3 for International Cancer Genome Consortium-Australia cohort; p = 6.4E-2 for GSE17891; p = 7.5E-2 for GSE57495) and higher HRD scores than non-HRD samples (p = 1.4E-4). HRD samples showed highly unstable genomic characteristics and also displayed HRD-related alterations at the epigenomic and proteomic levels. Moreover, HRD cell lines identified by 24-GPS tended to be sensitive to PARP inhibitors (p = 6.6E-2 for olaparib; p = 2.6E-3 for niraparib). Compared with the non-HRD group, the HRD group presented lower immune scores and CD4/CD8 T cell infiltration proportion. Interestingly, PC tumor cells with co-inhibition of PARP-related genes and ATR showed reduced survival ability. In conclusion, 24-GPS can robustly identify PC patients with HRD status at the individualized level.