159 results on '"Wanzhi Cai"'
Search Results
2. Comparative genomic analyses on assassin bug Rhynocoris fuscipes (Hemiptera: Reduviidae) reveal genetic bases governing the diet-shift
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Ling Ma, Yuange Duan, Yunfei Wu, Hailin Yang, Haibin Deng, Xinzhi Liu, Tianyou Zhao, Yisheng Zhao, Li Tian, Fan Song, Teiji Sota, Wanzhi Cai, and Hu Li
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Entomology ,Nucleic acids ,Genomics ,Epigenetics ,Phylogenetics ,Biological classification ,Science - Abstract
Summary: Genetic basis underlying the biodiversity and phenotypic plasticity are fascinating questions in evolutionary biology. Such molecular diversity can be achieved at multi-omics levels. Here, we sequenced the first chromosome-level genome of assassin bug Rhynocoris fuscipes, a polyphagous generalist predator for biological control of agroecosystems. Compared to non-predatory true bugs Apolygus lucorum and Riptortus pedestris, the R. fuscipes-specific genes were enriched in diet-related genes (e.g., serine proteinase, cytochrome P450) which had higher expression level and more exons than non-diet genes. Extensive A-to-I RNA editing was identified in all three species and showed enrichment in genes associated with diet in R. fuscipes, diversifying the transcriptome. An extended analysis between five predaceous and 27 phytophagous hemipteran species revealed an expansion of diet-related genes in R. fuscipes. Our findings bridge the gap between genotype and phenotype, and also advance our understanding on genetic and epigenetic bases governing the diet shifts in ture bugs.
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- 2024
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3. Meningioma achieves malignancy and erastin-induced ferroptosis resistance through FOXM1-AURKA-NRF2 axis
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Yangfan Ye, Lei Xu, Liuchao Zhang, Pengzhan Zhao, Wanzhi Cai, Guoqiang Fu, Tian Wang, Zeqiang Tao, Wenqian Shi, Wei Gu, Jingming Hu, Guangyao Yuan, Yutian Wei, Ke Xu, Zhongyuan Bao, Honglu Chao, Ning Liu, Lin Zhao, Yiming Tu, and Jing Ji
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Meningioma ,Ferroptosis ,Protein kinase ,AURKA ,NRF2 ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
The oncogene Aurora kinase A (AURKA) has been implicated in various tumor, yet its role in meningioma remains unexplored. Recent studies have suggested a potential link between AURKA and ferroptosis, although the underlying mechanisms are unclear. This study presented evidence of AURKA upregulation in high grade meningioma and its ability to enhance malignant characteristics. We identified AURKA as a suppressor of erastin-induced ferroptosis in meningioma. Mechanistically, AURKA directly interacted with and phosphorylated kelch-like ECH-associated protein 1 (KEAP1), thereby activating nuclear factor erythroid 2 related factor 2 (NFE2L2/NRF2) and target genes transcription. Additionally, forkhead box protein M1 (FOXM1) facilitated the transcription of AURKA. Suppression of AURKA, in conjunction with erastin, yields significant enhancements in the prognosis of a murine model of meningioma. Our study elucidates an unidentified mechanism by which AURKA governs ferroptosis, and strongly suggests that the combination of AURKA inhibition and ferroptosis-inducing agents could potentially provide therapeutic benefits for meningioma treatment.
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- 2024
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4. Natural selection and genetic diversity maintenance in a parasitic wasp during continuous biological control application
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Bingyan Li, Yuange Duan, Zhenyong Du, Xuan Wang, Shanlin Liu, Zengbei Feng, Li Tian, Fan Song, Hailin Yang, Wanzhi Cai, Zhonglong Lin, and Hu Li
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Science - Abstract
Abstract Aphidius gifuensis is a parasitoid wasp and primary endoparasitoid enemy of the peach potato aphid, Myzus persicae. Artificially reared, captive wasps of this species have been extensively and effectively used to control populations of aphids and limit crop loss. However, the consequences of large-scale releasing of captive A. gifuensis, such as genetic erosion and reduced fitness in wild populations of this species, remains unclear. Here, we sequence the genomes of 542 A. gifuensis individuals collected across China, including 265 wild and 277 human-intervened samples. Population genetic analyses on wild individuals recovered Yunnan populations as the ancestral group with the most complex genetic structure. We also find genetic signature of environmental adaptation during the dispersal of wild populations from Yunnan to other regions. While comparative genomic analyses of captive wasps revealed a decrease in genetic diversity during long-term rearing, population genomic analyses revealed signatures of natural selection by several biotic (host plants) or abiotic (climate) factors, which support maintenance of the gene pool of wild populations in spite of the introduction of captive wasps. Therefore, the impact of large-scale release is reduced. Our study suggests that A. gifuensis is a good system for exploring the genetic and evolutionary effects of mass rearing and release on species commonly used as biocontrol agents.
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- 2024
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5. A full repertoire of Hemiptera genomes reveals a multi-step evolutionary trajectory of auto-RNA editing site in insect Adar gene
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Ling Ma, Caiqing Zheng, Shiwen Xu, Ye Xu, Fan Song, Li Tian, Wanzhi Cai, Hu Li, and Yuange Duan
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a-to-i rna editing ,adar auto-recoding ,feedback loop ,evolutionary trajectory ,hemiptera ,Genetics ,QH426-470 - Abstract
Adenosine-to-inosine (A-to-I) RNA editing, mediated by metazoan ADAR enzymes, is a prevalent post-transcriptional modification that diversifies the proteome and promotes adaptive evolution of organisms. The Drosophila Adar gene has an auto-recoding site (termed S>G site) that forms a negative-feedback loop and stabilizes the global editing activity. However, the evolutionary trajectory of Adar S>G site in many other insects remains largely unknown, preventing us from a deeper understanding on the significance of this auto-editing mechanism. In this study, we retrieved the well-annotated genomes of 375 arthropod species including the five major insect orders (Lepidoptera, Diptera, Coleoptera, Hymenoptera and Hemiptera) and several outgroup species. We performed comparative genomic analysis on the Adar auto-recoding S>G site. We found that the ancestral state of insect S>G site was an uneditable serine codon (unSer) and that this state was largely maintained in Hymenoptera. The editable serine codon (edSer) appeared in the common ancestor of Lepidoptera, Diptera and Coleoptera and was almost fixed in the three orders. Interestingly, Hemiptera species possessed comparable numbers of unSer and edSer codons, and a few ‘intermediate codons’, demonstrating a multi-step evolutionary trace from unSer-to-edSer with non-synchronized mutations at three codon positions. We argue that the evolution of Adar S>G site is the best genomic evidence supporting the ‘proteomic diversifying hypothesis’ of RNA editing. Our work deepens our understanding on the evolutionary significance of Adar auto-recoding site which stabilizes the global editing activity and controls transcriptomic diversity.
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- 2023
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6. Renicoris robustus, a new genus and species of the subfamily Harpactorinae (Hemiptera, Reduviidae) from China
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Jianyun Wang, Zhuo Chen, Ping Zhao, and Wanzhi Cai
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Zoology ,QL1-991 - Abstract
Renicoris gen. nov. and its type species Renicoris robustus sp. nov. (Hemiptera: Heteroptera: Reduviidae: Harpactorinae) from Yunnan, China, are described and illustrated. A key to separate the new genus and its closely related genera is provided.
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- 2023
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7. Taxonomic revision of the African assassin bug genus Fusius (Heteroptera: Reduviidae: Peiratinae)
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Yingqi Liu, Hu Li, and Wanzhi Cai
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Hemiptera ,taxonomy ,lectotype ,new synonym ,Afrotropical Region ,Zoology ,QL1-991 ,Botany ,QK1-989 - Abstract
The African assassin bug genus Fusius Stål, 1862 is revised after the examination of type specimens with redescriptions of four species. Lectotypes of Pirates (Fusius) H-flavum Reuter, 1881 and Pirates rubricosus Stål, 1855 are designated. The status of P. (Fusius) H-flavum Reuter, 1881 is revalidated with its current name as F. hflavus (Reuter, 1881) stat. rev. et comb. nov. Seven new synonyms are proposed: F. dilutus Miller, 1957 = F. gowdeyi Miller, 1957 syn. nov. = F. liberiensis Miller, 1957 syn. nov. = F. dilutus anonymus Dispons, 1969 syn. nov. = F. dilutus vicinus Dispons, 1969 syn. nov.; F. distinctus Miller, 1957 = F. sylvestris Miller, 1957 syn. nov.; F. hflavus (Reuter, 1881) = F. hargreavesi Miller, 1957 syn. nov.; F. rubricosus (Stål, 1855) = F. ugandensis Miller, 1957 syn. nov. A key is provided to separate the four species of this genus. Diagnosis and distribution of Fusius are briefly discussed.
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- 2023
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8. Differential adaptive RNA editing signals between insects and plants revealed by a new measurement termed haplotype diversity
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Yuange Duan, Ye Xu, Fan Song, Li Tian, Wanzhi Cai, and Hu Li
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RNA editing ,Arabidopsis thaliana ,Insect ,Nonsynonymous ,Haplotype diversity ,Restorative ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background C-to-U RNA editing in plants is believed to confer its evolutionary adaptiveness by reversing unfavorable DNA mutations. This “restorative hypothesis” has not yet been tested genome-wide. In contrast, A-to-I RNA editing in insects like Drosophila and honeybee is already known to benefit the host by increasing proteomic diversity in a spatial-temporal manner (namely “diversifying hypothesis”). Methods We profiled the RNA editomes of multiple tissues of Arabidopsis thaliana, Drosophila melanogaster, and Apis melifera. We unprecedentedly defined the haplotype diversity (HD) of RNA molecules based on nonsynonymous editing events (recoding sites). Results Signals of adaptation is confirmed in Arabidopsis by observing higher frequencies and levels at nonsynonymous editing sites over synonymous sites. Compared to A-to-I recoding sites in Drosophila, the C-to-U recoding sites in Arabidopsis show significantly lower HD, presumably due to the stronger linkage between C-to-U events. Conclusions C-to-U RNA editing in Arabidopsis is adaptive but it is not designed for diversifying the proteome like A-to-I editing in Drosophila. Instead, C-to-U recoding sites resemble DNA mutations. Our observation supports the restorative hypothesis of plant C-to-U editing which claims that editing is used for fixing unfavorable genomic sequences.
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- 2023
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9. Phylogeographic Pattern of the Assassin Bug Sycanus bifidus Inferred from Mitochondrial Genomes and Nuclear Genes
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Suyi Chen, Zhenyong Du, Ping Zhao, Xuan Wang, Yunfei Wu, Hu Li, and Wanzhi Cai
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Sycanus bifidus ,assassin bug ,Pleistocene glaciation ,phylogeography ,sea-level change ,climatic fluctuation ,Biology (General) ,QH301-705.5 - Abstract
The assassin bug Sycanus bifidus has a wide distribution across southern China. This study explored its distribution and evolution by analyzing mitochondrial and nuclear ribosomal RNA genes, revealing how Pleistocene climate and geological changes shaped its phylogeography. We identified two main clades, A and B, that diverged in the Middle Pleistocene. Hainan Island’s populations form a unique group within Clade A, suggesting that the Qiongzhou Strait served as a dispersal corridor during glaciation. Rising sea levels likely separated the Hainan population afterward. Ecological niche modeling showed that both populations have been viable since the last interglacial period, with demographic analyses indicating possible expansions during the Middle and Late Pleistocene, driven by favorable climates. This study highlights the significant effects of Pleistocene sea-level and climatic changes on the distribution and evolution of S. bifidus in China.
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- 2024
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10. Chromosome-level genome assembly of bean flower thrips Megalurothrips usitatus (Thysanoptera: Thripidae)
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Ling Ma, Qiaoqiao Liu, Shujun Wei, Shanlin Liu, Li Tian, Fan Song, Yuange Duan, Wanzhi Cai, and Hu Li
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Science - Abstract
Abstract Bean flower thrips Megalurothrips usitatus is a staple pest of cowpea and other legumes and causes dramatic economic losses. Its small size allows for easy concealment, and large reproductive capacity easily leads to infestations. Despite the importance of a genome in developing novel management strategies, genetic studies on M. usitatus remain limited. Thus, we generated a chromosome-level M. usitatus genome using a combination of PacBio long read and Hi-C technologies. The assembled genome was 238.14 Mb with a scaffold N50 of 13.85 Mb. The final genome was anchored into 16 pseudo-chromosomes containing 14,000 genes, of which 91.74% were functionally annotated. Comparative genomic analyses revealed that expanded gene families were enriched in fatty acid metabolism and detoxification metabolism (ABC transporters), and contracted gene families were strongly associated with chitin-based cuticle development and sensory perception of taste. In conclusion, this high-quality genome provides an invaluable resource for us to understand the thrips’ ecology and genetics, contributing to pest management.
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- 2023
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11. Climatic oscillation promoted diversification of spinous assassin bugs during Pleistocene glaciation
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Zhenyong Du, Qian Zhao, Xuan Wang, Teiji Sota, Li Tian, Fan Song, Wanzhi Cai, Ping Zhao, and Hu Li
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allopatric speciation ,climatic oscillation ,diversification ,East Asia ,glacial refugia ,phylogeographic structure ,Evolution ,QH359-425 - Abstract
Abstract Insect speciation is among the most fascinating topics in evolutionary biology; however, its underlying mechanisms remain unclear. Allopatric speciation represents one of the major types of speciation and is believed to have frequently occurred during glaciation periods, when climatic oscillation may have caused suitable habitats to be fragmented repeatedly, creating geographical isolation among populations. However, supporting evidence for allopatric speciation of insects in East Asia during the Pleistocene glaciation remains lacking. We aim to investigate the effect of climatic oscillation during the Pleistocene glaciation on the diversification pattern and evolutionary history of hemipteran insects and to test the hypothesis of Pleistocene species stability using spinous assassin bugs Sclomina (Hemiptera: Reduviidae), a small genus widely distributed in southern China but was later found to have cryptic species diversity. Here, using the whole mitochondrial genome (mitogenome) and nuclear ribosomal RNA genes, we investigated both interspecific and intraspecific diversification patterns of spinous assassin bugs. Approximate Bayesian computation, ecological niche modeling, and demographic history analyses were also applied to understand the diversification process and driven factors. Our data suggest that the five species of Sclomina are highly diverged, despite three of them currently being cryptic. Speciation occurred during the Pleistocene when suitable distribution areas were possibly fragmented. Six phylogeographic groups in the type species S. erinacea were identified, among which two groups underwent expansion during the early Last Glacial Period and after Last Glacier Maximum. Our analyses suggest that this genus may have experienced climate‐driven habitat fragmentation and postglacial expansion in the Pleistocene, promoting allopatric speciation and intraspecific diversification. Our results reveal underestimated species diversity in a small insect group and illustrate a remarkable example of allopatric speciation of insects in East Asia promoted by Pleistocene climatic oscillations. These findings provide important insights into the speciation processes and aid the conservation of insect species diversity.
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- 2023
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12. Review of the Genus Sycanus Amyot & Serville, 1843 (Heteroptera: Reduviidae: Harpactorinae), from China Based on DNA Barcoding and Morphological Evidence
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Ping Zhao, Suyi Chen, Yingqi Liu, Jianyun Wang, Zhuo Chen, Hu Li, and Wanzhi Cai
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China ,Sycanus ,taxonomy ,DNA barcoding ,species delimitation ,phylogeny ,Science - Abstract
Due to the variability of body coloration and morphological similarity among closely related species, unresolved issues and debates still persist in the taxonomic study of the genus Sycanus from China. In this study, we conducted phylogenetic analyses and species delimitation for Sycanus in China based on a COI DNA barcoding dataset comprising 81 samples. The results revealed that all the samples could be classified into 12 species by integrating molecular analyses with morphological comparison. This paper provides a comprehensive systematic review of the Sycanus species found in China, including descriptions of three new species: S. taiwanensis Zhao & Cai sp. nov., S. flavicorius Li & Cai sp. nov., and S. hainanensis Wang & Cai sp. nov. Furthermore, it is proposed that S. croceovittatus Dohrn, 1859, S. leucomesus Walker, 1873, and S. villicus Stål, 1863, are three synonyms of S. bifidus (Fabricius, 1787); S. bicolor Hsiao, 1979, is a synonym of S. versicolor Dohrn, 1859; and S. hsiaoi Maldonado-Capriles, 1990, is a synonym of S. marginellus Putshkov, 1987. Additionally, brief biological information is provided for two species, S. falleni Stål, 1863, and S. croceus Hsiao, 1979.
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- 2024
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13. Identification and Interpretation of A-to-I RNA Editing Events in Insect Transcriptomes
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Ye Xu, Jiyao Liu, Tianyou Zhao, Fan Song, Li Tian, Wanzhi Cai, Hu Li, and Yuange Duan
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A-to-I RNA editing ,identification ,methodology ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Adenosine-to-inosine (A-to-I) RNA editing is the most prevalent RNA modification in the nervous systems of metazoans. To study the biological significance of RNA editing, we first have to accurately identify these editing events from the transcriptome. The genome-wide identification of RNA editing sites remains a challenging task. In this review, we will first introduce the occurrence, regulation, and importance of A-to-I RNA editing and then describe the established bioinformatic procedures and difficulties in the accurate identification of these sit esespecially in small sized non-model insects. In brief, (1) to obtain an accurate profile of RNA editing sites, a transcriptome coupled with the DNA resequencing of a matched sample is favorable; (2) the single-cell sequencing technique is ready to be applied to RNA editing studies, but there are a few limitations to overcome; (3) during mapping and variant calling steps, various issues, like mapping and base quality, soft-clipping, and the positions of mismatches on reads, should be carefully considered; (4) Sanger sequencing of both RNA and the matched DNA is the best verification of RNA editing sites, but other auxiliary evidence, like the nonsynonymous-to-synonymous ratio or the linkage information, is also helpful for judging the reliability of editing sites. We have systematically reviewed the understanding of the biological significance of RNA editing and summarized the methodology for identifying such editing events. We also raised several promising aspects and challenges in this field. With insightful perspectives on both scientific and technical issues, our review will benefit the researchers in the broader RNA editing community.
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- 2023
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14. Full-length transcriptome profiling of Aphidius gifuensis mitochondrial genome with gene rearrangement and control region duplication
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Xinjie Zhao, Shiwen Xu, Jingrui Li, Hailin Yang, Li Tian, Fan Song, Wanzhi Cai, Zhonglong Lin, and Hu Li
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Aphidius gifuensis ,full-length transcriptome ,Mitochondrial gene transcription ,Post-transcriptional cleavage process ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Although mitochondrial gene rearrangement has been observed in many insect lineages, little is known about how it affects mitochondrial gene transcription. To address this question, we first constructed a quantitative transcription map for Aphidius gifuensis, a species of parasitoid wasp known to have a highly rearranged mitochondrial genome (mitogenome) and two potential control regions (CRs). Based on this transcription map, we assessed the models of the mitochondrial transcription and post-transcription cleavage. We found that the J and N strand of this mitogenome differ significantly in transcriptional regulation. On the J strand, we found two transcription initiation sites (TISs), five transcription termination sites (TTSs), and six polycistronic primary transcripts whereas only one TIS, one TTS and one polycistronic primary transcript can be found on the N strand. Most of the non-coding regions of both strands were transcribed into primary transcripts and cleaved after transcription. The proposed mode of transcription of A. gifuensis was similar to that of Drosophila, a model organism with no gene rearrangement. And two rearranged gene clusters (trnI-CR1-trnM-CR2-trnQ and trnW-trnY-trnC) seemed to have little effects on the mode of transcription. In addition, our results revealed the presence of TISs in CR1 and CR2, implying that both CRs maybe required for transcriptional regulation. Analysis of the post-transcriptional cleavage process showed that there were both “forward cleavage” and “reverse cleavage” models in A. gifuensis, and more than one way of cleavages were found in three regions. The incomplete transcripts suggested that the direction of mitochondrial RNA degradation was from 5′ to 3′ end and supported the view of polyadenylation-dependent RNA degradation. Our study provides insights into the transcriptional and post-transcriptional regulation processes of highly rearranged insect mitogenomes.
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- 2023
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15. Conserved A-to-I RNA editing with non-conserved recoding expands the candidates of functional editing sites
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Yuange Duan, Ling Ma, Tianyou Zhao, Jiyao Liu, Caiqing Zheng, Fan Song, Li Tian, Wanzhi Cai, and Hu Li
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A-to-I RNA editing ,conserved ,recoding ,selection ,evolution ,Biology (General) ,QH301-705.5 - Abstract
Adenosine-to-inosine (A-to-I) RNA editing recodes the genome and confers flexibility for the organisms to adapt to the environment. It is believed that RNA recoding sites are well suited for facilitating adaptive evolution by increasing the proteomic diversity in a temporal-spatial manner. The function and essentiality of a few conserved recoding sites are recognized. However, the experimentally discovered functional sites only make up a small corner of the total sites, and there is still the need to expand the repertoire of such functional sites with bioinformatic approaches. In this study, we define a new category of RNA editing sites termed ‘conserved editing with non-conserved recoding’ and systematically identify such sites in Drosophila editomes, figuring out their selection pressure and signals of adaptation at inter-species and intra-species levels. Surprisingly, conserved editing sites with non-conserved recoding are not suppressed and are even slightly overrepresented in Drosophila. DNA mutations leading to such cases are also favoured during evolution, suggesting that the function of those recoding events in different species might be diverged, specialized, and maintained. Finally, structural prediction suggests that such recoding in potassium channel Shab might increase ion permeability and compensate the effect of low temperature. In conclusion, conserved editing with non-conserved recoding might be functional as well. Our study provides novel aspects in considering the adaptive evolution of RNA editing sites and meanwhile expands the candidates of functional recoding sites for future validation.
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- 2024
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16. Comparative genomic analyses reveal evidence for adaptive A-to-I RNA editing in insect Adar gene
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Caiqing Zheng, Ling Ma, Fan Song, Li Tian, Wanzhi Cai, Hu Li, and Yuange Duan
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A-to-I RNA editing ,Adar ,Gly+auto-recoding%22">Ser>Gly auto-recoding ,insect ,Drosophila ,adaptive ,Genetics ,QH426-470 - Abstract
ABSTRACTAlthough A-to-I RNA editing leads to similar effects to A-to-G DNA mutation, nonsynonymous RNA editing (recoding) is believed to confer its adaptiveness by ‘epigenetically’ regulating proteomic diversity in a temporospatial manner, avoiding the pleiotropic effect of genomic mutations. Recent discoveries on the evolutionary trajectory of Ser>Gly auto-editing site in insect Adar gene demonstrated a selective advantage to having an editable codon compared to uneditable ones. However, apart from pure observations, quantitative approaches for justifying the adaptiveness of individual RNA editing sites are still lacking. We performed a comparative genomic analysis on 113 Diptera species, focusing on the Adar Ser>Gly auto-recoding site in Drosophila. We only found one species having a derived Gly at the corresponding site, and this occurrence was significantly lower than genome-wide random expectation. This suggests that the Adar Ser>Gly site is unlikely to be genomically replaced with G during evolution, and thus indicating the advantage of editable status over hardwired genomic alleles. Similar trends were observed for the conserved Ile>Met recoding in gene Syt1. In the light of evolution, we established a comparative genomic approach for quantitatively justifying the adaptiveness of individual editing sites. Priority should be given to such adaptive editing sites in future functional studies.
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- 2024
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17. Narrowing down the candidates of beneficial A-to-I RNA editing by comparing the recoding sites with uneditable counterparts
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Tianyou Zhao, Ling Ma, Shiwen Xu, Wanzhi Cai, Hu Li, and Yuange Duan
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A-to-I RNA editing ,Adar ,auto-recoding ,beneficial ,editable ,metazoan ,Genetics ,QH426-470 ,Cytology ,QH573-671 - Abstract
ABSTRACTAdar-mediated adenosine-to-inosine (A-to-I) RNA editing mainly occurs in nucleus and diversifies the transcriptome in a flexible manner. It has been a challenging task to identify beneficial editing sites from the sea of total editing events. The functional Ser>Gly auto-recoding site in insect Adar gene has uneditable Ser codons in ancestral nodes, indicating the selective advantage to having an editable status. Here, we extended this case study to more metazoan species, and also looked for all Drosophila recoding events with potential uneditable synonymous codons. Interestingly, in D. melanogaster, the abundant nonsynonymous editing is enriched in the codons that have uneditable counterparts, but the Adar Ser>Gly case suggests that the editable orthologous codons in other species are not necessarily edited. The use of editable versus ancestral uneditable codon is a smart way to infer the selective advantage of RNA editing, and priority might be given to these editing sites for functional studies due to the feasibility to construct an uneditable allele. Our study proposes an idea to narrow down the candidates of beneficial recoding sites. Meanwhile, we stress that the matched transcriptomes are needed to verify the conservation of editing events during evolution.
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- 2024
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18. Adaptation of A-to-I RNA editing in bacteria, fungi, and animals
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Yuange Duan, Hu Li, and Wanzhi Cai
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A-to-I RNA editing ,bacteria ,evolution ,adaptation ,proteomic diversification ,Microbiology ,QR1-502 - Published
- 2023
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19. The Many Roles of A-to-I RNA Editing in Animals: Functional or Adaptive?
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Dongwu Zhan, Caiqing Zheng, Wanzhi Cai, Hu Li, and Yuange Duan
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adaptive ,animal ,a-to-i rna editing ,evolution ,functional ,Biochemistry ,QD415-436 ,Biology (General) ,QH301-705.5 - Abstract
Metazoan adenosine-to-inosine (A-to-I) RNA editing is a highly conserved mechanism that diversifies the transcriptome by post-transcriptionally converting adenosine to inosine. Millions of editing sites have been identified in different species and, based on abnormal editing observed in various disorders, it is intuitive to conclude that RNA editing is both functional and adaptive. In this review, we propose the following major points: (1) “Function/functional” only represents a molecular/phenotypic consequence and is not necessarily connected to “adaptation/adaptive”; (2) Adaptive editing should be judged in the light of evolution and emphasize advantages of temporal-spatial flexibility; (3) Adaptive editing could, in theory, be extended from nonsynonymous sites to all potentially functional sites. This review seeks to conceptually bridge the gap between molecular biology and evolutionary biology and provide a more objective understanding on the biological functions and evolutionary significance of RNA editing.
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- 2023
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20. Microstructural Adaptation for Prey Manipulation in the Millipede Assassin Bugs (Hemiptera: Reduviidae: Ectrichodiinae)
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Shiyu Zha, Zhiyao Wang, Xinyu Li, Zhaoyang Chen, Jianyun Wang, Hu Li, Wanzhi Cai, and Li Tian
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Reduviidae ,stenophagy ,antennae ,mouthparts ,sensillum ,microstructures ,Biology (General) ,QH301-705.5 - Abstract
Species in Ectrichodiinae are known for their prey specialization on millipedes. However, knowledge of the morphological adaptations to this unique feeding habit was limited. In the current study, we examined the microstructures of the antennae, mouthparts, and legs of four millipede feeding ectrichodiines, Ectrychotes andreae (Thunberg, 1888), Haematoloecha limbata Miller, 1953, Labidocoris pectoralis (Stål, 1863), and Neozirta eidmanni (Taueber, 1930), and compared them with those of three species of tribelocephalines, a group closely related to Ectrichodiinae. On the antennae, we found four types of antennal sensilla. On the mouthparts, we recognized four types of labial sensilla. Sampled ectrichodiines have distinctly more and denser slightly transverse ridges on the external side of mandibles than tribelocephalines. E. andreae and H. limbata possess numerous small papillae fringed with densely arranged finger-print-like grains on the trochanter and femur; these probably facilitate the immobilization of prey. Overall, our study illustrates, at a microstructural level, the remarkable morphological adaption of prey manipulation in ectrichodiine, and has enhanced our understanding about stenophagy in the family Reduviidae.
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- 2023
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21. A Revision of the Genus Argolis (Hemiptera: Reduviidae: Stenopodainae) from Asia
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Zhuo Chen, Michael D. Webb, and Wanzhi Cai
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Heteroptera ,lectotype ,new combination ,new synonymy ,sexual dimorphism ,Oriental Realm ,Science - Abstract
The assassin bug genus Argolis Stål, 1861 (Hemiptera: Reduviidae: Stenopodainae) has a disjunct distribution in Sub-Saharan Africa and Asia. In the present study, the Asian species of Argolis are revised. Two species are recognized, redescribed, and illustrated, with the following new subjective synonyms and new combination proposed: Argolis Stål, 1861 = Bardesanes Distant, 1909, syn. nov. = Neoklugia Distant, 1919, syn. nov.; A. farinator (Reuter, 1882) = N. typica Distant, 1919, syn. nov. = B. sericenotatus Livingstone & Ravichandran, 1989, syn. nov.; A. signata (Distant, 1909), comb. nov. (transferred from Bardesanes) = Caunus noctulus Hsiao, 1977, syn. nov. Lectotypes for C. farinator, B. signatus, and N. typica are designated. A key to separate the two Asian species of Argolis is provided. The sexual dimorphism, systematic relationships, and distribution of Argolis are discussed. Argolis is newly recorded from Laos, Pakistan, and Vietnam.
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- 2023
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22. Exploring the Mitogenomes of Mantodea: New Insights from Structural Diversity and Higher-Level Phylogenomic Analyses
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Qinpeng Liu, Yingqi Liu, Qiaoqiao Liu, Li Tian, Hu Li, Fan Song, and Wanzhi Cai
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Mantodea ,mitochondrial genome ,gene rearrangements ,phylogenomics ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The recently reorganized classification of Mantodea has made significant progress in resolving past homoplasy problems, although some relationships among higher taxa remain uncertain. In the present study, we utilized newly sequenced mitogenomes and nuclear gene sequences of 23 mantid species, along with published data of 53 mantises, to perform familial-sampling structural comparisons of mantodean mitogenomes and phylogenomic studies. Our rstructural analysis revealed generally conserved mitogenome organizations, with a few cases of tRNA gene rearrangements, including the detection of trnL2 duplication for the first time. In our phylogenetic analysis, we found a high degree of compositional heterogeneity and lineage-specific evolutionary rates among mantodean mitogenomes, which frequently corresponded to several unexpected groupings in the topologies under site-homogeneous models. In contrast, the topologies obtained using the site-heterogeneous mixture model fit the currently accepted phylogeny of Mantodea better. Topology tests and four-cluster likelihood mapping analyses further determined the preferred topologies. Our phylogenetic results confirm the monophyly of superfamilial groups Schizomantodea, Amerimantodea, Heteromantodea, Promantidea, and Mantidea and recover the early-branching relationships as (Mantoidoidea + (Amerimantodea + (Metallyticoidea + Cernomantodea))). Additionally, the results suggest that the long-unresolved phylogenetic position of Majangidae should be placed within Mantidea, close to Mantoidea, rather than within Epaphroditoidea. Our findings contribute to understanding the compositional and structural diversity in mantodean mitogenomes, underscore the importance of evolutionary model selection in phylogenomic studies, and provide new insights into the high-level phylogeny of Mantodea.
- Published
- 2023
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23. Taxonomic notes on the tribe Ectinoderini (Hemiptera: Heteroptera: Reduviidae: Harpactorinae) from the Indochinese Peninsula
- Author
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Zhuo CHEN, Valérie A. LEMAÎTRE, and Wanzhi CAI
- Subjects
hemiptera ,heteroptera ,reduviidae ,harpactorinae ,ectinoderini ,amulius ,ectinoderus ,parapanthous ,taxonomy ,new synonymy ,new combination ,oriental region ,Zoology ,QL1-991 - Abstract
The identities of two species of assassin bugs in the tribe Ectinoderini (Hemiptera: Heteroptera: Reduviidae: Harpactorinae) from the Indochinese Peninsula are reviewed, resulting in the following new synonymy and new combinations: Amulius Stål, 1865 = Parapanthous Distant, 1919, syn. n.; Amulius spinicollis (Distant, 1919), comb. n. (transferred from Parapanthous) and Ectinoderus confragosus (Distant, 1919), comb. n. (transferred from Amulius). Lectotypes of these species are designated. The hemelytral venations of Amulius and Ectinoderus Westwood, 1843 are briefly discussed and their diagnoses accordingly revised. Amulius is newly reported from Vietnam and Ectinoderus is recorded from Cambodia for the first time.
- Published
- 2021
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24. Review of Kissing Bugs (Hemiptera: Reduviidae: Triatominae) from China with Descriptions of Two New Species
- Author
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Yisheng Zhao, Mingyuan Fan, Hu Li, and Wanzhi Cai
- Subjects
Chinese Triatominae ,taxonomy ,genitalia ,key ,Science - Abstract
Triatominae, the only blood-sucking subfamily in Reduviidae, are the vectors of Chagas disease. The majority of them are distributed in the Americas, while the diversity in China has been underestimated, as only two species have been recorded. Here, we describe two new species from China, Triatoma picta Zhao & Cai sp. nov. and T. atrata Zhao & Cai sp. nov., and provide a redescription of T. sinica Hsiao, 1965, along with remarks on T. rubrofasciata (De Geer, 1773). To facilitate the identification, we include photos, especially of genitalia, as well as a distribution map and a key to Chinese triatomines. We calculated the pairwise genetic distances between 23 Triatoma species, which further supported the validity of these new species. We anticipate that our taxonomic review will be useful for identifying Chinese Triatominae.
- Published
- 2023
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25. Cacopsylla fuscicella Sp. Nov. (Hemiptera, Psyllidae), a New Loquat Pest in China
- Author
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Yisheng Zhao, Xinyu Luo, Yingqi Liu, Anxian Shi, Wanzhi Cai, and Fan Song
- Subjects
integrative taxonomy ,jumping plant lice ,Eriobotrya japonica ,new species ,mitochondrial genome ,Science - Abstract
Psylloidea, commonly known as jumping plant-lice, have a phloem-sucking habit and strong specificity to their host plants. Within the Psyllidae family, the genus Cacopsylla Ossiannilsson, 1970 stands out as being the most diverse, with three species feeding on the genus Eriobotrya Lindl. In this study, a new psyllid species, Cacopsylla fuscicella sp. nov., was described from China. It is a pest of Eriobotrya japonica (Thunb.) Lindl. and has been cultivated as a commercial fruit tree for years. Illustrations of habitus, morphological structures, and its damage to loquat were also provided. The complete mitochondrial genome of C. fuscicella sp. nov. was sequenced and annotated. The phylogenetic tree inferred from the maximum likelihood analyses confirmed C. fuscicella sp. nov. as a member of the genus Cacopsylla. Genetic distances were generated to assess comparative genetic distances within Psyllinae.
- Published
- 2023
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26. Scanning Electron Microscopy of Antennae and Mouthparts of Mezira yunnana Hsiao (Hemiptera: Aradidae): Specialized Microstructures Reflecting Adaptation to Mycetophagy
- Author
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Shiyu Zha, Zhiyao Wang, Li Tian, Yisheng Zhao, Xiaoshuan Bai, Zhaoyang Chen, Wanzhi Cai, Xinyu Li, and Hu Li
- Subjects
Aradidae ,antennae ,mouthparts ,sensilla ,microstructures ,feeding habits ,Science - Abstract
Many species of the family Aradidae (also known as flat bugs) feed on fungal mycelia and fruiting bodies. In order to better understand the morphological adaptation to this unique feeding habit, we examined the microstructure of antennae and mouthparts of an aradid species, Mezira yunnana Hsiao, using scanning electron microscope, and documented the fungal feeding process under laboratory conditions. The antennal sensilla include three subtypes of sensilla trichodea, three subtypes of sensilla basiconica, two subtypes of sensilla chaetica, sensilla campaniformia, and sensilla styloconica. The apex of the second segment of flagellum has a large number of various sensilla forming a sensilla cluster. The labial tip is distally constricted, which is rarely observed in other Pentatomomorpha species. The labial sensilla include three subtypes of sensilla trichodea, three subtypes of sensilla basiconica, and a sensilla campaniformia. The tip of the labium has only three pairs of sensilla basiconica III and small comb-shaped cuticular processes. The external surface of the mandibular apex has 8–10 ridge-like central teeth. A series of key morphological structures associated with mycetophagous feeding habit were identified, which will facilitate future studies on adaptive evolution of species in Pentatomomorpha as well as in other heteropteran lineages.
- Published
- 2023
- Full Text
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27. Global phylogeography and invasion history of the spotted lanternfly revealed by mitochondrial phylogenomics
- Author
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Zhenyong Du, Yunfei Wu, Zhuo Chen, Liangming Cao, Tadashi Ishikawa, Satoshi Kamitani, Teiji Sota, Fan Song, Li Tian, Wanzhi Cai, and Hu Li
- Subjects
invasion history ,Lycorma delicatula ,mitochondrial genome ,phylogeography ,Evolution ,QH359-425 - Abstract
Abstract Biological invasion has been a serious global threat due to increasing international trade and population movements. Tracking the source and route of invasive species and evaluating the genetic differences in their native regions have great significance for the effective monitoring and management, and further resolving the invasive mechanism. The spotted lanternfly Lycorma delicatula is native to China and invaded South Korea, Japan, and the United States during the last decade, causing severe damages to the fruits and timber industries. However, its global phylogeographic pattern and invasion history are not clearly understood. We applied high‐throughput sequencing to obtain 392 whole mitochondrial genome sequences from four countries to ascertain the origin, dispersal, and invasion history of the spotted lanternfly. Phylogenomic analyses revealed that the spotted lanternfly originated from southwestern China, diverged into six phylogeographic lineages, and experienced northward expansion across the Yangtze River in the late Pleistocene. South Korea populations were derived from multiple invasions from eastern China and Japan with two different genetic sources of northwestern (Loess Plateau) and eastern (East Plain) lineages in China, whereas the each of Japan and the United States had only one. The United States populations originated through single invasive event from South Korea, which served as a bridgehead of invasion. The environmental conditions, especially the distribution of host Ailanthus trees, and adaptability possibly account for the rapid spread of the spotted lanternfly in the native and introduced regions.
- Published
- 2021
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28. Editorial: Biology, Systematics, Taxonomy, and Evolution of Insect Vectors
- Author
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Kaio Cesar Chaboli Alevi, Cleber Galvão, Mauro Toledo Marrelli, André Barretto Bruno Wilke, Wanzhi Cai, and Jader de Oliveira
- Subjects
biology ,systematics ,taxonomy ,evolution ,insects vectors ,Evolution ,QH359-425 ,Ecology ,QH540-549.5 - Published
- 2022
- Full Text
- View/download PDF
29. Rhodnius micki, a new species of Triatominae (Hemiptera, Reduviidae) from Bolivia
- Author
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Yisheng Zhao, Cleber Galvão, and Wanzhi Cai
- Subjects
Zoology ,QL1-991 - Abstract
Rhodnius Stål, 1859 is the second largest genus of Triatominae after Triatoma Laporte, 1832, and includes several important Chagas vectors. Genitalia in Reduviidae are frequently used for species identification, but the current use of terminology for it is inconsistent in Triatominae. Here, Rhodnius micki sp. nov., is described from Bolivia and considered as belonging to the pictipes group based on its morphological characters and distribution. Detailed documentation of the genitalia of Rhodnius micki sp. nov. is provided with emphasis on its everted phallus, especially the endosomal sclerites, which are potentially useful as species-level diagnostic features in Rhodnius. To further verify the validity of this species, the head shapes and wing venation patterns of five species in Rhodnius are compared with morphometric analysis. After reviewing taxonomic and comparative morphology papers of assassin bugs, a vocabulary with a terminology of morphological characters, especially of external male genitalic characters, is assembled with the preferred terms and the synonyms listed. Establishing a consistent terminological framework will greatly facilitate future research on the homology of these structures across Triatominae and will ultimately contribute to our understanding of the evolution of these groups.
- Published
- 2021
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30. A Taxonomic Revision of the Assassin Bug Genus, Tympanistocoris (Hemiptera: Reduviidae: Reduviinae)
- Author
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Mingyuan Fan, Yingqi Liu, and Wanzhi Cai
- Subjects
Tympanistocoris ,new species ,Papua New Guinea ,taxonomy ,anastomosing veins ,Science - Abstract
The small reduviine genus, Tympanistocoris Miller, is revised. The type species of the genus, T. humilis Miller, is redescribed, and a new species, Tympanistocoris usingeri sp. nov., from Papua New Guinea is described. The illustrations of the antennae, head and pronotum, legs, hemelytra, abdomen, and male genitalia, as well as the habitus of the type specimens are also provided. The new species can be separated from the type species of the genus, T. humilis Miller, in the lateral sides of the pronotum with a distinct carina and the posterior margin of the seventh abdominal segment emarginated. The type specimen of the new species is kept in The Natural History Museum, London. The anastomosing veins of the hemelytra and the systematic position of the genus are briefly discussed.
- Published
- 2023
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31. Full-Length Transcriptome Profiling of Coridius chinensis Mitochondrial Genome Reveals the Transcription of Genes with Ancestral Arrangement in Insects
- Author
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Shiwen Xu, Yuange Duan, Ling Ma, Fan Song, Li Tian, Wanzhi Cai, and Hu Li
- Subjects
Coridius chinensis ,full-length transcriptome ,mitochondrial gene transcription ,RNA processing ,Genetics ,QH426-470 - Abstract
Coridius chinensis (Hemiptera: Dinidoridae) is a medicinal insect. Its mitochondrial gene arrangement is consistent with that of Drosophila melanogaster and Erthesina fullo, the two insects with well-studied mitochondrial transcription. To investigate whether the structural consistency of mitochondrial genes leads to similarities in transcription and post-transcriptional processing, we improved the gene annotation and constructed a quantitative transcription map for the C. chinensis mitochondrial genome (mitogenome) using full-length transcriptome sequencing. The size of this mitogenome was 16,214 bp and the proposed model of mitochondrial transcription was similar to that of Drosophila. Both strands were nearly entirely transcribed except for the antisense genes downstream of trnS2 on N strand. The expression of cytochrome c subunit genes is higher than that of NADH-dehydrogenase subunit genes. The post-transcriptional cleavage process followed the “tRNA punctuation” model, and both the “reverse cleavage” model in Drosophila and “forward cleavage” model in E. fullo were found in C. chinensis. In addition, we found that long non-coding RNAs from the control region contained tandem repeats. Polyadenylation was performed after CCA triplet at the 3′ end of tRNA. The isoform diversity of lrRNA was identified. Our study sheds light on the transcriptional regulation and RNA processing of insect mitogenomes with the putative ancestral gene arrangement.
- Published
- 2023
- Full Text
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32. Revision of the assassin bug genus Neopirates (Heteroptera: Reduviidae: Peiratinae), with descriptions of two new species from Namibia
- Author
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Yingqi LIU, Zhuo CHEN, Michael D. WEBB, and Wanzhi CAI
- Subjects
reduviidae ,peiratinae ,neopirates ,sphodrembas ,taxonomy ,new species ,new synonymy ,afrotropical region ,namibia ,Zoology ,QL1-991 - Abstract
The African assassin bug genus Neopirates Miller, 1952, is revised. The type species, N. nyassae Miller, 1952, is redescribed and illustrated; two new species from Namibia, N. bicolor Liu & Cai sp. n. and N. xanthothorax Liu & Cai sp. n. are described and a key is provided to separate the three species of this genus. Sphodrembas fumipennis Swanson, 2019, the type species of Sphodrembas Swanson, 2019, is placed as a junior synonym of N. nyassae, resulting in Sphodrembas becoming a junior synonym of Neopirates. Morphological differences between Neopirates and similar genera and the distribution of Neopirates are briefly discussed.
- Published
- 2020
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33. Chenicoris dilatatus, a remarkable new genus and new species of assassin bug (Hemiptera: Heteroptera: Reduviidae: Harpactorinae) from southern China
- Author
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Zhuo CHEN, Jianyun WANG, Hu LI, and Wanzhi CAI
- Subjects
hemiptera ,heteroptera ,reduviidae ,harpactorinae ,chenicoris dilatatus ,new genus ,new species ,taxonomy ,china ,Zoology ,QL1-991 - Abstract
Chenicoris dilatatus gen. n. & sp. n. from southern China is described and placed in the largest assassin bug subfamily Harpactorinae (Hemiptera: Heteroptera: Reduviidae). The new species is similar to members of Isyndus Stål, 1859 in general habitus, but can be distinguished from the latter by the unarmed anterior pronotal lobe, the laterally dilated lobe-like abdominal segment V and several features of its genitalia.
- Published
- 2020
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34. A new species of Hornylia Wygodzinsky (Hemiptera, Heteroptera, Reduviidae, Emesinae) from Thailand
- Author
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Zhuo Chen, Hu Li, and Wanzhi Cai
- Subjects
Zoology ,QL1-991 - Abstract
Hornylia obtusipetala sp. nov. from eastern Thailand is described and illustrated. This new species is the second representative of the genus Hornylia Wygodzinsky, 1966. A key to species of Hornylia is presented. The relationship with allied genera and distribution of Hornylia is briefly discussed. Hornylia is recorded from Thailand for the first time.
- Published
- 2020
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35. Camarochiloides weiweii gen. n. & sp. n., the first representative of Pachynomidae (Hemiptera: Heteroptera) from Borneo
- Author
-
Zhuo CHEN, Yingqi LIU, Hu LI, and Wanzhi CAI
- Subjects
hemiptera ,heteroptera ,pachynomidae ,pachynominae ,camarochiloides weiweii ,new genus ,new species ,oriental region ,borneo ,Zoology ,QL1-991 - Abstract
The family Pachynomidae is recorded from Borneo as well as Southeast Asia for the first time. Camarochiloides gen. n. and its type species C. weiweii sp. n. is described. Dorsal habitus and various morphological characters of the new species are illustrated. Subfamily placement and affinities of the new genus are briefly discussed, a key to the genera of Pachynominae is provided. Body and wing polymorphism and nymphal morphology of the new species are documented.
- Published
- 2019
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36. Population Genetic Structure of the Invasive Spotted Alfalfa Aphid Therioaphis trifolii (Hemiptera: Aphididae) in China Inferred From Complete Mitochondrial Genomes
- Author
-
Xinzhi Liu, Shuhua Wei, Zhenyong Du, Jia He, Xinyue Zhang, Hu Li, Rong Zhang, and Wanzhi Cai
- Subjects
Therioaphis trifolii ,biological invasion ,population genetic structure ,phylogenetics ,mitochondrial genome ,Evolution ,QH359-425 ,Ecology ,QH540-549.5 - Abstract
Biological invasions represent a natural rapid evolutionary process in which invasive species may present a major threat to biodiversity and ecosystem integrity. Analyzing the genetic structure and demographic history of invaded populations is critical for the effective management of invasive species. The spotted alfalfa aphid (SAA) Therioaphis trifolii is indigenous in the Mediterranean region of Europe and Africa and has invaded China, causing severe damages to the alfalfa industry. However, little is known about its genetic structure and invasion history. In this study, we obtained 167 complete mitochondrial genome sequences from 23 SAA populations across China based on high-throughput sequencing and performed population genetic and phylogenomic analyses. High haplotype diversity and low nucleotide diversity were found in SAA populations in China with distinct genetic structures, i.e., all populations diverged into three phylogenetic lineages. Demographic history analyses showed a recent expansion of the SAA population, consistent with the recent invasion history. Our study indicated that SAA may have invaded through multiple introduction events during commercial trades of alfalfa, although this needs further validation by nuclear markers.
- Published
- 2021
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37. Revision of the Assassin Bug Genus Sigicoris stat. nov. Based on Morphological Study and Molecular Phylogeny (Heteroptera: Reduviidae: Peiratinae)
- Author
-
Yingqi Liu, Hu Li, and Wanzhi Cai
- Subjects
Australian region ,lectotype ,New Guinea ,new species ,new synonym ,taxonomy ,Science - Abstract
Peiratinae is a cosmopolitan subfamily within Reduviidae with more than 300 known species in 34 genera. There are also some taxa endemic to islands, but their taxonomic status and biology require further study. After examining type specimens of the peiratine species distributed in New Guinea, we found that some of them share many morphological characters, though they were previously assigned in different genera. The phylogenetic analysis based on cytochrome oxidase I, 16S ribosomal RNA and 18S ribosomal RNA genes involving 38 species in 25 genera also supports the result of the morphological study that these species should be involved in a separate genus. In the present study, the subgenus Ectomocoris (Sigicoris) Miller, 1958 is elevated to genus level, Sigicoris stat. nov. Three new combinations, S. brumalis comb. nov., S. gracilis comb. nov., S. sexguttatus comb. nov. and one new species, S. dominiqueae sp. nov. are described or redescribed. The lectotype of Brachysandalus sexguttatus is designated, and Pirates concinnus syn. nov. is treated as the junior synonym of S. sexguttatus comb. nov. A key is provided to separate the four species of this genus. The systematic relationships, diagnosis, distribution and habitat of Sigicoris stat. nov. are briefly discussed.
- Published
- 2022
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38. The Impact of Environmental Habitats and Diets on the Gut Microbiota Diversity of True Bugs (Hemiptera: Heteroptera)
- Author
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Guannan Li, Jingjing Sun, Yujie Meng, Chengfeng Yang, Zhuo Chen, Yunfei Wu, Li Tian, Fan Song, Wanzhi Cai, Xue Zhang, and Hu Li
- Subjects
heteroptera ,gut microbiota ,16S rRNA ,Reduviidae ,Enterococcus ,diet ,Biology (General) ,QH301-705.5 - Abstract
Insects are generally associated with gut bacterial communities that benefit the hosts with respect to diet digestion, limiting resource supplementation, pathogen defense, and ecological niche expansion. Heteroptera (true bugs) represent one of the largest and most diverse insect lineages and comprise species consuming different diets and inhabiting various ecological niches, even including underwater. However, the bacterial symbiotic associations have been characterized for those basically restricted to herbivorous stink bugs of the infraorder Pentatomomorpha. The gut microbiota associated with the megadiverse heteropteran lineages and the implications of ecological and diet variance remain largely unknown. Here, we conducted a bacterial 16S rRNA amplicon sequencing of the gut microbiota across 30 species of true bugs representative of different ecological niches and diets. It was revealed that Proteobacteria and Firmicute were the predominant bacterial phyla. Environmental habitats and diets synergistically contributed to the diversity of the gut bacterial community of true bugs. True bugs living in aquatic environments harbored multiple bacterial taxa that were not present in their terrestrial counterparts. Carnivorous true bugs possessed distinct gut microbiota compared to phytophagous species. Particularly, assassin bugs of the family Reduviidae possessed a characterized gut microbiota predominantly composed of one Enterococcus with different Proteobacteria, implying a specific association between the gut bacteria and host. Overall, our findings highlight the importance of the comprehensive surveillance of gut microbiota association with true bugs for understanding the molecular mechanisms underpinning insect–bacteria symbiosis.
- Published
- 2022
- Full Text
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39. Positive Correlation of the Gene Rearrangements and Evolutionary Rates in the Mitochondrial Genomes of Thrips (Insecta: Thysanoptera)
- Author
-
Qiaoqiao Liu, Jia He, Fan Song, Li Tian, Wanzhi Cai, and Hu Li
- Subjects
mitochondrial genome ,gene rearrangement ,Thysanoptera ,Science - Abstract
Extensive gene rearrangement is characteristic in the mitogenomes of thrips (Thysanoptera), but the historical process giving rise to the contemporary gene rearrangement pattern remains unclear. To better understand the evolutionary processes of gene rearrangement in the mitogenomes of thrips, we sequenced the mitogenome of the banded thrip species Aeolothrips xinjiangensis. First, we found a novel mitochondrial gene order in this species. This mitogenome is 16,947 bp in length and encodes the typical 37 coding genes (13 protein-coding genes, 22 tRNA genes, and two rRNA genes) of insects. The gene arrangement was dramatically different from the putative ancestral mitogenome, with 26 genes being translocated, eight of which were inverted. Moreover, we found a novel, conserved gene block, trnC-trnY, which has not been previously reported in the mitogenomes of thrips. With this newly assembled mitogenome, we compared mitogenome sequences across Thysanoptera to assess the evolutionary processes giving rise to the current gene rearrangement pattern in thrips. Seven identical gene blocks were shared by two sequenced banded thrip mitogenomes, while the reversal of ND2 combined with TDRL events resulted in the different gene orders of these two species. In phylogenetic analysis, the monophyly of the suborders and families of Thysanoptera was well supported. Across the gene orders of 14 thrips, only two conserved gene blocks, ATP8-ATP6 and ND4-ND4L, could be found. Correlation analysis showed that the degree of gene rearrangement was positively correlated with the non-synonymous substitution rate in thrips. Our study suggests that the mitogenomes of thrips remain stable over long evolutionary timescales after massive rearrangement during early diversification.
- Published
- 2022
- Full Text
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40. Taxonomic review of Xenorhyncocoris Miller (Heteroptera: Reduviidae: Ectrichodiinae), with description of X. attractivus sp. nov. and notes on sexual dimorphism of the genus
- Author
-
Zhuo Chen, Yingqi Liu, and Wanzhi Cai
- Subjects
Hemiptera ,Ectrichodiini ,taxonomy ,new species ,Oriental Region ,Zoology ,QL1-991 ,Botany ,QK1-989 - Abstract
The enigmatic millipede assassin bug genus Xenorhyncocoris Miller, 1938 is revised. Previously known species, X. caraboides Miller, 1938, X. princeps Miller, 1949 and X. schoenitzeri Putshkov & Bérenger, 1999, are diagnosed and photographed. A new species, X. attractivus sp. nov., is described based on male and female specimens from northeastern Borneo. The male of Xenorhyncocoris is reported for the first time, revealing the extreme sexual dimorphism present in the genus. The diagnosis of Xenorhyncocoris is extended in order to make it applicable to the new discovery, and a female-based key to species of the genus is updated. Relationships among Xenorhyncocoris and Vilius Stål, 1863, Neozirta Distant, 1919 and Schottus Distant, 1902 are briefly discussed.
- Published
- 2021
- Full Text
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41. Characterization of the complete mitochondrial genome of Arma custos (Hemiptera: Pentatomidae)
- Author
-
Yunfei Wu, Hailin Yang, Wenbing Zhou, Fan Song, Wanzhi Cai, and Hu Li
- Subjects
mitochondrial genome ,heteroptera ,asopinae ,arma custos ,Genetics ,QH426-470 - Abstract
The Arma custos is an important natural enemy of agricultural and forest pests. The complete mitochondrial genome (mitogenome) of A. custos was determined in the present paper. This mitogenome is 15,629 bp in size and comprises of 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a control region. All protein-coding genes are initiate with ATN, except ND2, COX1, ATP8 and ND1 use TTA or TTG as the start codon, and terminate with TAA with the exception of COX2 and ND5 which use a single T residue as the stop codon. All tRNAs, ranging from 63 to 72 bp, have the cloverleaf structure except tRNASer(AGN). The monophyly of the subfamily Asopinae is highly supported by the phylogenetic tree and A. custos is recovered as sister to the remaining Asopinae species.
- Published
- 2020
- Full Text
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42. Proteotranscriptomic Analysis and Toxicity Assay Suggest the Functional Distinction between Venom Gland Chambers in Twin-Spotted Assassin Bug, Platymeris biguttatus
- Author
-
Fanding Gao, Li Tian, Xinyu Li, Yinqiao Zhang, Tianfang Wang, Ling Ma, Fan Song, Wanzhi Cai, and Hu Li
- Subjects
Platymeris biguttatus ,venom gland ,transcriptome ,proteome ,toxicity assay ,Biology (General) ,QH301-705.5 - Abstract
Assassin bugs use their salivary venoms for various purposes, including defense, prey paralyzation, and extra-oral digestion, but the mechanisms underlying the functional complexity of the venom remain largely unclear. Since venom glands are composed of several chambers, it is suggested that individual chambers may be specialized to produce chemically distinct venoms to exert different functions. The current study assesses this hypothesis by performing toxicity assays and transcriptomic and proteomic analysis on components from three major venom gland chambers including the anterior main gland (AMG), the posterior main gland (PMG), and the accessory gland (AG) of the assassin bug Platymeris biguttatus. Proteotranscriptomic analysis reveals that AMG and PMG extracts are rich in hemolytic proteins and serine proteases, respectively, whereas transferrin and apolipophorin are dominant in the AG. Toxicity assays reveal that secretions from different gland chambers have distinct effects on the prey, with that from AG compromising prey mobility, that from PMG causing prey death and liquifying the corpse, and that from AMG showing no significant physiological effects. Our study reveals a functional cooperation among venom gland chambers of assassin bugs and provides new insights into physiological adaptations to venom-based predation and defense in venomous predatory bugs.
- Published
- 2022
- Full Text
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43. The Complete Mitochondrial Genome of the Chicken Body Louse, Menacanthus cornutus, and Evolutionary Patterns of Extensive Gene Rearrangements in the Mitochondrial Genomes of Amblycera (Psocodea: Phthiraptera)
- Author
-
Siyu Gong, Ye Xu, Shiwen Xu, Yanxin Liang, Li Tian, Wanzhi Cai, Hu Li, and Fan Song
- Subjects
Menacanthus cornutus ,mitochondrial genome ,gene rearrangement ,evolution ,Genetics ,QH426-470 - Abstract
Animal mitochondrial (mt) genomes are typically double-strand circular DNA molecules, but diverse structural variations have been widely found in multiple groups. In parasitic lice (Phthiraptera), the structure of mt genomes varies remarkably across all five suborders. In this study, we reported the complete mt genome of a chicken body louse, Menacanthus cornutus, which has a typical single circular mt chromosome and drastic mt gene rearrangements. This mt genome is 15,693 bp in length, consisting of 13 protein-coding genes, 23 tRNA genes, 2 rRNA genes, and a control region. A comparison with a typical insect mt genome suggested that two highly similar trnM are present in the mt genome of M. cornutus. Moreover, almost every single gene was rearranged, and over half of mt genes were inverted. Phylogenetic analyses inferred from the mt genome sequences supported the monophyly and position of Amblycera. Mapped over the phylogenetic relationships of Amblycera, we identified two inversion events for the conserved gene blocks in Boopidae and Menoponidae. The inverted ND4L-ND4 was likely a synapomorphic rearrangement in Menoponidae. Our study demonstrated the importance of sequencing mt genomes for additional taxa to uncover the mechanism underlying the structural evolution of the mt genome in parasitic lice.
- Published
- 2022
- Full Text
- View/download PDF
44. The Oriental flat bug genus Libiocoris Kormilev, 1957 revisited: re-examination, synonymy, and description of a new genus (Heteroptera, Aradidae)
- Author
-
Xiaoshuan Bai, Ernst Heiss, and Wanzhi Cai
- Subjects
Zoology ,QL1-991 - Abstract
Re-examination of type specimens of Libiocoris Kormilev 1957, L. poecilus from New Guinea and other taxa assigned to this genus, the Chinese Libiocoris heissi Bai, Yang & Cai, 2006 and Libiocoris sinensis Bai, Yang & Cai, 2006 proved to be synonyms, thus L. heissi = L. sinensis syn. n. They are, however, different from Libiocoris Kormilev, 1957 to which they were originally assigned and a new genus Paralibiocoris gen. n. is proposed for them. Therefore Paralibiocoris heissi comb. n. = Libiocoris heissi Bai et al., 2006 = Libiocoris sinensis Bai et al., 2006, syn. n. From Hainan Island, China, the following new species, P. roundangulus sp. n., P. hainanensis sp. n., and P. limuensis sp. n., are described and figured and a key to species is provided.
- Published
- 2018
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45. The Highly Divergent Mitochondrial Genomes Indicate That the Booklouse, Liposcelis bostrychophila (Psocoptera: Liposcelididae) Is a Cryptic Species
- Author
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Shiqian Feng, Qianqian Yang, Hu Li, Fan Song, Václav Stejskal, George P. Opit, Wanzhi Cai, Zhihong Li, and Renfu Shao
- Subjects
mitochondrial genome ,Liposcelis bostrychophila ,intraspecific variation ,cryptic species ,evolution ,Genetics ,QH426-470 - Abstract
The booklouse, Liposcelis bostrychophila is an important storage pest worldwide. The mitochondrial (mt) genome of an asexual strain (Beibei, China) of the L. bostrychophila comprises two chromosomes; each chromosome contains approximate half of the 37 genes typically found in bilateral animals. The mt genomes of two sexual strains of L. bostrychophila, however, comprise five and seven chromosomes, respectively; each chromosome contains one to six genes. To understand mt genome evolution in L. bostrychophila, and whether L. bostrychophila is a cryptic species, we sequenced the mt genomes of six strains of asexual L. bostrychophila collected from different locations in China, Croatia, and the United States. The mt genomes of all six asexual strains of L. bostrychophila have two chromosomes. Phylogenetic analysis of mt genome sequences divided nine strains of L. bostrychophila into four groups. Each group has a distinct mt genome organization and substantial sequence divergence (48.7–87.4%) from other groups. Furthermore, the seven asexual strains of L. bostrychophila, including the published Beibei strain, are more closely related to two other species of booklice, L. paeta and L. sculptilimacula, than to the sexual strains of L. bostrychophila. Our results revealed highly divergent mt genomes in the booklouse, L. bostrychophila, and indicate that L. bostrychophila is a cryptic species.
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- 2018
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46. Ultrastructural Variations of Antennae and Labia Are Associated with Feeding Habit Shifts in Stink Bugs (Heteroptera: Pentatomidae)
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Xinyu Li, Li Tian, Hu Li, and Wanzhi Cai
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Pentatomidae ,mouthpart ,antenna ,morphology ,ultrastructure ,adaptation ,Biology (General) ,QH301-705.5 - Abstract
The family Pentatomidae (stink bugs) is one of the largest groups in Heteroptera, containing many important pests and natural enemies. They exhibit highly diversified feeding habits and related structural modifications, but the key morphological characteristics associated with feeding habit radiation remain unclear. In the current study, we address this question by analyzing morphological variations of feeding related organs. We compare the ultrastructures of antennae and mouthparts across the chosen 17 species in Pentatomidae, representing both plant feeders and predators from four subfamilies. A strong association between ultrastructural adaptation and feeding habit transition has been revealed. The long, sharp, and hook-like mandibular teeth and maxillary barbs are exclusively present in predatory Pentatomidae, suggesting their tight association with the shift of feeding habit from phytophagy to predation. Significant differences between phytophagous and predatory species are also found in antennal and labial sensilla types and arrangements, implying their important function in food selection. Our data identify a series of key morphological structures associated with feeding habit variations among stink bugs, which will facilitate future studies on adaptive evolution of feeding habits, utilization, and population control of economic species in Pentatomidae as well as in other heteropteran lineages.
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- 2021
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47. Half-jumping plant lice – a taxonomic revision of the distinctive psyllid genus Togepsylla Kuwayama with a reassessment of morphology (Hemiptera, Psylloidea)
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Xinyu Luo, Wanzhi Cai, and Gexia Qiao
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Zoology ,QL1-991 - Abstract
Togepsyllinae is a distinctive group within Psylloidea, with its systematic status treated variously by different authors. Of the only two known genera, Togepsylla is better known and distributed in temperate and tropical East Asia. In this study, the taxonomy and morphology of Togepsylla was studied in detail. Keys to adults and fifth instar immatures of the genus are provided. Togepsylla glutinosae sp. n. is described, and T. matsumurana, T. takahashii, and T. tibetana are redescribed. Syncoptozus is compared with Togepsylla for differences in morphology. Modern psyllids have evolved their jumping hind legs via the elongation of the dorsal edge of coxa, the broadening of coxal wall, the thickening of meron, the backward twisting of the plane of trochanter, femur, and tibia, and the enlargement of trochanteral tendon. However, in Togepsylla, this modification has progressed halfway. The metapleuron of Togepsylla is arranged in a different way than other psyllids. The pleural sulcus is short, and the metepisternum and trochantin are not divided. Wax-secreting fields on abdominal sternites, resembling those of whiteflies, are found on all Togepsylla species, and described for the first time. Other distinctive characters of the genus are also revealed, e.g. frons completely fused with gena, a pair of extra sclerites present behind the base of thoracic furca, one-segmented aedeagus, and absence of a flag lobe on valvula dorsalis of ovipositor. Based on various similarities in morphology, Togepsyllinae may have a close relationship with Aphalaridae-Rhinocolinae and is possibly related to Homotomidae, Liviidae-Liviinae and Atmetocranium (Calophyidae). All the distinctive characters of Togepsyllinae suggest that the current placement of the group is doubtful, and the phylogeny of Aphalaridae needs to be resolved.
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- 2017
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48. Comparative Mitogenomics and Phylogenetic Analyses of Pentatomoidea (Hemiptera: Heteroptera)
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Shiwen Xu, Yunfei Wu, Yingqi Liu, Ping Zhao, Zhuo Chen, Fan Song, Hu Li, and Wanzhi Cai
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Pentatomoidea ,mitochondrial genome ,sequence heterogeneity ,phylogeny ,Genetics ,QH426-470 - Abstract
Pentatomoidea is the largest superfamily of Pentatomomorpha; however, the phylogenetic relationships among pentatomoid families have been debated for a long time. In the present study, we gathered the mitogenomes of 55 species from eight common families (Acanthosomatidae, Cydnidae, Dinidoridae, Scutelleridae, Tessaratomidae, Plataspidae, Urostylididae and Pentatomidae), including 20 newly sequenced mitogenomes, and conducted comparative mitogenomic studies with an emphasis on the structures of non-coding regions. Heterogeneity in the base composition, and contrasting evolutionary rates were encountered among the mitogenomes in Pentatomoidea, especially in Urostylididae, which may lead to unstable phylogenetic topologies. When the family Urostylididae is excluded in taxa sampling or the third codon positions of protein coding genes are removed, phylogenetic analyses under site-homogenous models could provide more stable tree topologies. However, the relationships between families remained the same in all PhyloBayes analyses under the site-heterogeneous mixture model CAT + GTR with different datasets and were recovered as (Cydnidae + (((Tessaratomidae + Dinidoridae) + (Plataspidae + Scutelleridae)) + ((Acanthosomatidae + Urostylididae) + Pentatomidae)))). Our study showed that data optimizing strategies after heterogeneity assessments based on denser sampling and the use of site-heterogeneous mixture models are essential for further analysis of the phylogenetic relationships of Pentatomoidea.
- Published
- 2021
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49. Integrative Taxonomy of the Spinous Assassin Bug Genus Sclomina (Heteroptera: Reduviidae: Harpactorinae) Reveals Three Cryptic Species Based on DNA Barcoding and Morphological Evidence
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Ping Zhao, Zhenyong Du, Qian Zhao, Donghai Li, Xiaolan Shao, Hu Li, and Wanzhi Cai
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Sclomina ,DNA barcoding ,species delimitation ,phylogeny ,cryptic species ,biology ,Science - Abstract
Sclomina Stål, 1861 (Heteroptera: Reduviidae: Harpactorinae) is endemic to China and Vietnam, with only two species, Sclomina erinacea Stål, 1861 and Sclomina guangxiensis Ren, 2001, characterized by spinous body and dentate abdominal connexivum. However, due to variable morphological characteristics, Sclomina erinacea, which is widely distributed in South China, is possibly a complex of cryptic species, and Sclomina guangxiensis was suspected to be an extreme group of the S. erinacea cline. In the present study, we conducted species delimitation and phylogenetic analyses based on the mitochondrial cytochrome c oxidase subunit I (COI) gene sequences of 307 Sclomina specimens collected from 30 sampling localities combined with morphological evidence. The result showed that all samples used in this study were identified as five species: Sclomina guangxiensis is a valid species, and Sclomina erinacea actually includes three cryptic species: Sclomina xingrensis P. Zhao and Cai sp. nov., Sclomina pallens P. Zhao and Cai sp. nov., and Sclomina parva P. Zhao and Cai sp. nov. In this paper, the genus Sclomina is systematically revised, and the morphological characteristics of the five species are compared, described, and photographed in detail. We elucidate the evolutionary history of Sclomina based on results of estimated divergence time. The body shape and coloration (green in nymph and brown in adult) of Sclomina match their environment and mimic the Rubus plants on which they live. The symbiotic relationship between Sclomina and spinous Rubus plants is presented and discussed.
- Published
- 2021
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50. Novel insights into mitochondrial gene rearrangement in thrips (Insecta: Thysanoptera) from the grass thrips, Anaphothrips obscurus
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Hangrui Liu, Hu Li, Fan Song, Wenyi Gu, Jinian Feng, Wanzhi Cai, and Renfu Shao
- Subjects
Medicine ,Science - Abstract
Abstract We sequenced the mitochondrial (mt) genome of the grass thrips, Anaphothrips obscurus, which is highly rearranged and differs from the four thrips species reported previously in the arrangement of both tRNA genes and a protein-coding gene, nad3, and in the copy number of the control region (CR). We reconstructed the phylogeny of the thrips with mt genome sequences, and used it as a framework to gain insights into mt genome evolution in thrips. It is evident that A. obscurus is less rearranged in mt genome organization than the other four known thrips. nad3 is in its ancestral location in A. obscurus but was translocated in other four thrips. Also, A. obscurus has one CR, which is ancestral to hexapods whereas other thrips have two or three CRs. All of the five thrips whose mt genomes have been sequenced to date are from the subfamily Thripinae, which represents about a quarter of the species richness in the order Thysanoptera. The high variation in mt genome organization observed in a subfamily challenges our knowledge about animal mt genomes. It remains to be investigated why mt genomes evolved so fast in the subfamily Thripinae and how mt genomes evolved in other lineages of thrips.
- Published
- 2017
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