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Nitrogen dioxide (NO2) column density measurements from satellites have been widely used in constraining emissions of nitrogen oxides (NOx = NO + NO2). However, the utility of these measurements is impacted by reduced observational coverage due to cloud cover and their reduced sensitivity toward the surface. Combining the information from satellites with surface observations of NO2 will provide greater constraints on emission estimates of NOx. We have developed a deep-learning (DL) model to integrate satellite data and in situ observations of surface NO2 to estimate NOx emissions in China. A priori information for the DL model was obtained from satellite-derived emissions from the Tropospheric Chemistry Reanalysis (TCR-2). A two-stage training strategy was used to integrate in situ measurements from the China Ministry of Ecology and Environment (MEE) observation network with the TCR-2 data. The DL model is trained from 2005 to 2018 and evaluated for 2019 and 2020. The DL model estimated a source of 19.4 Tg NO for total Chinese NOx emissions in 2019, which is consistent with the TCR-2 estimate of 18.5 ± 3.9 Tg NO and the 20.9 Tg NO suggested by the Multi-resolution Emission Inventory for China (MEIC). Combining the MEE data with TCR-2, the DL model suggested higher NOx emissions in some of the less-densely populated provinces, such as Shaanxi and Sichuan, where the MEE data indicated higher surface NO2 concentrations than TCR-2. The DL model also suggested a faster recovery of NOx emissions than TCR-2 after the Chinese New Year (CNY) holiday in 2019, with a recovery time scale that is consistent with Baidu “Qianxi” mobility data. In 2020, the DL-based analysis estimated about a 30 % reduction in NOx emissions in eastern China during the COVID-19 lockdown period, relative to pre-lockdown levels. In particular, the maximum emission reductions were 42 % and 30 % for the Jing-Jin-Ji (JJJ) and the Yangtze River Delta (YRD) mega-regions, respectively. Our results illustrate the potential utility of the DL model as a complementary tool for conventional data-assimilation approaches for air quality applications.

The applications of novel deep learning (DL) techniques in atmospheric science are rising quickly. Here we build a hybrid DL model (hyDL-CO), based on convolutional neural networks (CNNs) and long short-term memory (LSTM) neural networks, to provide a comparative analysis between DL and Kalman filter (KF) to predict carbon monoxide (CO) concentrations in China in 2015–2020. We find the performance of DL model is better than KF in the training period (2015–2018): the mean bias and correlation coefficients are 9.6 ppb and 0.98 over eastern China and are −12.5 ppb and 0.96 over grids with independent observations (i.e., grids with CO observations that are not used in DL training and KF assimilation). By contrast, the assimilated CO concentrations by KF exhibit comparable correlation coefficients but larger negative biases. Furthermore, the DL model demonstrates good temporal extensibility in the test period (2019–2020): the mean bias and correlation coefficients are 95.7 ppb and 0.93 over eastern China and 81.0 ppb and 0.91 over grids with independent observations, while CO observations are not fed into the DL model as an input variable. Despite these advantages, we find a weaker prediction capability of the DL model than KF in the test period, and a noticeable underestimation of CO concentrations at extreme pollution events in the DL model. This work demonstrates the advantages and disadvantages of DL models to predict atmospheric compositions with respect to traditional data assimilation, which is helpful for better applications of this novel technique in future studies.

In this study, we present the development of a new coupled weather and carbon monoxide (CO) data assimilation system based on the Environment and Climate Change Canada (ECCC) operational ensemble Kalman filter (EnKF). The estimated meteorological state is augmented to include CO. Variable localization is used to prevent the direct update of meteorology by the observations of the constituents and vice versa. Physical localization is used to damp spurious analysis increments far from a given observation. Perturbed surface flux fields are used to account for the uncertainty in CO due to errors in the surface fluxes. The system is demonstrated for the estimation of three-dimensional CO states using simulated observations from a variety of networks. First, a hypothetically dense, uniformly distributed observation network is used to demonstrate that the system is working. More realistic observation networks, based on surface hourly observations, and space-based observations provide a demonstration of the complementarity of the different networks and further confirm the reasonable behavior of the coupled assimilation system. Having demonstrated the ability to estimate CO distributions, this system will be extended to estimate surface fluxes in the future.

Observations of carbon monoxide (CO) from the Measurements Of Pollution In The Troposphere (MOPITT) instrument aboard the Terra spacecraft were expected to have an accuracy of 10 % prior to the launch in 1999. Here we evaluate MOPITT Version 7 joint (V7J) thermal-infrared and near-infrared (TIR–NIR) retrieval accuracy and precision and suggest ways to further improve the accuracy of the observations. We take five steps involving filtering or bias corrections to reduce scatter and bias in the data relative to other MOPITT soundings and ground-based measurements. (1) We apply a preliminary filtering scheme in which measurements over snow and ice are removed. (2) We find a systematic pairwise bias among the four MOPITT along-track detectors (pixels) on the order of 3–4 ppb with a small temporal trend, which we remove on a global scale using a temporally trended bias correction. (3) Using a small-region approximation (SRA), a new filtering scheme is developed and applied based on additional quality indicators such as the signal-to-noise ratio (SNR). After applying these new filters, the root-mean-squared error computed using the local median from the SRA over 16 years of global observations decreases from 3.84 to 2.55 ppb. (4) We also use the SRA to find variability in MOPITT retrieval anomalies that relates to retrieval parameters. We apply a bias correction to one parameter from this analysis. (5) After applying the previous bias corrections and filtering, we compare the MOPITT results with the GGG2014 ground-based Total Carbon Column Observing Network (TCCON) observations to obtain an overall global bias correction. These comparisons show that MOPITT V7J is biased high by about 6 %–8 %, which is similar to past studies using independent validation datasets on V6J. When using TCCON spectrometric column retrievals without the standard airmass correction or scaling to aircraft (WMO scale), the ground- and satellite-based observations overall agree to better than 0.5 %. GEOS-Chem data assimilations are used to estimate the influence of filtering and scaling to TCCON on global CO and tend to pull concentrations away from the prior fluxes and closer to the truth. We conclude with suggestions for further improving the MOPITT data products.

OBJECTIVES: The purpose of this study was to identify featured miRNAs of hepatocellular carcinoma (HCC) by comparing normal and cancer cell line samples and find potential utility as biomarkers for early diagnosis and treatment of HCC. MATERIALS AND METHODS: We downloaded the gene expression profile GSE41077 from Gene Expression Omnibus database which included 6 HCC cell lines samples and 2 controls. Differentially expressed miRNAs were identified by multtest package in R language after the data normalization. The selected differentially expressed miRNAs were further analyzed using bioinformatics methods. Target genes of these miRNAs were predicted using miRTarBase and miRecords databases. STRING software was used to construct the interaction network of target genes. Finally, we made module analysis by using Cytoscape software and its plugins -- MCODE and BiNGO. RESULTS: A total of 40 differential ly expressed miRNAs were identified and the remarkably down-regulated miRNA was hsa-miR122 which included 29 high confident target genes. The interaction network of target genes was constructed among 629 interaction pairs. Four functional modules in the network were obtained, from which EGLN3, ALDOA, NCAM1 and AACS were the high conf ident target genes, respectively. Genes in the modules most related to biological functions of signal transmission, regulation of macromolecule metabolic process. CONCLUSIONS: Low level of expression of hsa-miR-122 in HCC cell line is consistent with the existed previous studies. It is not only confirm the importance role of such miRNA in HCC cells, but also provide important help in identifying specific biomarker of HCC cells. [ABSTRACT FROM AUTHOR]