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Background Microbial communities of wild animals are being increasingly investigated to provide information about the hosts’ biology and promote conservation. Loggerhead sea turtles (Caretta caretta) are a keystone species in marine ecosystems and are considered vulnerable in the IUCN Red List, which led to growing efforts in sea turtle conservation by rescue centers around the world. Understanding the microbial communities of sea turtles in the wild and how affected they are by captivity, is one of the stepping stones in improving the conservation efforts. Describing oral and cloacal microbiota of wild animals could shed light on the previously unknown aspects of sea turtle holobiont biology, ecology, and contribute to best practices for husbandry conditions. Results We describe the oral and cloacal microbiota of Mediterranean loggerhead sea turtles by 16S rRNA gene sequencing to compare the microbial communities of wild versus turtles in, or after, rehabilitation at the Adriatic Sea rescue centers and clinics. Our results show that the oral microbiota is more sensitive to environmental shifts than the cloacal microbiota, and that it does retain a portion of microbial taxa regardless of the shift from the wild and into rehabilitation. Additionally, Proteobacteria and Bacteroidetes dominated oral and cloacal microbiota, while Kiritimatiellaeota were abundant in cloacal samples. Unclassified reads were abundant in the aforementioned groups, which indicates high incidence of yet undiscovered bacteria of the marine reptile microbial communities. Conclusions We provide the first insights into the oral microbial communities of wild and rehabilitated loggerhead sea turtles, and establish a framework for quick and non-invasive sampling of oral and cloacal microbial communities, useful for the expansion of the sample collection in wild loggerhead sea turtles. Finally, our investigation of effects of captivity on the gut-associated microbial community provides a baseline for studying the impact of husbandry conditions on turtles’ health and survival upon their return to the wild.

Hyalosira gene sequences are divided into two clades within different families. We examined authentic material of Hyalosira (isotype material of H. obtusangula, synonymous with H. delicatula) and voucher specimens of published sequences, and pooled our observations of Hyalosira-like taxa from benthic and epizoic habitats in several parts of the globe. The two molecular clades corresponded to two morphological groups, with Hyalosira obtusangula associated with Grammatophoraceae. We emend the description and provide lectotypification for Hyalosira and propose Placosira to encompass the taxa in the other clade, associated with Rhabdonemataceae. We propose that Hyalosira has uniseriate to triseriate striae, sometimes different on valve face and mantle. Copulae in most species had shallow septa, though in one they were moderately deep. All species had girdle bands bearing two rows of areolae separated by a midrib. We name five new species of Hyalosira. Morphologies of taxa in the Placosira clade were superficially similar to Hyalosira but differed in having areolae with ricae, a single row of areolae on the girdle bands, and tubular rimoportulae on the valve-face-mantle junction. Hyalosira hustedtiana Patrick should revert to its original position in Striatella until the appropriate genus can be determined. We emend Rhabdonematales to encompass Rhabdonemataceae, Grammatophoraceae and Tabellariaceae. (C) 2021 Elsevier GmbH. All rights reserved.

Chrysophyte algae live predominantly in freshwater habitats, therefore marine chrysophyte stomatocysts are less common and poorly documented. Here we report on the occurrence of two unknown chrysophycean stomatocysts in a complex epizoic biofilm formed on a carapace of a loggerhead sea turtle (Caretta caretta) found injured on the southeastern coast of the Adriatic Sea and admitted to the Sea Turtle Rescue Centre in Aquarium Pula, Croatia. Stomatocyst #1 is characterized by a thickened circulus giving the cyst an asymmetrical outlook whereas stomatocyst #2 has a thick, wide, irregularly shaped collar. Detailed morphological investigations based on scanning electron microscopy observations and comparison with known chrysophyte stomatocysts worldwide, showed that both should be described as new to science following the guidelines of the International Statospore Working Group (ISWG).

The current study focuses on four species from the primarily marine diatom genus Craspedostauros that were observed growing attached to numerous sea turtles and sea turtle-associated barnacles from Croatia and South Africa. Three of the examined taxa, C. danayanus sp. nov., C. legouvelloanus sp. nov., and C. macewanii sp. nov., are described based on morphological and, whenever possible, molecular characteristics. The new taxa exhibit characters not previously observed in other members of the genus, such as the presence of more than two rows of cribrate areolae on the girdle bands, shallow perforated septa, and a complete reduction of the stauros. The fourth species, C. alatus, itself recently described from museum sea turtle specimens, is reported for the first time from loggerhead sea turtles rescued in Europe. A 3-gene phylogenetic analysis including DNA sequence data for three sea turtle-associated Craspedostauros species and other marine and epizoic diatom taxa indicated that Craspedostauros is monophyletic and sister to Achnanthes. This study, being based on a large number of samples and animal specimens analyzed and using different preservation and processing methods, provides new insights into the ecology and biogeography of the genus and sheds light on the level of intimacy and permanency in the host-epibiont interaction within the epizoic Craspedostauros species.

During a survey of the diatom flora attached to carapaces of loggerhead sea turtles (Caretta caretta) from the Adriatic Sea, a large population of an unknown marine achnanthoid species was observed that could not be assigned to any of the currently described monoraphid diatom genera. Detailed morphological analysis based on scanning electron microscopy observations and comparison with a large number of monoraphid genera such as Madinithidium, Scalariella, Kolbesia and Karayevia, resulted in the description of the new benthic marine genus Majewskaea gen. nov. with the newly described Majewskaea istriaca sp. nov. as generitype. The new genus is characterized by a sternum valve showing a clear recurving ridge surrounding the entire valve margin, the presence of macroareolae closed internally by perforated hymenes, separated by a longitudinal hyaline area, a well-developed sternum and vestigial raphe slits. The raphe valve has a simple straight raphe with bent terminal fissures, a very fine striation pattern composed of macroareolae cut in two by a longitudinal hyaline zone, and a very shallow mantle. The new genus is illustrated using both LM and SEM observations and compared with other resembling marine and brackish Planothidium monoraphid species.

In recent years, biofilm-forming diatoms have received increased attention as sea turtle epibionts. However, most of the research has focused on carapace-associated taxa and communities, while less is known about diatoms growing on sea turtle skin. The current study investigated diatom diversity on the skin of loggerhead sea turtle heads detached from the carcasses found along the Adriatic coast between 1995 and 2004 and stored frozen for a prolonged period of time. By using both light and scanning electron microscopy we have found diatom frustules in 7 out of 14 analysed sea turtle samples. Altogether, 113 diatom taxa were recorded, with a minimum of seven and a maximum of 35 taxa per sample. Eight taxa, Achnanthes elongata, Berkeleya cf. fennica, Chelonicola sp., Licmophora hyalina, Nagumoea sp., Navicula sp., Nitzschia cf. lanceolata, and Poulinea lepidochelicola exceeded 5% of relative abundance in any one sample. The presumably obligately epizoic diatom taxa, A. elongata, Chelonicola sp., and P. lepidochelicola, dominated in six loggerhead samples, contributing up to 97.1% of the total diatom abundance. These observations suggest that on the sea turtle skin highly specialised taxa gain even greater ecological advantage and dominance over the co-occurring benthic forms than in the carapace biofilms. The suitability of frozen sea turtle skin specimens for diatom analysis and limitations of this approach are discussed.

Epizoic diatoms form an important part of micro-epibiota of marine vertebrates such as whales and sea turtles. The present study explores and compares the diversity and biogeography of diatom communities growing on the skin and shell of loggerhead sea turtles (Caretta caretta) from four different localities: Adriatic Sea (Croatia), Ionian Sea (Greece), South Africa and Florida Bay (USA) using both light and scanning electron microscopy. We observed almost 400 diatom taxa belonging to more than 100 genera. Diatom communities from Greece and Croatia showed the highest similarity and were statistically different from those recorded from South Africa and Florida. Part of this variation could be attributed to differences in sampling techniques; however, we believe that geography had an important role. In general, contrary to several previous observations from sea turtles, the presumably exclusively epizoic diatoms contributed less than common benthic taxa to the total diatom flora, which might have been related to the loggerhead feeding behavior. Moreover, skin samples differed from carapace samples in having a distinct diatom composition with a higher proportion of the putative true epizoonts. Our results indicate that epizoic diatom communities differ according to loggerhead geographical location and substrate (skin vs. carapace). The relative abundances of common benthic diatoms and putative exclusive epizoic taxa may inform about sea turtle habitat use or behavior though detailed comparisons among different host species have yet to be performed.

During a survey of the epizoic diatom flora on carapaces of loggerhead sea turtles (Caretta caretta) from the Adriatic Sea, a relatively small population of an unknown amphoroid species was observed, presenting some morphological similarities with the genera Lunella and Catenula. Due to the small size and the lack of distinct structures visible in LM, the observations of its ultrastructure under very high magnification in the scanning electron microscopy (SEM) proved to be critical in taxon delineation and indicated that it should be separated as a new Catenula species. The new species is characterized by very small, dorsiventral valves, striae composed of 1–3 small, marginally placed areolae, a very simple raphe structure lacking terminal raphe fissures, straight simple central raphe endings, the absence of helictoglossa and a distinct central nodule, the latter often discernible in LM. Typical ghost striae, reported to be one of the main morphological features of the genus Catenula, are very faintly present and only visible in the valve interior. The new species is illustrated using both LM and SEM observations and compared with all other known Catenula and Lunella species.

The diatom genus Proschkinia is a common element of biofilms covering diverse substrata in saline inland or shallow coastal environments. It can be distinguished from other naviculoid taxa by its lanceolate valves with a fistula located within the central area and numerous open girdle bands with a U-shaped cross-section and a single row of perforations on the internal side of the fold. Despite this distinct morphology, frustules of Proschkinia are typically weakly silicified and often overlooked when cleaned diatom material is analysed. The current paper describes six new species of Proschkinia: P. browderiana sp. nov., P. lacrimula sp. nov., P. maluszekiana sp. nov., P. sulcata sp. nov., P. torquata sp. nov. and P. vergostriata sp. nov., found in numerous samples of marine organisms, such as sea turtles (including sea turtle museum specimens), sea turtle-associated barnacles and seagrass from across the three oceans. Some of the newly described taxa were found on multiple individuals belonging to different sea turtle species, whereas others were in samples collected from different continents. Molecular phylogenetic analysis indicated that examined Proschkinia strains formed a monophyletic clade, sister to Fistulifera.

Neodelphineis indica is a pelagic araphid diatom described from the warm waters of the Indian and Pacific Oceans. These lightly silicified diatoms are characterized with non- aligned striae across the sternum, two rimoportulae and a single, small, unoccluded pore at each end of the valve. Here, we provide new and complementary morphological observations on the species, collected from different locations: the Adriatic Sea, where it was recorded for the first time, and the Pacifi c Ocean from the Mexican coast. The basic morphology described in our specimens confirms previous observations, but we also detected morphological variability in shape, valve length and chain formation. The finding of the species in the Adriatic Sea rises questions as to its presence there, as it may be well considered as an "invasive" species, arriving to the area as a consequence of the "tropicalization" of the Mediterranean Sea.

Marine picoplankton, unicellular organisms with cell sizes up to 3 μm in diameter, numerically dominate marine ecosystems, encompassing Archaea, Bacteria, Eukarya (protists and fungi) as well as viruses. Autotrophic and heterotrophic picoplankton abundance and community composition with a focus on picoeukaryotes (PEs) were investigated in the winter of 2016 at three stations along a coast-to-offshore transect in the southern Adriatic Sea. Abundances were estimated by flow cytometry, while community composition by Illumina High-Throughput Sequencing (HTS) of 16S and 18S rRNA genes. The photosynthetic picoplankton diversity was also investigated by High-Performance Liquid Chromatography (HPLC) of liposoluble pigments. Heterotrophic bacteria and cyanobacteria (Prochlorococcus and Synechococcus) accounted for up to 7 × 105; 2.3 × 104 and 2.5 × 104 cells mL−1, respectively, while photosynthetic picoeukaryotes peaked with 3 × 103 cells mL−1. Prokaryotes, as revealed by HTS were dominated by Alphaproteobacteria (mainly SAR11, 44.91% of total 16S sequence reads), followed by Gammaproteobacteria (Oceanospirillales and Pseudomonadales, 14.96%), Bacteroidetes (mainly Flavobacteriales, 13%), Cyanobacteria (Prochlorococcus and Synechococcus, 9.52%), Marinimicrobia (SAR406, 7.97%), Deltaproteobacteria (SAR324, 3.83%), Actinobacteria (2.24%) and Chloroflexi (SAR202, 1.90%). Photosynthetic pigment concentrations were very low (12.12 μgL−1 at the most) and taxonomic pigments could be attributed to Prochlorococcus, Synechococcus, Prymnesiophyceae, Bacillariophyceae, Chrysophyceae, and Prasinophyceae. HTS data revealed that PEs were dominated by heterotrophs, such as Syndiniophyceae, parasitic dinoflagellates (79.67% of total 18S sequence reads), Dinophyceae (8.7%) and the radiolarians Collodaria belonging to Sphaerozoidae (22.1%) and Spumellaria (5.0%). On the other hand, photoautotrophs, including Chlorophyta (Mamiellophyceae, Prasinophyceae, Trebouxiophyceae, and Ulvophyceae), Stramenopiles (Bacillariophyta, Chrysophyceae, Dictyochophyceae, Pelagophyceae), photoautotrophic Cryptophyta and some Haptophyta (Prymnesiophyceae), did not exceed 5% of total sequence reads. This study provides the first snapshot of the PEs diversity in oligotrophic euphotic waters of the southern Adriatic Sea, hence setting the stage for large-scale surveying and characterization of the eukaryotic diversity in the entire basin.

Phytoplankton assemblages and pigment distribution were determined in the transitional Boka Kotorska Bay. Samples were collected four times from three stations in the inner part of the Bay between April 2008 and March 2009. Microscopic analysis revealed that the phytoplankton was composed of marine diatoms, dinoflagellates, cryptophytes, chlorophytes and coccolithophorids. Aside from fucoxanthin as the dominant biomarker pigment, alloxanthin, 19′-hexanoyloxyfucoxanthin, peridinin and chlorophyll b provided indicative contributions. Fucoxanthin and alloxanthin showed significant correlation with the phytoplankton chlorophyll a biomass throughout the investigated period. In November 2008, the diatoms were outcompeted by coccolithophorids, which probably efficiently absorbed nutrients during a period of their reduced supply. Due to the reduced nutrient input, in the summer, the phytoplankton community in the Bay was composed mostly of marine dinoflagellates, cryptophytes, and chlorophytes., Prisutnost zajednica fitoplanktona i rasprostranjenost pigmenata utvrđivani su u tranzicijskim vodama Bokokotorskog zaljeva. Uzorci su prikupljeni četiri puta na tri lokaliteta u unutrašnjosti Zaljeva u periodu između travnja 2008. i ožujka 2009. godine. Mikroskopskom analizom utvrđeno je da fitoplankton čine morske dijatomeje, dinoflagelati, kriptofiti, klorofiti i kokolitoforidi. Pored fukoksantina kao dominantnog biomarkerskog pigmenta, bili su zastupljeni i aloksantin, 19′-heksanoiloksifukoksantin, peridinin i klorofil b‏. Fukoksantin i aloksantin su pokazali značajnu korelaciju sa klorofilom a kao indikatorom biomase fitoplanktona tijekom čitavog perioda ispitivanja. U studenom 2008. godine, dijatomeje su nadjačale kokolitoforide, koji su vjerovatno efikasno apsorbirali nutrijente tijekom perioda u kojem je njihova dostupnost bila smanjena. Kao rezultat smanjenog unosa nutrijenata, u ljetnom periodu, zajednicu fitoplanktona u Bokokotorskom zaljevu sačinjavali su uglavnom morski dinoflagelati, kriptofiti i klorofiti.

The paper reports an unusual response of the microzooplankton community to oceanographic conditions observed during the winter of 2015 in the open southern Adriatic. Record-breaking nauplii abundance of 13,734 ind. m-3 was sampled for the open southern Adriatic by 50-\mum net sampling. This could be explained by (i) warmer-than-usual surface and intermediate ocean temperatures, (ii) higher precipitation that freshened and widened the surface layer, pushing saline Levantine Intermediate Water below a 400-m depth, and (iii) strong wind episodes that transported nutrients from the coastal zone to the open ocean and induced limited vertical mixing. Neritic tintinnids and viable photoautotrophs well below the photic zone support the last possibility. Average seasonal maximum of zooplankton abundance was shifted from spring and early summer to the late winter months. Our results document large and fast variations in production conditions rarely found to occur in oligotrophic waters such as the southern Adriatic Sea.

The morphology of the genus Chaetoceros, one of the most abundant and diverse planktonic diatom groups, was investigated using material collected in the eastern Adriatic Sea from 2006 to 2012. Twenty-seven morphologically distinct species have been identified from both field samples and cultivated strains. Two species, C. bacteriastroides and C. pseudodichaeta, are reported for the first time for the area. Morphometric data, general morphology and ultrastructural characters are presented for each species, based on light and electron microscopy observations, with a special emphasis on species-specific distinctive features. Valve ultrastructure appeared to be characteristic for single species or group of closely related species, especially inside the subgenus Hyalochaete. A collection of appropriate micrographs will facilitate future identification of Chaetoceros species and morphological comparison with material from other geographic areas.

The genus Entomoneis Ehrenberg includes diatoms with structurally complex frustules having a bilobate keel elevated above the valve surface and numerous girdle bands. We describe here a new member of the genus, Entomoneis tenera sp. nov. , a minute species found in the plankton of the south-eastern Adriatic Sea. The description and proposed taxonomic affiliation are based on both morphological observations and molecular analyses obtained from three cultivated strains. The cultures were established from plankton net samples taken during BIOTA (Bio-tracing Adriatic Water Masses) cruise conducted in February–March 2015. In addition to characteristic Entomoneis features such as panduriform cells, often twisted around the apical axis and a raphe with simple endings positioned on the sigmoid keel, morphological characteristics of E. tenera are: (1) very small cells, 16–21 μm long and 5–20 μm wide (2) very lightly silicified, delicate frustules without valve striation discernible in light microscopy, (3) broad lanceolate valves with scalpeliform apices (4) a straight to slightly arcuate junction line. Phylogenetic analyses using SSU, rbc L and psb C supported the position of E . tenera within the Entomoneis genus with a clear separation from the other described species.

Two fairly uncommon species of planktonic diatoms of the genus Chaetoceros, C. bacteriastriodes and C. pseudosymmetrycus, were recorded during the study along the South Adriatic transect Dubrovnik-Bari in 2012 and 2015. Species were recorded by observing water samples under inverted microscope. From a total of 89 examined samples unusual Chaetoceros species were recorded in 5 cases in the South Adriatic open waters (to a depth 0-100 m) during winter period. Their abundance did not exceed 102 cellsL-1. Both species have been described from tropical waters, showing Indo- Pacific distribution, and very rarely recorded in the Mediterranean Sea. Areal expansion and introduction of new phytoplankton species might be related to changes in sea circulation in the South Adriatic or ballast water transport. Recent investigations have shown that entering currents, of either Atlantic/Western Mediterranean or Eastern Mediterranean origin, modify the composition of the plankton community in the South Adriatic and each type of current brings different newcomers.

Diatoms have evolved a variety of colonial life forms in which cells are connected by organic threads, mucilage pads or silicate structures. In this study, we provide the first description of a novel strategy of colony formation among marine planktonic diatoms. Bacteriastrum jadranum forms loose but regular chains with distinct heterovalvate terminal cells. The colonial cells and their siliceous projections, the setae, are not in direct contact ; instead, they are enclosed within the optically transparent organic matrix. This cell jacket structure was detected by staining procedure with Alcian Blue, which showed that the polysaccharides are predominant matrix constituents and revealed that the jacket reaches the span of the setae. The scanning electron microscopy (SEM) observations showed distinguishable fibrillar network firmly associated with cells. Using atomic force microscopy (AFM), we were able to visualise and characterise the cell jacket structure at molecular resolution. At nanoscale resolution, the cell jacket appears as a cross-linked fibrillar network organised into a recognisable structure. The circular patches of self-repeating pattern (hexagonal pores with openings of 8–100 nm) are connected through thicker surrounding fibrils and reinforced by branching fibrils. The pore-forming fibrils within the patches are only 0.6–1.6 nm high, the surrounding fibrils connecting patches are 2.0–2.8 nm high, and the branching fibrils are considerably wider but not higher than 4.0 nm. The discovered polysaccharide fibrillar network is highly organised and delicately structured with a monomolecular fibril height of 0.6 nm. We conclude that the Bacteriastrum polysaccharide jacket represents an essential part of the cell, as the conjunction of the polymer network with the frustule appears to be extremely tight and such specific and unique patterns have never been found in self-assembled polysaccharide gel networks, which are usually encountered in the marine environment.

The Velebit and Pag Channels form a 40 km long and 4-14 km wide system running parallel to the northeastern Adriatic coast. The aim of this study was to investigate phytoplankton abundance, composition and distribution along the system in the autumn period. Sampling was carried out at 8 stations in November 2008. The spatial distribution of physico-chemical parameters indicated the existence of a pronounced horizontal thermohaline and trophic gradient. From the inner part of the Velebit Channel, which is an extension of the karstic Zrmanja River estuary, to the outer end of the Pag Channel, which communicates with the open sea, the temperature and salinity ranged from 11.0 to 16.0 °C and from 23.4 to 38.2, respectively. Nutrient concentrations ranged from 0.001 to 0.1 µmol L-1 for orthophosphates, from 0.85 to 7.0 µmol L-1 for total inorganic nitrogen and from 0.3 to 15.4 µmol L-1 for silicates. Total abundance of phytoplankton decreased from 5.5 x 105 cells L-1 to 8.5 x 104 cells L-1 along the trophic gradient. Diatoms dominated the phytoplankton with maximum abundances from 7.3 x 104 cells L-1 (85% of total phytoplankton) at the most oligotrophic stations up to 9.6 x 105 cells L-1 (96% of total phytoplankton) at the nutrient enriched stations. Statistical analysis on the basis of environmental and biological parameters clustered the stations in three main groups. The first group represented the southern Velebit Channel with higher nutrient levels and phytoplankton dominated by Thalassionema nitzschioides. The second group included stations from the middle Velebit Channel with significantly lower levels of nutrients, and phytoplankton mostly dominated by Bacteriastrum sp. with a contribution by various diatom species. The third group represented the stations from the Pag Channel, and associated with the exclusive domination of Bacteriastrum sp. and a greater contribution of coccolithophorids. This paper also gives the first checklist of species present in the extremely oligotrophic area of the Velebit and Pag Channels. 148 taxa were identified: 91 diatoms, 47 dinoflagellates and 10 other flagellate morphotypes. Detailed electron microscopy analysis revealed three potentially toxic diatoms of Pseudo-nitzschia genus: P. calliantha, P. pseudodelicatissima and P. manii. The results of this work represent a valuable contribution to the knowledge of phytoplankton species composition and distribution relative to prevailing physico-chemical conditions in this poorly investigated transition zone., Velebitski i Paški kanal čine 40 km dug i 4-14 km širok sustav koji se proteže usporedno sa sjeveroistočnom obalom Jadranskog mora. Cilj ovog istraživanja je bio istražiti abundanciju, sastav i raspodjelu fitoplanktona duž sustava u jesenskom razdoblju. Uzorkovanje je obavljeno na 8 postaja u studenom 2008. Prostorna raspodjela fizikalno kemijskih parametara upućivala je na postojanje izrazitog horizontalnog termohalinog i trofičkog gradijenta. Od unutrašnjeg dijela Velebitskog kanala, koji je produžetak estuarija krške rijeke Zrmanje do vanjskog dijela Paškog kanala koji se spaja s otvorenim morem, raspon površinske temperature mora iznosio je 11.0 do 16.0 °C, a saliniteta 23.4 do 38.2. Koncentracije nutrijenata kretale su se u rasponu 0.001 - 0.1 μmol L-1 za fosfate, 0.85 - 7.0 μmol L-1 za otopljeni anorganski dušik i 0.3 - 15.4 μmol L-1 za silikate. Dijatomeje su prevladavale u fitoplanktonu s maksimalnom abundancijom u rasponu od 7.3 x 104 stanica L-1 (85% ukupnog fitoplanktona) na najviše oligotrofnim do 9.6 x 105 stanica L-1 (96% ukupnog fitoplanktona) na postajama s većom koncentracijom nutrijenata. Statistička analiza na osnovi bioloških i fizikalno kemijskih parametara podijelila je postaje u tri glavne grupe. Prva grupa predstavljala je južni dio Velebitskog kanala s većom koncentracijom nutrijenata i prevladavajućom vrstom Thalassionema nitzschioides. Druga grupa uključila je postaje iz središnjeg dijela Velebitskog kanala s nižim razinama nutrijenata i s prevladavajućom dijatomejom Bacteriastrum sp.. Treća grupa uključila je postaje u Paškom kanalu u kojima gotovo isključivo prevladava Bacteriastrum mannii sp. i prisutan je veći udio kokolitoforida. Ovaj rad također donosi prvi popis vrsta fitoplanktona prisutnih u ekstremno oligotrofnom području Velebitskog i Paškog kanala. Identificirano je 148 taksona od čega 91 dijatomeja, 47 dinoflagelata i 10 taksona raznih flagelata. Detaljna analiza pomoću elektronskog mikroskopa otkrila je tri vrste iz potencijalno toksičnog dijatomejskog roda Pseudo-nitzschia: P-n. calliantha, P-n. pseudodelicatissima i P-n. mannii. Rezultati ovog rada predstavljaju značajan doprinos poznavanju sastava i raspodjele fitoplanktona u odnosu na prevladavajuće fizikalno kemijske uvjete u ovom slabo istraženom tranzitnom području.

The population dynamics of Pseudo-nitzschia in relation to environmental factors was investigated from March 2002 to July 2008 in Lim Bay, in the north-eastern Adriatic Sea. Domoic acid was monitored in the breeding population of Mytilus galloprovincialis from 2005 to 2008. The principal-component analysis of environmental parameters showed that the system is mostly temperature driven. The phytoplankton community was mainly composed of diatoms. Pseudo-nitzschia was the dominant diatom, present in 60% of samples, with a maximum (1.6 × 10 6 cells L −1 ) contribution up to 97% of the total diatom abundance. Morphological analysis revealed Pseudo-nitzschia manii and potentially toxic Pseudo-nitzschia pseudodelicatissima , Pseudo-nitzschia pungens , Pseudo-nitzschia fraudulenta and Pseudo-nitzschia calliantha as the dominant species in blooms. Pseudo-nitzschia abundance positively correlated to temperature, phosphate and ammonia in accordance with its maximal abundance in the summer/autumn period when fish farms had a maximum impact on the environment. Domoic acid was detected in M . galloprovincialis in concentrations below regulatory limits, ranging from 0.097 to 0.8721 μg g −1 in five cases from April to October 2005 in Lim Bay, but so far it is not clear which of the species was responsible for DA production. This study is also the first record of P. manii , P pungens and P. fraudulenta species in the Adriatic Sea.

The distribution of phytoplankton and its relation to the hydrographic features in the north-eastern Adriatic was investigated in February 2008. The area ofinterest included a thermohaline gradient in the channel situated between the coast and the islands lying parallel to the coast. The gradient is controlledby the influx of oligotrophic karstic riverine water at the south-eastern end, submarine springs in the middle part, and warmer offshore waters at thenorth-western end of the channel. The change of temperature and salinity in the estuarine transition zone was accompanied by abundant diatoms anddinoflagellates below the halocline, with dominant chain-forming diatoms (Chaetoceros, Bacteriastrum) in abundances reaching 5 ×105cells dm-3. The impact of coastal submarine springs detected by infrared remote sensing resulted in the growth of cyanobacteria in thenitrogen-depleted surface waters. The greater contribution of picoplankton, as well as of nanoplanktonic coccolithophorids and cryptophytes, in the outer channelsystem indicated their preference for oligotrophic conditions. Flow cytometric counts of nanophytoplankton were 10-30 times greater than inverted microscopecounts. Cyanobacteria were about five times more abundant than picoeukaryotes. The study demonstrates how different techniques (remote sensing and in situinvestigations) can be useful in understanding the biological and hydrographic set-up in the specific oligotrophic eastern Adriatic coastal environment.