127 results on '"Smith GG"'
Search Results
2. Acute Cocaine-Induced Seizures: Differential Sensitivity of Six Inbred Mouse Strains.
- Author
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Golden, GT, Ferraro, TN, Smith, GG, Snyder, RL, Jones, NL, and Berrettini, WH
- Published
- 2001
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3. Dietary Protein Affects the Growth Response and Tissue Composition of Juvenile Slipper Lobster ( Thenus australiensis ).
- Author
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Williamson A, Carter CG, Codabaccus MB, Fitzgibbon QP, and Smith GG
- Abstract
The effect of different dietary protein levels on apparent feed intake, apparent digestibility, body composition, nutrient retention, and growth efficiency of juvenile slipper lobster ( Thenus australiensis ) were evaluated for 74 days. Three isoenergetic and isolipidic feeds were formulated with crude protein levels of 445, 490, and 551 g kg
-1 DM, designated as P45, P50, and P55, respectively. Lobsters were fed one of these feeds in quadruplicate tanks, with eight lobsters (mean initial wet weight 6.1 ± 0.3 g) per tank in a recirculating seawater system at 27 °C. Increasing dietary protein levels significantly increased apparent feed intake, final dry weight, and daily weight gain. Dietary protein affected whole-body protein, lipid, and energy content. Lobsters fed P55 had significantly higher lipid and energy content than those fed P50 and P45. Protein content was significantly higher in lobsters fed P55 than P50, while P45 was not significantly different from either P50 or P55. Slipper lobsters grew best on a feed containing 550 g kg-1 crude protein (equivalent to 518 g kg-1 digestible protein), providing initial insights into their protein dietary requirement. This study established a foundation for developing standardized feeds, with further research needed to optimize growth performance and nutrient utilization.- Published
- 2024
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4. Synchronising an IMX219 image sensor and AS7265x spectral sensor to make a novel low-cost spectral camera.
- Author
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Sutherland C, Henderson AD, Giosio DR, Trotter AJ, and Smith GG
- Abstract
A low-cost novel spectral camera able to be used for near infrared spectroscopy was made by using a Jetson Nano to synchronize a Sony IMX219 NOIR autofocus image sensor, an AMS AS7265x 18-channel spectral sensor and Osram SFH 4737 broadband infrared LED's. Synchronizing an image sensor and spectral sensor augments a standard RGB image with light spectrum information; capturing the light distribution information normally lost in RGB image capture. Sutherland et al. [1] used this novel spectral camera to examine the dorsal surface of juvenile lobsters as a possible pre-moult detector. Having the image and spectrum in combination allowed the incomplete and unmineralized post-moult dorsal surface to be characterized with 86.7% accuracy for the first time. A proposed application for the spectral camera is to omit the local SFH 4737 light source and use the camera in daylight, effectively making a low-cost substitute hyperspectral snapshot camera. In this configuration the camera may have application for low-cost drone deployment for small scale agriculture., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 The Authors.)
- Published
- 2024
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5. Essentiality of dietary cholesterol and its interactions with phospholipid in juvenile slipper lobster (Thenus australiensis).
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Landman MJ, Codabaccus BM, Nichols DS, Carter CG, Fitzgibbon QP, and Smith GG
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- Animals, Animal Nutritional Physiological Phenomena, Phospholipids metabolism, Cholesterol, Dietary metabolism, Palinuridae metabolism, Animal Feed analysis
- Abstract
This study was conducted to verify the essentiality of dietary cholesterol for early juvenile slipper lobster, Thenus australiensis (initial weight 4.50 ± 0.72 g, mean ± SD, CV = 0.16), and to explore the potential for interactions between dietary cholesterol and phospholipid. An 8-week experiment was conducted using six experimental feeds containing three supplemental cholesterol concentrations (0, 0.2 and 0.4% dry matter) at two supplemental phospholipid concentrations (0% and 1.0% dry matter). Dietary cholesterol concentrations of ≥ 0.2% resulted in up to threefold greater weight gain compared to 0% dietary cholesterol, but without any significant main or interactive dietary phospholipid effect. An interaction was observed for lobster survival with lowest survival (46%) recorded for combined 0% cholesterol and 0% phospholipid compared to every other treatment (71-100%). However, all surviving lobsters at 0% dietary cholesterol, regardless of dietary phospholipid level, were in poor nutritional condition. Apparent feed intake (AFI) was significantly higher at dietary cholesterol ≥ 0.2% but was lower for each corresponding dietary cholesterol level at 1% dietary phospholipid. This implied that the feed conversion ratio was improved with supplemental phospholipid. In conclusion, this study confirms the essential nature of dietary cholesterol and that dietary phospholipid can provide additional benefits., (© 2024. The Author(s).)
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- 2024
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6. CSF1R antagonism results in increased supraspinal infiltration in EAE.
- Author
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Wang M, Caryotakis SE, Smith GG, Nguyen AV, Pleasure DE, and Soulika AM
- Subjects
- Mice, Animals, Organic Chemicals pharmacology, Spinal Cord pathology, Microglia, Receptors, Colony-Stimulating Factor, Receptor Protein-Tyrosine Kinases, Mice, Inbred C57BL, Encephalomyelitis, Autoimmune, Experimental chemically induced, Encephalomyelitis, Autoimmune, Experimental drug therapy
- Abstract
Background: Colony stimulating factor 1 receptor (CSF1R) signaling is crucial for the maintenance and function of various myeloid subsets. CSF1R antagonism was previously shown to mitigate clinical severity in experimental autoimmune encephalomyelitis (EAE). The associated mechanisms are still not well delineated., Methods: To assess the effect of CSF1R signaling, we employed the CSF1R antagonist PLX5622 formulated in chow (PLX5622 diet, PD) and its control chow (control diet, CD). We examined the effect of PD in steady state and EAE by analyzing cells isolated from peripheral immune organs and from the CNS via flow cytometry. We determined CNS infiltration sites and assessed the extent of demyelination using immunohistochemistry of cerebella and spinal cords. Transcripts of genes associated with neuroinflammation were also analyzed in these tissues., Results: In addition to microglial depletion, PD treatment reduced dendritic cells and macrophages in peripheral immune organs, both during steady state and during EAE. Furthermore, CSF1R antagonism modulated numbers and relative frequencies of T effector cells both in the periphery and in the CNS during the early stages of the disease. Classical neurological symptoms were milder in PD compared to CD mice. Interestingly, a subset of PD mice developed atypical EAE symptoms. Unlike previous studies, we observed that the CNS of PD mice was infiltrated by increased numbers of peripheral immune cells compared to that of CD mice. Immunohistochemical analysis showed that CNS infiltrates in PD mice were mainly localized in the cerebellum while in CD mice infiltrates were primarily localized in the spinal cords during the onset of neurological deficits. Accordingly, during the same timepoint, cerebella of PD but not of CD mice had extensive demyelinating lesions, while spinal cords of CD but not of PD mice were heavily demyelinated., Conclusions: Our findings suggest that CSF1R activity modulates the cellular composition of immune cells both in the periphery and within the CNS, and affects lesion localization during the early EAE stages., (© 2024. The Author(s).)
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- 2024
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7. Ontogeny of the Cytochrome P450 Superfamily in the Ornate Spiny Lobster ( Panulirus ornatus ).
- Author
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Lewis CL, Fitzgibbon QP, Smith GG, Elizur A, and Ventura T
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- Animals, Cytochrome P-450 Enzyme System genetics, Molting, Metamorphosis, Biological genetics, Databases, Factual, Palinuridae genetics
- Abstract
Cytochrome P450s (CYP450s) are a versatile superfamily of enzymes known to undergo rapid evolution. They have important roles across growth and development pathways in crustaceans, although it is difficult to characterise orthologs between species due to their sequence diversity. Conserved CYP450s enzymes in crustaceans are those associated with ecdysteroidogenesis: synthesising and breaking down the active moult hormone, 20-hydroxyecdysone. The complex life cycle of the ornate spiny lobster, Panulirus ornatus , relies on moulting in order to grow and develop. Many of these diverse life stages have been analysed to establish a comprehensive transcriptomic database for this species. The transcripts putatively encoding for CYP450s were mapped using transcriptomic analysis and identified across growth and development stages. With the aid of phylogeny, 28 transcripts of 42 putative P. ornatus CYP450s were annotated, including the well conserved Halloween genes, which are involved in ecdysteroidogenesis. Expression patterns across the life stages determined that only a subset of the CYP450s can be detected in each life stage or tissue. Four Shed transcripts show overlapping expression between metamorphosis and adult tissues, suggesting pleotropic functions of the multiple Shed orthologs within P. ornatus .
- Published
- 2024
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8. Application of a stoichiometric bioenergetic approach and whole-body protein synthesis to the nutritional assessment of juvenile Thenus australiensis.
- Author
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Williamson A, Carter CG, Basseer Codabaccus M, Fitzgibbon QP, and Smith GG
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- Animals, Nutrition Assessment, Energy Metabolism, Carbon, Body Fluids, Decapoda
- Abstract
The present study successfully combined a stoichiometric bioenergetic approach with an endpoint stochastic model to simultaneously determine specific dynamic action, metabolic substrate use and whole-body protein synthesis in juvenile slipper lobster Thenus australiensis. Juvenile lobsters were fasted for 48 h to investigate routine metabolism before receiving a single meal of formulated feed containing 1%
15 N-labeled Spirulina. Postprandial oxygen consumption rate, dissolved inorganic carbon, and total nitrogen excretion returned to the pre-feeding level within 24 h. The rate of whole-body protein synthesis was 0.76 ± 0.15 mg CP g-1 day-1 , with a significant reduction from 24 to 48 h post-feeding. The postprandial increase in whole-body protein synthesis accounted for 13-19% of total oxygen uptake. Protein was the primary energy substrate for 48 h fasted (45% oxygen consumption) and post-feeding lobster (44%), suggesting that dietary protein was not efficiently used for growth. The secondary energy substrate differed between carbohydrates in 48 h fasted and lipids in post-feeding lobsters. The present study recommends integrating protein synthesis into protein requirement experiments of marine ectotherms to acquire a more comprehensive picture of protein and energy metabolism and nutritional physiology crucial for formulating cost-effective aquafeeds., (© 2023. Springer Nature Limited.)- Published
- 2023
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9. Tropical rock lobster (Panulirus ornatus) uses chemoreception via the antennular lateral flagellum to identify conspecific ecdysis.
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Kelly TR, Fitzgibbon QP, Smith GG, Banks TM, and Ventura T
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- Animals, Astacoidea, Flagella, Molting, Smell, Palinuridae physiology
- Abstract
The tropical rock lobster, Panulirus ornatus, is a commercially important aquaculture species exhibiting complex social interactions in laboratory culture, including cannibalism of moulting conspecifics. Cannibalism of soft-shelled post-moult stage individuals is a major limitation during the juvenile stage of culture. Not limited to P. ornatus, cannibalism is widespread across farmed decapods, limiting stocking densities in crab, freshwater crayfish, and prawn species. To understand the mechanisms driving this behaviour and reduce its prevalence, we have investigated the role of chemoreception via the aesthetasc-bearing region of the lateral antennular flagellum, in the recognition of conspecific moulting cues. Differential expression analysis of several tissues in P. ornatus shows an upregulation of 70 ionotropic receptor isoforms, including co-receptors (IR25a and IR93a) and divergent receptors (IR4, IR7, and IR21a) in the aesthetasc-bearing region of the antennules. Deafferentation of the aesthetascs via deionised water exposure prevents juveniles from responding to conspecific moulting cues in a two-current choice flume, suggesting chemoreception, possibly olfaction, plays a role in identifying moulting juveniles. This is the first step in understanding the mechanisms via which cannibalism is triggered in juvenile P. ornatus culture. Further work in this area will help discover means to limit cannibalism in laboratory and commercial culture., (© 2023. The Author(s).)
- Published
- 2023
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10. Examining the inorganic elemental composition of lobster phyllosoma (Panulirus ornatus) with X-ray fluorescence microscopy.
- Author
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McDougall DR, Deas R, Howard DL, Fitzgibbon QP, Smith GG, Jeffs AG, and McGillivray DJ
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- Animals, X-Rays, Larva, Aquaculture, Microscopy, Fluorescence, Palinuridae
- Abstract
The ornate spiny rock lobster, Panulirus ornatus, is an attractive candidate for aquaculture. The larval stages of spiny lobsters, known as phyllosoma, are complex with many developmental stages. Very little is known about the inorganic element composition of phyllosoma. In this study, a novel method using synchrotron X-ray fluorescence microscopy (XFM) was applied to investigate the distributions of metals potassium (K), calcium (Ca), copper (Cu), zinc (Zn), the metalloid arsenic (As), and nonmetal bromine (Br) within individual phyllosoma at stages 3, 4, and 8 of their development. For the first time, 1 µm resolution synchrotron XFM images of whole phyllosoma as well as closer examinations of their eyes, mouths, setae, and tails were obtained. Elements accumulated in certain locations within phyllosoma, providing insight into their likely biological role for these organisms. This information may be useful for the application of dietary supplementation in the future to closed larval cycle lobster aquaculture operations., (© The Author(s) 2023. Published by Oxford University Press.)
- Published
- 2023
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11. Unravelling the neuropeptidome of the ornate spiny lobster Panulirus ornatus: A focus on peptide hormones and their processing enzymes expressed in the reproductive tissues.
- Author
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Glendinning S, Fitzgibbon QP, Smith GG, and Ventura T
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- Animals, Male, Female, Semen metabolism, Palinuridae metabolism, Peptide Hormones metabolism, Neuropeptides genetics, Neuropeptides metabolism
- Abstract
Neuropeptides are commonly produced in the neural tissues yet can have effects on far-reaching targets, with varied biological responses. We describe here the neuropeptidome of the ornate spiny lobster, Panulirus ornatus, a species of emerging importance to closed-system aquaculture, with a focus on peptide hormones produced by the reproductive tissues. Transcripts for a precursor to one neuropeptide, adipokinetic hormone/corazonin-related peptide (ACP) were identified in high numbers in the sperm duct of adult spiny lobsters suggesting a role for ACP in the reproduction of this species. Neuropeptide production in the sperm duct may be linked with physiological control of spermatophore production in the male, or alternatively may function in signalling to the female. The enzymes which process nascent neuropeptide precursors into their mature, active forms have seldom been studied in decapods, and never before at the multi-tissue level. We have identified transcripts for multiple members of the proprotein convertase subtisilin/kexin family in the ornate spiny lobster, with some enzymes showing specificity to certain tissues. In addition, other enzyme transcripts involved with neuropeptide processing are identified along with their tissue and life stage expression patterns., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2023
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12. Development of a two-current choice flume behavioural bioassay for juvenile Panulirus ornatus response to moulting cues.
- Author
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Kelly TR, Fitzgibbon QP, Giosio DR, Trotter AJ, and Smith GG
- Subjects
- Humans, Animals, Cues, Molting, Palinuridae physiology
- Abstract
Characterising crustacean behaviour in response to conspecific chemical cues contributes to our evolving knowledge of the drivers of their social behaviour. There is particular interest in understanding the chemical and behavioural mechanisms contributing to cannibalism at ecdysis, as this behaviour substantially limits culture productivity of several commercially important crustaceans. Before investigating the role of chemoreception in cannibalism of moulting crustaceans, we must investigate its role in detecting moulting conspecifics. Here we use a two-current choice flume to observe juvenile tropical rock lobster (Panulirus ornatus) behavioural response to conspecific moulting cues and identifying attracted and avoidant behaviours correlating to moult stage and social relationship. Observed cue preferences show inter-moult juveniles are attracted to the moulting cues of lobsters to which they are socially naïve. In contrast, post-moult and inter-moult juveniles avoid the moulting cues of individuals whom they are socially familiar with. Average speed and total distance travelled by lobsters increases in response to conspecific moulting cues. This study demonstrates the suitability of a two-current choice flume for behavioural assays in P. ornatus and characterises clear behavioural patterns in juveniles exposed to conspecific moulting cues. This provides important framework for understanding the role of chemical communication in eliciting cannibalism., (© 2022. The Author(s).)
- Published
- 2022
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13. A Tale of Two Lobsters-Transcriptomic Analysis Reveals a Potential Gap in the RNA Interference Pathway in the Tropical Rock Lobster Panulirus ornatus .
- Author
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Banks TM, Wang T, Fitzgibbon QP, Smith GG, and Ventura T
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- Animals, RNA Interference, Transcriptome, Decapoda, MicroRNAs, Palinuridae genetics
- Abstract
RNA interference (RNAi) has been widely utilised in many invertebrate models since its discovery, and in a majority of instances presents as a highly efficient and potent gene silencing mechanism. This is emphasized in crustaceans with almost all taxa having the capacity to trigger effective silencing, with a notable exception in the spiny lobsters where repeated attempts at dsRNA induced RNAi have demonstrated extremely ineffective gene knockdown. A comparison of the core RNAi machinery in transcriptomic data from spiny lobsters ( Panulirus ornatus ) and the closely related slipper lobsters ( Thenus australiensis, where silencing is highly effective) revealed that both lobsters possess all proteins involved in the small interfering and microRNA pathways, and that there was little difference at both the sequence and domain architecture level. Comparing the expression of these genes however demonstrated that T. australiensis had significantly higher expression in the transcripts encoding proteins which directly interact with dsRNA when compared to P. ornatus , validated via qPCR. These results suggest that low expression of the core RNAi genes may be hindering the silencing response in P. ornatus , and suggest that it may be critical to enhance the expression of these genes to induce efficient silencing in spiny lobsters.
- Published
- 2022
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14. The Effect of Feed Frequency on Growth, Survival and Behaviour of Juvenile Spiny Lobster ( Panulirus ornatus ).
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Kropielnicka-Kruk K, Fitzgibbon QP, Codabaccus BM, Trotter AJ, Giosio DR, Carter CG, and Smith GG
- Abstract
Spiny lobsters have a range of complex chemical communication pathways that contribute to feeding behaviour. Feed intake is modulated by feed availability and feed characteristics, such as attractiveness and palatability, with behavioural factors, such as social competition and circadian rhythm, providing an extra layer of complexity. In this study, we investigated the effect of feed frequency on survival and growth of early-stage (instar 2-6) juvenile Palunirus ornatus . In addition, we investigated the interactive effect of feed frequency and circadian rhythm on lobster feed response. Lobsters were fed a set ration at a frequency of either one, two, four, eight, sixteen or thirty-two times per day over 49 days. The effect of feed frequency on growth and survival was determined. Circadian feeding activity under these feeding treatments was assessed by time-lapse photography. Increased feed frequency from one to sixteen feeds daily improved growth by increasing apparent feed intake (AFI) and feed attraction, as confirmed by the increased presence of lobsters in the feeding area. The rapid leaching of feed attractant, particularly free amino acid, suggests a beneficial effect of multiple feeding frequencies on feed intake and growth. However, more than sixteen feeds per day resulted in decreased feed intake and a subsequent reduction in growth. The decrease in feed intake is thought to be associated with saturation of the culture environment with attractants, resulting in a reduced behavioural response to feed supplies. This may indicate the need for depletion of attractants to retrigger a feeding response. As lobsters were grown communally, faster growth at sixteen rations per day was also coupled with increased cannibalism, likely driven by increased vulnerability with the occurrence of more frequent ecdysis events. Whereas circadian rhythm indicated more activity at night, an interaction between daytime activity and feed frequency was not observed.
- Published
- 2022
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15. Protein sources influence both apparent digestibility and gastrointestinal evacuation rate in juvenile slipper lobster (Thenus australiensis).
- Author
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Wirtz A, Carter CG, Codabaccus MB, Fitzgibbon QP, Townsend AT, and Smith GG
- Subjects
- Animal Nutritional Physiological Phenomena, Animals, Diet, Digestion physiology, Feces, Gastrointestinal Tract, Glycine max metabolism, Animal Feed analysis, Nephropidae
- Abstract
Apparent digestibility and gastrointestinal evacuation rate were measured to assess the potential of five commercially available protein sources for their inclusion in feeds for juvenile slipper lobster, Thenus australiensis. Protein sources tested were fishmeal, krill meal, lupin meal, soybean meal and squid by-product meal. Apparent digestibility of crude protein ranged from 79.6% to 95.3%, with fishmeal protein significantly less digestible than lupin meal, squid by-product meal and soybean meal. Gastrointestinal evacuation rate was estimated from marker replacement, where yttrium oxide replaced ytterbium oxide. Faeces were collected every 3 h for 48 h, and a kinetic model was used to calculate the rate and time for the second marker to replace the first marker. Gastrointestinal evacuation (≥ 95%) was completed between 4 and 6 h with no significant differences among protein sources. Faeces consisted of both markers in equal parts 2.7 to 5.0 h after the feed switch, with lupin meal reaching the midpoint significantly faster than squid by-product meal and reference feed. The present study is the first in crustaceans to examine the relationship between apparent digestibility and gastrointestinal evacuation, showing more digestible protein sources had slower evacuation rates. The combined approach provides deeper insight into crustaceans' digestive physiology and helps understand their ability to digest specific ingredients. Further research is recommended to understand protein requirements in a broader context to verify highly digestible protein sources meet all nutritional requirements., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2022
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16. Predatory bacteria in the haemolymph of the cultured spiny lobster Panulirus ornatus .
- Author
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Ooi MC, Goulden EF, Smith GG, and Bridle AR
- Subjects
- Animals, Bacteria, Hemolymph, Bdellovibrio, Microbiota, Palinuridae microbiology
- Abstract
Bdellovibrio and like organisms (BALOs) are Gram-negative obligate predators of other bacteria in a range of environments. The recent discovery of BALOs in the circulatory system of cultured spiny lobster P. ornatus warrants more investigation. We used a combination of co-culture agar and broth assays and transmission electron microscopy to show a Halobacteriovorax sp. strain Hbv preyed upon the model prey bacterium Vibrio sp. strain Vib. The haemolymph microbiome of juvenile P. ornatus was characterised following injection of phosphate buffered saline (control) or prey and/or predator bacteria for 3 d. The predator Hbv had no effect on survival compared to the control after 3 d. However, when compared to the prey only treatment group, lobsters injected with both prey and predator showed significantly lower abundance of genus Vibrio in the haemolymph bacterial community composition. This study indicates that predatory bacteria are not pathogenic and may assist in controlling microbial population growth in the haemolymph of lobsters.
- Published
- 2021
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17. Corrigendum to "Ultra-trace determination of oxyhalides in ozonated aquacultural marine waters by direct injection ion chromatography coupled with triple-quadrupole mass spectrometry" [Heliyon 7 (4) (April 2021) e06885].
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Sanz Rodriguez E, Lam S, Smith GG, Haddad PR, and Paull B
- Abstract
[This corrects the article DOI: 10.1016/j.heliyon.2021.e06885.]., (© 2021 Published by Elsevier Ltd.)
- Published
- 2021
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18. Effect of dietary protein on energy metabolism including protein synthesis in the spiny lobster Sagmariasus verreauxi.
- Author
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Wang S, Carter CG, Fitzgibbon QP, Codabaccus BM, and Smith GG
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- Age Factors, Ammonia metabolism, Animals, Dietary Carbohydrates metabolism, Nitrogen metabolism, Animal Nutritional Physiological Phenomena, Dietary Proteins metabolism, Energy Metabolism, Palinuridae metabolism, Protein Biosynthesis
- Abstract
This is the first study in an aquatic ectotherm to combine a stoichiometric bioenergetic approach with an endpoint stochastic model to explore dietary macronutrient content. The combination of measuring respiratory gas (O
2 and CO2 ) exchange, nitrogenous (ammonia and urea) excretion, specific dynamic action (SDA), metabolic energy substrate use, and whole-body protein synthesis in spiny lobster, Sagmariasus verreauxi, was examined in relation to dietary protein. Three isoenergetic feeds were formulated with varying crude protein: 40%, 50% and 60%, corresponding to CP40 , CP50 and CP60 treatments, respectively. Total CO2 and ammonia excretion, SDA magnitude and coefficient, and protein synthesis in the CP60 treatment were higher compared to the CP40 treatment. These differences demonstrate dietary protein influences post-prandial energy metabolism. Metabolic use of each major energy substrate varied at different post-prandial times, indicating suitable amounts of high-quality protein with major non-protein energy-yielding nutrients, lipid and carbohydrate, are critical for lobsters. The average contribution of protein oxidation was lowest in the CP50 treatment, suggesting mechanisms underlying the most efficient retention of dietary protein and suitable dietary inclusion. This study advances understanding of how deficient and surplus dietary protein affects energy metabolism and provides approaches for fine-scale feed evaluation to support sustainable aquaculture.- Published
- 2021
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19. Ultra-trace determination of oxyhalides in ozonated aquacultural marine waters by direct injection ion chromatography coupled with triple-quadrupole mass spectrometry.
- Author
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Sanz Rodriguez E, Lam S, Smith GG, Haddad PR, and Paull B
- Abstract
A direct, robust, accurate and highly sensitive method for oxyhalide species in natural waters, including seawater, using suppressed ion chromatography coupled with mass spectrometry (IC-MS) is described. The method utilised a high capacity, high efficiency anion-exchange column (Dionex IonPac AS11-HC, 4 mm, 2 × 250 mm), with the separation achieved using an electrolytically generated potassium hydroxide gradient, delivered at 0.380 mL min
-1 . Applying the method, detection limits for iodate, bromate, and chlorate in seawater after direct sample injection (20 μL injection volume, samples diluted 10-fold), were 11, 30 and 13 ng L-1 (ppt), respectively. Standard addition calibrations to ozonated seawater samples were linear, in all cases R2 > 0.999 ( n = 10), with intra-day repeatability of 3.7, 11.2 and 1.8 % RSD ( n = 10) for a low-level standard mixture (0.30 μg L-1 of iodate, 0.15 μg L-1 of bromate, and 1.50 μg L-1 of chlorate). The method was applied to the analysis of seawater samples taken pre- and post-disinfection points within a recirculating aquacultural system. Iodate, bromate and chlorate were detected as the main oxyanionic disinfection by-products, demonstrating the practical utility of the new method as a valuable tool for monitoring changes to seawater composition following disinfection treatments., Competing Interests: The authors declare no conflict of interest., (© 2021 Published by Elsevier Ltd.)- Published
- 2021
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20. The Chinese mitten crab genome provides insights into adaptive plasticity and developmental regulation.
- Author
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Cui Z, Liu Y, Yuan J, Zhang X, Ventura T, Ma KY, Sun S, Song C, Zhan D, Yang Y, Liu H, Fan G, Cai Q, Du J, Qin J, Shi C, Hao S, Fitzgibbon QP, Smith GG, Xiang J, Chan TY, Hui M, Bao C, Li F, and Chu KH
- Subjects
- Animals, Aquaculture, Chromosome Mapping, Female, Fertility genetics, Gene Expression Profiling, Genes, Homeobox genetics, Genomics, Introduced Species, Life Cycle Stages genetics, Male, Multigene Family genetics, Osmoregulation genetics, Sexual Development genetics, Spatio-Temporal Analysis, Whole Genome Sequencing, Adaptation, Physiological genetics, Brachyura physiology, Gene Expression Regulation, Developmental, Genome genetics
- Abstract
The infraorder Brachyura (true or short-tailed crabs) represents a successful group of marine invertebrates yet with limited genomic resources. Here we report a chromosome-anchored reference genome and transcriptomes of the Chinese mitten crab Eriocheir sinensis, a catadromous crab and invasive species with wide environmental tolerance, strong osmoregulatory capacity and high fertility. We show the expansion of specific gene families in the crab, including F-ATPase, which enhances our knowledge on the adaptive plasticity of this successful invasive species. Our analysis of spatio-temporal transcriptomes and the genome of E. sinensis and other decapods shows that brachyurization development is associated with down-regulation of Hox genes at the megalopa stage when tail shortening occurs. A better understanding of the molecular mechanism regulating sexual development is achieved by integrated analysis of multiple omics. These genomic resources significantly expand the gene repertoire of Brachyura, and provide insights into the biology of this group, and Crustacea in general.
- Published
- 2021
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21. Physiological status and nutritional condition of cultured juvenile Thenus australiensis over the moult cycle.
- Author
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Landman MJ, Fitzgibbon QP, Wirtz A, Codabaccus BM, Ventura T, Smith GG, and Carter CG
- Subjects
- Animals, Culture Techniques, Energy Metabolism, Decapoda growth & development, Decapoda metabolism, Molting, Nutritional Status
- Abstract
The moult cycle is arguably the most critical aspect of crustacean biology and is associated with dramatic changes in behaviour, physiology and condition. Here we describe the first detailed investigation of the combined changes in morphology, physiological status and nutritional condition over the moult cycle of juvenile T. australiensis. Haemolymph refractive index (measured as Brix) was evaluated as a non-destructive method for predicting physiological status and nutritional condition. Post-moult, inter-moult and pre-moult stages were identifiable by microscopic examination of the pleopod distal tips, though differentiation of the pre-moult substages was not possible using this technique. Monitoring of ecdysial suture lines on the exoskeleton gill chambers was found to be highly useful for visually determining progression through the pre-moult stage and predicting the timing of ecdysis. A classical pattern of inter-moult growth was observed where size and wet weight remained relatively uniform over the moult cycle while highly significant changes in whole-body composition were simultaneously observed over time. Growth was most evident by changes in dry weight and dry matter content which more than doubled by the onset of pre-moult. Changes in dry matter content were generally mirrored by Brix and whole-body crude protein, total lipid and gross energy content. Brix strongly correlated with dry matter content and significant correlations were also found for all other primary measures of nutritional condition. Typical moult-related changes were also found for circulating ecdysteroids. This study clearly demonstrates pronounced cyclical changes in physiology and condition of juvenile T. australiensis over a typical moult cycle. The significant correlations between haemolymph and whole-body composition validates Brix as a practical and non-destructive method to objectively assess physiological status, nutritional condition and quality in T. australiensis and further demonstrates its potential for individual crustacean assessment in experimental research and practical commercial applications., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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22. Aquimarina sp. Associated With a Cuticular Disease of Cultured Larval Palinurid and Scyllarid Lobsters.
- Author
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Ooi MC, Goulden EF, Trotter AJ, Smith GG, and Bridle AR
- Abstract
Shell (cuticular) disease manifests in various forms and affects many crustaceans, including lobsters. Outbreaks of white leg disease (WLD) with distinct signs of pereiopod tissue whitening and death have been observed in cultured larvae (phyllosomas) of ornate spiny lobster Panulirus ornatus , eastern rock lobster Sagmariasus verreauxi , and slipper lobster Thenus australiensis . This study aimed to characterise and identify the causative agent of WLD through morphological and molecular (16S rRNA gene and whole genome sequencing) analysis, experimental infection of damaged/undamaged P. ornatus and T. australiensis phyllosomas, and bacterial community analysis (16S rRNA gene amplicon sequencing) of P. ornatus phyllosomas presenting with WLD during an outbreak. Bacterial communities of WLD-affected pereiopods showed low bacterial diversity and dominant abundance of Aquimarina spp. compared to healthy pereiopods, which were more diverse and enriched with Sulfitobacter spp. 16S rRNA gene Sanger sequencing of cultures from disease outbreaks identified the dominant bacterial isolate (TRL1) as a Gram-negative, long non-flagellated rod with 100% sequence identity to Aquimarina hainanensis . Aquimarina sp. TRL1 was demonstrated through comparative genome analysis (99.99% OrthoANIu) as the bacterium reisolated from experimentally infected phyllosomas presenting with typical signs of WLD. Pereiopod damage was a major predisposing factor to WLD. Histopathological examination of WLD-affected pereiopods showed masses of internalised bacteria and loss of structural integrity, suggesting that Aquimarina sp. TRL1 could enter the circulatory system and cause death by septicaemia. Aquimarina sp. TRL1 appears to have important genomic traits (e.g., tissue-degrading enzymes, gliding motility, and aggregate-promoting factors) implicated in the pathogenicity of this bacterium. We have shown that Aquimarina sp. TRL1 is the aetiological agent of WLD in cultured Palinurid and Scyllarid phyllosomas and that damaged pereiopods are a predisposing factor to WLD., (Copyright © 2020 Ooi, Goulden, Trotter, Smith and Bridle.)
- Published
- 2020
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23. Multi-Tissue Transcriptome Analysis Identifies Key Sexual Development-Related Genes of the Ornate Spiny Lobster ( Panulirus ornatus ).
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Ventura T, Chandler JC, Nguyen TV, Hyde CJ, Elizur A, Fitzgibbon QP, and Smith GG
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- Animals, Gene Expression Profiling, Palinuridae growth & development, Arthropod Proteins genetics, Gene Expression Regulation, Developmental, Palinuridae genetics, Sexual Development, Transcriptome
- Abstract
Sexual development involves the successive and overlapping processes of sex determination, sexual differentiation, and ultimately sexual maturation, enabling animals to reproduce. This provides a mechanism for enriched genetic variation which enables populations to withstand ever-changing environments, selecting for adapted individuals and driving speciation. The molecular mechanisms of sexual development display a bewildering diversity, even in closely related taxa. Many sex determination mechanisms across animals include the key family of "doublesex- and male abnormal3-related transcription factors" (Dmrts). In a few exceptional species, a single Dmrt residing on a sex chromosome acts as the master sex regulator. In this study, we provide compelling evidence for this model of sex determination in the ornate spiny lobster Panulius ornatus , concurrent with recent reports in the eastern spiny lobster Sagmariasus verreauxi . Using a multi-tissue transcriptomic database established for P. ornatus , we screened for the key factors associated with sexual development (by homology search and using previous knowledge of these factors from related species), providing an in-depth understanding of sexual development in decapods. Further research has the potential to close significant gaps in our understanding of reproductive development in this ecologically and commercially significant order.
- Published
- 2020
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24. Double-Stranded RNA Binding Proteins in Serum Contribute to Systemic RNAi Across Phyla-Towards Finding the Missing Link in Achelata.
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Banks TM, Wang T, Fitzgibbon QP, Smith GG, and Ventura T
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- Animals, Humans, Arthropod Proteins genetics, Arthropod Proteins metabolism, Palinuridae genetics, Palinuridae metabolism, RNA Interference, RNA, Double-Stranded genetics, RNA, Double-Stranded metabolism, RNA-Binding Proteins genetics, RNA-Binding Proteins metabolism
- Abstract
RNA interference (RNAi) has become a widely utilized method for studying gene function, yet despite this many of the mechanisms surrounding RNAi remain elusive. The core RNAi machinery is relatively well understood, however many of the systemic mechanisms, particularly double-stranded RNA (dsRNA) transport, are not. Here, we demonstrate that dsRNA binding proteins in the serum contribute to systemic RNAi and may be the limiting factor in RNAi capacity for species such as spiny lobsters, where gene silencing is not functional. Incubating sera from a variety of species across phyla with dsRNA led to a gel mobility shift in species in which systemic RNAi has been observed, with this response being absent in species in which systemic RNAi has never been observed. Proteomic analysis suggested lipoproteins may be responsible for this phenomenon and may transport dsRNA to spread the RNAi signal systemically. Following this, we identified the same gel shift in the slipper lobster Thenus australiensis and subsequently silenced the insulin androgenic gland hormone, marking the first time RNAi has been performed in any lobster species. These results pave the way for inducing RNAi in spiny lobsters and for a better understanding of the mechanisms of systemic RNAi in Crustacea , as well as across phyla.
- Published
- 2020
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25. CrustyBase: an interactive online database for crustacean transcriptomes.
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Hyde CJ, Fitzgibbon QP, Elizur A, Smith GG, and Ventura T
- Subjects
- Animals, Crustacea metabolism, Software, Crustacea genetics, Databases, Genetic, Transcriptome
- Abstract
Transcriptome sequencing has opened the field of genomics to a wide variety of researchers, owing to its efficiency, applicability across species and ability to quantify gene expression. The resulting datasets are a rich source of information that can be mined for many years into the future, with each dataset providing a unique angle on a specific context in biology. Maintaining accessibility to this accumulation of data presents quite a challenge for researchers.The primary focus of conventional genomics databases is the storage, navigation and interpretation of sequence data, which is typically classified down to the level of a species or individual. The addition of expression data adds a new dimension to this paradigm - the sampling context. Does gene expression describe different tissues, a temporal distribution or an experimental treatment? These data not only describe an individual, but the biological context surrounding that individual. The structure and utility of a transcriptome database must therefore reflect these attributes. We present an online database which has been designed to maximise the accessibility of crustacean transcriptome data by providing intuitive navigation within and between datasets and instant visualization of gene expression and protein structure.The site is accessible at https://crustybase.org and currently holds 10 datasets from a range of crustacean species. It also allows for upload of novel transcriptome datasets through a simple web interface, allowing the research community to contribute their own data to a pool of shared knowledge.
- Published
- 2020
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26. Neural remodelling in spiny lobster larvae is characterized by broad neuropeptide suppression.
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Hyde CJ, Nguyen T, Fitzgibbon QP, Elizur A, Smith GG, and Ventura T
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- Amino Acid Sequence, Animals, Larva genetics, Larva metabolism, Molting genetics, Neuropeptides genetics, Palinuridae genetics, RNA, Messenger genetics, RNA, Messenger metabolism, Transcriptome genetics, Up-Regulation genetics, Neurons metabolism, Neuropeptides metabolism, Palinuridae metabolism
- Abstract
Neuropeptides are ancient endocrine components which have evolved to regulate many aspects of biology across the animal kingdom including behaviour, development and metabolism. To supplement current knowledge, we have utilized a transcriptome series describing larval development in the ornate spiny lobster, Panulirus ornatus. The biology of this animal has been leveraged to provide insights into the roles of molting, metamorphosis and metabolism across the neuropeptide family. We report an extensive list of neuropeptides across three distinct life phases of the animal. We show distinct groups of neuropeptides with differential expression between larval phases, indicating phase-specific roles for these peptides. For selected neuropeptides, we describe and discuss expression profiles throughout larval development and report predicted peptide cleavage sites and mature peptide sequences. We also report the neuropeptide nesfatin for the first time in a crustacean, and report secondary peptide products with a level of evolutionary conservation similar to the conventional mature peptide nesfatin-1, indicating a conserved role in these secondary products which are widely regarded as biologically inactive. In addition, we report a trend of downregulation in the neuropeptides as the animal undergoes extensive neural remodelling in fulfillment of metamorphosis. We suggest that this downregulation in neuropeptides relates to the brief, yet dramatic changes in morphology experienced by the central nervous system in the process of metamorphosis., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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27. Effect of protein synthesis inhibitor cycloheximide on starvation, fasting and feeding oxygen consumption in juvenile spiny lobster Sagmariasus verreauxi.
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Wang S, Fitzgibbon QP, Carter CG, and Smith GG
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- Animals, Gene Expression Regulation drug effects, Nutritional Status, Oxygen Consumption drug effects, Cycloheximide pharmacology, Food Deprivation, Oxygen Consumption physiology, Palinuridae physiology, Protein Biosynthesis drug effects, Starvation metabolism
- Abstract
Metabolism in aquatic ectotherms evaluated by oxygen consumption rates reflects energetic costs including those associated with protein synthesis. Metabolism is influenced by nutritional status governed by feeding, nutrient intake and quality, and time without food. However, little is understood about contribution of protein synthesis to crustacean energy metabolism. This study is the first using a protein synthesis inhibitor cycloheximide to research contribution of cycloheximide-sensitive protein synthesis to decapod crustacean metabolism. Juvenile Sagmariasus verreauxi were subject to five treatments: 2-day fasted lobsters sham injected with saline; 2-day fasted lobsters injected with cycloheximide; 10-day starved lobsters injected with cycloheximide; post-prandial lobsters fed with squid Nototodarus sloanii with no further treatment; and post-prandial lobsters injected with cycloheximide. Standard and routine metabolic rates in starved lobsters were reduced by 32% and 41%, respectively, compared to fasted lobsters, demonstrating metabolic downregulation with starvation. Oxygen consumption rates of fasted and starved lobsters following cycloheximide injection were reduced by 29% and 13%, respectively, demonstrating protein synthesis represents only a minor component of energy metabolism in unfed lobsters. Oxygen consumption rate of fed lobsters was reduced by 96% following cycloheximide injection, demonstrating protein synthesis in decapods contributes a major proportion of specific dynamic action (SDA). SDA in decapods is predominantly a post-absorptive process likely related to somatic growth. This work extends previously limited knowledge on contribution of protein synthesis to crustacean metabolism, which is crucial to explore the relationship between nutritional status and diet quality and how this will affect growth potential in aquaculture species.
- Published
- 2019
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28. Correction to: Transcriptional profiling of spiny lobster metamorphosis reveals three new additions to the nuclear receptor superfamily.
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Hyde CJ, Fitzgibbon QP, Elizur A, Smith GG, and Ventura T
- Abstract
Following publication of the original article.
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- 2019
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29. Transcriptional profiling of spiny lobster metamorphosis reveals three new additions to the nuclear receptor superfamily.
- Author
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Hyde CJ, Fitzgibbon QP, Elizur A, Smith GG, and Ventura T
- Subjects
- Animals, Molting genetics, Sequence Homology, Nucleic Acid, Species Specificity, Gene Expression Profiling, Metamorphosis, Biological genetics, Palinuridae genetics, Palinuridae growth & development, Receptors, Cytoplasmic and Nuclear genetics
- Abstract
Background: The Crustacea are an evolutionarily diverse taxon which underpins marine food webs and contributes significantly to the global economy. However, our knowledge of crustacean endocrinology and development is far behind that of terrestrial arthropods. Here we present a unique insight into the molecular pathways coordinating crustacean metamorphosis, by reconciling nuclear receptor (NR) gene activity from a 12-stage, 3-replicate transcriptome in the ornate spiny lobster (Panulirus ornatus) during larval development., Results: We annotated 18 distinct nuclear receptor genes, including three novel NRs which are upregulated prior to metamorphosis and have hence been named the "molt-associated receptors" (MARs). We also demonstrate the ecdysone-responsive expression of several known molt-related NRs including ecdysone receptor, fushi-tarazu-F1 and E75. Phylogenetic analysis of the curated NR family confirmed gene annotations and suggested that the MARs are a recent addition to the crustacean superfamily, occurring across the Malacostraca from the Stomatopoda to the Decapoda. The ligand-binding domain of these receptors appears to be less conserved than that of typical group-1 NRs. Expression data from two other crustacean species was utilized to examine MAR expression. The Y-organ of the tropical land crab showed a decline in expression of all MARs from intermolt to post-molt. Tissue distributions showed gonad-enriched expression in the Eastern rock lobster and antennal gland-enriched expression in the tropical land crab, although expression was evident across most tissues., Conclusion: By mining transcriptome data, we have curated an extensive list of NR genes expressed during the metamorphic molts of P. ornatus, including three novel crustacean NRs which appear to play a role in the molting process. Divergence of the E-region of these new receptors indicates that they may have adopted a function that is unconventional for NRs. Based on expression patterns, we can confirm that a number of NRs play a role in the ecdysone cassette which regulates molting in crustaceans. This study describes in detail the molecular events surrounding crustacean molting and metamorphosis by taking advantage of the distinctive life history unique to achelatan crustaceans.
- Published
- 2019
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30. Crustacean larval factor shares structural characteristics with the insect-specific follicle cell protein.
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Ventura T, Nguyen C, Fitzgibbon QP, Abramov T, Smith GG, and Elizur A
- Subjects
- Amino Acid Sequence, Animals, Protein Domains, Sequence Alignment, Species Specificity, Crustacea, Insect Proteins chemistry, Larva
- Abstract
Literature on the cuticle formation in larval stages of the diverse group of decapod crustaceans is lacking, as opposed to a wealth of knowledge in several insect groups. Here we provide the first glimpse of the cuticular organisation in larvae of the eastern spiny lobster Sagmariasus verreauxi. A bioinformatic approach applied to S. verreauxi transcriptome through metamorphosis identified for the first time a small secreted protein with multiple isoforms that is highly expressed in crustacean larvae. This protein, named crustacean larval factor (Clf) shares structural characteristics with insect follicle cell protein 3 (FCP3), an insect-specific, rapidly evolving protein, with spatial-temporal regulated expression that is restricted to follicular cells during the production of the vitellin coat. Furthermore, we identified the FCP3 domain in additional structural proteins in multiple arthropod groups. Recombinant Clf inhibited in vitro calcium carbonate crystalline precipitation, in keeping with the finding that the spiny lobster larval cuticle is mainly composed of amorphous calcium carbonate. In addition, the recombinant Clf was shown to bind chitosan. Taken together, this research identifies two novel structural domains with lineage-specific expansion across arthropods. In crustaceans, Clf is found predominantly in larvae and the spatial-temporal regulated FCP3 factor occurs as a domain identified in multiple structural proteins across arthropods. Given the shared ten cysteines backbone between the Clf and FCP domains, a shared evolution is suggested and should be further explored.
- Published
- 2019
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31. Haemolymph microbiome of the cultured spiny lobster Panulirus ornatus at different temperatures.
- Author
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Ooi MC, Goulden EF, Smith GG, and Bridle AR
- Subjects
- Animals, Bacteria genetics, Bacteria isolation & purification, DNA, Bacterial genetics, Hemolymph microbiology, High-Throughput Nucleotide Sequencing, Microbiota, Palinuridae microbiology, Rhodobacteraceae classification, Rhodobacteraceae genetics, Rhodobacteraceae isolation & purification, Sequence Analysis, DNA, Temperature, Aquaculture methods, Bacteria classification, Palinuridae growth & development
- Abstract
Lobsters have an open circulatory system with haemolymph that contains microorganisms even in the healthy individuals. Understanding the role of these microorganisms becomes increasingly important particularly for the diagnosis of disease as the closed life-cycle aquaculture of the spiny lobster Panulirus ornatus nears commercial reality. This study aimed to characterise haemolymph responses of healthy cultured P. ornatus juveniles at control (28 °C) and elevated (34 °C) temperatures. This was assessed by measuring immune parameters (total granulocyte counts, total haemocyte counts, clotting times), and culture-independent (pyrosequencing of haemolymph DNA) and culture-dependent (isolation using nonselective growth medium) techniques to analyse bacterial communities from lobster haemolymph sampled on days 0, 4 and 6 post-exposure to the temperature regimes. Elevated temperature (34 °C) affected lobster survival, total granulocyte counts, and diversity, load and functional potential of the haemolymph bacterial community. Pyrosequencing analyses showed that the core haemolymph microbiome consisted of phyla Proteobacteria and Bacteriodetes. Overall, culture-independent methods captured a higher bacterial diversity and load when compared to culture-dependent methods, however members of the Rhodobacteraceae were strongly represented in both analyses. This is the first comprehensive study providing comparisons of haemolymph bacterial communities from healthy and thermally stressed cultured juvenile P. ornatus and has the potential to be used in health monitoring programs.
- Published
- 2019
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32. Developmental and gut-related changes to microbiomes of the cultured juvenile spiny lobster Panulirus ornatus.
- Author
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Ooi MC, Goulden EF, Smith GG, Nowak BF, and Bridle AR
- Subjects
- Adolescent, Animals, Aquaculture, Bacteria classification, Bacteria genetics, Digestion, Gastrointestinal Tract microbiology, Humans, RNA, Ribosomal, 16S genetics, Bacteria isolation & purification, Gastrointestinal Microbiome, Palinuridae growth & development, Palinuridae microbiology
- Abstract
With recent technologies making it possible for commercial scale closed life-cycle aquaculture production of spiny lobster (Panulirus ornatus) comes a strong impetus to further understand aspects of lobster health. The gut microbiome plays a crucial role in host health, affecting growth, digestion, immune responses and pathogen resistance. Herein we characterise and compare gut microbiomes across different developmental stages (6-7 days post-emergence [dpe], 52 dpe and 13 months post-emergence [mpe]) and gut regions (foregut, midgut and hindgut) of cultured P. ornatus juveniles. Gut samples were analysed using 16S rRNA next-generation sequencing. Core gut microbiomes of P. ornatus comprised the phyla Tenericutes and Proteobacteria. Within class Gammaproteobacteria, families Pseudoalteromonadaceae and Vibrionaceae were dominant members across the majority of the gut microbiomes. Characterisation of bacterial communities from 13 mpe lobsters indicated that the hindgut microbiome was more diverse and compositionally dissimilar to the foregut and midgut. The bacterial composition of the hindgut was more similar among younger juveniles (6-7 dpe and 52 dpe) compared to 13 mpe lobsters. This is the first study to explore gut microbiomes of spiny lobster juveniles. We demonstrate that the composition of the gut microbiome was shaped by gut region, whereas the structure of the hindgut microbiome was influenced by developmental stage., (© FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2017
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33. CYP450s analysis across spiny lobster metamorphosis identifies a long sought missing link in crustacean development.
- Author
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Ventura T, Bose U, Fitzgibbon QP, Smith GG, Shaw PN, Cummins SF, and Elizur A
- Subjects
- Animals, Arthropod Proteins chemistry, Arthropod Proteins genetics, COS Cells, Chlorocebus aethiops, Computational Biology, Cytochrome P-450 Enzyme System chemistry, Cytochrome P-450 Enzyme System genetics, Databases, Chemical, Databases, Genetic, Databases, Protein, Ecdysterone chemistry, Ecdysterone metabolism, Gene Expression Profiling, Hydroxylation, Molecular Sequence Annotation, Molecular Structure, Molecular Weight, Palinuridae growth & development, Phylogeny, Protein Conformation, Recombinant Proteins metabolism, Arthropod Proteins metabolism, Cytochrome P-450 Enzyme System metabolism, Gene Expression Regulation, Developmental, Metamorphosis, Biological, Models, Molecular, Palinuridae enzymology
- Abstract
Cytochrome P450s (CYP450s) are a rapidly evolving family of enzymes, making it difficult to identify bona fide orthologs with notable lineage-specific exceptions. In ecdysozoans, a small number of the most conserved orthologs include enzymes which metabolize ecdysteroids. Ecdysone pathway components were recently shown in a decapod crustacean but with a notable absence of shade, which is important for converting ecdysone to its active form, 20-hydroxyecdysone (20HE), suggesting that another CYP450 performs a similar function in crustaceans. A CYPome temporal expression analysis throughout metamorphosis performed in this research highlights several un-annotated CYP450s displaying differential expression and provides information into expression patterns of annotated CYP450s. Using the expression patterns in the Eastern spiny lobster Sagmariasus verreauxi, followed by 3D modelling and finally activity assays in vitro, we were able to conclude that a group of CYP450s, conserved across decapod crustaceans, function as the insect shade. To emphasize the fact that these genes share the function with shade but are phylogenetically distinct, we name this enzyme system Shed., (Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2017
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34. Temperature dependent growth, feeding, nutritional condition and aerobic metabolism of juvenile spiny lobster, Sagmariasus verreauxi.
- Author
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Fitzgibbon QP, Simon CJ, Smith GG, Carter CG, and Battaglene SC
- Subjects
- Acclimatization physiology, Aerobiosis physiology, Animals, Body Temperature Regulation, Body Weight, Cell Respiration physiology, Nutritional Status physiology, Temperature, Oxygen metabolism, Oxygen Consumption physiology, Palinuridae growth & development
- Abstract
We examined the effects of temperature on the growth, feeding, nutritional condition and aerobic metabolism of juvenile spiny lobster, Sagmariasus verreauxi, in order to determine if temperature acclimated aerobic scope correlates with optimum for growth and to establish the thermal tolerance window for this emerging aquaculture species. Juvenile lobsters (initial weight=10.95±0.47g) were reared (n=7) at temperatures from 11.0 to 28.5°C for 145days. All lobsters survived from 14.5 to 25.0°C while survival was reduced at 11.0°C (86%) and all lobsters died at 28.5°C. Lobster specific growth rate and specific feed consumption displayed a unimodal response with temperature, peaking at 21.5°C. Lobster standard, routine and maximum metabolic rates, and aerobic scope all increased exponentially up to maximum non-lethal temperature. Optimum temperature for growth did not correspond to that for maximum aerobic scope suggesting that aerobic scope is not an effective predictor of the thermal optimum of spiny lobsters. Plateauing of specific feed consumption beyond 21.5°C suggests that temperature dependent growth of lobsters is limited by capacity to ingest or digest sufficient food to meet increasing maintenance metabolic demands at high temperatures. The nutritional condition of lobsters was not influenced by temperature and feed conversion ratio was improved at lower temperatures. These findings add to a growing body of evidence questioning the generality of aerobic scope to describe the physiological thermal boundaries of aquatic ectotherms and suggest that feed intake plays a crucial role in regulating performance at thermal extremes., (Copyright © 2017 Elsevier Inc. All rights reserved.)
- Published
- 2017
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35. In silico prediction of the G-protein coupled receptors expressed during the metamorphic molt of Sagmariasus verreauxi (Crustacea: Decapoda) by mining transcriptomic data: RNA-seq to repertoire.
- Author
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Buckley SJ, Fitzgibbon QP, Smith GG, and Ventura T
- Subjects
- Animals, Gene Expression Regulation, Palinuridae classification, Phylogeny, Real-Time Polymerase Chain Reaction, Computer Simulation, Gene Expression Profiling, High-Throughput Nucleotide Sequencing methods, Metamorphosis, Biological genetics, Molting genetics, Palinuridae genetics, RNA genetics, Receptors, G-Protein-Coupled genetics
- Abstract
Against a backdrop of food insecurity, the farming of decapod crustaceans is a rapidly expanding and globally significant source of food protein. Sagmariasus verreauxi spiny lobster, the subject of this study, are decapods of underdeveloped aquaculture potential. Crustacean neuropeptide G-protein coupled receptors (GPCRs) mediate endocrine pathways that are integral to animal fecundity, growth and survival. The potential use of novel biotechnologies to enhance GPCR-mediated physiology may assist in improving the health and productivity of farmed decapod populations. This study catalogues the GPCRs expressed in the early developmental stages, as well as adult tissues, with a view to illuminating key neuropeptide receptors. De novo assembled contiguous sequences generated from transcriptomic reads of metamorphic and post metamorphic S. verreauxi were filtered for seven transmembrane domains, and used as a reference for iterative re-mapping. Subsequent putative GPCR open reading frames (ORFs) were BLAST annotated, categorised, and compared to published orthologues based on phylogenetic analysis. A total of 85 GPCRs were digitally predicted, that represented each of the four arthropod subfamilies. They generally displayed low-level and non-differential metamorphic expression with few exceptions that we examined using RT-PCR and qPCR. Two putative CHH-like neuropeptide receptors were annotated. Three dimensional structural modelling suggests that these receptors exhibit a conserved extracellular ligand binding pocket, providing support to the notion that these receptors co-evolved with their ligands across Decapoda. This perhaps narrows the search for means to increase productivity of farmed decapod populations., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
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36. Forecasting the Effect of the Change in Timing of the ABR Diagnostic Radiology Examinations: Results of the ACR Survey of Practice Leaders.
- Author
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Bluth EI, Muroff LR, Cernigliaro JG, Moore AV Jr, Smith GG, Flug J, DeStigter KK, Allen B Jr, Thorwarth WT Jr, and Roberts AC
- Subjects
- Certification trends, Personnel Staffing and Scheduling trends, Radiology trends, Surveys and Questionnaires, United States, Workforce, Certification statistics & numerical data, Forecasting, Leadership, Personnel Staffing and Scheduling statistics & numerical data, Radiology standards
- Abstract
The results of a survey sent to practice leaders in the ACR Practice of Radiology Environment Database show that the majority of responding groups will continue to hire recently trained residents and fellows even though they have been unable to take the final ABR diagnostic radiology certifying examination. However, a significant minority of private practice groups will not hire these individuals. The majority of private practices expect the timing change for the ABR certifying examinations to affect their groups' function. In contrast, the majority of academic medical school practices expect little or no impact. Residents and fellows should not expect work time off or protected time to study for the certifying examination or for their maintenance of certification examinations in the future., (Copyright © 2015 American College of Radiology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
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37. Analysis of candidate genes for morphine preference quantitative trait locus Mop2.
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Doyle GA, Schwebel CL, Ruiz SE, Chou AD, Lai AT, Wang MJ, Smith GG, Buono RJ, Berrettini WH, and Ferraro TN
- Subjects
- Analgesics, Non-Narcotic administration & dosage, Animals, Brain physiology, Choice Behavior drug effects, Choice Behavior physiology, Drinking Behavior drug effects, Drinking Behavior physiology, Gene Expression physiology, Mice, Inbred C57BL, Mice, Inbred DBA, Quinine administration & dosage, RGS Proteins metabolism, Species Specificity, Drug-Seeking Behavior physiology, Morphine administration & dosage, Narcotics administration & dosage, Quantitative Trait Loci
- Abstract
Compared to DBA/2J (D2), C57BL/6J (B6) inbred mice exhibit strong morphine preference when tested using a two-bottle choice drinking paradigm. A morphine preference quantitative trait locus (QTL), Mop2, was originally mapped to proximal chromosome (Chr) 10 using a B6xD2 F2 intercross population, confirmed with reciprocal congenic strains and fine mapped with recombinant congenic strains. These efforts identified a ∼ 10-Million base pair (Mbp) interval, underlying Mop2, containing 35 genes. To further reduce the interval, mice from the D2.B6-Mop2-P1 congenic strain were backcrossed to parental D2 mice and two new recombinant strains of interest were generated: D2.B6-Mop2-P1.pD.dB and D2.B6-Mop2-P1.pD.dD. Results obtained from testing these strains in the two-bottle choice drinking paradigm suggest that the gene(s) responsible for the Mop2 QTL is one or more of 22 remaining within the newly defined interval (∼ 7.6 Mbp) which includes Oprm1 and several other genes related to opioid pharmacology. Real-time qRT-PCR analysis of Oprm1 and opioid-related genes Rgs17, Ppp1r14c, Vip, and Iyd revealed both between-strain and within-strain expression differences in comparisons of saline- and morphine-treated B6 and D2 mice. Analysis of Rgs17 protein levels also revealed both between-strain and within-strain differences in comparisons of saline- and morphine-treated B6 and D2 mice. Results suggest that the Mop2 QTL represents the combined influence of multiple genetic variants on morphine preference in these two strains. Relative contributions of each variant remain to be determined., (Copyright © 2014 IBRO. All rights reserved.)
- Published
- 2014
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38. BMAL1 controls the diurnal rhythm and set point for electrical seizure threshold in mice.
- Author
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Gerstner JR, Smith GG, Lenz O, Perron IJ, Buono RJ, and Ferraro TN
- Abstract
The epilepsies are a heterogeneous group of neurological diseases defined by the occurrence of unprovoked seizures which, in many cases, are correlated with diurnal rhythms. In order to gain insight into the biological mechanisms controlling this phenomenon, we characterized time-of-day effects on electrical seizure threshold in mice. Male C57BL/6J wild-type mice were maintained on a 14/10 h light/dark cycle, from birth until 6 weeks of age for seizure testing. Seizure thresholds were measured using a step-wise paradigm involving a single daily electrical stimulus. Results showed that the current required to elicit both generalized and maximal seizures was significantly higher in mice tested during the dark phase of the diurnal cycle compared to mice tested during the light phase. This rhythm was absent in BMAL1 knockout (KO) mice. BMAL1 KO also exhibited significantly reduced seizure thresholds at all times tested, compared to C57BL/6J mice. Results document a significant influence of time-of-day on electrical seizure threshold in mice and suggest that this effect is under the control of genes that are known to regulate circadian behaviors. Furthermore, low seizure thresholds in BMAL1 KO mice suggest that BMAL1 itself is directly involved in controlling neuronal excitability.
- Published
- 2014
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39. Epilepsy beyond seizure: a population-based study of comorbidities.
- Author
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Selassie AW, Wilson DA, Martz GU, Smith GG, Wagner JL, and Wannamaker BB
- Subjects
- Adolescent, Adult, Aged, Case-Control Studies, Child, Child, Preschool, Comorbidity, Female, Health Surveys methods, Humans, Infant, Infant, Newborn, Male, Mental Disorders diagnosis, Mental Disorders epidemiology, Middle Aged, Nervous System Diseases diagnosis, Nervous System Diseases epidemiology, Seizures diagnosis, Seizures epidemiology, Young Adult, Epilepsy diagnosis, Epilepsy epidemiology, Population Surveillance methods
- Abstract
Comorbid conditions may affect the quality of life in persons with epilepsy (PWE) more than seizures. Using legally mandated healthcare encounter data, somatic, psychiatric, and neurodevelopmental comorbidities in a large population-based cohort of PWE, were compared to persons with migraine (PWM), a similar neurologic condition, and lower extremity fracture (PWLF), otherwise healthy controls. 64,188 PWE, 121,990 PWM, and 89,808 PWLF were identified from inpatient, outpatient, and emergency department from 2000 to 2011. Epilepsy was ascertained with ICD-9-CM code 345; migraine with 346; fracture of the tibia, fibula, and ankle with 823 and 824. Common comorbidities of epilepsy were identified from the literature. Differences in prevalence among PWE, PWM, and PWLF were assessed by comparison of 95% confidence intervals (CI) constructed under the assumption of independence and normal approximation. The association of the comorbid conditions with epilepsy and migraine, compared to lower extremity fracture, were evaluated with polytomous logistic regression controlling for demographic and mortality covariables. PWE had significantly elevated prevalence of comorbidities compared with PWM and PWLF. Compared with PWLF, the adjusted odds ratios (OR) of having both somatic and psychiatric/neurodevelopmental comorbidities were 5.44 (95% CI=5.25-5.63) and 2.49 (95% CI=2.42-2.55) in PWE and PWM, respectively. The association with epilepsy was the strongest for cognitive dysfunction (OR=28.1; 95% CI=23.3-33.8); autism spectrum disorders (OR=22.2; 95% CI=16.8-29.3); intellectual disability (OR=12.9; 95% CI=11.6-14.3); and stroke (OR=4.2; 95% CI=4.1-4.4). The absolute risk increase in PWE compared with PWM for any somatic or psychiatric/neurodevelopmental comorbidity was 58.8% and 94.3%, respectively. Identifying comorbidities that are strongly and consistently associated with seizures, particularly disorders with shared underlying pathophysiology, is critical in identifying specific research and practice goals that may ultimately improve the quality of life for PWE. This study contributes to that effort by providing population-based comorbidity data for PWE compared with PWM and PWLF., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
40. Reducing the public health risk of Escherichia coli O157 exposure by immunization of cattle.
- Author
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Smith GG, Goebel SE, Culbert CR, and Guilbault LA
- Subjects
- Animals, Canada epidemiology, Disease Reservoirs microbiology, Escherichia coli Infections epidemiology, Escherichia coli Infections microbiology, Humans, Program Evaluation, Public Health Practice, Risk Assessment, Cattle microbiology, Disease Reservoirs veterinary, Escherichia coli Infections prevention & control, Escherichia coli O157 isolation & purification, Immunization veterinary
- Abstract
The One Health approach investigates the complexities surrounding the interplay between the animal, human and environmental domains. Zoonotic pathogens, such as Escherichia coli (E. coli) O157, which have animal reservoirs, also have direct impact on public health. Cattle are the primary reservoir of E. coli O157, however infection with this bacterium is asymptomatic. Infected cattle appear healthy and have normal growth rates and milk production abilities. Each year, thousands of Canadians become ill following exposure to E. coli O157. To reduce this public health risk, immunization of cattle would be an effective intervention. Several models have shown that on-farm pathogen reduction programs would significantly reduce the risk of human illness.
- Published
- 2013
41. Could the eastern rock lobster, Sagmariasus verreauxi, be the best spiny lobster for aquaculture?
- Author
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Battaglene SC, Simon CJ, Fitzgibbon QP, Smith GG, and Carter CG
- Subjects
- Animals, Australia, Larva growth & development, Larva physiology, Palinuridae growth & development, Aquaculture, Palinuridae physiology
- Published
- 2013
42. Quantitative trait loci for electrical seizure threshold mapped in C57BLKS/J and C57BL/10SnJ mice.
- Author
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Ferraro TN, Smith GG, Ballard D, Zhao H, Schwebel CL, Gupta A, Rappaport EF, Ruiz SE, Lohoff FW, Doyle GA, Berrettini WH, and Buono RJ
- Subjects
- Animals, Brain Chemistry genetics, Disease Models, Animal, Electric Stimulation adverse effects, Electric Stimulation methods, Epilepsy physiopathology, Female, Male, Mice, Mice, Inbred C57BL, Mice, Mutant Strains, Chromosome Mapping methods, Epilepsy genetics, Genetic Predisposition to Disease genetics, Quantitative Trait Loci genetics
- Abstract
We mapped the quantitative trait loci (QTL) that contribute to the robust difference in maximal electroshock seizure threshold (MEST) between C57BLKS/J (BKS) and C57BL10S/J (B10S) mice. BKS, B10S, BKS × B10S F1 and BKS × B10S F2 intercross mice were tested for MEST at 8-9 weeks of age. Results of F2 testing showed that, in this cross, MEST is a continuously distributed trait determined by polygenic inheritance. Mice from the extremes of the trait distribution were genotyped using microarray technology. MEST correlated significantly with body weight and sex; however, because of the high correlation between these factors, the QTL mapping was conditioned on sex alone. A sequential series of statistical analyses was used to map QTLs including single-point, multipoint and multilocus methods. Two QTLs reached genome-wide levels of significance based upon an empirically determined permutation threshold: chromosome 6 (LOD = 6.0 at ∼69 cM) and chromosome 8 (LOD = 5.7 at ∼27 cM). Two additional QTLs were retained in a multilocus regression model: chromosome 3 (LOD = 2.1 at ∼68 cM) and chromosome 5 (LOD = 2.7 at ∼73 cM). Together the four QTLs explain one third of the total phenotypic variance in the mapping population. Lack of overlap between the major MEST QTLs mapped here in BKS and B10S mice and those mapped previously in C57BL/6J and DBA/2J mice (strains that are closely related to BKS and B10S) suggest that BKS and B10S represent a new polygenic mouse model for investigating susceptibility to seizures., (© 2010 The Authors. Genes, Brain and Behavior © 2010 Blackwell Publishing Ltd and International Behavioural and Neural Genetics Society.)
- Published
- 2011
- Full Text
- View/download PDF
43. Seeking robust legal counsel/descent of the time vultures.
- Author
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Smith GG
- Subjects
- United States, Radiology legislation & jurisprudence, Time Management
- Published
- 2010
- Full Text
- View/download PDF
44. Confirmation of multiple seizure susceptibility QTLs on chromosome 15 in C57BL/6J and DBA/2J inbred mice.
- Author
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Ferraro TN, Smith GG, Schwebel CL, Doyle GA, Ruiz SE, Oleynick JU, Lohoff FW, Berrettini WH, and Buono RJ
- Subjects
- Animals, Female, Genotype, Male, Mice, Mice, Inbred C57BL, Mice, Inbred DBA, Chromosomes, Mammalian genetics, Genetic Predisposition to Disease genetics, Quantitative Trait Loci genetics, Seizures genetics
- Abstract
To confirm seizure susceptibility (SZS) quantitative trait loci (QTLs) on chromosome (chr) 15 identified previously using C57BL/6J (B6) and DBA/2J (D2) mice and to refine their genomic map position, we studied a set of three congenic strains in which overlapping segments of chr 15 from D2 were transferred onto the B6 background. We measured thresholds for generalized electroshock seizure (GEST) and maximal electroshock seizure (MEST) in congenic strains and B6-like littermates and also tested their responses to kainic acid (KA) and pentylenetetrazol (PTZ). Results document that MEST is significantly lower in strains 15M and 15D, which harbor medial and distal (telomeric) segments of chr 15 (respectively) from D2, compared with strain 15P, which harbors the proximal (acromeric) segment of chr 15 from D2, and with control littermates. Congenic strains 15P and 15M exhibited greater KA SZS compared with strain 15D and B6-like controls. All congenic strains were similar to controls with regard to PTZ SZS. Taken together, results suggest there are multiple SZS QTLs on chr 15 and that two QTLs harbor gene variants that affect MEST and KA SZS independently. The MEST QTL is refined to a 19 Mb region flanked by rs13482630 and D15Mit159. This interval contains 350 genes, 183 of which reside in areas where the polymorphism rate between B6 and D2 is high. The KA QTL interval spans a 65 Mb region flanked by markers D15Mit13 and rs31271969. It harbors 83 genes in highly polymorphic areas, 310 genes in all. Complete dissection of these loci will lead to identification of genetic variants that influence SZS in mice and provide a better understanding of seizure biology.
- Published
- 2010
- Full Text
- View/download PDF
45. ACR White Paper: Task Force to Evaluate the Value Add Impact on Business Models.
- Author
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Lexa F, Berlin JW, Boland GW, Smith GG, Jensen MD, Seidenwurm DJ, Hoppe R, and Stroud R Jr
- Subjects
- Cost-Benefit Analysis, United States, Advisory Committees, Delivery of Health Care organization & administration, Models, Economic, Models, Organizational, Radiology organization & administration
- Abstract
Radiology practices are seeing both evolutionary and revolutionary changes in their business models. The Task Force to Evaluate the Value Add Impact on Business Models was charged with considering how radiologists and their practices add value in these novel settings. Both traditional and novel forms of added value were considered. Types of new business models that were evaluated included hybrid groups of radiologists and other practitioners, regional or national megagroups, and novel services both within and beyond the traditional purview of radiology practice. Recommendations for both how to measure and how to capture this value were considered at both the practice and national levels.
- Published
- 2009
- Full Text
- View/download PDF
46. Dementia in a retired world boxing champion: case report and literature review.
- Author
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Nowak LA, Smith GG, and Reyes PF
- Subjects
- Aged, Arrhythmias, Cardiac complications, Brain Injuries complications, Cerebral Infarction etiology, Cerebral Infarction pathology, Coronary Artery Disease complications, Diabetes Mellitus, Type 1 complications, Heart Failure complications, Humans, Hypertension complications, Immunohistochemistry, Korsakoff Syndrome etiology, Korsakoff Syndrome pathology, Male, Neurofibrillary Tangles pathology, Plaque, Amyloid pathology, Boxing injuries, Brain Injuries pathology, Dementia etiology, Dementia pathology
- Abstract
Objective: Dementia in retired boxers, also referred to as "dementia pugilistica" (DP), is usually attributed to repeated concussive and subconcussive blows to the head. We report the case of a former world boxing champion whose progressive cognitive decline could be ascribed to DP, cerebral infarcts and Wernicke-Korsakoff syndrome. This case demonstrates that dementia in retired boxers may be caused and/or exacerbated by etiologic factors other than DP., Materials and Methods: We correlated the clinical features with the histochemical and immunohistochemical changes observed on autopsy brain material from a retired boxer, reviewed the literature on boxing-related dementia, and compared our findings with previous reports on DP., Results: Neuropathologic examination revealed numerous neurofibrillary tangles (NFTs), rare neuritic plaques (NPs), multiple cerebral infarcts, fenestrated septum pellucidum, atrophic and gliotic mamillary bodies, and pale substantia nigra and locus ceruleus., Conclusions: Our neuropathologic data confirmed the notion that dementia in retired boxers could be due to several factors such as DP, multiple cerebral infarcts and Wernicke-Korsakoff syndrome. Our findings illustrate the need to comprehensively examine former boxers with dementia as well as carefully evaluate the neuropathologic changes that may cause or contribute to the patient's cognitive and behavioral symptoms. Such an approach is crucial in order to provide prompt and more definitive therapies.
- Published
- 2009
47. Subspecialization in radiology and radiation oncology.
- Author
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Smith GG, Thrall JH, Pentecost MJ, Fleishon HB, Knipp HC, Adams MJ, Rumack CM, Blumberg AL, Hoppe RT, Sunshine JH, and Moser JW
- Subjects
- United States, Workforce, Attitude of Health Personnel, Internship and Residency statistics & numerical data, Physicians statistics & numerical data, Radiation Oncology statistics & numerical data, Radiology statistics & numerical data
- Abstract
Practicing radiologists, radiation oncologists, and trainees were surveyed regarding the current state of subspecialization in practice and in training curricula. The authors present the results of these surveys, establish trends compared with previous survey data, and compare the plans of trainees with current postgraduate practice. Subspecialization is increasing in both radiology and radiation oncology. There remain substantial numbers of practitioners who perform work they deem "general" in nature. The authors also present a method to more accurately measure subspecialization and workload.
- Published
- 2009
- Full Text
- View/download PDF
48. Fine mapping of a major QTL influencing morphine preference in C57BL/6 and DBA/2 mice using congenic strains.
- Author
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Doyle GA, Furlong PJ, Schwebel CL, Smith GG, Lohoff FW, Buono RJ, Berrettini WH, and Ferraro TN
- Subjects
- Analgesics, Non-Narcotic pharmacology, Analgesics, Opioid pharmacology, Animals, Animals, Congenic genetics, Chromosome Mapping, Discrimination Learning drug effects, Discrimination Learning physiology, Food Preferences physiology, Genetic Markers genetics, Mice, Mice, Inbred C57BL, Mice, Inbred DBA, Morphine Dependence metabolism, Morphine Dependence physiopathology, Nerve Tissue Proteins genetics, Quinine pharmacology, R-SNARE Proteins genetics, Species Specificity, Brain Chemistry drug effects, Brain Chemistry genetics, Genetic Predisposition to Disease genetics, Morphine pharmacology, Morphine Dependence genetics, Quantitative Trait Loci genetics
- Abstract
C57BL/6J (B6) and DBA/2J (D2) mice differ in behaviors related to substance abuse, including voluntary morphine consumption and preference in a two-bottle choice paradigm. Two major quantitative trait loci (QTL) for morphine consumption and preference exist between these strains on chromosomes (Chrs.) 6 and 10 when the two-bottle choice involves morphine in saccharin vs quinine in saccharin. Here, we report the refinement of the Chr. 10 QTL in subcongenic strains of D2.B6-Mop2 congenic mice described previously. With these subcongenic mouse strains, we have divided the introgressed region of Chr. 10 containing the QTL gene(s) into two segments, one between the acromere and Stxbp5 (in D2.B6-Mop2-P1 mice) and the other between marker D10Mit211 and marker D10Mit51 (in D2.B6-Mop2-D1 mice). We find that, similar to B6 mice, the D2.B6-Mop2-P1 congenic mice exhibit a strong preference for morphine over quinine, whereas D2.B6-Mop2-D1 congenic mice avoid morphine (similar to D2 mice). We have also created a line of double congenic mice, B6.D2-Mop2.Qui, which contains both Chr. 10 and Chr. 6 QTL. We find that they are intermediate in their morphine preference scores when compared with B6 and D2 animals. Overall, these data suggest that the gene(s) involved in morphine preference in the morphine-quinine two-bottle choice paradigm are contained within the proximal region of Chr. 10 (which harbors Oprm1) between the acromere and Stxbp5, as well as on distal Chr. 6 between marker D6Mit10 and the telomere.
- Published
- 2008
- Full Text
- View/download PDF
49. Quantitative trait locus for seizure susceptibility on mouse chromosome 5 confirmed with reciprocal congenic strains.
- Author
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Ferraro TN, Smith GG, Schwebel CL, Lohoff FW, Furlong P, Berrettini WH, and Buono RJ
- Subjects
- Animals, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Chromosome Mapping, Genetic Predisposition to Disease, Quantitative Trait Loci, Seizures genetics
- Abstract
Multiple quantitative trait locus (QTL) mapping studies designed to localize seizure susceptibility genes in C57BL/6 (B6, seizure resistant) and DBA/2 (D2, seizure susceptible) mice have detected a significant effect originating from midchromosome 5. To confirm the presence and refine the position of the chromosome 5 QTL for maximal electroshock seizure threshold (MEST), reciprocal congenic strains between B6 and D2 mice were created by a DNA marker-assisted backcross breeding strategy and studied with respect to changes in MEST. A genomic interval delimited by marker D5Mit75 (proximal to the acromere) and D5Mit403 (distal to the acromere) was introgressed for 10 generations. A set of chromosome 5 congenic strains produced by an independent laboratory was also studied. Comparison of MEST between congenic and control (parental genetic background) mice indicates that genes influencing this trait were captured in all strains. Thus, mice from strains having D2 alleles from chromosome 5 on a B6 genetic background exhibit significantly lower MEST compared with control littermates, whereas congenic mice harboring B6 chromosome 5 alleles on a D2 genetic background exhibit significantly higher MEST compared with control littermates. Combining data from all congenic strains, we conclude that the gene(s) underlying the chromosome 5 QTL for MEST resides in the interval between D5Mit108 (26 cM) and D5Mit278 (61 cM). Generation of interval-specific congenic strains from the primary congenic strains described here may be used to achieve high-resolution mapping of the chromosome 5 gene(s) that contributes to the large difference in seizure susceptibility between B6 and D2 mice.
- Published
- 2007
- Full Text
- View/download PDF
50. Analysis of a quantitative trait locus for seizure susceptibility in mice using bacterial artificial chromosome-mediated gene transfer.
- Author
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Ferraro TN, Golden GT, Dahl JP, Smith GG, Schwebel CL, MacDonald R, Lohoff FW, Berrettini WH, and Buono RJ
- Subjects
- Animals, Blotting, Western, Brain metabolism, Chromosome Mapping, Disease Models, Animal, Electroshock, Female, Gene Expression Regulation, Genetic Predisposition to Disease genetics, Male, Mice, Mice, Congenic, Mice, Inbred C57BL, Mice, Inbred DBA, Models, Genetic, Seizures metabolism, Chromosomes, Artificial, Bacterial genetics, Gene Transfer Techniques, Quantitative Trait Loci genetics, Seizures genetics
- Abstract
Purpose: Previous quantitative trait loci (QTL) mapping studies from our laboratory identified a 6.6 Mb segment of distal chromosome 1 that contains a gene (or genes) having a strong influence on the difference in seizure susceptibility between C57BL/6 (B6) and DBA/2 (D2) mice. A gene transfer strategy involving a bacterial artificial chromosome (BAC) DNA construct that contains several candidate genes from the critical interval was used to test the hypothesis that a strain-specific variation in one (or more) of the genes is responsible for the QTL effect., Methods: Fertilized oocytes from a seizure-sensitive congenic strain (B6.D2-Mtv7a/Ty-27d) were injected with BAC DNA and three independent founder lines of BAC-transgenic mice were generated. Seizure susceptibility was quantified by measuring maximal electroshock seizure threshold (MEST) in transgenic mice and nontransgenic littermates., Results: Seizure testing documented significant MEST elevation in all three transgenic lines compared to littermate controls. Allele-specific RT-PCR analysis confirmed gene transcription from genome-integrated BAC DNA and copy-number-dependent phenotypic effects were observed., Conclusions: Results of this study suggest that the gene(s) responsible for the major chromosome 1 seizure QTL is found on BAC RPCI23-157J4 and demonstrate the utility of in vivo gene transfer for studying quantitative trait genes in mice. Further characterization of this transgenic model will provide new insight into mechanisms of seizure susceptibility.
- Published
- 2007
- Full Text
- View/download PDF
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