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The Acorus calamus group, or sweet flag, includes important medicinal plants and is classified into three species: A. americanus (diploid), A. verus (tetraploid), and A. calamus (sterile triploid of hybrid origin). Members of the group are famous as components of traditional Indian medicine, and early researchers suggested the origin of the sweet flag in tropical Asia. Subsequent research led to an idea of the origin of the triploid A. calamus in the Amur River basin in temperate Asia, because this was the only region where both diploids and tetraploids were known to co-occur and be capable of sexual reproduction. Contrary to this hypothesis, triploids are currently very rare in the Amur basin. Here, we provide the first evidence that all three species occur in Kazakhstan. The new records extend earlier data on the range of A. verus for c. 1800 km. Along the valley of the Irtysh River in Kazakhstan and the adjacent Omsk Oblast of Russia, A. verus is recorded in the south, A. americanus in the north, and A. calamus is common in between. We propose the Irtysh River valley as another candidate for a cradle of the triploid species A. calamus. It is possible that the range of at least one parent species (A. americanus) has contracted through competition with its triploid derivative species, for which the Irtysh River floods provide a tool for downstream range expansion. We refine our earlier data and show that the two parent species have non-overlapping ranges of variation in a quantitative metric of leaf aerenchyma structure. [ABSTRACT FROM AUTHOR]

Commonly considered bispecific, Acorus is one of the most phylogenetically isolated angiosperm genera that forms the order Acorales sister to the rest of the monocots. The Acorus calamus group is widely distributed in the Holarctic regions of Eurasia and America and has strong medicinal and other practical uses since prehistoric times. Earlier studies interpreted native diploids and invasive triploids occurring in North America as two species that differed in morphology and distribution ranges. In contrast, diploids, triploids, and tetraploids occurring in Eurasia are commonly interpreted as one species because they reportedly cannot be distinguished in collections. We resolve the controversy over taxonomic concepts between Eurasia and America and provide the first detailed multidisciplinary account of Acorus in temperate Asia. We used plastid and nuclear markers, leaf anatomy, seed micromorphology, pollen stainability, flow cytometry, and direct chromosome counts. Diploids and tetraploids show stable molecular and micromorphological differences. Triploids are their sterile hybrids, with the plastid genome inherited from the diploid parent. Diploids of America and Asia tend to differ in leaf characters. Coadaptative coexistence with pollinating beetles Platamartus jakowlewi and Sibirhelus corpulentus (Kateretidae) is conserved between diploids and tetraploids and over a distance of 4700 km between Japan and Western Siberia. Diploids are self‐compatible and can set seeds in the absence of kateretid beetles. Tetraploids are self‐incompatible and/or cannot set seeds in the absence of Platamartus and Sibirhelus. Diploids (A. americanus) and tetraploids (A. verus) are two biological species; the former has two subspecies. Acorus calamus should be restricted to triploids; it apparently first evolved in temperate Asia. Diploids mostly occur in much cooler climates than triploids and tetraploids. Accessions of A. verus and A. calamus from tropical Asia are apparently derived from ancient introductions. Our data provide a new framework for the pharmacological use of Acorus. [ABSTRACT FROM AUTHOR]

There are different methods of discretizing integrable systems. We consider semi-discrete analog of two-dimensional Toda lattices associated to the Cartan matrices of simple Lie algebras that was proposed by Habibullin in 2011. This discretization is based on the notion of Darboux integrability. Generalized Toda lattices are known to be Darboux integrable in the continuous case (that is, they admit complete families of characteristic integrals in both directions). We prove that semi-discrete analogs of Toda lattices associated to the Cartan matrices of all simple Lie algebras are Darboux integrable. By examining the properties of Habibullin's discretization we show that if a function is a characteristic integral for a generalized Toda lattice in the continuous case, then the same function is a characteristic integral in the semi-discrete case as well. We consider characteristic algebras of such integral-preserving discretizations of Toda lattices to prove the existence of complete families of characteristic integrals in the second direction. [ABSTRACT FROM AUTHOR]

Mesoporous hydroxyapatite (HA) materials demonstrate advantages as catalysts and as support systems for catalysis, as adsorbent materials for removing contamination from soil and water, and as nanocarriers of functional agents for bone-related therapies. The present research demonstrates the possibility of the enlargement of the Brunauer–Emmett–Teller specific surface area (SSA), pore volume, and average pore diameter via changing the synthesis medium and ripening the material in the mother solution after the precipitation processes have been completed. HA powders were investigated via chemical analysis, X-ray diffraction analysis, Fourier-transform IR spectroscopy, transmission electron microscopy (TEM), and scanning (SEM) electron microscopy. Their SSA, pore volume, and pore-size distributions were determined via low-temperature nitrogen adsorption measurements, the zeta potential was established, and electron paramagnetic resonance (EPR) spectroscopy was performed. When the materials were synthesized in water–ethanol and water–acetone media, the SSA and total pore volume were 52.1 m2g−1 and 116.4 m2g−1, and 0.231 and 0.286 cm3g−1, respectively. After ripening for 21 days, the particle morphology changed, the length/width aspect ratio decreased, and looser and smaller powder agglomerates were obtained. These changes in their characteristics led to an increase in SSA for the water and water–ethanol samples, while pore volume demonstrated a multiplied increase for all samples, reaching 0.593 cm3g−1 for the water–acetone sample. [ABSTRACT FROM AUTHOR]

The roles of intracellular calcium concentration ([[[Ca.sup.2+].sub.i]) and [Ca.sup.2+] sensitization in lipopolysaccharide (LPS)-induced vascular smooth muscle (VSM) hyporesponsiveness are incompletely understood. To investigate these roles, contraction responses to endothelin-1 (ET-1) and 80 mM KC1; relaxation responses to nifedipine; the expression levels of mRNAs of ET-1 and its receptors ([ET.sub.A] or [ET.sub.B]); the expression levels of protein kinase C (PKC) and phosphorylation of Rho kinase (ROK[alpha], CPI-17, and myosin phosphatase target subunit-1 (MYPT1); and changes in aortic VSM cell [[[Ca.sup.2+].sub.i] were measured in LPS-treated aortic rings from male Wistar rats (250-300 g). LPS (10 [micro]g/ml, 20 h) decreased contraction induced by ET-1 (0.3-100 nM) or 80 mM KC1. LPS-induced hypocontractility was not observed in the absence of external [Ca.sup.2+], but LPS-treated aorta remained hypocontractile on subsequent stepwise restoration of extracellular [Ca.sup.2+] (0.01-10 mM). Vascular relaxation to nifedipine; mRNA expression levels of ET-I, [ET.sub.A], or [ET.sub.B]; protein expression levels of PKC; and phosphorylation levels of ROK[alpha], CPI-17, and MYPT1 were not affected by LPS. In isolated aortic VSM cells, ET-1 caused a transient initial increase in [[[Ca.sup.2+].sub.i], followed by a maintained tonic increase in [[[Ca.sup.2+].sub.i], which was decreased by LPS pretreatment and was dependent on external [Ca.sup.2+]. Subsequent restoration of extracellular [Ca.sup.2+] increased [[[Ca.sup.2+].sub.i], but this increase was lower in the LPS-treated group. This difference in response to extracellular [Ca.sup.2+] addition was not affected by diltiazem, but was abolished by SKF-96365. Therefore, LPS induces hyporeactivity to ET-1 in rat aorta that depends on external [Ca.sup.2+] influx through non-voltage-operated [Ca.sup.2+] channels, but not on ET-1 receptor expression or [Ca.sup.2+] sensitization. calcium sensitization; sepsis; vascular smooth muscle

Mitochondria are proposed to be a major oxygen sensor in hypoxic pulmonary vasoconstriction (HPV), a unique response of the pulmonary circulation to low oxygen tension. Mitochondrial factors including reactive oxygen species, cytochrome c, ATP, and magnesium are potent modulators of voltage-gated [K.sup.+] ([K.sub.v]) channels in the plasmalemmal membrane of pulmonary arterial (PA) smooth muscle cells (PASMCs). Mitochondria have also been found close to the plasmalemmal membrane in rabbit main PA smooth muscle sections. Therefore, we hypothesized that differences in mitochondria localization in rat PASMCs and systemic mesenteric arterial smooth muscle cells (MASMCs) may contribute to the divergent oxygen sensitivity in the two different circulations. Cellular localization of mitochondria was compared with immunofluorescent labeling, and differences in functional coupling between mitochondria and [K.sub.v] channels was evaluated with the patch-clamp technique and specific mitochondrial inhibitors antimycin A (acting at complex III of the mitochondrial electron transport chain) and oligomycin A (which inhibits the ATP synthase). It was found that mitochondria were located significantly closer to the plasmalemmal membrane in PASMCs compared with MASMCs. Consistent with these findings, the effects of the mitochondrial inhibitors on [K.sub.v] current ([I.sub.Kv]) were significantly more potent in PASMCs than in MASMCs. The cytoskeletal disruptor cytochalasin B (10 [micro]M) also altered mitochondrial distribution in PASMCs and significantly attenuated the effect of antimycin A on the voltage-dependent parameters of [I.sub.Kv]. These findings suggest a greater structural and functional coupling between mitochondria and [K.sub.v] channels specifically in PASMCs, which could contribute to the regulation of PA excitability in HPV. pulmonary artery; vascular smooth muscle cells; mesenteric artery; [K.sup.+] channel activation; [K.sup.+] channel inactivation; confocal imaging; patch-clamp technique

Voltagegated [K.sup.+] (Kv) channels are important in the regulation of pulmonary vascular function having both physiological and pathophysiological implications. The pulmonary vasculature is essential for reoxygenation of the blood, supplying oxygen for cellular respiration. Mitochondria have been proposed as the major oxygen-sensing organelles in the pulmonary vasculature. Using electrophysiological techniques and immunofluorescence, an interaction of the mitochondria with Kv channels was investigated. Inhibitors, blocking the mitochondrial electron transport chain at different complexes, were shown to have a dual effect on Kv currents in freshly isolated rat pulmonary arterial smooth muscle cells (PASMCs). These dual effects comprised an enhancement of Kv current in a negative potential range (manifested as a 5- to 14-mV shift in the Kv activation to more negative membrane voltages) with a decrease in current amplitude at positive potentials. Such effects were most prominent as a result of inhibition of Complex III by antimycin A. Investigation of the mechanism of antimycin A-mediated effects on Kv channel currents ([I.sub.Kv]) revealed the presence of a mitochondria-mediated [Mg.sup.2+] and ATP-dependent regulation of Kv channels in PASMCs, which exists in addition to that currently proposed to be caused by changes in intracellular reactive oxygen species. rat; Kv channel currents; antimycin A; magnesium ions; ATP; Kv channel activation

Background The herbarium of the South-Siberian Botanical Garden of Altai State University (ALTB) houses the largest collection of plants from the Altai Mountain Country (AMC), an area that extends across Russia, Kazakhstan, Mongolia and China. The collection of ALTB includes more than 450,00 specimens, making it the seventh largest in Russia and the fourth largest amongst Russian university herbaria. Altai State University (ASU), the home of ALTB, is one of the most important centres of academic education and research in Siberia and the Russian Far East. It is a sociocultural centre that provides a distinguished learning environment for undergraduate and graduate students in many scholarly and professional fields, meeting the needs of today's knowledge-based post-industrial society and contributing to regional development. It actively promotes international cooperation and strategic collaboration amongst countries of the AMC in the fields of science, education and culture. In particular, the activities of the South-Siberian Botanical Garden include: development of measures to protect rare and endangered plant species, research on the flora and vegetation of the AMC, preparation and publication of a multi-volume work "Flora Altaica", monographic study of individual plant groups, conducting laboratory classes, summer practicals and special courses. The main purpose of this article is to attract the attention of the scientific community to the botanical research of transboundary territory of the Altai Mountain Country (Russia, Kazakhstan, China and Mongolia) and to the future development of digital plant collections in partnership with Global Biodiversity Information Facility (GBIF). [ABSTRACT FROM AUTHOR]

Finding morphological differences between cytotypes that are stable throughout their geographical range is important for understanding evolution of polyploid complexes. The ancient monocot lineage Acorus includes two groups, of which A. calamus s.l. , an important medicinal plant, is a polyploid complex with a centre of diversity in Asia. European plants are sterile triploids introduced by humans. An early study suggested that plants from temperate Asia are tetraploids, but subsequent work revealed diploids and triploids rather than tetraploids in Asiatic Russia; however, cytotype diversity in Western Siberia is insufficiently known. We document the occurrence of diploids and triploids in Western Siberia. Triploids that do not differ in genome size from European Acorus are abundant in the valley of the river Ob where the ability for extensive vegetative propagation provides ecological advantages. An isolated population of aneuploid triploids with 33 chromosomes is found outside the Ob valley. Flow cytometry provides an efficient tool for identification of aneuploid plants in Acorus. All triploids are sterile, but their flowers develop uniform parthenocarpic fruits. Fruits of diploids usually vary in size within a spadix depending on the number of developing seeds. In contrast to North America, where the native diploid plants differ from the introduced triploids by the absence of a secondary midrib of the ensiform leaf blade, Siberian diploids are similar to triploids in possessing a secondary midrib. We confirm that diploids differ from triploids in the size of air lacunae in leaves, which is determined by cell number rather than cell size in septa of aerenchyma. A combination of spathe width and spadix length measured after the male stage of anthesis shows different (slightly overlapping) patterns of variation between diploids and triploids in our material. [ABSTRACT FROM AUTHOR]

Abstract Background Putrescine is the intermediate product of arginine decarboxylase pathway in Escherichia coli which can be used as an alternative nitrogen source. Transaminase and dehydrogenase enzymes seem to be implicated in the degradative pathway of putrescine, in which this compound is converted into γ-aminobutyrate. But genes coding for these enzymes have not been identified so far. Results The 1.8-kbp DNA fragment containing E. coli K12 ygjG gene with aer-ygjG intergenic region was examined. It was found that the fragment contains σ54-depended open reading frame (ORF) of 1,380 nucleotides encoding a 459-amino acid polypeptide of approximately 49.6 kDa. The cytidine (C) residue localized 10 bp downstream of the σ54 promoter sequence was identified as the first mRNA base. The UUG translation initiation codon is situated 36 nucleotides downstream of the mRNA start. The YgjG was expressed as a his6-tag fused protein and purified to homogeneity. The protein catalyzed putrescine:2-oxoglutaric acid (2-OG) aminotransferase reaction (PATase, EC 2.6.1.29). The Km values for putrescine and 2-OG were found to be 9.2 mM and 19.0 mM, respectively. The recombinant enzyme also was able to transaminate cadaverine and, in lower extent, spermidine, and gave maximum activity at pH 9.0. Conclusion Expression of E. coli K12 ygjG coding region revealed σ54-depended ORF which encodes a 459-amino acid protein with putrescine:2-OG aminotransferase activity. The enzyme also was able to transaminate cadaverine and, in lower extent, spermidine.

The dehydroshikimate dehydratase (DSD) from Corynebacterium glutamicum encoded by the qsuB gene is related to the previously described QuiC1 protein (39.9% identity) from Pseudomonas putida. Both QuiC1 and QsuB are two-domain bacterial DSDs. The N-terminal domain provides dehydratase activity, while the C-terminal domain has sequence identity with 4-hydroxyphenylpyruvate dioxygenase. Here, the QsuB protein and its N-terminal domain (N-QsuB) were expressed in the T7 system, purified and characterized. QsuB was present mainly in octameric form (60%), while N-QsuB had a predominantly monomeric structure (80%) in aqueous buffer. Both proteins possessed DSD activity with one of the following cofactors (listed in the order of decreasing activity): Co2+, Mg2+, Mn2+. The Km and kcat values for the QsuB enzyme (Km ~ 1 mM, kcat ~ 61 s-1) were two and three times higher than those for N-QsuB. 3,4-DHBA inhibited QsuB (Ki ~ 0.38 mM, Ki' ~ 0.96 mM) and N-QsuB (Ki ~ 0.69 mM) enzymes via mixed and noncompetitive inhibition mechanism, respectively. E. coli MG1655ΔaroEPlac‒qsuB strain produced three times more 3,4-DHBA from glucose in test tube fermentation than the MG1655ΔaroEPlac‒n-qsuB strain. The C-terminal domain activity towards 3,4-DHBA was not established in vitro. This domain was proposed to promote protein oligomerization for maintaining structural stability of the enzyme. The dimer formation of QsuB protein was more predictable (ΔG = ‒15.8 kcal/mol) than the dimerization of its truncated version N-QsuB (ΔG = ‒0.4 kcal/mol). [ABSTRACT FROM AUTHOR]