96 results on '"Shimokawa O"'
Search Results
2. Maternal uniparental isodisomy and heterodisomy on chromosome 6 encompassing a CUL7 gene mutation causing 3M syndrome
- Author
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Sasaki, K, Okamoto, N, Kosaki, K, Yorifuji, T, Shimokawa, O, Mishima, H, Yoshiura, K-i, and Harada, N
- Published
- 2011
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3. Non-hotspot-related breakpoints of common deletions in Sotos syndrome are located within destabilised DNA regions
- Author
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Visser, R, Shimokawa, O, Harada, N, Niikawa, N, and Matsumoto, N
- Published
- 2005
4. Subtelomere specific microarray based comparative genomic hybridisation: a rapid detection system for cryptic rearrangements in idiopathic mental retardation
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Harada, N, Hatchwell, E, Okamoto, N, Tsukahara, M, Kurosawa, K, Kawame, H, Kondoh, T, Ohashi, H, Tsukino, R, Kondoh, Y, Shimokawa, O, Ida, T, Nagai, T, Fukushima, Y, Yoshiura, K, Niikawa, N, and Matsumoto, N
- Published
- 2004
5. NITRIC OXIDE INDUCED TUMOR SPECIFIC FLUORESCENCE: S24-130
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Matsui, H., Shimokawa, O., Nagano, Y., Matsuzaki, Y., Nakahara, A., and Tanaka, N.
- Published
- 2004
6. Identification of eight novel NSD1 mutations in Sotos syndrome
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Kamimura, J, Endo, Y, Kurotaki, N, Kinoshita, A, Miyake, N, Shimokawa, O, Harada, N, Visser, R, Ohashi, H, Miyakawa, K, Gerritsen, J, Innes, A M, Lagace, L, Frydman, M, Okamoto, N, Puttinger, R, Raskin, S, Resic, B, Culic, V, Yoshiura, K, Ohta, T, Kishino, T, Ishikawa, M, Niikawa, N, and Matsumoto, N
- Published
- 2003
7. A 4-Mb critical region for intrauterine growth retardation at 15q26
- Author
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Harada, N, Shimokawa, O, Nagai, T, Kato, R, Kondoh, T, Niikawa, N, and Matsumoto, N
- Published
- 2002
8. A 4q21-q22 deletion in a girl with severe growth retardation
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Harada, N, Nagai, T, Shimokawa, O, Niikawa, N, and Matsumoto, N
- Published
- 2002
9. VP28.06: Which fetuses are indicated for prenatal‐targeted exome sequencing testing? Increased NT or structural anomalies?
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Pooh, R.K., Takeda, M., Matsuzawa, N., Nakamura, T., Chiyo, H., Ohashi, H., and Shimokawa, O.
- Subjects
FETAL ultrasonic imaging ,FETUS ,ULTRASONIC imaging ,SKELETAL dysplasia ,BRAIN abnormalities - Abstract
Conclusions The high TES+ive rate of 32.8% in fetal ultrasonography abnormal cases was obtained in our data. In brain abnormalities, TES+ive rates of ventriculomegaly and malformations of cortical development (MCD) were 33.3% and 33.3%, respectively. We analysed retrospectively the TES results and detailed ultrasound findings done before genetic tests in our centre. [Extracted from the article]
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- 2021
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10. Prenatal findings in a fetus with contiguous gene syndrome caused by deletion of Xp22.3 that includes locus for X-linked recessive type of chondrodysplasia punctata (CDPX1)
- Author
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Horikoshi T, Kikuchi A, Tamaru S, Ono K, Kita M, Takagi K, Miyashita S, Kawame H, Shimokawa O, and Harada N
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- 2010
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11. Deficient utilization of succinate in a sterol 14α-demethylation mutant of Candida albicans.
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Shimokawa, O. and Nakayama, H.
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- 1991
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12. Phenotypes of Candida albicans sterol mutants deficient in Δ8,7-isomerization or 5-desaturation.
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Shimokawa, O. and Nakyama, H.
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- 1991
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13. A Candida albicans mutant conditionally defective in sterol 14α-demethylation.
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Shimokawa, O. and Nakayama, H.
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- 1989
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14. Open isthmus and lambda (Λ) sign of early Joubert syndrome: elucidating development of molar tooth sign.
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Pooh RK, Takeda M, Itoh K, Yoshimatsu J, Ogo K, Machida M, Ohashi H, and Shimokawa O
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- 2024
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15. Compound heterozygous variants in RAB34 in a rare skeletal ciliopathy syndrome.
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Batkovskyte D, Komatsu M, Hammarsjö A, Pooh R, Shimokawa O, Ikegawa S, Grigelioniene G, Nishimura G, and Yamada T
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- Humans, Animals, Mice, Syndrome, rab GTP-Binding Proteins genetics, Cleft Lip, Cleft Palate diagnostic imaging, Cleft Palate genetics, Ciliopathies diagnostic imaging, Ciliopathies genetics, Ciliopathies pathology, Polydactyly genetics, Abnormalities, Multiple genetics
- Abstract
Skeletal ciliopathies are a heterogenous group of congenital disorders characterized by multiple internal abnormalities, and distinct radiographic presentation. Pathogenic variants in at least 30 cilia genes are known to cause skeletal ciliopathies. Here we report a fetus with an atypical skeletal ciliopathy phenotype and compound heterozygous variants in the RAB34 gene. The affected fetus had multiple malformations, including posterior neck edema, micrognathia, low-set and small ears, auricular hypoplasia, cleft lip and palate, short extremities, and a combination of rarely occurring pre- and postaxial polydactyly. Genome sequencing identified compound heterozygous variants in the RAB34 gene: maternal c.254T>C, p.(Ile85Thr), and paternal c.691C>T, p.(Arg231*) variants. Only the paternal variant was present in the unaffected sibling. Evidence in the literature indicated that Rab34
-/- mice displayed a ciliopathy phenotype with cleft palate and polydactyly. These features were consistent with malformations detected in our patient supporting the pathogenicity of the identified RAB34 variants. Overall, this case report further expands genetic landscape of human ciliopathy syndromes and suggests RAB34 as a candidate gene for skeletal ciliopathies., (© 2023 The Authors. Clinical Genetics published by John Wiley & Sons Ltd.)- Published
- 2024
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16. Aortic Dissection and a Previously Unreported ACTA2 Missense Variant Mutation in a Young Patient: A Case Report.
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Marutani S, Nishino T, Shimokawa O, Pooh RK, Morisaki H, and Inamura N
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- Male, Humans, Adolescent, Mutation, Mutation, Missense, Actins genetics, Aortic Dissection genetics, Aortic Dissection surgery, Aortic Aneurysm, Thoracic diagnosis, Aortic Aneurysm, Thoracic genetics, Aortic Aneurysm, Thoracic surgery
- Abstract
Hereditary connective tissue disease is known to cause aortic lesions at an early age. Familial aortic aneurysm/dissection is caused due to an ACTA2 mutation that affects smooth muscle structure. We present a case of a 15-year-old boy with a mild developmental disorder in whom no abnormalities were identified on previous physical examinations. The patient presented with severe left heart failure, extensive dissection from the ascending aorta to the common iliac artery, and myocardial and cerebral infarctions. He underwent an urgent Bentall surgery. Six months later, the patient underwent surgical reconstruction of the abdominal aorta from the aortic arch and returned to normal daily activities. Pathological examination demonstrated the absence of elastic fibers but presence of abundant reticular fibers and mucopolysaccharides from the tunica intima to the media. Genetic testing revealed a heterozygous missense variant of the ACTA2 gene. To the best of our knowledge, this is the first sporadic case of structurally abnormal smooth muscle organization resulting in clinical symptoms with no previously reported pathogenicity., Competing Interests: Declaration of Conflicting InterestsThe authors declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
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- 2023
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17. Somatic mosaicism of the PI3K-AKT-MTOR pathway is associated with hemimegalencephaly in fetal brains.
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Itoh K, Pooh R, Shimokawa O, and Fushiki S
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- Humans, Proto-Oncogene Proteins c-akt metabolism, Phosphatidylinositol 3-Kinases metabolism, Mosaicism, TOR Serine-Threonine Kinases metabolism, Brain pathology, Mutation, Hemimegalencephaly genetics, Hemimegalencephaly metabolism, Hemimegalencephaly pathology, Polymicrogyria metabolism, Polymicrogyria pathology
- Abstract
It is known that somatic activation of PI3K-AKT-MTOR signaling causes malformations of cortical development varying from hemimegalencephaly to focal cortical dysplasia. However, there have been few reports of fetal cases. Here we report two fetal cases of hemimegalencephaly, one associated with mosaic mutations in PIK3CA and another in AKT1. Both brains showed polymicrogyria, multiple subarachnoidal, subcortical, and subventricular heterotopia resulting from abnormal proliferation of neural stem/progenitor cells, cell differentiation, and migration of neuroblasts. Scattered cell nests immunoreactive for phosphorylated-S6 ribosomal protein (P-RPS6) (Ser240/244) were observed in the polymicrogyria-like cortical plate, intermediate zone, and arachnoid space, suggesting that the PI3K-AKT-MTOR pathway was actually activated in these cells. Pathological analyses could shed light on the mechanisms involved in disrupted brain development in the somatic mosaicism of the PI3K-AKT-MTOR pathway., (© 2022 Japanese Society of Neuropathology.)
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- 2023
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18. Clinical Validation of Fetal cfDNA Analysis Using Rolling-Circle-Replication and Imaging Technology in Osaka (CRITO Study).
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Pooh RK, Masuda C, Matsushika R, Machida M, Nakamura T, Takeda M, Ohashi H, Kumagai M, Uenishi K, Roos F, Persson F, and Shimokawa O
- Abstract
Background: Noninvasive prenatal genetic testing (NIPT) has been adopted as the first choice for aneuploidy screening. The purposes of this study were to investigate the accuracy of Vanadis
® NIPT (hereafter CRITO-NIPT) in order to gain a deeper insight into the reasons for discrepancies, as well as to discuss the role of fetal ultrasound., Methods: Between 2019 and 2020, CRITO-NIPT was performed in 1218 cases of patients who underwent CVS or amniocentesis after a detailed fetal ultrasound exam and genetic counseling. The CRITO-NIPT results were compared with the genetic results. In cases of test discrepancies, the placentae were collected for detailed genetic research, and the pre-procedure fetal ultrasound findings were referred to., Results: The positive predictive value of T21, T18, and T13 was 93.55%, 88.46%, and 100%, respectively. In 90% of the of false positive (FP) cases, the placentae were examined. In 75% of the CRITO FP-T21 cases, placental mosaicism, or a demised twin's T21, were confirmed. There were complicated mosaic cases, including tetrasomy 21/trisomy7 and monosomy 21/trisomy21 cases. In one of three no-call cases, an intermediate deletion of chromosome 13 was detected., Conclusions: The CRITO study investigated the mechanism of false positives, and the detailed mechanisms in mosaic and no-call cases. There have hitherto been no reports that have provided insight by partitioning the placenta to compare the NIPT and invasive test results, nor that have provided detailed ultrasound findings in the cases of discordant results, revealing the demonstrated importance of, and necessity for, detailed ultrasonography. This article describes the potential of rolling-circle replication as a powerful biosensing platform, as well as the importance of examining the fetus in detail with ultrasound. However, we should remember that the potential applications raise ethical and social concerns that go beyond aneuploidy and its methodology.- Published
- 2021
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19. Fetal Megalencephaly with Cortical Dysplasia at 18 Gestational Weeks Related to Paternal UPD Mosaicism with PTEN Mutation.
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Pooh RK, Machida M, Imoto I, Arai EN, Ohashi H, Takeda M, Shimokawa O, Fukuta K, Shiozaki A, Saito S, and Chiyo H
- Subjects
- Abortion, Induced, Chromosomes, Human, Pair 10 genetics, Female, Humans, Male, Malformations of Cortical Development genetics, Megalencephaly genetics, Mosaicism, Mutation, Paternal Inheritance, Polymorphism, Single Nucleotide, Pregnancy, Pregnancy Trimester, Second, Malformations of Cortical Development diagnostic imaging, Megalencephaly diagnostic imaging, PTEN Phosphohydrolase genetics, Trisomy genetics, Uniparental Disomy genetics
- Abstract
The phosphatase and tensin homolog ( PTEN ) gene is a tumor-suppressor gene located on 10q22-23. Since the introduction of molecular genetics in prenatal diagnostics, various birth defects associated with gene mutations have been diagnosed. However, no reports on fetal cases related to PTEN mutation have been found, so far. We encountered a rare case of fetal PTEN mutation. Fetal macrocephaly was noted at 16 weeks. At 18 and 20 weeks, neurosonography revealed megalencephaly with an asymmetrical structure and multifocal polygyria. The head circumference (HC) was +6.2 SD at 18 weeks and +8.1 SD at 20 weeks. The parents opted for pregnancy termination, and the male fetus was delivered at 21 weeks, with HC +9.3 SD. Single-nucleotide polymorphism (SNP) array for amniotic cells showed paternal uniparental disomy (UPD) 10q mosaicism, and the mosaic ratio was calculated as 56% from B-allele frequency. Exome sequencing revealed the pathogenic PTEN mutation with mosaicism. The heterozygous PTEN mutation may not cause early manifestations from the fetal period, and an abnormal phenotype may appear after birth. This may be the reason why fetal defects associated with PTEN mutation are not detected. Since this case had homozygous and heterozygous mutations, survival was possible, exhibiting an incredibly huge head with cortical dysplasia from early pregnancy.
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- 2021
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20. D-karyo-A New Prenatal Rapid Screening Test Detecting Submicroscopic CNVs and Mosaicism.
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Shimokawa O, Takeda M, Ohashi H, Shono-Ota A, Kumagai M, Matsushika R, Masuda C, Uenishi K, and Kimata Pooh R
- Abstract
Chromosomal microarray analysis (CMA), recently introduced following conventional cytogenetic technology, can detect submicroscopic copy-number variations (CNVs) in cases previously diagnosed as "cytogenetically benign". At present, rapid and accurate chromosomal analysis is required in prenatal diagnostics, but prenatal CMA is not widely used due to its high price and long turnaround time. We introduced a new prenatal screening method named digital karyotyping (D-karyo), which utilizes a preimplantation genetic test for the aneuploidy (PGT-A) platform. First, we conducted a preliminary experiment to compare the original PGT-A method to our modified method. Based on the preliminary results, we decided to implement the modified strategy without whole-genome amplification (WGA) and combined it with three analytical software packages. Next, we conducted a prospective study with 824 samples. According to the indication for invasive tests, the D-karyo positive rates were 2.5% and 5.0%, respectively, in the screening positive group with NT ≥ 3.5 mm and the group with fetal abnormalities by ultrasound. D-karyo is a breakthrough modality that can detect submicroscopic CNVs ≥ 1.0 Mb accurately in only 10.5 h for 24 samples at a low cost. Implementing D-karyo as a prenatal rapid screening test will reduce unnecessary CMA and achieve more accurate prenatal genetic testing than G-banding.
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- 2021
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21. Detailed analysis of 26 cases of 1q partial duplication/triplication syndrome.
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Watanabe S, Shimizu K, Ohashi H, Kosaki R, Okamoto N, Shimojima K, Yamamoto T, Chinen Y, Mizuno S, Dowa Y, Shiomi N, Toda Y, Tashiro K, Shichijo K, Minatozaki K, Aso S, Minagawa K, Hiraki Y, Shimokawa O, Matsumoto T, Fukuda M, Moriuchi H, Yoshiura K, and Kondoh T
- Subjects
- Adolescent, Adult, Child, Child, Preschool, Chromosome Banding, Chromosome Disorders diagnosis, Chromosome Disorders genetics, Comparative Genomic Hybridization, Facies, Humans, Infant, Male, Phenotype, Syndrome, Young Adult, Chromosome Deletion, Chromosome Duplication, Chromosomes, Human, Pair 1, Genetic Association Studies
- Abstract
Partial 1q trisomy syndrome is a rare disorder. Because unbalanced chromosomal translocations often occur with 1q trisomy, it is difficult to determine whether patient symptoms are related to 1q trisomy or other chromosomal abnormalities. The present study evaluated genotype-phenotype correlations of 26 cases diagnosed with 1q partial trisomy syndrome. DNA microarray was used to investigate the duplication/triplication region of 16 cases. Although there was no overlapping region common to all 26 cases, the 1q41-qter region was frequently involved. One case diagnosed as a pure interstitial trisomy of chromosome 1q by G-banded karyotype analysis was instead found to be a pure partial tetrasomy by CytoScan HD Array. In four 1q trisomy syndrome cases involving translocation, the translocated partner chromosome could not be detected by DNA microarray analyzes despite G-banded karyotype analysis, because there were a limited number of probes available for the partner region. DNA microarray and G-banded karyotyping techniques were therefore shown to be compensatory diagnostic tools that should be used by clinicians who suspect chromosomal abnormalities. It is important to continue recruiting affected patients and observe and monitor their symptoms to reveal genotype-phenotype correlations and to fully understand their prognosis and identify causal regions of symptoms., (© 2016 Wiley Periodicals, Inc.)
- Published
- 2016
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22. Congenital diaphragmatic hernia interval on chromosome 8p23.1 characterized by genetics and protein interaction networks.
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Longoni M, Lage K, Russell MK, Loscertales M, Abdul-Rahman OA, Baynam G, Bleyl SB, Brady PD, Breckpot J, Chen CP, Devriendt K, Gillessen-Kaesbach G, Grix AW, Rope AF, Shimokawa O, Strauss B, Wieczorek D, Zackai EH, Coletti CM, Maalouf FI, Noonan KM, Park JH, Tracy AA, Lee C, Donahoe PK, and Pober BR
- Subjects
- Animals, Chromosome Deletion, Chromosomes, Human, Pair 8 genetics, Chromosomes, Human, Pair 8 metabolism, DNA blood, DNA genetics, DNA Glycosylases genetics, DNA-(Apurinic or Apyrimidinic Site) Lyase genetics, Female, GATA4 Transcription Factor genetics, Heart Defects, Congenital blood, Heart Defects, Congenital genetics, Heart Defects, Congenital metabolism, Hernia, Diaphragmatic blood, Hernia, Diaphragmatic genetics, Hernia, Diaphragmatic metabolism, Humans, Karyotyping, Mice, Mice, Inbred C57BL, Phenotype, Pregnancy, Protein Interaction Maps, SOXF Transcription Factors genetics, Hernias, Diaphragmatic, Congenital
- Abstract
Chromosome 8p23.1 is a common hotspot associated with major congenital malformations, including congenital diaphragmatic hernia (CDH) and cardiac defects. We present findings from high-resolution arrays in patients who carry a loss (n = 18) or a gain (n = 1) of sub-band 8p23.1. We confirm a region involved in both diaphragmatic and heart malformations. Results from a novel CNVConnect algorithm, prioritizing protein-protein interactions between products of genes in the 8p23.1 hotspot and products of previously known CDH causing genes, implicated GATA4, NEIL2, and SOX7 in diaphragmatic defects. Sequence analysis of these genes in 226 chromosomally normal CDH patients, as well as in a small number of deletion 8p23.1 patients, showed rare unreported variants in the coding region; these may be contributing to the diaphragmatic phenotype. We also demonstrated that two of these three genes were expressed in the E11.5-12.5 primordial mouse diaphragm, the developmental stage at which CDH is thought to occur. This combination of bioinformatics and expression studies can be applied to other chromosomal hotspots, as well as private microdeletions or microduplications, to identify causative genes and their interaction networks., (Copyright © 2012 Wiley Periodicals, Inc.)
- Published
- 2012
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23. Bisphosphonate-induced gastrointestinal mucosal injury is mediated by mitochondrial superoxide production and lipid peroxidation.
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Nagano Y, Matsui H, Shimokawa O, Hirayama A, Nakamura Y, Tamura M, Rai K, Kaneko T, and Hyodo I
- Abstract
Bisphosphonates such as alendronate and risedronate are commonly used for the treatment of postmenopausal osteoporosis. They have the gastrointestinal adverse effects such as erosions and ulcers in stomach and small intestine. However, the detailed biological mechanism remains to be elucidated. Since alendronate is suggested to increase the risk of non-steroidal anti-inflammatory drug-related gastropathy, we hypothesized that bisphosphonates and non-steroidal anti-inflammatory drugs have the same pathophysiological mechanisms in gastrointestinal mucosa: Bisphosphonates may induce cellular lipid peroxidation by inducing the production of mitochondrial superoxide. We also hypothesized that geranylgeranylacetone, an antiulcer drug, may prevent lipid peroxidation by reducing superoxide production. We treated gastric RGM1 cells and small intestinal IEC6 cells with alendronate or risedronate, and examined cellular injury, lipid peroxidation and superoxide production with specific fluorescent dyes, and underwent electron paramagnetic resonance spectroscopy to detect the production of superoxide in vitro. The results indicated that bisphosphonates indeed induced cellular injury, cellular lipid peroxidation, and superoxide production. We also demonstrated that the pretreatment of geranylgeranylacetone decreased superoxide production and prevented cellular lipid peroxidation. These results suggested that bisphosphonates, like non-steroidal anti-inflammatory drugs, induce lipid peroxidation by producing mitochondrial superoxide, which was prevented by geranylgeranylacetone.
- Published
- 2012
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24. Rebamipide attenuates nonsteroidal anti-inflammatory drugs (NSAID) induced lipid peroxidation by the manganese superoxide dismutase (MnSOD) overexpression in gastrointestinal epithelial cells.
- Author
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Nagano Y, Matsui H, Shimokawa O, Hirayama A, Tamura M, Nakamura Y, Kaneko T, Rai K, Indo HP, Majima HJ, and Hyodo I
- Subjects
- Alanine pharmacology, Animals, Anti-Inflammatory Agents, Non-Steroidal adverse effects, Cell Line, Epithelial Cells physiology, Intestine, Small cytology, Lipid Peroxidation drug effects, Membrane Potential, Mitochondrial drug effects, Mitochondria drug effects, Mitochondria physiology, Rats, Stomach cytology, Alanine analogs & derivatives, Anti-Ulcer Agents pharmacology, Antioxidants pharmacology, Epithelial Cells drug effects, Quinolones pharmacology, Superoxide Dismutase biosynthesis
- Abstract
Nonsteroidal anti-inflammatory drugs (NSAIDs) often cause gastrointestinal complications such as gastric ulcers and erosions. Recent studies on the pathogenesis have revealed that NSAIDs induce lipid peroxidation in gastric epithelial cells by generating superoxide anion in mitochondria, independently with cyclooxygenase-inhibition and the subsequent prostaglandin deficiency. Although not clearly elucidated, the impairment of mitochondrial oxidative phosphorylation, or uncoupling, by NSAIDs is associated with the generation of superoxide anion. Physiologically, superoxide is immediately transformed into hydrogen peroxide and diatomic oxygen with manganese superoxide dismutase (MnSOD). Rebamipide is an antiulcer agent that showed protective effects against NSAID-induced lipid peroxidation in gastrointestinal tracts. We hypothesized that rebamipide may attenuate lipid peroxidation by increasing the expression of MnSOD protein in mitochondria and decreasing the leakage of superoxide anion in NSAID-treated gastric and small intestinal epithelial cells. Firstly, to examine rebamipide increases the expression of MnSOD proteins in mitochondria of gastrointestinal epithelial cells, we underwent Western blotting analysis against anti-MnSOD antibody in gastric RGM1 cells and small intestinal IEC6 cells. Secondly, to examine whether the pretreatment of rebamipide decreases NSAID-induced mitochondrial impairment and lipid peroxidation, we treated these cells with NSAIDs with or without rebamipide pretreatment, and examined with specific fluorescent indicators. Finally, to examine whether pretreatment of rebamipide attenuates NSAID-induced superoxide anion leakage from mitochondria, we examined the mitochondria from indomethacin-treated RGM1 cells with electron spin resonance (ESR) spectroscopy using a specific spin-trapping reagent, CYPMPO. Rebamipide increased the expression of MnSOD protein, and attenuated NSAID-induced mitochondrial impairment and lipid peroxidation in RGM1 and IEC6 cells. The pretreatment of rebamipide significantly decreased the signal intensity of superoxide anion from the mitochondria. We conclude that rebamipide attenuates lipid peroxidation by increasing the expression of MnSOD protein and decreasing superoxide anion leakage from mitochondria in both gastric and small intestinal epithelial cells.
- Published
- 2012
25. NSAIDs and acidic environment induce gastric mucosal cellular mitochondrial dysfunction.
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Nagano Y, Matsui H, Tamura M, Shimokawa O, Nakamura Y, Kaneko T, and Hyodo I
- Subjects
- Animals, Anti-Inflammatory Agents, Non-Steroidal pharmacology, Cell Culture Techniques, Cell Survival drug effects, Epithelial Cells, Gastric Acid, Gastric Mucosa physiopathology, Hydrogen-Ion Concentration, Mitochondria physiology, Rats, Stomach Ulcer chemically induced, Superoxides metabolism, Anti-Inflammatory Agents, Non-Steroidal adverse effects, Gastric Mucosa drug effects, Lipid Peroxidation drug effects, Mitochondria drug effects, Stomach Ulcer physiopathology
- Abstract
Non-steroidal anti-inflammatory drugs (NSAIDs) often cause gastrointestinal complications such as gastric ulcers and erosions. Recent studies on the pathogenesis have revealed that NSAIDs induce lipid peroxidation in gastric epithelial cells by generating superoxide in mitochondria, independently with cyclooxygenase inhibition and the subsequent prostaglandin deficiency. More recently, gastric hydrochloric acid (HCl) has been regarded as an inciting factor of gastric mucosal injuries, and reportedly induced cellular lipid peroxidation in vitro. We hypothesized that gastric acid and NSAID treatment synergistically induce cellular injury in gastric epithelial cells. We treated gastric epithelial RGM1 cells with acidic solutions and NSAIDs, and examined cellular injury, lipid peroxidation, mitochondrial transmenbrane potential and mitochondrial superoxide. We pretreated RGM1 cells with the acidic solutions for 0.5 h and after that treated them with each NSAID for 15 h and found that the exposure to acid and NSAIDs indeed induced cellular injury. We hypothesized that gastric acid and NSAID treatment synergistically induce mitochondrial superoxide production, which induces gastric cellular injury., (Copyright © 2012 S. Karger AG, Basel.)
- Published
- 2012
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26. Axenfeld-Rieger anomaly and Axenfeld-Rieger syndrome: clinical, molecular-cytogenetic, and DNA array analyses of three patients with chromosomal defects at 6p25.
- Author
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Tonoki H, Harada N, Shimokawa O, Yosozumi A, Monzaki K, Satoh K, Kosaki R, Sato A, Matsumoto N, and Iizuka S
- Subjects
- Anterior Eye Segment abnormalities, Child, Preschool, Chromosome Banding, Comparative Genomic Hybridization, Eye Abnormalities diagnosis, Eye Diseases, Hereditary, Female, Forkhead Transcription Factors genetics, Humans, Infant, Infant, Newborn, Male, Phenotype, Chromosome Aberrations, Chromosomes, Human, Pair 6, Eye Abnormalities genetics
- Abstract
Clinical phenotypes of and genetic aberrations in three unrelated Japanese patients with Axenfeld-Rieger anomalies and various accompanying malformations of systemic organs are described. GTG-banded chromosome analysis showed terminal deletions of the short arm of chromosome 6 in two patients and an inversion, inv(6)(p25q14), in the other. FISH and DNA array analyses revealed that the two patients with deletions had 5.0-5.7 Mb and 6.6 Mb 6p terminal deletions, respectively, and FOXC1 was apparently deleted in both patients. In the other patient, the inversion breakpoint at 6p25 was estimated to be in or very close to the FOXC1 locus, but DNA array analysis did not reveal a deletion around the breakpoint. Common extraocular findings in these patients included broad forehead, brachycephaly, hypertelorism, downslanting palpebral fissures, small anteverted nose, and cardiac defects. Two patients also exhibited autistic characteristics. The two patients with deletions exhibited poor muscle tone and developmental delays. Most of these extraocular findings were similar to those found in previous patients with FOXC1 mutations and distinct from those found in patients with PITX2 mutations, who frequently develop umbilical and dental anomalies. We suggest that the psychomotor retardation is a clinical manifestation associated with a deletion of multiple contiguous genes in the 6p terminus and that this phenomenon is similar to the 6p25 deletion syndrome. Understanding the relationship between genetic lesions and the spectrum of extraocular findings in patients with Axenfeld-Rieger anomalies may lead to better clinical management., (Copyright © 2011 Wiley Periodicals, Inc.)
- Published
- 2011
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27. De novo 5q14.3 translocation 121.5-kb upstream of MEF2C in a patient with severe intellectual disability and early-onset epileptic encephalopathy.
- Author
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Saitsu H, Igarashi N, Kato M, Okada I, Kosho T, Shimokawa O, Sasaki Y, Nishiyama K, Tsurusaki Y, Doi H, Miyake N, Harada N, Hayasaka K, and Matasumoto N
- Subjects
- Abnormal Karyotype, Agenesis of Corpus Callosum genetics, Blotting, Southern, Child, Child, Preschool, Chromosome Breakpoints, Cloning, Molecular, Electroencephalography, Epilepsy physiopathology, Female, Humans, In Situ Hybridization, Fluorescence, Infant, Intellectual Disability physiopathology, MADS Domain Proteins metabolism, MEF2 Transcription Factors, Magnetic Resonance Imaging, Myogenic Regulatory Factors metabolism, Physical Chromosome Mapping, RNA, Untranslated genetics, Seizures genetics, Seizures physiopathology, Chromosomes, Human, Pair 5 genetics, Epilepsy genetics, Intellectual Disability genetics, MADS Domain Proteins genetics, Myogenic Regulatory Factors genetics, Translocation, Genetic
- Abstract
Recent studies have shown that haploinsufficiency of MEF2C causes severe intellectual disability, epilepsy, hypotonia, and cerebral malformations. We report on a female patient with severe intellectual disability, early-onset epileptic encephalopathy, and hypoplastic corpus callosum, possessing a de novo balanced translocation, t(5;15)(q13.3;q26.1). The patient showed upward gazing and tonic seizure of lower extremities followed by generalized clonic seizures at 4 months of age. Electroencephalogram showed hypsarrhythmia when asleep. By using fluorescent in situ hybridization (FISH), southern hybridization and inverse PCR, the translocation breakpoints were determined at the nucleotide level. The 5q14.3 breakpoint was localized 121.5-kb upstream of MEF2C. The 15q26.2 breakpoint was mapped 119-kb downstream of LOC91948 non-coding RNA. We speculate that the translocation may disrupt the proper regulation of MEF2C expression in the developing brain, resulting in severe intellectual disability and early-onset epileptic encephalopathy., (Copyright © 2011 Wiley Periodicals, Inc.)
- Published
- 2011
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28. Gastric acid induces mitochondrial superoxide production and lipid peroxidation in gastric epithelial cells.
- Author
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Matsui H, Nagano Y, Shimokawa O, Kaneko T, Rai K, Udo J, Hirayama A, Nakamura Y, Indo HP, Majima HJ, and Hyodo I
- Subjects
- Animals, Apoptosis, Cell Line, Electron Spin Resonance Spectroscopy, Gastric Mucosa metabolism, Hydrochloric Acid administration & dosage, Hydrochloric Acid toxicity, Hydrogen-Ion Concentration, Lipid Peroxidation physiology, Membrane Potential, Mitochondrial physiology, Rats, Superoxide Dismutase metabolism, Superoxides metabolism, Epithelial Cells metabolism, Gastric Acid physiology, Gastric Mucosa pathology, Mitochondria metabolism
- Abstract
Background: Gastric hydrochloric acid (HCl) has been regarded as an inciting factor in gastric mucosal injuries and has been reported to induce lipid peroxidation in vitro. However, because HCl is not an oxidant per se, the exact mechanism by which the acid induces lipid peroxidation is unknown. We hypothesized that gastric acid may disrupt mitochondrial transmembrane potential and induce the production of superoxide in mitochondria, which subsequently may induce lipid peroxidation and apoptosis in gastric mucosal cells., Methods: Firstly we treated gastric epithelial RGM1 cells with solutions containing various concentrations of HCl (i.e., of varying pH), and examined cellular injury, lipid peroxidation, and apoptosis with specific fluorescent dyes. Secondly, we performed electron paramagnetic resonance (EPR) spectroscopy of isolated, acid-exposed mitochondria from the cells, using a spin-trapping reagent for superoxide, 5-(2,2-dimethyl-1,3-propoxy cyclophosphoryl)-5-methyl-1-pyrroline N-oxide (CYPMPO). Finally, we established novel RGM1 cells that overexpressed manganese superoxide dismutase (MnSOD), which removes superoxide from mitochondria, and examined the effect of acid treatment on cellular membrane lipid peroxidation., Results: The results indicated that the exposure to acid indeed induced cellular injury, cellular lipid peroxidation, apoptosis, and the demonstration of the exact superoxide spectra on EPR spectroscopy in gastric epithelial cells, and that overexpression of MnSOD decreased superoxide production and prevented cellular lipid peroxidation., Conclusion: These results suggested that gastric acid, like nonsteroidal anti-inflammatory drugs (NSAIDs), induces mitochondrial superoxide production, which induces gastric cellular injury by triggering cellular lipid peroxidation and apoptosis.
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- 2011
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29. Lansoprazole inhibits mitochondrial superoxide production and cellular lipid peroxidation induced by indomethacin in RGM1 cells.
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Rai K, Matsui H, Kaneko T, Nagano Y, Shimokawa O, Udo J, Hirayama A, Hyodo I, Indo HP, and Majima HJ
- Abstract
Lansoprazole is effective in healing non-steroidal anti-inflammatory drugs induced ulcers, and antioxidant properties have been thought to play a key role in healing ulcers. We hypothesize that lansoprazole exerts a cytoprotective effect by inhibiting reactive oxygen species leakage from mitochondria and lipid peroxidation. We pretreated gastric epithelial RGM1 cells with lansoprazole and then treated them with indomethacin in vitro. We found that the lansoprazole pretreatment significantly reduced cellular injury, maintained mitochondrial transmembrane potential, and decreased lipid peroxidation. Furthermore, the signal intensity of the electron spin resonance spectrum of the indomethacin-treated mitochondria which were pretreated with lansoprazole showed considerable reduction compared to those without the lansoprazole pretreatment. These results suggest that lansoprazole reduced superoxide production in the mitochondria of indomethacin treated cells, and subsequently inhibited lipid peroxide and cellular injury in gastric epithelial cells.
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- 2011
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30. The pathophysiology of non-steroidal anti-inflammatory drug (NSAID)-induced mucosal injuries in stomach and small intestine.
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Matsui H, Shimokawa O, Kaneko T, Nagano Y, Rai K, and Hyodo I
- Abstract
Non-steroidal anti-inflammatory drugs are the most commonly prescribed drugs for arthritis, inflammation, and cardiovascular protection. However, they cause gastrointestinal complications. The pathophysiology of these complications has mostly been ascribed to non-steroidal anti-inflammatory drugs' action on the cyclooxygenase inhibition and the subsequent prostaglandin deficiency. However, recent clinical demonstrated the prevalence of non-steroidal anti-inflammatory drugs-induced small intestinal mucosal injury is more often than previously expected. In this review, we discuss the defense mechanisms of stomach, and the pathophysiology of non-steroidal anti-inflammatory drugs-induced injury of stomach and small intestine, especially focused on non-steroidal anti-inflammatory drugs' action on mitochondria.
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- 2011
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31. Prenatal diagnosis of Costello syndrome using 3D ultrasonography amniocentesis confirmation of the rare HRAS mutation G12D.
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Kuniba H, Pooh RK, Sasaki K, Shimokawa O, Harada N, Kondoh T, Egashira M, Moriuchi H, Yoshiura K, and Niikawa N
- Subjects
- Amniocentesis, Base Sequence, Craniofacial Abnormalities diagnostic imaging, DNA Mutational Analysis, Female, Humans, Infant, Newborn, Male, Phenotype, Pregnancy, Syndrome, Ultrasonography, Prenatal, Abnormalities, Multiple diagnostic imaging, Abnormalities, Multiple genetics, Craniofacial Abnormalities genetics, Genes, ras, Mutation, Missense, Polyhydramnios diagnostic imaging, Polyhydramnios genetics
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- 2009
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32. Precision of high-throughput single-nucleotide polymorphism genotyping with fingernail DNA: comparison with blood DNA.
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Nakashima M, Tsuda M, Kinoshita A, Kishino T, Kondo S, Shimokawa O, Niikawa N, and Yoshiura K
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- DNA blood, Humans, Reproducibility of Results, DNA genetics, Nails chemistry, Polymorphism, Single Nucleotide
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- 2008
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33. Neoplastic transformation and induction of H+,K+ -adenosine triphosphatase by N-methyl-N'-nitro-N-nitrosoguanidine in the gastric epithelial RGM-1 cell line.
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Shimokawa O, Matsui H, Nagano Y, Kaneko T, Shibahara T, Nakahara A, Hyodo I, Yanaka A, Majima HJ, Nakamura Y, and Matsuzaki Y
- Subjects
- Animals, Carcinogens metabolism, Cell Line, Epithelial Cells ultrastructure, Rats, Rats, Wistar, Cell Transformation, Neoplastic, Epithelial Cells physiology, Gastric Mucosa cytology, H(+)-K(+)-Exchanging ATPase metabolism, Methylnitronitrosoguanidine metabolism
- Abstract
N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) induces gastric cancer in animal models. We established an MNNG-induced mutant of the rat murine RGM-1 gastric epithelial cell line, which we named RGK-1, that could be used as an in vitro model of gastric cancer. This cell line showed signs of neoplasia and transformation, in that it lost contact inhibition and formed tumors in nude mice. The mutant cells also expressed parietal cell-specific H(+),K(+)-adenosine triphosphatase (H(+),K(+)-ATPase), which parent RGM-1 did not. The results suggested that parent RGM-1 cells were gastric progenitor cells. This mutant RGK-1 cell line will contribute to future investigation on gastric carcinogenesis and to the development of other pathophysiologic fields.
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- 2008
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34. Microarray comparative genomic hybridization analysis of 59 patients with schizophrenia.
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Mizuguchi T, Hashimoto R, Itokawa M, Sano A, Shimokawa O, Yoshimura Y, Harada N, Miyake N, Nishimura A, Saitsu H, Sosonkina N, Niikawa N, Kunugi H, and Matsumoto N
- Subjects
- Chromosomes, Artificial, Bacterial, Female, Humans, In Situ Hybridization, Fluorescence, Karyotyping, Male, Chromosome Aberrations, Nucleic Acid Hybridization methods, Oligonucleotide Array Sequence Analysis methods, Schizophrenia genetics
- Abstract
Schizophrenia is a common psychiatric disorder with a strong genetic contribution. Disease-associated chromosomal abnormalities in this condition may provide important clues, such as DISC1. In this study, 59 schizophrenia patients were analyzed by microarray comparative genomic hybridization (CGH) using custom bacterial artificial chromosome (BAC) microarray (4,219 BACs with 0.7-Mb resolution). Chromosomal abnormalities were found in six patients (10%): 46,XY,der(13)t(12;13)(p12.1; p11).ish del(5)(p11p12); 46,XY, ish del(17)(p12p12); 46,XX.ish dup(11)(p13p13); and 46,X,idic(Y)(q11.2); and in two cases, mos 45,X/46XX. Autosomal abnormalities in three cases are likely to be pathogenic, and sex chromosome abnormalities in three follow previous findings. It is noteworthy that 10% of patients with schizophrenia have (sub)microscopic chromosomal abnormalities, indicating that genome-wide copy number survey should be considered in genetic studies of schizophrenia.
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- 2008
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35. A girl with Down syndrome and partial trisomy for 21pter-q22.13: a clue to narrow the Down syndrome critical region.
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Sato D, Kawara H, Shimokawa O, Harada N, Tonoki H, Takahashi N, Imai Y, Kimura H, Matsumoto N, Ariga T, Niikawa N, and Yoshiura K
- Subjects
- Aneuploidy, Centromere, Chromosome Banding, Chromosome Breakage, Chromosome Painting, Chromosomes, Human, Pair 13 genetics, Down Syndrome pathology, Female, Fluorescent Dyes, Humans, In Situ Hybridization, Fluorescence, Infant, Karyotyping, Metaphase, Chromosomes, Human, Pair 21, Down Syndrome genetics, Trisomy
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- 2008
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36. Cellular membrane fluidity measurement by fluorescence polarization in indomethacin-induced gastric cellular injury in vitro.
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Kaneko T, Matsui H, Shimokawa O, Nakahara A, and Hyodo I
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- Animals, Cell Line, Epithelial Cells chemistry, Epithelial Cells drug effects, Membrane Lipids metabolism, Organophosphorus Compounds analysis, Phospholipids metabolism, Pyrenes analysis, Rats, Sensitivity and Specificity, Vitamin E pharmacology, Fluorescence Polarization methods, Gastric Mucosa drug effects, Indomethacin toxicity, Membrane Fluidity drug effects
- Abstract
Background: Gastric complications of indomethacin involve generation of reactive oxygen species, which induce gastric mucosal injury via lipid peroxidation of cell membranes. Peroxidation by reactive oxygen species alters the amounts of unsaturated fatty acids in the cell membrane and thus affects membrane fluidity. Indomethacin-induced lipid peroxidation can thus be detected by measuring cellular membrane fluidity by the fluorescence polarization (FP) method. The aim of this study was to elucidate the usefulness of the FP method for detecting indomethacin-induced gastric cellular injury in RGM-1 cells., Methods: Indomethacin-treated RGM-1 cells were investigated by conventional cytotoxicity assay, fluorometry of diphenyl-1-pyrenylphosphine (DPPP) to detect lipid peroxidation, and FP. The effects of both a radical scavenger and an initiator on membrane fluidity change (MFC) in RGM-1 cells were examined. The sensitivity of FP in detecting cellular injury was compared with those of DPPP fluorometry and conventional cytotoxicity measurements., Results: Indomethacin caused an increase in MFC as determined by FP before cytotoxicity was detected by conventional methods. The increase in MFC was associated with increased membrane phospholipid peroxidation (MPP) but not with a prostaglandin deficiency, and the increases in both MFC and MPP were prevented by vitamin E., Conclusions: The FP method is potentially useful for detecting cellular injury in vitro.
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- 2007
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37. Congenital arhinia: molecular-genetic analysis of five patients.
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Sato D, Shimokawa O, Harada N, Olsen OE, Hou JW, Muhlbauer W, Blinkenberg E, Okamoto N, Kinoshita A, Matsumoto N, Kondo S, Kishino T, Miwa N, Ariga T, Niikawa N, and Yoshiura K
- Subjects
- Abnormalities, Multiple pathology, Child, Preschool, Chromosome Aberrations, Chromosome Breakage, Chromosome Deletion, Chromosomes, Human, Pair 12, Chromosomes, Human, Pair 3, Collagen Type VIII genetics, Coproporphyrinogen Oxidase genetics, DNA Mutational Analysis, Female, Genome, Human, Humans, In Situ Hybridization, Fluorescence, Infant, Infant, Newborn, Karyotyping, Male, Nucleic Acid Hybridization methods, Physical Chromosome Mapping, Abnormalities, Multiple genetics, Nose abnormalities
- Abstract
Congenital arhinia, complete absence of the nose, is an extremely rare anomaly with unknown cause. To our knowledge, a total of 36 cases have been reported, but there has been no molecular-genetic study on this anomaly. We encountered a sporadic case of congenital arhinia associated with a de novo chromosomal translocation, t(3;12)(q13.2;p11.2). This led us to analyze the patient by BAC-based FISH for translocation breakpoints and whole-genome array CGH for other possible deletions/duplications in the genome. We found in this patient an approximately 19 Mb deletion spanning from 3q11.2 to 3q13.31 but no disruption of any gene(s) at the other breakpoint, 12p11.2. As the deleted segment at 3q was a strong candidate region containing the putative arhinia gene, we also performed the array CGH in four other arhinia patients with normal karyotypes, as well as mutation analysis of two genes, COL8A1 and CPOX, selected among hundreds of genes located to the deleted region, because they are expressed during early stages of human craniofacial development. However, in the four patients, there were no copy number aberrations in the region examined or no mutations in the two genes. Although our study failed to identify the putative arhinia gene, the data may become a clue to unravel the underlying mechanism of arhinia., ((c) 2007 Wiley-Liss, Inc.)
- Published
- 2007
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38. The role of nitric oxide in delta-aminolevulinic acid (ALA)-induced photosensitivity of cancerous cells.
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Yamamoto F, Ohgari Y, Yamaki N, Kitajima S, Shimokawa O, Matsui H, and Taketani S
- Subjects
- Animals, CHO Cells, Cell Line, Cell Survival drug effects, Cell Survival radiation effects, Cricetinae, Cricetulus, Ferrochelatase biosynthesis, Humans, Interferon-gamma pharmacology, Kidney embryology, Lipopolysaccharides pharmacology, Macrophages drug effects, Mice, Nitric Oxide Synthase Type II biosynthesis, Protoporphyrins biosynthesis, omega-N-Methylarginine pharmacology, Aminolevulinic Acid pharmacology, Nitric Oxide physiology, Photosensitizing Agents pharmacology
- Abstract
Application of delta-aminolevulinic acid (ALA) results in the endogenous accumulation of protoporphyrin IX and is a useful approach in the photodynamic therapy (PDT) of cancers. To investigate the role of nitric oxide (NO) in the specific accumulation of protoporphyrin and ALA-induced PDT of cancerous cells, we transfected inducible-nitric oxide synthase (NOS2) cDNA into human embryonic kidney (HEK) 293T cells and examined the ALA-induced photo-damage as well as the accumulation of porphyrin in the cells. When the NOS2-expressing HEK293T cells were treated with ALA and then exposed to visible light, they became more sensitive to the light with accumulating porphyrins, as compared with the ALA-treated control cells. An increase in the generation of NO in transfected cells led to the accumulation of protoporphyrin with a concomitant decrease of ferrochelatase, the final step enzyme of heme biosynthesis. When mouse macrophage-like RAW264.7 cells were cultured with lipopolysaccharide and interferon-gamma, the expression of NOS2 was induced. The addition of ALA to these cells led to the accumulation of protoporphyrin and cell death upon exposure to light. The treatment of cells with an NOS inhibitor, NG-monomethyl-L-arginine acetate, resulted in the inhibition of protoporphyrin accumulation and cell death. The levels of mitochondrial ferrochelatase and rotenone-sensitive NADH dehydrogenase in the NOS2-induced cells decreased. These results indicated that the generation of NO augments the ALA-induced accumulation of protoporphyrin IX and subsequent photo-damage in cancerous cells by decreasing the levels of mitochondrial iron-containing enzymes. Based on the fact that the production of NO in cancerous cells is elevated, NO in the cells is responsible for susceptibility with ALA-induced PDT.
- Published
- 2007
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39. Angelman syndrome caused by an identical familial 1,487-kb deletion.
- Author
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Sato K, Iwakoshi M, Shimokawa O, Sakai H, Ohta T, Saitoh S, Miyake N, Niikawa N, Harada N, Saitsu H, Mizuguchi T, and Matsumoto N
- Subjects
- Adult, Angelman Syndrome diagnosis, Base Sequence, Child, Preschool, DNA Mutational Analysis, Female, Humans, In Situ Hybridization, Fluorescence, Male, Pedigree, Phenotype, Angelman Syndrome genetics, Chromosome Deletion, Chromosomes, Human, Pair 15 genetics
- Published
- 2007
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40. Array comparative genomic hybridization analysis in first-trimester spontaneous abortions with 'normal' karyotypes.
- Author
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Shimokawa O, Harada N, Miyake N, Satoh K, Mizuguchi T, Niikawa N, and Matsumoto N
- Subjects
- Chromosome Aberrations, Chromosomes, Artificial, Bacterial genetics, Female, Humans, Karyotyping, Nucleic Acid Hybridization, Oligonucleotide Array Sequence Analysis, Pregnancy, Abortion, Spontaneous genetics, Chromosome Deletion, Chromosomes, Human, Pair 13 genetics, Chromosomes, Human, Pair 3 genetics, Pregnancy Trimester, First genetics
- Abstract
Array comparative genomic hybridization (array CGH) analysis was conducted in chorionic villous samples from 20 first-trimester spontaneous abortions with G-banding normal chromosomes. A microarray, containing 2,173 BAC clones and covering the whole genome with a 1.5-Mb resolution, was constructed and used in the analysis. Two deletions were identified: a 1.4-Mb deletion at 3p26.2-p26.3 and a 13.7-Mb deletion at 13q32.3-qter. Reexamination of chromosome preparations from the sample with the 13.7-Mb deletion documented a mixture of cells with the 13q- chromosome and those with 46,XX chromosomes, the latter of which are likely to have been derived from contaminating decidual cells. This left the 1.4-Mb 3p deletion as the only instance with submicroscopic imbalance detected, giving a frequency of 1 in 19 (5%) G-banding normal abortions.
- Published
- 2006
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41. Neuroradiologic findings in Sotos syndrome.
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Horikoshi H, Kato Z, Masuno M, Asano T, Nagase T, Yamagishi Y, Kozawa R, Arai T, Aoki M, Teramoto T, Omoya K, Matsumoto N, Kurotaki N, Shimokawa O, Kurosawa K, and Kondo N
- Subjects
- Child, Preschool, Humans, Magnetic Resonance Imaging, Magnetic Resonance Spectroscopy, Male, Syndrome, Tomography, Emission-Computed, Single-Photon, Brain diagnostic imaging, Brain pathology, Developmental Disabilities diagnosis, Facies, Growth Disorders diagnosis
- Abstract
Sotos syndrome is a well-known anomaly syndrome characterized by overgrowth, characteristic facial gestalt, and developmental delay, and haploinsufficiency of the NSD1 gene has been revealed as one of the major genetic causes. However, there have been only a few reports on neuroradiologic findings by computed tomography (CT) or magnetic resonance imaging (MRI), and functional examination of the brain has not been reported. We examined three cases with typical Sotos syndrome, which also were confirmed by genetic analysis with a specific probe for the NSD1 gene. The results of MRI showed the characteristic features that have been reported previously. The findings obtained by using single-photon emission computed tomography and magnetic resonance spectroscopy suggested an association between mental delay and behavioral tendency in Sotos syndrome and immaturity in frontal brain function.
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- 2006
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42. BAC array CGH reveals genomic aberrations in idiopathic mental retardation.
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Miyake N, Shimokawa O, Harada N, Sosonkina N, Okubo A, Kawara H, Okamoto N, Kurosawa K, Kawame H, Iwakoshi M, Kosho T, Fukushima Y, Makita Y, Yokoyama Y, Yamagata T, Kato M, Hiraki Y, Nomura M, Yoshiura K, Kishino T, Ohta T, Mizuguchi T, Niikawa N, and Matsumoto N
- Subjects
- Chromosome Banding, Chromosome Deletion, Female, Humans, In Situ Hybridization, Fluorescence, Intellectual Disability etiology, Karyotyping, Male, Translocation, Genetic, Chromosome Aberrations, Chromosomes, Artificial, Bacterial genetics, Genome, Human, Intellectual Disability genetics, Nucleic Acid Hybridization methods
- Abstract
Array using 2,173 BAC clones covering the whole human genome has been constructed. All clones spotted were confirmed to show a unique signal at the predicted chromosomal location by FISH analysis in our laboratory. A total of 30 individuals with idiopathic mental retardation (MR) were analyzed by comparative genomic hybridization using this array. Three deletions, one duplication, and one unbalanced translocation could be detected in five patients, which are likely to contribute to MR. The constructed array was shown to be an efficient tool for the detection of pathogenic genomic rearrangements in MR patients as well as copy number polymorphisms (CPNs)., (2006 Wiley-Liss, Inc.)
- Published
- 2006
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43. No detectable genomic aberrations by BAC array CGH in Kabuki make-up syndrome patients.
- Author
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Miyake N, Shimokawa O, Harada N, Sosonkina N, Okubo A, Kawara H, Okamoto N, Ohashi H, Kurosawa K, Naritomi K, Kaname T, Nagai T, Shotelersuk V, Hou JW, Fukushima Y, Kondoh T, Matsumoto T, Shinoki T, Kato M, Tonoki H, Nomura M, Yoshiura K, Kishino T, Ohta T, Niikawa N, and Matsumoto N
- Subjects
- Abnormalities, Multiple pathology, Chromosome Deletion, Chromosomes, Artificial, Bacterial genetics, Female, Gene Duplication, Genome, Human, Growth Disorders pathology, Humans, In Situ Hybridization, Fluorescence, Male, Syndrome, Abnormalities, Multiple genetics, Chromosome Aberrations, Face abnormalities, Intellectual Disability pathology, Nucleic Acid Hybridization methods
- Published
- 2006
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44. Nevo syndrome with an NSD1 deletion: a variant of Sotos syndrome?
- Author
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Kanemoto N, Kanemoto K, Nishimura G, Kamoda T, Visser R, Shimokawa O, and Matsumoto N
- Subjects
- Chromosome Deletion, Chromosomes, Human, Pair 5 genetics, Female, Growth Disorders pathology, Histone Methyltransferases, Histone-Lysine N-Methyltransferase, Humans, In Situ Hybridization, Fluorescence, Infant, Syndrome, Gene Deletion, Growth Disorders genetics, Intracellular Signaling Peptides and Proteins genetics, Nuclear Proteins genetics
- Abstract
A 17-month-old girl with clinical manifestations of Nevo syndrome and NSD1 (nuclear receptor binding SET domain protein 1) deletion is described. Nevo syndrome is a rare overgrowth syndrome showing considerable phenotypic overlap with Sotos syndrome-another, more frequent overgrowth syndrome caused by NSD1 mutations or deletions. About a half of Japanese Sotos syndrome patients carry a 2.2-Mb common deletion encompassing NSD1 and present with frequent brain, cardiovascular, or urinary tract anomalies. The girl we described had the common deletion and showed patent ductus arteriosus, atrial septal defect, vesicoureteral reflux, and bilateral hydronephrosis. It was thus concluded that the clinical manifestations, including the Nevo syndrome phenotype, were caused by the microdeletion., ((c) 2005 Wiley-Liss, Inc.)
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- 2006
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45. Microarray comparative genomic hybridization (CGH)-based prenatal diagnosis for chromosome abnormalities using cell-free fetal DNA in amniotic fluid.
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Miura S, Miura K, Masuzaki H, Miyake N, Yoshiura KI, Sosonkina N, Harada N, Shimokawa O, Nakayama D, Yoshimura S, Matsumoto N, Niikawa N, and Ishimaru T
- Subjects
- Amniotic Fluid cytology, Cell-Free System, DNA metabolism, Fetus cytology, Fetus metabolism, Humans, Karyotyping, Amniotic Fluid chemistry, Chromosome Aberrations, DNA analysis, Oligonucleotide Array Sequence Analysis methods, Prenatal Diagnosis methods
- Abstract
Cell-free fetal DNA (cffDNA) in the supernatant of amniotic fluid, which is usually discarded, can be used as a sample for prenatal diagnosis. For rapid prenatal diagnosis of frequent chromosome abnormalities, for example trisomies 13, 18, and 21, and monosomy X, using cffDNA, we have developed a targeted microarray-based comparative genomic hybridization (CGH) panel on which BAC clones from chromosomes 13, 18, 21, X, and Y were spotted. Microarray-CGH analysis was performed for a total of 13 fetuses with congenital anomalies using cffDNA from their uncultured amniotic fluid. Microarray CGH with cffDNA led to successful molecular karyotyping for 12 of 13 fetuses within 5 days. Karyotypes of the 12 fetuses (one case of trisomy 13, two of trisomy 18, two of trisomy 21, one of monosomy X, and six of normal karyotype) were later confirmed by conventional chromosome analysis using cultured amniocytes. The one fetus whose molecular-karyotype was indicated as normal by microarray CGH actually had a balanced translocation, 45,XY,der(14;21)(q10;q10). The results indicated that microarray CGH with cffDNA is a useful rapid prenatal diagnostic method at late gestation for chromosome abnormalities with copy-number changes, especially when combined with conventional karyotyping of cultured amniocytes.
- Published
- 2006
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46. Mechanisms involved in delta-aminolevulinic acid (ALA)-induced photosensitivity of tumor cells: relation of ferrochelatase and uptake of ALA to the accumulation of protoporphyrin.
- Author
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Ohgari Y, Nakayasu Y, Kitajima S, Sawamoto M, Mori H, Shimokawa O, Matsui H, and Taketani S
- Subjects
- Aminolevulinic Acid metabolism, Animals, BALB 3T3 Cells, Cell Line, Tumor, Humans, Mice, Photosensitizing Agents metabolism, Aminolevulinic Acid pharmacology, Ferrochelatase metabolism, Photosensitizing Agents pharmacology, Protoporphyrins metabolism
- Abstract
Photodynamic therapy (PDT) using delta-aminolevulinic acid (ALA)-induced accumulation of protoporphyrin IX is a useful approach to the early detection and treatment of cancers. To investigate the role of ferrochelatase in the accumulation of protoporphyrin, we first made mouse fibroblast Balb/3T3 cells highly expressing ferrochelatase and examined the ALA-induced photo-damage as well as the accumulation of porphyrin in the cells. When the ferrochelatase-transfected cells were treated with ALA and then exposed to visible light, they became resistant to the light without accumulating porphyrins, with a concomitant increase in the formation of heme. The accumulation of protoporphyrin was also abolished in human erythroleukemia K562 cells stably expressing mouse ferrochelatase. When mouse fibrosarcoma MethA cells, mouse fibroblast L929 cells and Balb/3T3 cells were treated with ALA, the greatest accumulation of protoporphyrin and the greatest level of cell death in response to the light were observed in MethA cells. The expression level of ferrochelatase was the lowest in MethA cells, while that of porphobilinogen deaminase was similar among all three cell lines. Moreover, an iron-chelator, desferrioxamine, which sequesters iron preventing the ferrochelatase reaction, enhanced the photo-damage as well as the accumulation of protoporphyrin in ALA-treated L929 cells. Thus, the light-induced cell death was tightly coupled with the accumulation of protoporphyrin caused by a decrease in ferrochelatase. Finally, we examined the uptake of ALA by MethA, L929 and Balb/3T3 cells. The extent of the uptake by MethA and L929 cells was greater, indicating a greater accumulation of protoporphyrin than in the Balb/3T3 cells. Taken together, not only the low level of ferrochelatase but also the augmented uptake of ALA contributes to the ALA-induced accumulation of protoporphyrin IX and subsequent photo-damage in cancer cells.
- Published
- 2005
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47. Relationship between MIC and minimum sterol 14{alpha}-demethylation-inhibitory concentration as a factor in evaluating activities of azoles against various fungal species.
- Author
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Shimokawa O, Niimi M, Kikuchi K, Saito M, Kajiwara H, and Yoshida S
- Subjects
- Acetates, Aspergillus fumigatus drug effects, Candida drug effects, Chromatography, Thin Layer, Culture Media, Humans, Lanosterol metabolism, Mitosporic Fungi drug effects, Mitosporic Fungi growth & development, Mitosporic Fungi metabolism, Mycoses microbiology, Species Specificity, Sterols metabolism, Azoles pharmacology, Fungi drug effects, Microbial Sensitivity Tests methods
- Abstract
The minimum growth-inhibitory concentrations (MICs) of azole antifungals were compared to their minimum sterol 14alpha-demethylation-inhibitory concentrations (MDICs) for clinical fungal isolates. The ascomycetous Candida yeasts tested were clearly divided into two groups: group I, consisting of C. albicans, C. tropicalis, and C. lusitaniae, had MICs that were much higher than the MDICs, whereas group II, comprising C. glabrata, C. parapsilosis, C. guilliermondii, and C. krusei, had MICs that were approximately equal to the MDICs. In the ascomycetous fungi Aspergillus fumigatus and Sporothrix schenckii, the MICs were indistinguishable from the MDICs. In the basidiomycetous fungi Cryptococcus (Filobasidiella) neoformans, C. curvatus, and Trichosporon asahii, the MICs and the MDICs were practically identical. These results support the notion that there are two distinct classes of fungi differing in their degree of tolerance to sterol 14alpha-demethylation deficiency. These findings have significant implications for both fungal physiology and antifungal chemotherapy.
- Published
- 2005
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48. Klippel-Feil anomaly in a boy and Dubowitz syndrome with vertebral fusion in his brother: a new variant of Dubowitz syndrome?
- Author
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Takahira S, Kondoh T, Sumi M, Tagawa M, Obatake M, Kinoshita E, Shimokawa O, Harada N, Miyake N, Matsumoto N, and Moriuchi H
- Subjects
- Child, Child, Preschool, Diagnosis, Differential, Eczema diagnosis, Genetic Variation, Humans, Infant, Infant, Newborn, Klippel-Feil Syndrome diagnosis, Male, Microcephaly diagnosis, Radiography, Scapula abnormalities, Scapula diagnostic imaging, Spine diagnostic imaging, Syndrome, Tracheal Stenosis diagnosis, Tracheal Stenosis genetics, Eczema genetics, Klippel-Feil Syndrome genetics, Microcephaly genetics, Spine abnormalities
- Published
- 2005
- Full Text
- View/download PDF
49. Rebamipide significantly inhibits indomethacin-induced mitochondrial damage, lipid peroxidation, and apoptosis in gastric epithelial RGM-1 cells.
- Author
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Nagano Y, Matsui H, Muramatsu M, Shimokawa O, Shibahara T, Yanaka A, Nakahara A, Matsuzaki Y, Tanaka N, and Nakamura Y
- Subjects
- Alanine pharmacology, Animals, Apoptosis drug effects, Cell Culture Techniques, Fluorescent Dyes, Lipid Peroxidation, Membrane Potentials drug effects, Membrane Potentials physiology, Rats, Rats, Wistar, Reactive Oxygen Species, Alanine analogs & derivatives, Anti-Inflammatory Agents, Non-Steroidal adverse effects, Anti-Ulcer Agents pharmacology, Gastric Mucosa cytology, Gastric Mucosa pathology, Indomethacin adverse effects, Mitochondria drug effects, Mitochondria pathology, Quinolones pharmacology
- Abstract
Nonsteroidal antiinflammatory drugs (NSAIDs) cause complications such as gastrointestinal injury. NSAIDs were recently reported to cause mitochondrial injury: to dissipate the mitochondrial transmembrane potential (MTP), and to induce mitochondrial permeability transition pore (PTP), which liberates cytochrome c. This enzyme generates reactive oxygen species (ROS) thereby triggers caspase cascade and cellular lipid peroxidation, resulting in cellular apoptosis. However, the mechanism of this NSAID-induced MTP's role in cellular apoptosis remains unknown. Rebamipide, an antiulcer drug, is reported to scavenge ROS and to show the protective effects on indomethacin-induced tissue peroxidations. Since cytochrome c and its generation of ROS are involved in indomethacin-induced cellular apoptosis, rebamipide may attenuate mitochondrial damage. The aim of this study was to elucidate whether indomethacin induces both the MTP decrease and cellular apoptosis, and the effect of rebamipide on these phenomena. We examined the effect of rebamipide on 1) MTP change, 2) lipid peroxidation, 3) apoptosis, and 4) caspase activation using gastric mucosal epithelial cell-line treated with indomethacin. With a specially designed fluorescence analyzing microscope system, MTP change, cellular lipid peroxidation, and cellular apoptosis were investigated with the small star, filled following fluorescent dyes, MitoRed, DPPP, and Hoechst 33,258, respectively. Indomethacin treatment decreased MTP but increased both cellular lipid peroxidation and cellular apoptosis via caspase 3 and 9 activation. Rebamipide clearly inhibited these phenomena {in vitro}. We demonstrated that fluorescent dyes such as MitoRed, DPPP, and Hoechst 33,258 are useful indicators for detecting oxidative cellular injuries in living cells. Rebamipide exerts a protective effect on mitochondrial membrane stability in gastric epithelial cells.
- Published
- 2005
- Full Text
- View/download PDF
50. Molecular characterization of del(8)(p23.1p23.1) in a case of congenital diaphragmatic hernia.
- Author
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Shimokawa O, Miyake N, Yoshimura T, Sosonkina N, Harada N, Mizuguchi T, Kondoh S, Kishino T, Ohta T, Remco V, Takashima T, Kinoshita A, Yoshiura K, Niikawa N, and Matsumoto N
- Subjects
- Adult, Chromosome Banding, Fatal Outcome, Genome, Human, Haplotypes, Hernias, Diaphragmatic, Congenital, Humans, In Situ Hybridization, Fluorescence, Infant, Newborn, Karyotyping, Male, Microsatellite Repeats genetics, Nucleic Acid Hybridization methods, Polymorphism, Genetic, Chromosome Deletion, Chromosomes, Human, Pair 8 genetics, Hernia, Diaphragmatic genetics
- Abstract
A 36-week-old fetus was referred to the medical center because of his cystic mass and fluid in left thoracic cavity, and was delivered by cesarean section to manage neonatal problems at 37 weeks of gestation. Emergent surgical repair of the left diaphragmatic hernia was performed, but severe hypoxia persisted, and he expired on the following day. Chromosome analysis of cultured amniotic fluid cells indicated 46,XY,del(8)(p23.1p23.1). This is the fourth case of 8p23.1 deletion associated with diaphragmatic hernia. Microarray comparative genomic hybridization analysis using DNA of cultured amniotic fluid cells showed that six clones were deleted, which were mapped to the region between two low copy repeats (LCRs) at 8p23.1 previously described. Microsatellite analysis revealed that the deletion was of paternal origin, and his parents did not carry 8p23.1 polymorphic inversion. These data strongly suggested that the 8p23.1 interstitial deletion should have arisen through a different mechanism from that of inv dup del(8p) whose structural abnormality is always of maternal origin and accompanies heterozygous 8p23.1 polymorphic inversion in mother., (Copyright (c) 2005 Wiley-Liss, Inc.)
- Published
- 2005
- Full Text
- View/download PDF
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