46 results on '"Shen, Yongmei"'
Search Results
2. TFEB/LAMP2 contributes to PM0.2-induced autophagy-lysosome dysfunction and alpha-synuclein dysregulation in astrocytes
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Li, Ben, Liu, Ting, Shen, Yongmei, Qin, Jiangnan, Chang, Xiaohan, Wu, Meiqiong, Guo, Jianquan, Liu, Liangpo, Wei, Cailing, Lyu, Yi, Tian, Fengjie, Yin, Jinzhu, Wang, Tong, Zhang, Wenping, and Qiu, Yulan
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- 2024
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3. Unraveling the causal genes and transcriptomic determinants of human telomere length
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Chang, Ying, Zhou, Yao, Zhou, Junrui, Li, Wen, Cao, Jiasong, Jing, Yaqing, Zhang, Shan, Shen, Yongmei, Lin, Qimei, Fan, Xutong, Yang, Hongxi, Dong, Xiaobao, Zhang, Shijie, Yi, Xianfu, Shuai, Ling, Shi, Lei, Liu, Zhe, Yang, Jie, Ma, Xin, Hao, Jihui, Chen, Kexin, Li, Mulin Jun, Wang, Feng, and Huang, Dandan
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- 2023
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4. YAP-mediated trophoblast dysfunction: the common pathway underlying pregnancy complications
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Lin, Qimei, Cao, Jiasong, Yu, Jing, Zhu, Yu, Shen, Yongmei, Wang, Shuqi, Wang, Yixin, Liu, Zhen, and Chang, Ying
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- 2023
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5. Ento-A alleviates DSS-induced experimental colitis in mice by remolding intestinal microbiota to regulate SCFAs metabolism and the Th17 signaling pathway
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Zhao, Hairong, Wang, Qian, Zhao, Jie, Wang, Dexiao, Liu, Heng, Gao, Pengfei, Shen, Yongmei, Wu, Taoqing, Wu, Xiumei, Zhao, Yu, and Zhang, Chenggui
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- 2024
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6. Association of urinary metal levels with metabolic syndrome in coal workers
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Li, Ben, Zhang, Qianwen, Chang, Xiaohan, Shen, Yongmei, Liu, Ting, Liang, Xiaomin, Gao, Qian, Liu, Liangpo, Qiu, Yulan, Yan, Xiaoyan, Huang, Jianjun, Wang, Tong, and Yin, Jinzhu
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- 2023
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7. Guizhi Shaoyao Zhimu granules attenuate bone destruction in mice with collagen-induced arthritis by promoting mitophagy of osteoclast precursors to inhibit osteoclastogenesis
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Yao, Huan, Xiang, Li, Huang, Yucheng, Tan, Jin, Shen, Yongmei, Li, Fangqiong, Geng, Funeng, Liu, Weiwei, Li, Xueping, and Gao, Yongxiang
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- 2023
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8. The role of reactive astrocytes in neurotoxicity induced by ultrafine particulate matter
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Li, Ben, Chang, Xiaohan, Liang, Xiaomin, Liu, Ting, Shen, Yongmei, Zhang, Qianwen, Yang, Xiaohui, Lyu, Yi, Liu, Liangpo, Guo, Jianquan, Wu, Meiqiong, Gao, Yi, Yan, Xiaoyan, Wang, Tong, Zhang, WenPing, Qiu, Yulan, and Zheng, JinPing
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- 2023
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9. Baicalin alleviates adriamycin-induced focal segmental glomerulosclerosis and proteinuria by inhibiting the Notch1-Snail axis mediated podocyte EMT
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Dou, Yitian, Shang, Yichun, Shen, Yongmei, Qu, Jingtian, Liu, Chunliu, and Cao, Jiasong
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- 2020
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10. Aromatase-induced endogenous estrogen promotes tumour metastasis through estrogen receptor-α/matrix metalloproteinase 12 axis activation in castration-resistant prostate cancer
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Liang, Zhixian, Cao, Jiasong, Tian, Lei, Shen, Yongmei, Yang, Xu, Lin, Qimei, Zhang, Ran, Liu, Haitao, Du, Xiaoling, Shi, Jiandang, and Zhang, Ju
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- 2019
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11. Mechanistic evaluation of gastroprotective effects of Kangfuxin on ethanol-induced gastric ulcer in mice
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Shen, Yongmei, Sun, Jia, Niu, Chao, Yu, Dongdong, Chen, Zhiwei, Cong, Weitao, and Geng, Funeng
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- 2017
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12. Gastroprotective effects of Kangfuxin-against ethanol-induced gastric ulcer via attenuating oxidative stress and ER stress in mice
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Chen, Pianpian, Shen, Yongmei, Shi, Hongxue, Ma, Xiuying, Lin, Beibei, Xiao, Tong, Wu, Fenzan, Zhu, Jingjing, Li, Zhengmao, Xiao, Jian, Li, Xiaokun, Zhang, Hongyu, and Geng, Funeng
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- 2016
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13. Estrogen receptor α-NOTCH1 axis enhances basal stem-like cells and epithelial-mesenchymal transition phenotypes in prostate cancer
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Shen, Yongmei, Cao, Jiasong, Liang, Zhixian, Lin, Qimei, Wang, Jianxi, Yang, Xu, Zhang, Ran, Zong, Jiaojiao, Du, Xiaoling, Peng, Yanfei, Zhang, Ju, and Shi, Jiandang
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- 2019
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14. Association between interleukin-6 and preterm birth: a meta-analysis.
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Chang, Ying, Li, Wen, Shen, Yongmei, Li, Shanshan, and Chen, Xu
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PREMATURE labor ,AMNIOTIC liquid ,INTERLEUKIN-6 ,CONFIDENCE intervals - Abstract
Interleukin (IL)-6 is a pro-inflammatory cytokine that plays an important role in preterm birth (PTB), Several meta-analyses investigated the association between IL-6 and PTB, but definitive conclusion has not yet been achieved. This updated meta-analysis aimed to ascertain the association between IL-6 and PTB by examining IL-6 levels in both normal birth and PTB groups. Prospective cohort studies were retrieved in PubMed, Embase, and the Cochrane library from their inception until 18 February 2020. The primary outcome was the association between IL-6 and PTB, and secondary outcomes were the association between IL-6 and spontaneous PTB. Nine studies involving 1904 patients were included. Overall, IL-6 from different sample types (maternal blood, amniotic fluid and cervicovaginal fluid) was associated with PTB (standard mean difference [SMD]: 0.86, 95% confidence interval [CI]: 0.32 to 1.39, p < 0.001). Furthermore, the association was significant for IL-6 only in amniotic fluid (SMD: 1.87, 95%CI: 0.82 to 2.93, p < 0.001) and cervicovaginal fluid (SMD: 0.46, 95%CI: 0.09 to 0.84, p = 0.022), but not significant in maternal blood (SMD: −0.11, 95%CI: −0.57 to 0.34, p = 0.623). In addition, IL-6 was also associated with spontaneous PTB (SMD: 1.57, 95% CI: 0.18 to 2.95, p < 0.001). Based on the available evidence, IL-6 in amniotic fluid and cervicovaginal fluid might be useful for predicting preterm birth. Based on the available evidence IL-6 in amniotic fluid and cervicovaginal fluid might be useful for predicting preterm birth [ABSTRACT FROM AUTHOR]
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- 2023
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15. LMO2 plays differential roles in trophoblast subtypes and is associated with preeclampsia
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Chen, Yaxin, Meng, Yingying, Yu, Yanhong, Li, Wen, Shen, Yongmei, Li, Shanshan, Chang, Ying, and Sun, Wei
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- 2022
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16. Serum estradiol to testosterone ratio as a novel predictor of severe preeclampsia in the first trimester.
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Shen, Yongmei, Cao, Jiasong, Yao, Liying, Li, Shanshan, Zhao, Xiaomin, Li, Wen, Wei, Zhuo, Zhang, Lei, Wang, Jianxi, and Chang, Ying
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Preeclampsia (PE) is the most common medical complication during pregnancy and the second leading cause of maternal death worldwide. However, a better predictive model of PE remains to be explored. A total of 15 severe preeclampsia (sPE) and 75 healthy control patients were included in this study. Patient data was obtained from September 2019 to September 2021. Nuchal translucency (NT) and crown‐rump length (CRL) of the fetus were acquired by ultrasound. Maternal blood samples were collected at 11+0 to 13+6 weeks of gestation. Chemiluminescent immunoassays were used to detect serum testosterone (T) and estradiol (E2) levels. Time‐resolved fluorescence analysis was used to examine the levels of serum pregnancy‐associated plasma protein A (PAPPA) and β‐human chorionic gonadotrophin (β‐HCG) protein. The sPE group exhibited increased T levels, and decreased E2 levels and E2/T ratios from 11 to 14 weeks of gestation, compared with the control group. E2 and the E2/T ratio showed positive linear correlation with CRL in pregnant women. Body‐mass‐index (BMI), T, and E2 were determined to be the main factors that affected the occurrence of sPE at the 12‐week gestation period time point. The receiver operating characteristic (ROC) curve revealed that the AUC of the E2/T ratio was.717. The imbalanced T and E2 levels in the patients had a specific intrinsic relevance with sPE, which suggests them as novel predictors of the sPE. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Novel deoxyribonucleic acid methylation perturbations in workers exposed to vinyl chloride.
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Zhao, Xiaotian, Hao, Yan, Wang, Qian, Shen, Yongmei, Cheng, Ying, Li, Ben, Gao, Yi, Wang, Tong, and Qiu, Yulan
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DNA ,VINYL chloride ,METHYLATION ,EPHRIN receptors ,GEL electrophoresis ,DNA damage - Abstract
To explore the epigenetic mechanism of deoxyribonucleic acid (DNA) damage induced by vinyl chloride (VC), we studied the micronuclei of peripheral blood lymphocytes in 193 subjects (92 in a VC exposure group employed in a chlorine-alkali plant; 101 in a control group employed in a power plant) and selected three pairs from the subjects (exposed and control) for whole-genome bisulfite sequencing (WGBS). The results showed that the rate of micronucleus formation in the VC exposure group was higher than that of control group (6.05 ± 3.28‰ vs. 2.01 ± 1.79‰). A total of 9534 differentially methylated regions (DMRs) were identified by WGBS, of which 4816 were hypomethylated and 4718 were hypermethylated. The Kyoto encyclopedia of genes and genomes (KEGG) pathway and gene ontology (GO) analyses showed the top three KEGG pathways were cancer, neuroactive ligand-receptor interaction, and axon guidance, and the top three GO-BP pathways enriched were multicellular organismal process, developmental process, and anatomical structure development. In the most enriched DMR pathway (pathways in cancer), we found that BCL2, TJP2, TAOK1, PFKFB3, LIPI, and LIPH were hypermethylated, and the methylation levels of BNIP1 and GRPEL2 were decreased. The methylation of differentially methylated genes (DMGs) mentioned above were verified by methylation-specific PCR (MSP) and agarose gel electrophoresis (AGE) in 50 pairs of subjects, where the coincidence rate was 60–100%. In conclusion, the epigenetic perturbations of specific DMGs (BCL2, TJP2, TAOK1, PFKFB3, LIPI, LIPH, BNIP1, and GRPEL2) may be associated with DNA damage from vinyl chloride exposure. [ABSTRACT FROM AUTHOR]
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- 2022
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18. The HeyL-Aromatase Axis Promotes Cancer Stem Cell Properties by Endogenous Estrogen-Induced Autophagy in Castration-Resistant Prostate Cancer.
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Lin, Qimei, Cao, Jiasong, Du, Xiaoling, Yang, Kuo, Shen, Yongmei, Wang, Weishu, Klocker, Helmut, Shi, Jiandang, and Zhang, Ju
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CASTRATION-resistant prostate cancer ,CANCER stem cells ,ESTROGEN ,ESTRADIOL ,AUTOPHAGY ,PROSTATE cancer patients ,AROMATASE - Abstract
Treatment of patients with castration-resistant prostate cancer (CRPC) remains a major clinical challenge. We previously showed that estrogenic effects contribute to CRPC progression and are primarily caused by the increased endogenous estradiol produced via highly expressed aromatase. However, the mechanism of aromatase upregulation and its role in CRPC are poorly described. In this study, we report that HeyL is aberrantly upregulated in CRPC tissues, and its expression is positively correlated with aromatase levels. HeyL overexpression increased endogenous estradiol levels and estrogen receptor-α (ERα) transcriptional activity by upregulating CYP19A1 expression, which encodes aromatase, enhancing prostate cancer stem cell (PCSC) properties in PC3 cells. Mechanistically, HeyL bound to the CYP19A1 promoter and activated its transcription. HeyL overexpression significantly promoted bicalutamide resistance in LNCaP cells, which was reversed by the aromatase inhibitor letrozole. In PC3 cells, the HeyL-aromatase axis promoted the PCSC phenotype by upregulating autophagy-related genes, while the autophagy inhibitor chloroquine (CQ) suppressed the aromatase-induced PCSC phenotype. The activated HeyL-aromatase axis promoted PCSC autophagy via ERα-mediated estrogenic effects. Taken together, our results indicated that the HeyL-aromatase axis could increase endogenous estradiol levels and activate ERα to suppress PCSC apoptosis by promoting autophagy, which enhances the understanding of how endogenous estrogenic effects influence CRPC development. [ABSTRACT FROM AUTHOR]
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- 2022
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19. Spatiotemporal expression patterns of thymosin and its immune regulation after bacterial stimulation in American cockroach (Periplaneta americana).
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Yang, Zhen, Xie, Jiqin, Yang, Yu, Sun, Xiaohong, Jing, Jie, Shen, Yongmei, Yue, Bisong, and Zhang, Xiuyue
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AMERICAN cockroach ,THYMOSIN ,PEPTIDE hormones ,WOUND healing ,HAIR growth ,ESCHERICHIA coli ,IMMUNE response - Abstract
Thymosin is a physiologically active polypeptide hormone which has many functions involved in promoting wound healing, promoting hair growth, and accelerating tissue and organ regeneration. American cockroach (Periplaneta americana) has three subtypes thymosin (THY1, THY2, THY3) which are different splices from the same thymosin gene. Real‐time PCR was used to detect and analyze the expression differences of THY1 and THY2 in different stages, sexes, tissues and after stimulation by bacteria. Thymosins were expressed in adult, eclosion, and ootheca, and their expression levels were significantly up‐regulated during the eclosion period, showing the thymosin might be involved in the eclosion process. The expression levels of thymosins in females were higher than males, and the differences in eclosion stages were more significant (P < 0.01), indicating that they were closely related to development and female reproduction. The expressions of THY1 and THY2 in hemolymph were significantly higher (P < 0.01) than that in other tissues. The up‐regulated expression of thymosin in two immune‐related tissues (Hemolymph and adipose) after Escherichia coli stimulation further confirmed its involvement in the immune response. Our research would provide a basis for screening of novel pesticides target genes. [ABSTRACT FROM AUTHOR]
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- 2021
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20. GPR30 knockdown weakens the capacity of CAF in promoting prostate cancer cell invasion via reducing macrophage infiltration and M2 polarization.
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Zhang, Ran, Zong, Jiaojiao, Peng, Yanfei, Shi, Jiandang, Du, Xiaoling, Liu, Haitao, Shen, Yongmei, Cao, Jiasong, Jia, Bona, Liu, Feng, and Zhang, Ju
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- 2021
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21. Gastroprotective effects of Kangfuxin against water-immersion and restraint stress-induced gastric ulcer in rats: roles of antioxidation, anti-inflammation, and pro-survival.
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Lu, Shan, Wu, Daoshun, Sun, Guibo, Geng, Funeng, Shen, Yongmei, Tan, Jin, Sun, Xiaobo, and Luo, Yun
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ULCERS ,IMMOBILIZATION stress ,RATS ,DUODENAL ulcers ,PROTEIN expression ,OMEPRAZOLE ,INFLAMMATORY mediators - Abstract
Context: Kangfuxin (KFX) is widely used for the treatment of gastric and duodenal ulcer; however, more research is needed to determine the protective mechanisms of KFX in ameliorating gastric ulcer. Objective: To investigate the efficacy and potential mechanism of Kangfuxin liquid (KFX) in water-immersion and restraint stress (WIRS)-induced gastric ulcer. Materials and methods: Seventy rats were randomly divided into seven groups (n = 10) as follows: the control group (normal saline, i.g.), the model group (normal saline, i.g.), the KFX groups (2.5, 5 and 10 mL/kg, i.g.), the omeprazole group (20 mg/kg, i.p.) and Sanjiuweitai Granules group (1850 mg/kg, i.g.). The WIRS model was applied to induce stress ulcers after 7 days of drug administration. Afterwards, rats were sacrificed at 10 h induced by WIRS. Results: Pre-treatment with KFX (5,10 mL/kg) could effectively reduce the area of gastric ulcers and improve the pathological changes of ulcerated tissue. Moreover, KFX (5,10 mL/kg) increased the prostaglandin E2 (52%) and cyclooxygenase-1 (30%) levels, and improved malondialdehyde (54%), superoxide dismutase (58%), catalase (39%), and nitric oxide (11%) and TNF-α (9%), IL-6 (11%), MMP-9 (54%) and MMP-2 (53%) of ulcer tissue. Furthermore, pre-treatment with KFX dramatically increased IGF-1, PTEN, and Akt protein expression. Conclusions: Our results suggest that KFX has protective effects on WIRS-induced gastric ulcer via inflammatory reactions, oxidative stress inhibition, and pro-survival action, which were the results of activating the IGF-1/PTEN/Akt signalling pathway. Our results provide evidence of KFX for treating gastric ulcer. [ABSTRACT FROM AUTHOR]
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- 2019
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22. Population genetic structure and intraspecific genetic distance of Periplaneta americana (Blattodea: Blattidae) based on mitochondrial and nuclear DNA markers.
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Ma, Jinnan, Liu, Jinhua, Shen, Yongmei, Fan, Zhenxin, Yue, Bisong, and Zhang, Xiuyue
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AMERICAN cockroach ,NUCLEAR DNA ,MITOCHONDRIAL DNA ,GENETIC distance ,GENETIC markers ,HAPLOTYPES - Abstract
The American cockroach (Periplaneta americana) is a globally invasive pest that can cause significant economic loss and threaten human health. Although it is abundant and lives in close proximity to humans, few studies have investigated the genetic diversity of P. americana. Our study analyzed 1,053 P. americana and other Periplaneta species' samples from different locations in China and the United States. A traditional tree‐based method using 17 unique mitochondrial COI haplotypes of P. americana and 20 haplotypes of the other Periplaneta species accurately identified P. americana with a barcoding threshold of 5.1%. To identify the population genetic structure of P. americana, we investigated wingless gene and pooled them with obtained mtDNA data for a combined analysis. Although the genetic diversity of the USA group was relatively higher than the China group, the number of haplotypes and alleles of both groups was small. The analysis of molecular variance (AMOVA), intraspecific phylogeny, and haplotype networks indicated that P. americana had very little global genetic differentiation. The weak geographic genetic structure might reflect the human‐mediated dispersal of P. americana. Despite no apparent phylogeographic assignment of mtDNA and nuclear lineages was observed in both BI trees, the integrated COI sequence data identified four distinct P. americana haplotype groups, showing four ancient maternal lineages of P. americana in China and the United States. [ABSTRACT FROM AUTHOR]
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- 2019
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23. Comparative Transcriptomics Reveals the Expression Differences Between Four Developmental Stages of American Cockroach (Periplaneta americana).
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Zeng, Chenjuan, Li, Wujiao, Liao, Qi, Yan, Tingting, Wang, Kaisun, Hu, Ye, Shen, Yongmei, Price, Megan, Fan, Zhenxin, Zhang, Xiuyue, Yue, Bisong, Geng, Funeng, and Chen, Lijuan
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AMERICAN cockroach ,CHINESE medicine - Abstract
The globally distributed American cockroach (Periplaneta americana) is considered a pest, but it has been widely used in traditional Chinese medicine. In the past, the American cockroach's genome and transcriptomes were sequenced, but the differential expression transcripts between developmental stages were unavailable. We performed the de novo assembly and analysis of American cockroach transcriptomes from four developmental stages. Approximately 200 million high-quality paired-end reads were generated by using Illumina Hiseq 2000 sequencer. The assembly produced 291,250 transcripts with an average length of 714 bp. In addition, 38,052 microsatellites and 11,060,020 transposable elements were identified. Based on sequence homology, 53,262 transcripts were annotated. After calculating the expression levels of all the transcripts, we found that 13 transcripts were highly expressed in all the samples and at least two, p10 and actin-related protein 1, played important roles during development. A total of 7954 differentially expressed transcripts (DETs) were identified. The adult had the largest number of DETs when compared to other samples (4818), while the 3rd and 8th larva had the least number of DETs (1332). We performed gene enrichment analysis with the DETs, and some interesting results were detected in the different groups. For example, chitin is the major component of the insect exoskeleton, and the chitin-related genes in larvae and new molted samples had higher expression levels than in adults. In addition, the enrichment analysis detected many chitin-related pathways. Our study performed the first large-scale comparative transcriptomics between the developmental stages of American cockroach, which could provide useful gene expression data for future studies. [ABSTRACT FROM AUTHOR]
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- 2019
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24. Comparative Genomics Reveals the Genetic Mechanisms of Musk Secretion and Adaptive Immunity in Chinese Forest Musk Deer.
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Zhou, Chuang, Zhang, Wenbo, Wen, Qinchao, Bu, Ping, Gao, Jie, Wang, Guannan, Jin, Jiazheng, Song, Yinjie, Sun, Xiaohong, Zhang, Yifan, Jiang, Xue, Yu, Haoran, Peng, Changjun, Shen, Yongmei, Price, Megan, Li, Jing, Zhang, Xiuyue, Fan, Zhenxin, and Yue, Bisong
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COMPARATIVE genomics ,SECRETION ,IMMUNITY ,DEER ,MISSENSE mutation ,IMMUNE system - Abstract
The Chinese forest musk deer (Moschus berezovskii ; FMD) is an artiodactyl mammal and is both economically valuable and highly endangered. To investigate the genetic mechanisms of musk secretion and adaptive immunity in FMD, we compared its genome to nine other artiodactyl genomes. Comparative genomics demonstrated that eight positively selected genes (PSGs) in FMD were annotated in three KEGG pathways that were related to metabolic and synthetic activity of musk, similar to previous transcriptome studies. Functional enrichment analysis indicated that many PSGs were involved in the regulation of immune system processes, implying important reorganization of the immune system in FMD. FMD-specific missense mutations were found in two PSGs (MHC class II antigen DRA and ADA) that were classified as deleterious by PolyPhen-2, possibly contributing to immune adaptation to infectious diseases. Functional assessment showed that the FMD-specific mutation enhanced the ADA activity, which was likely to strengthen the immune defense against pathogenic invasion. Single nucleotide polymorphism-based inference showed the recent demographic trajectory for FMD. Our data and findings provide valuable genomic resources not only for studying the genetic mechanisms of musk secretion and adaptive immunity, but also for facilitating more effective management of the captive breeding programs for this endangered species. [ABSTRACT FROM AUTHOR]
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- 2019
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25. Ginsenoside Rg3 suppresses the proliferation of prostate cancer cell line PC3 through ROS-induced cell cycle arrest.
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Peng, Yanfei, Zhang, Ran, Yang, Xu, Zhang, Zhaiyi, Kang, Ning, Bao, Liying, Shen, Yongmei, Yan, Hao, and Zheng, Fang
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PROSTATE cancer ,CELL cycle ,CANCER cell proliferation ,CELL lines - Abstract
To investigate the potential antitumor effects of ginsenoside Rg3 in prostate cancer cells, the androgen-insensitive prostate cancer cell line PC3 was cultured and incubated with ginsenoside Rg3 in vitro. Cell number counts, cell proliferation assays and senescence-associated β-galactosidase (SA-β-gal) staining were performed to evaluate cell proliferation. The results demonstrated that ginsenoside Rg3 led to cell proliferation arrest; ginsenoside Rg3 decreased the number of cells and increased the positive SA-β-gal staining rate in PC3 cells. Cell cycle analysis by flow cytometry revealed that ginsenoside Rg3 interfered with the G1/S transition in PC3 cells. The mechanism involved in ginsenoside Rg3-induced cell proliferation arrest was then further investigated. This indicated that the level of reactive oxygen species (ROS) in PC3 cells was upregulated by ginsenoside Rg3 treatment. Furthermore, pretreatment with N-acetyl-L-cysteine, a scavenger of ROS, was able to reverse the effects on cell number and cell cycle arrest induced by ginsenoside Rg3 in PC3 cells. These results indicate that ginsenoside Rg3 exhibits anticancer effects on prostate cancer cells through ROS-mediated arrest of the cell cycle. [ABSTRACT FROM AUTHOR]
- Published
- 2019
26. Complete mitochondrial genome of Periplaneta brunnea (Blattodea: Blattidae) and phylogenetic analyses within Blattodea.
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Gong, Rongyan, Guo, Xin, Ma, Jinnan, Song, Xuhao, Shen, Yongmei, Geng, Funeng, Price, Megan, Zhang, Xiuyue, and Yue, Bisong
- Abstract
Abstract The complete mitochondrial genome (mitogenome) of Periplaneta brunnea was sequenced in this study and used to reconstruct the phylogenetic relationship of Blattodea. The circular mitogenome was 15,604 bp long and exhibited typical gene organization and order, consistent with other sequenced Periplaneta mitogenomes. The initiation codon of the P. brunnea COX1 gene was unusual in that no typical ATN or TTG start codon was found. The two longest intergenic spacer sequences found in the P. brunnea mitogenome were 21 and 17 bp long. Twenty-one base spacer had a 4 bp motif (TATT) between tRNA-Glu and tRNA-Met that conservatively displayed in 9 sequenced blattarian mitogenomes. The second spacer was between tRNA-Ser ( UCN ) and NAD1 containing a 7 bp motif (WACTTAA) that was highly conserved in 14 blattarian mitogenomes. The control region showed a relatively fixed motif present in 6 Blattidae mitogenomes, with a big stem-loop structure. Phylogenetic analyses were conducted using site-homogeneous models based on 13 protein-coding genes (PCGs) and two RNA genes. The trees derived from Bayesian inference and maximum likelihood analyses and recovered a relatively stable relationship among major lineages except for the position of Polyphagidae and inter-family relationships of Blaberidae. Analyses supported the monophyly of Blattidae, Blaberidae, Blattellidae, Polyphagidae, Dictyoptera, and the paraphyly of Blattaria. We also found Mantodea was the sister clade to (Blattaria + Isoptera), being the basal position of Dictyoptera in all topologies. Meanwhile, our results also consistently supported that Isoptera should be clustered with Blattaria of Blattodea. Graphical abstract Unlabelled Image Highlights • The complete mitogenome of P. brunnea was sequenced. • The initiation codon of the P. brunnea COX 1 gene was unusual. • Two motifs were found in intergenic spacer sequences of P. brunnea mitogenome. • The control region of P. brunnea had a big stem-loop structure. • Phylogenetic inference method and dataset had effect on the position of Polyphagidae. [ABSTRACT FROM AUTHOR]
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- 2018
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27. Prohibitin-2 negatively regulates AKT2 expression to promote prostate cancer cell migration.
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Shen, Yongmei, Gao, Yu, Yuan, Hui, Cao, Jiasong, Jia, Bona, Li, Mingming, Peng, Yanfei, Du, Xiaoling, Zhang, Ju, and Shi, Jiandang
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- 2018
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28. Chitosan-DNA nanoparticles enhanced the immunogenicity of multivalent DNA vaccination on mice against Trueperella pyogenes infection.
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Huang, Ting, Song, Xuhao, Jing, Jie, Zhao, Kelei, Shen, Yongmei, Zhang, Xiuyue, and Yue, Bisong
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CHITOSAN ,NANOPARTICLE synthesis ,IMMUNOGENETICS ,DNA vaccines ,PATHOGENIC microorganisms ,GENE delivery techniques ,THERAPEUTICS - Abstract
Background: Trueperella pyogenes is a commensal and opportunistic pathogen that normally causes mastitis, liver abscesses and pneumonia of economically important livestock. To develop efficacious and potent vaccine against T. pyogenes, chimeric gene DNA vaccines were constructed and encapsulated in chitosan nanoparticles (pPCFN-CpG-CS-NPs). Results: The pPCFN-CpG-CS-NPs consists of the plo, cbpA, fimA, and nanH gene of T. pyogenes and CpG ODN1826. It was produced with good morphology, high stability, a mean diameter of 93.58 nm, and a zeta potential of + 5.27 mV. Additionally, chitosan encapsulation was confirmed to protect the DNA plasmid from DNase I digestion. The immunofluorescence assay indicated that the four-chimeric gene could synchronously express in HEK293T cells and maintain good bioactivity. Compared to the mice immunized with the control plasmid, in vivo immunization showed that mice immunized with the pPCFN-CpG-CS-NPs had better immune responses, and release of the plasmid DNA was prolonged. Importantly, immunization with pPCFN-CpG-CS-NPs could significantly protect mice from highly virulent T. pyogenes TP7 infection. Conclusions: This study indicates that chitosan-DNA nanoparticles are potent immunization candidates against T. pyogenes infection and provides strategies for the further development of novel vaccines encapsulated in chitosan nanoparticles. [ABSTRACT FROM AUTHOR]
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- 2018
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29. Profile of microRNA in Giant Panda Blood: A Resource for Immune-Related and Novel microRNAs.
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Yang, Mingyu, Du, Lianming, Li, Wujiao, Shen, Fujun, Fan, Zhenxin, Jian, Zuoyi, Hou, Rong, Shen, Yongmei, Yue, Bisong, and Zhang, Xiuyue
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GIANT panda ,MICRORNA ,BLOOD testing ,ENDANGERED species ,MAMMAL genomes ,GENE expression in mammals ,PHYSIOLOGY - Abstract
The giant panda (Ailuropoda melanoleuca) is one of the world’s most beloved endangered mammals. Although the draft genome of this species had been assembled, little was known about the composition of its microRNAs (miRNAs) or their functional profiles. Recent studies demonstrated that changes in the expression of miRNAs are associated with immunity. In this study, miRNAs were extracted from the blood of four healthy giant pandas and sequenced by Illumina next generation sequencing technology. As determined by miRNA screening, a total of 276 conserved miRNAs and 51 novel putative miRNAs candidates were detected. After differential expression analysis, we noticed that the expressions of 7 miRNAs were significantly up-regulated in young giant pandas compared with that of adults. Moreover, 2 miRNAs were up-regulated in female giant pandas and 1 in the male individuals. Target gene prediction suggested that the miRNAs of giant panda might be relevant to the expressions of 4,602 downstream genes. Subseuqently, the predicted target genes were conducted to KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway analysis and we found that these genes were mainly involved in host immunity, including the Ras signaling pathway, the PI3K-Akt signaling pathway, and the MAPK signaling pathway. In conclusion, our results provide the first miRNA profiles of giant panda blood, and the predicted functional analyses may open an avenue for further study of giant panda immunity. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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30. Study on biodistribution and radioimmunoimaging of (131)iodine-labeled monoclonal antibody D-D3 against progastrin-releasing peptide31-98 in tumor-bearing mouse.
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Liu Z, Zhou X, Shi Y, Du S, Yang Y, Tang J, Shen Y, Liu, Zengli, Zhou, Xiaolin, Shi, Yizhen, Du, Shouying, Yang, Yi, Tang, Jun, and Shen, Yongmei
- Published
- 2011
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31. Cloning, Expression and Effects of P. americana Thymosin on Wound Healing.
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Jing, Jie, Sun, Xiaohong, Zhou, Chuang, Zhang, Yifan, Shen, Yongmei, Zeng, Xiaomao, Yue, Bisong, and Zhang, Xiuyue
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THYMOSIN ,RECOMBINANT proteins ,AMERICAN cockroach ,BONE regeneration ,WOUND healing ,GROWTH factors ,MOLECULAR cloning ,COLLAGEN - Abstract
The American cockroach (Periplaneta americana) is a medicinal insect. Its extract is used clinically to promote wound healing and tissue regeneration, but the effective medicinal components and mechanisms are not yet clear. It has been reported that human thymosin beta 4 (Tβ4) may accelerate skin wound healing, however, the role of P. americana thymosin (Pa-THYs) is still poorly understood. In the present study, we identify and analyze the DNA sequences of Pa-THYs by bioinformatics analysis. Then we clone, express, and purify the Pa-THYs proteins and evaluate the activity of recombinant Pa-THYs proteins by cell migration and proliferation assays in NIH/3T3 cells. To elucidate the role of Pa-THYs in wound healing, a mouse model is established, and we evaluate wound contraction, histopathological parameters, and the expressions of several key growth factors after Pa-THYs treatment. Our results showed that three THY variants were formed by skipping splicing of exons. Pa-THYs could promote fibroblast migration, but have no effect on fibroblast proliferation. In wound repair, Pa-THYs proteins could effectively promote wound healing through stimulating dermal tissue regeneration, angiogenesis, and collagen deposition. On the molecular mechanism, Pa-THYs also stimulated the expression of several key growth factors to promote wound healing. The data suggest that Pa-THYs could be a potential drug for promoting wound repair. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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32. Genome-wide mining of perfect microsatellites and tetranucleotide orthologous microsatellites estimates in six primate species.
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Xu, Yongtao, Li, Wujiao, Hu, Zongxiu, Zeng, Tao, Shen, Yongmei, Liu, Sanxu, Zhang, Xiuyue, Li, Jing, and Yue, Bisong
- Subjects
- *
NUCLEOTIDE sequencing , *SINGLE nucleotide polymorphisms , *GENETIC regulation , *GENETIC engineering , *RIBOSOMAL DNA - Abstract
Advancement in genome sequencing and in silico mining tools have provided new opportunities for comparative primate genomics of microsatellites. The SSRs (simple sequence repeats) numbers were not correlated with the genome size (Pearson, r = 0.310, p = 0.550), and were positively correlated with the total length of SSRs (Pearson, r = 0.992, p = 0.00). A total of 224,289 tetranucleotide orthologous microsatellites families and 367 single-copy orthologous SSRs loci were found in six primate species by homologous alignment. The inner mutation types of single-copy orthologous SSRs loci included the copy number variance, point mutation, and chromosomal translocation. The accumulated repeat times and average length of tetranucleotide orthologous microsatellites in Rhinopithecus roxellana , Papio anubis and Macaca mulatta were longer than Homo sapiens and Pan troglodytes , which showed the tetranucleotide orthologous SSRs loci had more repeat times and longer average length on the branches with earlier divergence time, one exception may be Microcebus murinus as a primitive monkey with a smallest morphology in Malagasy. Our conclusion indicated that single-copy tetranucleotide orthologous SSRs sequences accumulated individual mutation more slowly through time in H. sapiens and P. troglodytes than in R. roxellanae , P. anubis and M. mulatta . However, such divergence wouldn't arise uniformly in all branches of the primate tree. A comparison of genomic sequence assemblages would offer remarkable insights about comparisons and contrasts, and the evolutionary processes of the microsatellites involved in human and nonhuman primate species. [ABSTRACT FROM AUTHOR]
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- 2018
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33. Quorum-sensing molecules N-acyl homoserine lactones inhibit Trueperella pyogenes infection in mouse model.
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Huang, Ting, Song, Xuhao, Zhao, Kelei, Jing, Jie, Shen, Yongmei, Zhang, Xiuyue, and Yue, Bisong
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- *
QUORUM sensing , *LACTONES , *BOVINE mastitis , *VETERINARY medicine , *GRAM-positive bacteria , *PSEUDOMONAS aeruginosa - Abstract
Trueperella pyogenes is a gram-positive opportunistic pathogen normally causes mastitis, liver abscesses and pneumonia of economically important livestock. It has been suggested that gram-negative bacteria can suppress the growth and virulence of T. pyogenes in vitro by using the quorum-sensing (QS) signal molecules and cause the transition of predominant species. However, whether these QS signals can be used as potential anti-virulence drugs against T. pyogenes infection is unclear. In this study, the in vivo inhibitory effect N -acyl homoserine lactones (AHLs) from Escherichia coli and Pseudomonas aeruginosa on T. pyogenes was tested by using mouse model. Mice were first peritoneally infected with T. pyogenes followed by intravenous injection of N -Octanoyl-DL-homoserine lactone (C8HSL) or N -(3-oxododecanoyl) homoserine- l -lactone (C12HSL). The results showed that C8HSL and C12HSL significantly reduced bacterial load and increased the survival rate of mice against T. pyogenes challenge. Additionally, the treatment of AHLs promoted the secretion of IL-1β, IL-6, IL-8 and TNF-α in mouse peritoneal fluid, and significantly decreased the expression levels of virulence genes of residual T. pyogenes . Importantly, murine macrophages rapidly phagocytosed bacteria when they were treated with AHLs compared to untreated cells. Collectively, our findings provide a major advance in understanding the inhibitory effect of AHLs in vivo and a promise for developing new clinical or veterinary treatments of T. pyogenes -related infection. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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34. Identification and characterization of microRNAs in American cockroach (Periplaneta americana).
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Yang, Qiao, Bao, Zheng, Yang, Mingyu, Shen, Yongmei, Zhang, Xiuyue, Yue, Bisong, Meng, Yang, and Fan, Zhenxin
- Subjects
- *
AMERICAN cockroach , *GENETIC regulation , *NON-coding RNA , *NUCLEOTIDE sequence , *MICRORNA - Abstract
• A total of 134 novel and 35 known miRNAs were identified in the American cockroach. • MiR-1000 and miR-932 may be involved in the morphogenesis and cognition, respectively. • MiRNAs still played an important role in late post-embryonic stages in holo-metabolous insects. The American cockroach (Periplaneta americana), which is one of the most ancient insects in the world, is characterized by incomplete metamorphosis. So far, no one has studied the microRNA profile of P. americana and the changes in the expression of microRNAs on different developmental stages. In this study, we sequenced the small RNAs (sRNA) of four samples at four post-embryonic developmental stages. A total of 35 conserved known mature miRNAs and 134 novel mature miRNAs were identified. After differential expression analysis, we noticed there were more miRNA expressed differentially during early post-embryonic stages. We also found about one-third of known miRNAs were significantly dynamic. After a cross-species comparative analysis, we identified two miRNAs (miR-1000 and miR-932) that may be important for morphogenesis, olfactory, learning, and memory. In addition, unlike hetero-metabolous insects, miRNAs still played an important role in late post-embryonic stages in holo-metabolous insects. In conclusion, our results underline the significance of miRNA expression in post-embryonic developmental stages of the American cockroach and push forward the understanding of gene expression modulation by miRNAs in cockroach. This would also contribute to the study of gene expression regulation by miRNAs during metamorphosis development. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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35. Discovery of indole analogues from Periplaneta americana extract and their activities on cell proliferation and recovery of ulcerative colitis in mice.
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Xie Y, Liang S, Zhang Y, Wu T, Shen Y, Yao S, and Li J
- Abstract
Background: As an important medicinal insect, Periplaneta americana (PA) has been applied for the treatment of wounds, burns, and ulcers with fewer side effects and a reduced recurrence rate, which provides great potential for developing new drugs based on its active constituents. Materials and methods: The main chromatographic peaks determined by high performance liquid chromatography (HPLC) in the PA concentrated ethanol-extract liquid (PACEL) were separated, purified, and identified by semi-preparative LC, mass spectrum, and
1 H NMR spectroscopic analysis. The biological activities of the identified compounds were investigated by methylthiazolyldiphenyl-tetrazolium bromide (MTT) method based on in vitro human skin fibroblasts (HSF) and in vivo experiments based on dextran sulfate sodium (DSS)-induced ulcerative colitis (UC) mouse model. Furthermore, RT-qPCR of six genes related to inflammation or intestinal epithelial cell proliferation was employed to investigate the molecular mechanism of the indole analogues recovering UC in mice. Results: Five indole analogues were purified and identified from PACEL, including tryptophan (Trp), tryptamine (pa01), 1,2,3,4-tetrahydrogen-β-carboline-3-carboxylic acid (pa02), (1S, 3S)-1-methyl-1,2,3,4-tetrahydrogen-β-carboline-3-carboxylic acid (pa03), and (1R, 3S)-1-methyl-1,2,3,4-tetrahydrogen-β-carboline-3-carboxylic acid (pa04), among which the pa02 and pa04 were reported in PA for the first time. In vitro and in vivo experiments showed that PACEL, Trp, and pa02 had promoting HSF proliferation activity and intragastric administration of them could alleviate symptoms of weight loss and colon length shortening in the UC mice. Although recovery activity of the compound pa01 on the colon length was not as obvious as other compounds, it showed anti-inflammatory activity in histological analysis. In addition, The RT-qPCR results indicated that the three indole analogues could alleviate DSS-induced intestinal inflammation in mice by inhibiting pro-inflammatory cytokines ( MMP7 , IL1α ) and down-regulating BMP8B expression. Conclusion: This study reported the isolation, purification, structure identification, and biological activity of the active indole analogues in PACEL. It was found for the first time that the PA extract contained many indole analogues and Trp, which exhibited good proliferation activity on HSF fibroblasts as well as anti-UC activity in mice. These indole analogues probably are important components related to the pharmacological activity in PA., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Xie, Liang, Zhang, Wu, Shen, Yao and Li.)- Published
- 2023
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36. Kangfuxin alleviates ulcerative colitis in rats by inhibiting NF-κB p65 activation and regulating T lymphocyte subsets.
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He M, Yu WX, Shen Y, Zhang JN, Ni LL, Li Y, Liu H, Zhao Y, Zhao HR, and Zhang CG
- Abstract
Objectives: Ulcerative colitis (UC) remains an enduring, idiopathic inflammatory bowel disease marked by persistent mucosal inflammation initiating from the rectum and extending in a proximal direction. An ethanol extract of Periplaneta americana L., namely Kangfuxin (KFX), has a significant historical presence in Traditional Chinese Medicine and has been broadly utilized in clinical practice for the treatment of injury. Here, we aimed to determine the effect of KFX on 2,4,6-trinitro'benzene sulfonic acid (TNBS)-induced UC in Sprague-Dawley rats., Materials and Methods: We established the UC model by TNBS/ethanol method. Then, the rats were subject to KFX (50, 100, 200 mg/kg/day) for 2 weeks by intragastric gavage. The body weight, disease activity index (DAI), colonic mucosal injury index (CMDI), and histopathological score were evaluated. The colonic tissue interleukin (IL)-1β, IL-6, tumor necrosis factor-α (TNF-α), IL-10, transforming growth factor-1 (TGF-β1), and epidermal growth factor (EGF) were determined by Elisa. To study T-lymphocyte subsets, flow cytometry was performed. In addition, the expression level of NF-κB p65 was evaluated by immunohistochemistry and western blot analysis., Results: Compared with the TNBS-triggered colitis rats, the treatment of rats with KFX significantly increased the body weight, and decreased DAI, CMDI, and histopathological score. Also, KFX elicited a reduction in the secretion of colonic pro-inflammatory cytokines, namely IL-1β, IL-6, and TNF-α, concomitant with up-regulation of IL-10, TGF-β1, and EGF levels. Upon KFX treatment, the CD3+CD4+/CD3+CD8+ ratio in the spleen decreased, while the CD3+CD8+ subset and the CD3+CD4+CD25+/CD3+CD4+ ratio demonstrated an increase. In addition, the expression of NF-κB p65 in the colon was decreased., Conclusion: KFX effectively suppresses TNBS-induced colitis by inhibiting the activation of NF-κB p65 and regulating the ratio of CD4+/CD8+., Competing Interests: None.
- Published
- 2023
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37. Improved genome assembly provides new insights into the environmental adaptation of the American cockroach, Periplaneta americana.
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Zheng X, Wang L, Liu Y, Yang Z, Li F, Yan L, Shen Y, Yue B, and Zhou C
- Subjects
- Animals, Allergens metabolism, Genome, High-Throughput Nucleotide Sequencing, Sequence Analysis, DNA, Periplaneta metabolism, Receptors, Odorant genetics
- Abstract
The synanthropic pest and a model organism for entomological research, American cockroach, Periplaneta americana (Linnaeus), can survive in unfavorable environments for humans. To investigate the genetic mechanisms of success in environmental adaptation of P. americana, we de novo reassembled its whole genome based on next-generation sequencing and PacBio sequencing. The final genome reassembly consisted of approximately 3.34 Gb with scaffold N50 of 465.51 Kb. The completeness (95.4%) of the complete genome was evaluated with single-copy orthologous genes using BUSCO. We identified 18,618 protein-coding genes, 16,443 (88.32%) of which were well supported by public protein databases. We identified 482.04 Mb (approximately 14.45%) repeat elements, 1,385,093 perfect microsatellites simple sequence repeats in P. americana genome, which was higher than other four Blattaria insects. Comparative genomics analysis revealed obvious expansion in the gene families associated with chemoreception (olfactory receptors, gustatory receptors, ionotropic glutamate receptors, chemosensory protein, and sensory neuron membrane protein), which provided the necessary information for functional characterization of the chemosensory receptors of P. americana, with potential for new or refined applications of semiochemicals-based control of this pest insect. Similarly, gene families (cytochrome P450s, carboxyl/choline esterases, and UDP-glycosyl-transferases) encoding receptors for bitter or toxic substances and detoxification enzymes were obviously expanded in P. americana, enabling its ability to detect and detoxify many toxins. Enrichment analysis of positively selected genes in P. americana revealed items associated with metabolic process and catalytic activity, which possibly contributed to the pesticide resistance of P. americana. We also analyzed the homologs to antimicrobial peptide genes reported in the Drosophila genome, and identified two attacins and seven defensins in P. americana. Our data and findings will substantially facilitate molecular studies in P. americana, including elucidation of detoxification mechanisms of xenobiotic, as well as development of new pest management strategies for the control of pests like P. americana., (© 2022 Wiley Periodicals LLC.)
- Published
- 2022
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38. Study on the Mechanism of Periplaneta americana Extract to Accelerate Wound Healing after Diabetic Anal Fistula Operation Based on Network Pharmacology.
- Author
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Wang F, Li S, Ma L, Geng Y, Shen Y, and Zeng J
- Abstract
Objective: Using network pharmacology research methods to explore the healing mechanism of American cockroach extract to accelerate wound healing after diabetic anal fistula surgery., Method: The main chemical constituents of extracts from Periplaneta americana were collected by literature retrieval. Chemical composition and targets related to diabetic anal fistula wound could be predicted based on PubChem, Swiss Target Prediction, OMIM, and GeneCards databases, and the putative targets of Periplaneta americana extraction (PAE) for diabetic anal fistula wound were obtained by Venn diagram. These common targets were predicted using the String database for protein-protein interaction (PPI) network and then screening key genes through Cytohubba. Meanwhile, the above targets were analyzed using the DAVID database for gene ontology (GO) enrichment analyses and the Kyoto Encyclopedia of Genes and Genomes (KEGG) path enrichment analyses., Results: A total of 12 chemical components of PAE were obtained by literature retrieval, and 61 therapeutic targets that may accelerate the healing of diabetic anal fistula wounds were predicted by the database. According to PPI network analysis, PAE accelerates wound healing after diabetic anal fistula surgery which may be related to proteins such as AKT1, VEGFA, EGFR, CASP3, STAT3, MAPK1, TNF, JUN, ESR1, and MMP9. GO analysis results show that targets of PAE to promote wound healing were mainly involved in biological processes such as cell proliferation, macrophage differentiation, angiogenesis, and response to hypoxia. KEGG analysis showed that the target genes were mainly concentrated in the PI3K-Akt signaling pathway, HIF-1 signaling pathway, and estrogen signaling pathway., Conclusion: Periplaneta americana extract regulates multiple targets and multiple pathways to promote wound healing after diabetic anal fistula surgery. PI3K-Akt signaling pathway, HIF-1 signaling pathway, and sex hormone signaling pathway may be key pathways in the process of Periplaneta americana extract promoting wound healing., Competing Interests: The authors declare that they have no conflicts of interest., (Copyright © 2021 Fengfei Wang et al.)
- Published
- 2021
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39. The Role of Periplaneta americana (Blattodea: Blattidae) in Modern Versus Traditional Chinese Medicine.
- Author
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Zeng C, Liao Q, Hu Y, Shen Y, Geng F, and Chen L
- Subjects
- Animals, Drugs, Chinese Herbal therapeutic use, Humans, Materia Medica therapeutic use, Medicine, Chinese Traditional, Periplaneta
- Abstract
The purpose of this review is to elaborate the role of Periplaneta (P.) americana L. in modern and traditional Chinese medicine (TCM) and compare the use of the species in these two forms of medical treatments. From searches on Google Scholar, PubMed, and Web of Science databases, studies were identified involving TCMs with P. americana, which have a history of use over several thousand years, and demonstrate how extracts from this insect play a role in the treatment of diseases through antibacterial, antiviral, antitumor activity, and enhancement of immune function. Extracts from P. americana have not been fully developed for clinical use because the active components have not been completely purified or their molecular mechanisms thoroughly understood. The development of extraction technology in modern Chinese medicine has revealed that many extracts from P. americana are able to play an important role in the control of diseases such as cancer. Drugs such as 'Kangfuxin Solution' and 'Xinmailong Injection' are now widely used for gastrointestinal ulcers and chronic heart failure, having achieved beneficial curative effects in clinical studies. Based on this, the information from studies of P. americana in TCM and modern medicine should be combined and their respective advantages applied. This review provides an overview of the role of P. americana in modern and TCM and thus contributes to identification of further applications and area requiring drug development., (© The Author(s) 2019. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2019
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40. The draft genome sequence of forest musk deer (Moschus berezovskii).
- Author
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Fan Z, Li W, Jin J, Cui K, Yan C, Peng C, Jian Z, Bu P, Price M, Zhang X, Shen Y, Li J, Q W, and Yue B
- Subjects
- Animals, Endangered Species, Male, Molecular Sequence Annotation, Phylogeny, Whole Genome Sequencing, Deer genetics, Genome
- Abstract
Background: The forest musk deer, Moschus berezovskii, is one of seven musk deer (Moschus spp.) and is distributed in Southwest China. Akin to other musk deer, the forest musk deer has been traditionally and is currently hunted for its musk (i.e., global perfume industry). Considerable hunting pressure and habitat loss have caused significant population declines. Consequently, the Chinese government commenced captive breeding programs for musk harvesting in the 1950s. However, the prevalence of fatal diseases is considerably restricting population increases. Disease severity and extent are exacerbated by inbreeding and genetic diversity declines in captive musk deer populations. It is essential that knowledge of captive and wild forest musk deer populations' immune system and genome be gained in order to improve their physical and genetic health. We have thus sequenced the whole genome of the forest musk deer, completed the genomic assembly and annotation, and performed preliminary bioinformatic analyses., Findings: A total of 407 Gb raw reads from whole-genome sequencing were generated using the Illumina HiSeq 4000 platform. The final genome assembly is around 2.72 Gb, with a contig N50 length of 22.6 kb and a scaffold N50 length of 2.85 Mb. We identified 24,352 genes and found that 42.05% of the genome is composed of repetitive elements. We also detected 1,236 olfactory receptor genes. The genome-wide phylogenetic tree indicated that the forest musk deer was within the order Artiodactyla, and it appeared as the sister clade of four members of Bovidae. In total, 576 genes were under positive selection in the forest musk deer lineage., Conclusions: We provide the first genome sequence and gene annotation for the forest musk deer. The availability of these resources will be very useful for the conservation and captive breeding of this endangered and economically important species and for reconstructing the evolutionary history of the order Artiodactyla.
- Published
- 2018
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41. Ginsenoside Rg3 inhibits the senescence of prostate stromal cells through down-regulation of interleukin 8 expression.
- Author
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Peng Y, Zhang R, Kong L, Shen Y, Xu D, Zheng F, Liu J, Wu Q, Jia B, and Zhang J
- Abstract
Senescent stromal cells support the development of prostate cancer and are considered potential therapeutic targets. This research evaluated the regulatory effects of ginsenoside Rg3 on the senescence of prostatic stromal cells pre-incubated in medium supplemented with 0.5% fetal bovine serum. The results revealed that ginsenoside Rg3 decreased the number of stromal cells positively stained with a senescent cell marker (senescence-associated β-galactosidase). Ginsenoside Rg3 also increased the viability of stromal cells and promoted cell cycle transition from G0/G1 to S phase, as well as inhibited the carcinoma-associated fibroblast-like phenotype in prostate stromal cells, through the up-regulation of smooth muscle cell markers SM22 and smooth muscle myosin heavy chain. Conditioned medium collected from stromal cells treated with ginsenoside Rg3 exhibited an attenuated effect on the promotion of prostate cancer cell migration compared with conditioned medium from stromal cells without Rg3 treatment. Down-regulation of interleukin 8 (IL-8) in a dose- and time-dependent manner was observed in ginsenoside Rg3-treated stromal cells, and over-expression or addition of IL-8 reversed the anti-senescence role of Rg3 in prostate stromal cells. Furthermore, ginsenoside Rg3 down-regulated IL-8 expression by decreasing the reactive oxygen species level in prostatic stromal cells and reducing the transcriptional activity of IL-8 promoter by damping the transcription factors C/EBP β and p65 binding to IL-8 promoter. Our research revealed that ginsenoside Rg3 was able to inhibit prostate stromal cell senescence by down-regulating IL-8 expression. The results suggest a potential value for ginsenoside Rg3 in prostate cancer treatment through the targeting of pro-carcinogenic senescent stromal cells., Competing Interests: CONFLICTS OF INTEREST The authors declare that they have no competing interests.
- Published
- 2017
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42. GPR30 Promotes Prostate Stromal Cell Activation via Suppression of ERα Expression and Its Downstream Signaling Pathway.
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Jia B, Gao Y, Li M, Shi J, Peng Y, Du X, Klocker H, Sampson N, Shen Y, Liu M, and Zhang J
- Subjects
- Cells, Cultured, Down-Regulation genetics, Fibroblasts physiology, Humans, Male, Neoplastic Stem Cells metabolism, Prostate cytology, Prostate pathology, Receptors, Estrogen genetics, Receptors, G-Protein-Coupled genetics, Signal Transduction genetics, Cell Transformation, Neoplastic genetics, Estrogen Receptor alpha genetics, Estrogen Receptor alpha metabolism, Neoplastic Stem Cells pathology, Prostate physiology, Receptors, Estrogen physiology, Receptors, G-Protein-Coupled physiology, Stromal Cells physiology
- Abstract
Cancer-associated fibroblasts (CAFs) play a vital role in malignant transformation and progression of prostate cancer (PCa), and accumulating evidence suggests an enhancing effect of estrogens on PCa. The present study aimed to investigate the possible origin of prostate CAFs and the effects of estrogen receptors, G protein-coupled receptor 30 (GPR30) and estrogen receptor (ER)-α, on stromal cell activation. High expression of fibroblast activation protein (FAP), CD44, and nonmuscle myosin heavy chain B (SMemb) accompanied by low expression of smooth muscle differentiation markers was found in the stromal cells of PCa tissues and in cultured human prostate CAFs. Additionally, SMemb expression, which is coupled to cell phenotype switching and proliferation, was coexpressed with FAP, a marker of activated stromal cells, and with the stem cell marker CD44 in the stromal cells of PCa tissue. Prostate CAFs showed high GPR30 and low ERα expression. Moreover, GPR30 was coexpressed with FAP, CD44, and SMemb. Furthermore, the study demonstrated that the overexpression of GPR30 or the knockdown of ERα in prostate stromal cells induced the up-regulation of FAP, CD44, Smemb, and the down-regulation of smooth muscle markers. The conditioned medium from these cells promoted the proliferation and migration of LNCaP and PC3 PCa cells. GPR30 knockdown or ERα overexpression showed opposite effects. Finally, we present a novel mechanism whereby GPR30 limits ERα expression via inhibition of the cAMP/protein kinase A signaling pathway. These results suggest that stem-like cells within the stroma are a possible source of prostate CAFs and that the negative regulation of ERα expression by GPR30 is centrally involved in prostate stromal cell activation.
- Published
- 2016
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43. Growth inhibition and apoptosis of human B-cell lymphoma in vitro and in vivo by Bcl-2 short hairpin RNA.
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Liu Y, Shen Y, Qin C, Shi Y, Rong G, and Yu X
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- Animals, Blotting, Western, Flow Cytometry, Genetic Vectors, Humans, Immunoenzyme Techniques, In Vitro Techniques, Lymphoma, B-Cell genetics, Lymphoma, B-Cell metabolism, Male, Mice, Mice, Inbred BALB C, Mice, Nude, Proto-Oncogene Proteins c-bcl-2 genetics, Proto-Oncogene Proteins c-bcl-2 metabolism, RNA, Messenger genetics, Real-Time Polymerase Chain Reaction, Reverse Transcriptase Polymerase Chain Reaction, Tumor Cells, Cultured, Apoptosis, Cell Proliferation, Lymphoma, B-Cell pathology, Proto-Oncogene Proteins c-bcl-2 antagonists & inhibitors, RNA, Small Interfering genetics
- Abstract
Bcl-2 is overexpressed in various types of human tumors, including Burkitt's lymphoma, and it is involved in tumorigenesis and chemoresistance, therefore, it is regarded as a potential target of gene therapy. In this study, RNA interference using short hairpin RNA (shRNA)-mediated RNA interference was introduced into Burkitt's lymphoma Raji cells to validate its effects on Bcl-2 expression and cell proliferation in vitro and in vivo. We constructed two types of Bcl-2 shRNA plasmid (pGenesil-1-Bcl-2-1 and pGenesil-1-Bcl-2-2) and negative control shRNA plasmid (pGenesil-1-NC) and stably transfected them into Raji cells. The expression levels of Bcl-2 mRNA and protein were assayed by RT-PCR, flow cytometry and western blotting. Cell proliferation was determined by cell count assay. The antitumor activities and apoptosis of the two types of Bcl-2 shRNA plasmid were evaluated in BALB/c nude mice bearing Burkitt's lymphoma inoculated with Raji cells. The results showed that the expression levels of Bcl-2 mRNA and protein decreased, compared with either the pGenecil-1-NC or the untransfected cell group (P<0.05). The cell proliferation assay showed that Bcl-2 shRNA significantly inhibited the growth of Raji cells (P<0.01). Furthermore, the tumor growth of the Bcl-2 shRNA cell group was dramatically lower and smaller than that of the negative control or untransfected cell group (P<0.01). Bcl-2 protein expression in the untransfected and the pGenesil-1-NC group were markedly higher than that of the pGenesil-1-Bcl-2-1 and the pGenesil-1-Bcl-2 group by immunohistochemistry (both P<0.01) and the results using transmission electron microscopy showed that Bcl-2 shRNA significantly induced Raji cell apoptosis. Additionally, the inhibition effect of pGenesil-1-Bcl-2-1 was better than that of pGenesil-1-Bcl-2-2. It has been suggested that vector-based Bcl-2 shRNA could effectively reduce the expression of Bcl-2 and induce apoptosis and growth inhibition of Burkitt's lymphoma Raji cells. Vector-based Bcl-2 shRNA could be a potential gene therapeutic strategy against human Burkitt's lymphoma.
- Published
- 2013
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44. Generation and selection of immunized Fab phage display library against human B cell lymphoma.
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Shen Y, Yang X, Dong N, Xie X, Bai X, and Shi Y
- Subjects
- Amino Acid Sequence, Animals, Blotting, Western, Cell Line, Tumor, Electrophoresis, Polyacrylamide Gel, Enzyme-Linked Immunosorbent Assay, Genetic Vectors genetics, Humans, Immune Sera analysis, Immune Sera immunology, Immunization, Immunoglobulin Fab Fragments immunology, Immunoglobulin kappa-Chains genetics, Immunoglobulin kappa-Chains immunology, Lymphoma, B-Cell immunology, Lymphoma, B-Cell pathology, Mice, Mice, Inbred BALB C, Models, Genetic, Molecular Sequence Data, Reverse Transcriptase Polymerase Chain Reaction, Sequence Homology, Amino Acid, Immunoglobulin Fab Fragments genetics, Peptide Library
- Abstract
The approval of using monoclonal antibodies as a targeted therapy in the management of patients with B cell lymphoma has led to new treatment options for this group of patients. Production of monoclonal antibodies by the traditional hybridoma technology is costly, and the resulting murine antibodies often have the disadvantage of triggering human anti-mouse antibody (HAMA) response. Therefore recombinant Fab antibodies generated by the phage display technology can be a suitable alternative in managing B cell lymphoma. In this study, we extracted total RNA from spleen cells of BALB/c mice immunized with human B lymphoma cells, and used RT-PCR to amplify cDNAs coding for the kappa light chains and Fd fragments of heavy chains. After appropriate restriction digests, these cDNA fragments were successively inserted into the phagemid vector pComb3H-SS to construct an immunized Fab phage display library. The diversity of the constructed library was approximately 1.94x10(7). Following five rounds of biopanning, soluble Fab antibodies were produced from positive clones identified by ELISA. From eight positive clones, FabC06, FabC21, FabC43 and FabC59 were selected for sequence analysis. At the level of amino acid sequences, the variable heavy domains (V(H)) and variable light domains (V(L)) were found to share 88-92% and 89-94% homology with sequences coded by the corresponding murine germline genes respectively. Furthermore, reactivity with membrane proteins of the B cell lymphoma was demonstrated by immunohistochemistry and western blotting. These immunized Fab antibodies may provide a valuable tool for further study of B cell lymphoma and could also contribute to the improvement of disease therapy.
- Published
- 2007
- Full Text
- View/download PDF
45. Clinical, cytogenetic and dual-color FISH studies on five cases of myelodysplastic syndrome or acute myeloid leukemia patients with 1;7 translocation.
- Author
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Shen Y, Xue Y, Li J, Pan J, and Wu Y
- Subjects
- Adult, Female, Humans, Male, Chromosomes, Human, Pair 1, Chromosomes, Human, Pair 7, In Situ Hybridization, Fluorescence, Leukemia, Myeloid, Acute genetics, Myelodysplastic Syndromes genetics, Translocation, Genetic
- Abstract
Objective: To study the clinical and cytogenetic characteristics of four patients with myelodysplastic syndrome (MDS) and one with acute myeloid leukemia experiencing t (1;7)., Methods: Five patients seen in our hospital from 1992 to 2001 were diagnosed as MDS and acute myelocytic leukemia (AML) according to the French-American-British (FAB) criteria. Chromosomes were prepared using the direct method as well as 24-hour unstimulated cultures of fresh heparinized bone marrow for each subject, while R-banding was used to analyze karyotypes. Dual-color fluorescence in situ hybridization (FISH) using SpectrumRed and SpectrumGreen directly labeled chromosome 1-specific alpha-satellite DNA probe (red) and chromosome 7- specific alpha-satellite DNA probe (green) was performed for three cases., Results: Of the five patients, three had 1;7 translocation due to a long history of exposure to benzene. In three cases, dual-color FISH resulted in three red signals and two green ones, in which one red signal adjoining one green signal in 27.6%, 84% and 18.5% metaphases, respectively., Conclusions: Exposure to benzene may be the cause for Chinese MDS and AML patients with t (1;7) translocation. The result of dual-color FISH convincingly confirmed that the centromere of the derivative chromosome 7p/1q resulting from 1;7 translocation was made up of centromeres from both chromosomes 1 and 7.
- Published
- 2003
46. Pentasomy 8q resulting from duplication of isochromosome 8q in chronic myelomonocytic leukemia.
- Author
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Shen Y, Xue Y, Li J, Guo Y, Wu Y, and Pan J
- Subjects
- Cytogenetic Analysis, Fatal Outcome, Gene Duplication, Humans, Hydroxyurea administration & dosage, Leukemia, Myelomonocytic, Chronic etiology, Male, Mercaptopurine administration & dosage, Middle Aged, Aneuploidy, Chromosomes, Human, Pair 8, Isochromosomes, Leukemia, Myelomonocytic, Chronic genetics
- Abstract
We report an interesting case of chronic myelomonocytic leukemia (CMML) with pentasomy 8q resulting from the duplication of isochromosome 8q in a 47-year-old male. His blood picture and myelogram showed CMML and the chromosome study, using R-banding and G-banding techniques, revealed a karyotype of 47,XY,-8,+i(8)(q10)x2. Dual-color fluorescence in situ hybridization (FISH) studies with a #8 centromeric probe and a locus-specific probe for C-myc gene completely confirmed the result of the conventional cytogenetic method. Reverse transcription polymerase reaction (RT-PCR) revealed no BCR/ABL fusion transcript. Hydroxyurea and 6-mercaptopurine therapy did not induce a complete remission and five months later he died of exacerbation of his disease. On reviewing another two cases with pentasomy 8q in the literature, we feel that pentasomy 8q, when present as a sole anomaly, may play a specific role in leukemogenesis and in determining the clinical characteristics such as monocytic involvement and poor prognosis.
- Published
- 2002
- Full Text
- View/download PDF
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