14 results on '"Rockhill, Alexander P"'
Search Results
2. Investigating the Triple Code Model in numerical cognition using stereotactic electroencephalography.
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Rockhill, Alexander P., Tan, Hao, Lopez Ramos, Christian G., Nerison, Caleb, Shafie, Beck, Shahin, Maryam N., Fecker, Adeline, Ismail, Mostafa, Cleary, Daniel R., Collins, Kelly L., and Raslan, Ahmed M.
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RECOGNITION (Psychology) , *PARIETAL lobe , *PRINCIPAL components analysis , *MATHEMATICAL ability , *CLASSIFICATION algorithms - Abstract
The ability to conceptualize numerical quantities is an essential human trait. According to the "Triple Code Model" in numerical cognition, distinct neural substrates encode the processing of visual, auditory, and non-symbolic numerical representations. While our contemporary understanding of human number cognition has benefited greatly from advances in clinical imaging, limited studies have investigated the intracranial electrophysiological correlates of number processing. In this study, 13 subjects undergoing stereotactic electroencephalography for epilepsy participated in a number recognition task. Drawing upon postulates of the Triple Code Model, we presented subjects with numerical stimuli varying in representation type (symbolic vs. non-symbolic) and mode of stimuli delivery (visual vs. auditory). Time-frequency spectrograms were dimensionally reduced with principal component analysis and passed into a linear support vector machine classification algorithm to identify regions associated with number perception compared to inter-trial periods. Across representation formats, the highest classification accuracy was observed in the bilateral parietal lobes. Auditory (spoken and beeps) and visual (Arabic) number formats preferentially engaged the superior temporal cortices and the frontoparietal regions, respectively. The left parietal cortex was found to have the highest classification for number dots. Notably, the putamen exhibited robust classification accuracies in response to numerical stimuli. Analyses of spectral feature maps revealed that non-gamma frequency, below 30 Hz, had greater-than-chance classification value and could be potentially used to characterize format specific number representations. Taken together, our findings obtained from intracranial recordings provide further support and expand on the Triple Code Model for numerical cognition. [ABSTRACT FROM AUTHOR]
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- 2024
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3. A systematic review of focused ultrasound for psychiatric disorders: current applications, opportunities, and challenges.
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Henn, Matthew C., Smith, Haley D., Ramos, Christian G. Lopez, Shafie, Beck, Abaricia, Jefferson, Stevens, Ian, Rockhill, Alexander P., Cleary, Daniel R., and Raslan, Ahmed M.
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- 2024
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4. Stereo-EEG recordings extend known distributions of canonical movement-related oscillations.
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Rockhill, Alexander P, Mantovani, Alessandra, Stedelin, Brittany, Nerison, Caleb S, Raslan, Ahmed M, and Swann, Nicole C
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- 2023
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5. MNE-BIDS: MNE-Python + BIDS = easy dataset interaction
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Appelhoff, Stefan, Sanderson, Matthew, Brooks, Teon L, van Vliet, Marijn, Quentin, Romain, Holdgraf, Chris, Chaumon, Maximilien, Mikulan, Ezequiel, Tavabi, Kambiz, Richard Höchenberger, Welke, Dominik, Brunner, Clemens, Rockhill, Alexander P, Larson, Eric, Herbst, Sophie K, Luke, Robert, Li, Adam, Gramfort, Alexandre, and Jas, Mainak
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Brain Imaging Data Structure ,FOSS ,MEG ,iEEG ,tools ,EEG ,neuroinformatics ,ComputingMilieux_MISCELLANEOUS ,BIDS ,open-source ,MNE - Abstract
This is the poster presented at OHBM 2020 about MNE-BIDS, an open-source project within the broader MNE project that aims to organize neurophysiology data according to the BIDS specification. See the "OHBM_2020_MNE-BIDS_references.pdf" file for references and credits.
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- 2020
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6. Case Report of Dual-Site Neurostimulation and Chronic Recording of Cortico-Striatal Circuitry in a Patient With Treatment Refractory Obsessive Compulsive Disorder.
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Olsen, Sarah T., Basu, Ishita, Bilge, Mustafa Taha, Kanabar, Anish, Boggess, Matthew J., Rockhill, Alexander P., Gosai, Aishwarya K., Hahn, Emily, Peled, Noam, Ennis, Michaela, Shiff, Ilana, Fairbank-Haynes, Katherine, Salvi, Joshua D., Cusin, Cristina, Deckersbach, Thilo, Williams, Ziv, Baker, Justin T., Dougherty, Darin D., and Widge, Alik S.
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OBSESSIVE-compulsive disorder ,NEURAL stimulation ,DEEP brain stimulation ,MENTAL illness ,SYMPTOMS - Abstract
Psychiatric disorders are increasingly understood as dysfunctions of hyper- or hypoconnectivity in distributed brain circuits. A prototypical example is obsessive compulsive disorder (OCD), which has been repeatedly linked to hyper-connectivity of cortico-striatal-thalamo-cortical (CSTC) loops. Deep brain stimulation (DBS) and lesions of CSTC structures have shown promise for treating both OCD and related disorders involving over-expression of automatic/habitual behaviors. Physiologically, we propose that this CSTC hyper-connectivity may be reflected in high synchrony of neural firing between loop structures, which could be measured as coherent oscillations in the local field potential (LFP). Here we report the results from the pilot patient in an Early Feasibility study (https://clinicaltrials.gov/ct2/show/NCT03184454) in which we use the Medtronic Activa PC+ S device to simultaneously record and stimulate in the supplementary motor area (SMA) and ventral capsule/ventral striatum (VC/VS). We hypothesized that frequency-mismatched stimulation should disrupt coherence and reduce compulsive symptoms. The patient reported subjective improvement in OCD symptoms and showed evidence of improved cognitive control with the addition of cortical stimulation, but these changes were not reflected in primary rating scales specific to OCD and depression, or during blinded cortical stimulation. This subjective improvement was correlated with increased SMA and VC/VS coherence in the alpha, beta, and gamma bands, signals which persisted after correcting for stimulation artifacts. We discuss the implications of this research, and propose future directions for research in network modulation in OCD and more broadly across psychiatric disorders. [ABSTRACT FROM AUTHOR]
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- 2020
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7. Altering alpha-frequency brain oscillations with rapid analog feedback-driven neurostimulation.
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Widge, Alik S., Boggess, Matthew, Rockhill, Alexander P., Mullen, Andrew, Sheopory, Shivani, Loonis, Roman, Freeman, Daniel K., and Miller, Earl K.
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OSCILLATIONS ,NEURAL stimulation ,FEEDBACK control systems ,NEUROBEHAVIORAL disorders ,CLOSED loop systems - Abstract
Oscillations of the brain’s local field potential (LFP) may coordinate neural ensembles and brain networks. It has been difficult to causally test this model or to translate its implications into treatments, because there are few reliable ways to alter LFP oscillations. We developed a closed-loop analog circuit to enhance brain oscillations by feeding them back into cortex through phase-locked transcranial electrical stimulation. We tested the system in a rhesus macaque with chronically implanted electrode arrays, targeting 8–15 Hz (alpha) oscillations. Ten seconds of stimulation increased alpha oscillatory power for up to 1 second after stimulation offset. In contrast, open-loop stimulation decreased alpha power. There was no effect in the neighboring 15–30 Hz (beta) LFP rhythm or on a neighboring array that did not participate in closed-loop feedback. Analog closed-loop neurostimulation might thus be a useful strategy for altering brain oscillations, both for basic research and the treatment of neuro-psychiatric disease. [ABSTRACT FROM AUTHOR]
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- 2018
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8. Combination Resective or Ablative Epilepsy Surgery with Neurostimulation for Complex Epilepsy Networks: A Case Series.
- Author
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Lopez Ramos CG, Shahin MN, Shafie B, Tan H, Yamamoto E, Rockhill AP, Fecker A, Ismail M, Cleary DR, Raslan A, and Ernst LD
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Introduction: Complex epilepsy networks with multifocal onset zones that overlap with eloquent cortex may benefit from combined surgical approaches. However, limited data exist on outcomes associated with performing these therapies in tandem. In this case series, we report on 6 patients who underwent combination surgery with either resection or laser interstitial thermal therapy (LITT) and neuromodulation with responsive neurostimulation (RNS) or deep brain stimulation (DBS)., Methods: We performed a retrospective review of adult patients with medically refractory epilepsy who underwent staged combination epilepsy surgeries during the same admission at our institution. Six cases treated between 2019 and 2023 were identified. All patients underwent a presurgical work-up including invasive intracranial monitoring and underwent a combined approach with either surgical resection, LITT, RNS, or DBS. We extracted data on demographic, clinical, and surgical characteristics. The primary outcome was change in seizure frequency from baseline., Results: The mean age was 42.7 years old (4 female). All patients had at least one epileptogenic zone in the temporal lobe, two in extratemporal neocortex, two in periventricular nodular heterotopia. For the staged combination approach, 3 patients underwent LITT followed by RNS, two underwent resection and RNS, and one received LITT and DBS. The mean reduction in seizure frequency per month at last follow-up was 90%. Postoperatively, 1 patient experienced superior visual field deficits related to LITT, and another had postoperative deep vein thrombosis., Conclusion: All patients experienced at least an 83% reduction in seizures. This case series demonstrates the potential benefits of a combined surgical approach in patients with multifocal seizures and at least one lesion that can be safely resected or ablated. Future prospective studies are warranted., (© 2024 S. Karger AG, Basel.)
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- 2024
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9. The past, present, and future of the brain imaging data structure (BIDS).
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Poldrack RA, Markiewicz CJ, Appelhoff S, Ashar YK, Auer T, Baillet S, Bansal S, Beltrachini L, Benar CG, Bertazzoli G, Bhogawar S, Blair RW, Bortoletto M, Boudreau M, Brooks TL, Calhoun VD, Castelli FM, Clement P, Cohen AL, Cohen-Adad J, D'Ambrosio S, de Hollander G, de la Iglesia-Vayá M, de la Vega A, Delorme A, Devinsky O, Draschkow D, Duff EP, DuPre E, Earl E, Esteban O, Feingold FW, Flandin G, Galassi A, Gallitto G, Ganz M, Gau R, Gholam J, Ghosh SS, Giacomel A, Gillman AG, Gleeson P, Gramfort A, Guay S, Guidali G, Halchenko YO, Handwerker DA, Hardcastle N, Herholz P, Hermes D, Honey CJ, Innis RB, Ioanas HI, Jahn A, Karakuzu A, Keator DB, Kiar G, Kincses B, Laird AR, Lau JC, Lazari A, Legarreta JH, Li A, Li X, Love BC, Lu H, Marcantoni E, Maumet C, Mazzamuto G, Meisler SL, Mikkelsen M, Mutsaerts H, Nichols TE, Nikolaidis A, Nilsonne G, Niso G, Norgaard M, Okell TW, Oostenveld R, Ort E, Park PJ, Pawlik M, Pernet CR, Pestilli F, Petr J, Phillips C, Poline JB, Pollonini L, Raamana PR, Ritter P, Rizzo G, Robbins KA, Rockhill AP, Rogers C, Rokem A, Rorden C, Routier A, Saborit-Torres JM, Salo T, Schirner M, Smith RE, Spisak T, Sprenger J, Swann NC, Szinte M, Takerkart S, Thirion B, Thomas AG, Torabian S, Varoquaux G, Voytek B, Welzel J, Wilson M, Yarkoni T, and Gorgolewski KJ
- Abstract
The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a history of how the standard has developed and grown over time. We outline the principles behind the project, the mechanisms by which it has been extended, and some of the challenges being addressed as it evolves. We also discuss the lessons learned through the project, with the aim of enabling researchers in other domains to learn from the success of BIDS., Competing Interests: Gaia Rizzo is an employee of Invicro. No other authors have competing interests to declare., (© 2024 Massachusetts Institute of Technology. Published under a Creative Commons Attribution 4.0 International (CC BY 4.0) license.)
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- 2024
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10. Dynamic Visualization of Gyral and Sulcal Stereoelectroencephalographic Contacts in Humans.
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Adamek M, Rockhill AP, Ince NF, Brunner P, and Hermes D
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- Humans, Stereotaxic Techniques, Brain, Electrodes, Epilepsy diagnosis, Drug Resistant Epilepsy surgery
- Abstract
Stereoelectroencephalography (SEEG) is a neurosurgical method to survey electrophysiological activity within the brain to treat disorders such as Epilepsy. In this stereotactic approach, leads are implanted through straight trajectories to survey both cortical and sub-cortical activity.Visualizing the recorded locations covering sulcal and gyral activity while staying true to the cortical architecture is challenging due to the folded, three-dimensional nature of the human cortex.To overcome this challenge, we developed a novel visualization concept, allowing investigators to dynamically morph between the subjects' cortical reconstruction and an inflated cortex representation. This inflated view, in which gyri and sulci are viewed on a smooth surface, allows better visualization of electrodes buried within the sulcus while staying true to the underlying cortical architecture.Clinical relevance- These visualization techniques might also help guide clinical decision-making when defining seizure onset zones or resections for patients undergoing SEEG monitoring for intractable epilepsy.
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- 2023
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11. Intracranial Electrode Location and Analysis in MNE-Python.
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Rockhill AP, Larson E, Stedelin B, Mantovani A, Raslan AM, Gramfort A, and Swann NC
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- 2022
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12. pd-parser: A tool for Matching Photodiode Deflection Events to Time-Stamped Events.
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Rockhill AP, Raslan AM, and Swann NC
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Precise synchronization of events displayed on a monitor to recordings of time series data is critical for applications such as vision or psychophysics research. To achieve this, researchers often use a photodiode to convert the luminance on a monitor over time into a voltage time course, which is what is recorded. pd-parser matches photodiode deflection events to time-stamped events; it is particularly useful when the photodiode signal is corrupted or there is drift between the clock of the computer controlling the monitor and the data acquisition computer clock.
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- 2020
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13. The Neural Basis of Approach-Avoidance Conflict: A Model Based Analysis.
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Zorowitz S, Rockhill AP, Ellard KK, Link KE, Herrington T, Pizzagalli DA, Widge AS, Deckersbach T, and Dougherty DD
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- Adult, Bayes Theorem, Brain Mapping, Female, Humans, Individuality, Magnetic Resonance Imaging, Male, Models, Neurological, Reward, Avoidance Learning physiology, Brain physiology, Choice Behavior physiology, Conflict, Psychological
- Abstract
Approach-avoidance conflict arises when the drives to pursue reward and avoid harm are incompatible. Previous neuroimaging studies of approach-avoidance conflict have shown large variability in reported neuroanatomical correlates. These prior studies have generally neglected to account for potential sources of variability, such as individual differences in choice preferences and modeling of hemodynamic response during conflict. In the present study, we controlled for these limitations using a hierarchical Bayesian model (HBM). This enabled us to measure participant-specific per-trial estimates of conflict during an approach-avoidance task. We also employed a variable epoch method to identify brain structures specifically sensitive to conflict. In a sample of 28 human participants, we found that only a limited set of brain structures [inferior frontal gyrus (IFG), right dorsolateral prefrontal cortex (dlPFC), and right pre-supplementary motor area (pre-SMA)] are specifically correlated with approach-avoidance conflict. These findings suggest that controlling for previous sources of variability increases the specificity of the neuroanatomical correlates of approach-avoidance conflict., (Copyright © 2019 Zorowitz et al.)
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- 2019
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14. MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.
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Appelhoff S, Sanderson M, Brooks TL, van Vliet M, Quentin R, Holdgraf C, Chaumon M, Mikulan E, Tavabi K, Höchenberger R, Welke D, Brunner C, Rockhill AP, Larson E, Gramfort A, and Jas M
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The development of the Brain Imaging Data Structure (BIDS; Gorgolewski et al., 2016) gave the neuroscientific community a standard to organize and share data. BIDS prescribes file naming conventions and a folder structure to store data in a set of already existing file formats. Next to rules about organization of the data itself, BIDS provides standardized templates to store associated metadata in the form of Javascript Object Notation (JSON) and tab separated value (TSV) files. It thus facilitates data sharing, eases metadata querying, and enables automatic data analysis pipelines. BIDS is a rich system to curate, aggregate, and annotate neuroimaging databases.
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- 2019
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