6 results on '"Puchta, Henrike"'
Search Results
2. Poor Bone Quality is Associated With Greater Arterial Stiffness: Insights From the UK Biobank.
- Author
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Raisi‐Estabragh, Zahra, Biasiolli, Luca, Cooper, Jackie, Aung, Nay, Fung, Kenneth, Paiva, José M, Sanghvi, Mihir M, Thomson, Ross J, Curtis, Elizabeth, Paccou, Julien, Rayner, Jennifer J, Werys, Konrad, Puchta, Henrike, Thomas, Katharine E, Lee, Aaron M, Piechnik, Stefan K, Neubauer, Stefan, Munroe, Patricia B, Cooper, Cyrus, and Petersen, Steffen E
- Abstract
Osteoporosis and ischemic heart disease (IHD) represent important public health problems. Existing research suggests an association between the two conditions beyond that attributable to shared risk factors, with a potentially causal relationship. In this study, we tested the association of bone speed of sound (SOS) from quantitative heel ultrasound with (i) measures of arterial compliance from cardiovascular magnetic resonance (aortic distensibility [AD]); (ii) finger photoplethysmography (arterial stiffness index [ASI]); and (iii) incident myocardial infarction and IHD mortality in the UK Biobank cohort. We considered the potential mediating effect of a range of blood biomarkers and cardiometabolic morbidities and evaluated differential relationships by sex, menopause status, smoking, diabetes, and obesity. Furthermore, we considered whether associations with arterial compliance explained association of SOS with ischemic cardiovascular outcomes. Higher SOS was associated with lower arterial compliance by both ASI and AD for both men and women. The relationship was most consistent with ASI, likely relating to larger sample size available for this variable (n = 159,542 versus n = 18,229). There was no clear evidence of differential relationship by menopause, smoking, diabetes, or body mass index (BMI). Blood biomarkers appeared important in mediating the association for both men and women, but with different directions of effect and did not fully explain the observed effects. In fully adjusted models, higher SOS was associated with significantly lower IHD mortality in men, but less robustly in women. The association of SOS with ASI did not explain this observation. In conclusion, our findings support a positive association between bone and vascular health with consistent patterns of association in men and women. The underlying mechanisms are complex and appear to vary by sex. © 2020 The Authors. Journal of Bone and Mineral Research published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research (ASBMR). [ABSTRACT FROM AUTHOR]
- Published
- 2021
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3. Standardized image post-processing of cardiovascular magnetic resonance T1-mapping reduces variability and improves accuracy and consistency in myocardial tissue characterization.
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Carapella, Valentina, Puchta, Henrike, Lukaschuk, Elena, Marini, Claudia, Werys, Konrad, Neubauer, Stefan, Ferreira, Vanessa M., and Piechnik, Stefan K.
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CARDIAC magnetic resonance imaging , *IMAGE analysis - Abstract
Myocardial T1-mapping is increasingly used in multicentre studies and trials. Inconsistent image analysis introduces variability, hinders differentiation of diseases, and results in larger sample sizes. We present a systematic approach to standardize T1-map analysis by human operators to improve accuracy and consistency. We developed a multi-step training program for T1-map post-processing. The training dataset contained 42 left ventricular (LV) short-axis T1-maps (normal and diseases; 1.5 and 3 Tesla). Contours drawn by two experienced human operators served as reference for myocardial T1 and wall thickness (WT). Trainees (n = 26) underwent training and were evaluated by: (a) qualitative review of contours; (b) quantitative comparison with reference T1 and WT. The mean absolute difference between reference operators was 8.4 ± 6.3 ms (T1) and 1.2 ± 0.7 pixels (WT). Trainees' mean discrepancy from reference in T1 improved significantly post-training (from 8.1 ± 2.4 to 6.7 ± 1.4 ms; p < 0.001), with a 43% reduction in standard deviation (SD) (p = 0.035). WT also improved significantly post-training (from 0.9 ± 0.4 to 0.7 ± 0.2 pixels, p = 0.036), with 47% reduction in SD (p = 0.04). These experimentally-derived thresholds served to guide the training process: T1 (±8 ms) and WT (±1 pixel) from reference. A standardized approach to CMR T1-map image post-processing leads to significant improvements in the accuracy and consistency of LV myocardial T1 values and wall thickness. Improving consistency between operators can translate into 33–72% reduction in clinical trial sample-sizes. This work may: (a) serve as a basis for re-certification for core-lab operators; (b) translate to sample-size reductions for clinical studies; (c) produce better-quality training datasets for machine learning. • T1-mapping MRI is increasingly being employed as a Cardiovascular MRI technique in clinical studies and trials. • Standardisation of T1 mapping post-processing is still limited, hindering reproducibility and consistency across centres. • High-quality manual contouring of T1 maps is crucial to ensure good quality training data for machine learning algorithms. • Our training programme shows statistically significant reduction in discrepancy between operators analysing T1 maps. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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4. Total Mapping Toolbox (TOMATO): An open source library for cardiac magnetic resonance parametric mapping
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Werys, Konrad, Dragonu, Iulius, Zhang, Qiang, Popescu, Iulia, Hann, Evan, Puchta, Henrike, Kubik, Agata, Polat, Dogan, Wu, Cody, Moon, Niall O., Barutcu, Ahmet, Ferreira, Vanessa M., and Piechnik, Stefan K.
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- 2020
- Full Text
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5. Automated localization and quality control of the aorta in cine CMR can significantly accelerate processing of the UK Biobank population data.
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Biasiolli, Luca, Hann, Evan, Lukaschuk, Elena, Carapella, Valentina, Paiva, Jose M., Aung, Nay, Rayner, Jennifer J., Werys, Konrad, Fung, Kenneth, Puchta, Henrike, Sanghvi, Mihir M., Moon, Niall O., Thomson, Ross J., Thomas, Katharine E., Robson, Matthew D., Grau, Vicente, Petersen, Steffen E., Neubauer, Stefan, and Piechnik, Stefan K.
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CARDIAC magnetic resonance imaging ,FORCED vibration (Mechanics) ,RESONATORS ,CHEST (Anatomy) ,BLOOD circulation - Abstract
Introduction: Aortic distensibility can be calculated using semi-automated methods to segment the aortic lumen on cine CMR (Cardiovascular Magnetic Resonance) images. However, these methods require visual quality control and manual localization of the region of interest (ROI) of ascending (AA) and proximal descending (PDA) aorta, which limit the analysis in large-scale population-based studies. Using 5100 scans from UK Biobank, this study sought to develop and validate a fully automated method to 1) detect and locate the ROIs of AA and PDA, and 2) provide a quality control mechanism. Methods: The automated AA and PDA detection-localization algorithm followed these steps: 1) foreground segmentation; 2) detection of candidate ROIs by Circular Hough Transform (CHT); 3) spatial, histogram and shape feature extraction for candidate ROIs; 4) AA and PDA detection using Random Forest (RF); 5) quality control based on RF detection probability. To provide the ground truth, overall image quality (IQ = 0–3 from poor to good) and aortic locations were visually assessed by 13 observers. The automated algorithm was trained on 1200 scans and Dice Similarity Coefficient (DSC) was used to calculate the agreement between ground truth and automatically detected ROIs. Results: The automated algorithm was tested on 3900 scans. Detection accuracy was 99.4% for AA and 99.8% for PDA. Aorta localization showed excellent agreement with the ground truth, with DSC ≥ 0.9 in 94.8% of AA (DSC = 0.97 ± 0.04) and 99.5% of PDA cases (DSC = 0.98 ± 0.03). AA×PDA detection probabilities could discriminate scans with IQ ≥ 1 from those severely corrupted by artefacts (AUC = 90.6%). If scans with detection probability < 0.75 were excluded (350 scans), the algorithm was able to correctly detect and localize AA and PDA in all the remaining 3550 scans (100% accuracy). Conclusion: The proposed method for automated AA and PDA localization was extremely accurate and the automatically derived detection probabilities provided a robust mechanism to detect low quality scans for further human review. Applying the proposed localization and quality control techniques promises at least a ten-fold reduction in human involvement without sacrificing any accuracy. [ABSTRACT FROM AUTHOR]
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- 2019
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6. Standardization of T1-mapping in cardiovascular magnetic resonance using clustered structuring for benchmarking normal ranges.
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Popescu, Iulia A., Werys, Konrad, Zhang, Qiang, Puchta, Henrike, Hann, Evan, Lukaschuk, Elena, Ferreira, Vanessa M., and Piechnik, Stefan K.
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MAGNETIC resonance , *MAGNETIC flux density , *STANDARDIZATION , *QUALITY control , *K-means clustering - Abstract
Cardiovascular magnetic resonance T1-mapping is increasingly used for tissue characterization, commonly based on Modified Look-Locker Inversion recovery (MOLLI). However, there are numerous MOLLI variants with differing normal ranges. This lack of standardization presents confusion and difficulty in inter-center comparisons, hindering widespread adoption of T1-mapping. To address this, we performed a structured literature search for native left ventricular myocardial T1-mapping in healthy humans measured using MOLLI variants at 1.5 and 3 Tesla, across scanner vendors. We then used k-means clustering to structure normal MOLLI-T1 values according to magnetic field strength, and investigated correlations between common imaging parameters: repetition time (TR), echo time (TE), flip angle (FA). We analyzed data from 2207 healthy controls in 76 independent reports. Normal MOLLI-T1 standard deviations varied by 11-fold, and dependencies on TE, TR, and FA differed between 1.5 T and 3 T, thwarting meaningful T1 standardization even within a single field strength, including the use of Z-score. However, divergent MOLLI-T1 norms may be structured using data clustering. For 1.5 T, two clusters emerged: Cluster1 1.5T : T1 = 958 ± 16 ms (n = 1280); Cluster2 1.5T : T1 = 1027 ± 19 ms (n = 386). For 3 T, three clusters emerged: Cluster1 3T : T1 = 1160 ± 21 ms (n = 330); Cluster2 3T : T1 = 1067 ± 18 ms (n = 178); Cluster3 3T : T1 = 1227 ± 19 ms (n = 41). We then propose the concept of an online calculator for assigning local norms to a known MOLLI-T1 cluster, allowing benchmarking against published norms. Clustered structuring allows T1 standardization of widely-divergent MOLLI variants, benchmarking local norms (usually based on smaller samples) against published norms (larger samples). This may increase confidence and quality control in method implementation, facilitating wider clinical adoption of T1-mapping. • Normal myocardial T1 values vary widely across different MOLLI T1-mapping methods. • Clustered structuring via an online calculator is practical for T1 standardization. • Clustered structuring allows benchmarking of local norms against published norms. • Clustered structuring increases confidence and quality in T1-mapping implementation. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
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