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Plant disease classification is quite complex and, in most cases, requires trained plant pathologists and sophisticated labs to accurately determine the cause. Our group for the first time used microscopic images (x30) of tomato plant diseases, for which representative plant samples were diagnostically validated to classify disease symptoms using non-coding deep learning platforms (NCDL). The mean F1 scores (SD) of the NCDL platforms were 98.5 (1.6) for Amazon Rekognition Custom Label, 93.9 (2.5) for Clarifai, 91.6 (3.9) for Teachable Machine, 95.0 (1.9) for Google AutoML Vision, and 97.5 (2.7) for Microsoft Azure Custom Vision. The accuracy of the NCDL platform for Amazon Rekognition Custom Label was 99.8% (0.2), for Clarifai 98.7% (0.5), for Teachable Machine 98.3% (0.4), for Google AutoML Vision 98.9% (0.6), and for Apple CreateML 87.3 (4.3). Upon external validation, the model's accuracy of the tested NCDL platforms dropped no more than 7%. The potential future use for these models includes the development of mobile- and web-based applications for the classification of plant diseases and integration with a disease management advisory system. The NCDL models also have the potential to improve the early triage of symptomatic plant samples into classes that may save time in diagnostic lab sample processing. [ABSTRACT FROM AUTHOR]

Bacterial wilt caused by Ralstonia solanacearum is a major constraint for tomato production in Benin. Through this research, the distribution and incidence of bacterial wilt and its dissemination factors in tomato fields were assessed. Identification of isolates were based on morphological characterization of colonies, hypersensitivity, and pathogenicity tests. Dissemination factors were analysed through a binomial logit model. Bacterial wilt was widespread in all Benin's eight Agro-Ecological Zones (AEZs), and mostly severe in AEZs dominated by ferralitic soils where its highest incidence was up to 100%. Other variables such as post-harvest crop residues plowed into soils, rotation practices, use of mineral fertilizer, watering practices, use of the same tools in many fields, positively influenced the probability of bacterial wilt infection in tomato fields. Dissemination of R. solanacearum is more favorited by women agricultural practices than men. Farmer's awareness on good agricultural practices could help to reduce the pressure of the disease. [ABSTRACT FROM AUTHOR]

Begomoviruses and criniviruses, vectored by whiteflies (Bemisia tabaci), are important threats to crops worldwide. In recent years, the spread of cucurbit leaf crumple virus (CuLCrV), cucurbit yellow stunting disorder virus (CYSDV) and cucurbit chlorotic yellows virus (CCYV) on cucurbit crops has been reported to cause devastating crop losses in many regions of the world. In this study, a multiplex recombinase polymerase amplification (RPA) assay, an isothermal technique for rapid and simultaneous detection of DNA and RNA viruses CuLCrV, CYSDV and CCYV was developed. Highly specific and sensitive multiplex RPA primers for the coat protein region of these viruses were created and evaluated. The sensitivity of the multiplex RPA assay was examined using serially diluted plasmid containing the target regions. The results demonstrated that multiplex RPA primers have high sensitivity with a detection limit of a single copy of the viruses. The multiplex RPA primers were specific to the target as indicated by testing against other begomoviruses, potyviruses and an ilarvirus, and no nonspecific amplifications were noted. The primers simultaneously detected mixed infection of CCYV, CYSDV and CuLCrV in watermelon and squash crude extracts. This study is the first report of a multiplex RPA assay for simultaneous detection of mixed infection of DNA and RNA plant viruses. [ABSTRACT FROM AUTHOR]

Rose (Rosa spp.) is a very important ornamental shrub cultivated worldwide and of value for the pharmaceutical industry. The plant is broadly susceptible to pathogens, including viruses. Rose rosette virus (RRV; virus species Emaravirus rosae) causes multiple symptoms typically rosettes, ultimately leading to death. The virus transmission is by grafting and a wind‐dispersed eriophyoid mite, Phyllocoptes fructiphilus, which survives in winter‐dormant plants. Due to extensive globalization RRV is a threat for the European rose, landscape, nursery and tourism industries. The most common and reliable method used for RRV detection is RT‐PCR. Positive control is indispensable for PCR reliability and can be difficult to obtain for emerging or highly contagious pathogens and are subject to BSL‐2 quarantine. A synthetic artificial positive control (APC) using custom DNA inserts of sense and anti‐sense primers was designed de novo and inserted in a circular plasmid vector to create a positive control for use with most RRV reported primers and eriophyoid mites. This study describes a functional demonstration and development of a rapid, consistent, adaptable and cost‐effective alternative to infected true‐tissue positive control for detection of RRV. The inserted RRV primers are for end point and quantitative RT‐PCR, reverse transcription loop‐mediated isothermal amplification (RT‐LAMP), recombinase‐polymerase amplification (RPA), broad detection of emaravirus and the eriophyoid mite vector Phyllocoptes fructiphilus. The APC‐RRV and RRV infected rose (leaf tissue) were tested side to side. Results demonstrated APC‐RRV is a safe, cloneable and reliable approach subjected to quality control with application in quarantine surveillance and routine diagnostics of RRV. [ABSTRACT FROM AUTHOR]

Bacterial spot of tomato is among the most economically relevant diseases affecting tomato plants globally. In previous studies, non-formulated magnesium oxide nanoparticles (nano-MgOs) significantly reduced the disease severity in greenhouse and field conditions. However, the aggregation of nano-MgO in liquid suspension makes it challenging to use in field applications. Therefore, we formulated two novel MgO nanomaterials (SgMg #3 and SgMg #2.5) and one MgOH2 nanomaterial (SgMc) and evaluated their physical characteristics, antibacterial properties, and disease reduction abilities. Among the three Mg nanomaterials, SgMc showed the highest efficacy against copper-tolerant strains of Xanthomonas perforans in vitro, and provided disease reduction in the greenhouse experiments compared with commercial Cu bactericide and an untreated control. However, SgMc was not consistently effective in field conditions. To determine the cause of its inconsistent efficacy in different environments, we monitored particle size, zeta potential, morphology, and crystallinity for all three formulated materials and nano-MgOs. The MgO particle size was determined by the scanning electron microscopy (SEM) and dynamic light scattering (DLS) techniques. An X-ray diffraction (XRD) study confirmed a change in the crystallinity of MgO from a periclase to an Mg(OH)2 brucite crystal structure. As a result, the bactericidal activity correlated with the high crystallinity present in nano-MgOs and SgMc, while the inconsistent antimicrobial potency of SgMg #3 and SgMg #2.5 might have been related to loss of crystallinity. Future studies are needed to determine which specific variables impair the performance of these nanomaterials in the field compared to under greenhouse conditions. Although SgMc did not lead to significant disease severity reduction in the field, it still has the potential to act as an alternative to Cu against bacterial spot disease in tomato transplant production. [ABSTRACT FROM AUTHOR]

Bacterial diseases are a constant threat to crop production globally. Current management strategies rely on an array of tactics, including improved cultural practices; application of bactericides, plant activators, and biocontrol agents; and use of resistant varieties when available. However, effective management remains a challenge, as the longevity of deployed tactics is threatened by constantly changing bacterial populations. Increased scrutiny of the impact of pesticides on human and environmental health underscores the need for alternative solutions that are durable, sustainable, accessible to farmers, and environmentally friendly. In this review, we discuss the strengths and shortcomings of existing practices and dissect recent advances that may shape the future of bacterial disease management. We conclude that disease resistance through genome modification may be the most effective arsenal against bacterial diseases. Nonetheless, more research is necessary for developing novel bacterial disease management tactics to meet the food demand of a growing global population. [ABSTRACT FROM AUTHOR]

Disease symptoms: Symptoms include water‐soaked areas surrounded by chlorosis turning into necrotic spots on all aerial parts of plants. On tomato fruits, small, water‐soaked, or slightly raised pale‐green spots with greenish‐white halos are formed, ultimately becoming dark brown and slightly sunken with a scabby or wart‐like surface. Host range: Main and economically important hosts include different types of tomatoes and peppers. Alternative solanaceous and nonsolanaceous hosts include Datura spp., Hyoscyamus spp., Lycium spp., Nicotiana rustica, Physalis spp., Solanum spp., Amaranthus lividus, Emilia fosbergii, Euphorbia heterophylla, Nicandra physaloides, Physalis pubescens, Sida glomerata, and Solanum americanum. Taxonomic status of the pathogen: Domain, Bacteria; phylum, Proteobacteria; class, Gammaproteobacteria; order, Xanthomonadales; family, Xanthomonadaceae; genus, Xanthomonas; species, X. euvesicatoria, X. hortorum, X. vesicatoria. Synonyms (nonpreferred scientific names): Bacterium exitiosum, Bacterium vesicatorium, Phytomonas exitiosa, Phytomonas vesicatoria, Pseudomonas exitiosa, Pseudomonas gardneri, Pseudomonas vesicatoria, Xanthomonas axonopodis pv. vesicatoria, Xanthomonas campestris pv. vesicatoria, Xanthomonas cynarae pv. gardneri, Xanthomonas gardneri, Xanthomonas perforans. Microbiological properties: Colonies are gram‐negative, oxidase‐negative, and catalase‐positive and have oxidative metabolism. Pale‐yellow domed circular colonies of 1–2 mm in diameter grow on general culture media. Distribution: The bacteria are widespread in Africa, Brazil, Canada and the USA, Australia, eastern Europe, and south‐east Asia. Occurrence in western Europe is restricted. Phytosanitary categorization: A2 no. 157, EU Annex designation II/A2. EPPO codes: XANTEU, XANTGA, XANTPF, XANTVE. [ABSTRACT FROM AUTHOR]

This study explores the development of Loop-mediated isothermal amplification (LAMP) for detection of rose rosette virus (RRV), a technique with the potential to be translated to rose nurseries. RRV is a negative-sense, single-stranded RNA virus which is a member of the genus Emaravirus (Family Fimoviridae) and the causal agent of the rose rosette disease (RRD). Although RRV symptoms are characteristics, early visual diagnosis of RRD can be misleading and confusing since it may appear like herbicide damage. Moreover, it may take incubation time for symptoms to appear after virus infection. Two sets of RRV gene sequences RNA3 and RNA4 were analyzed and two sets of four LAMP primers were designed. The direct antigen-capture method for direct trapping of RRV in plastic was used for RNA extraction followed by cDNA synthesis. RT-LAMP reactions were for 1 hour at 64°C (RRV-P3) and 66.5°C (RRV-P4) using either a thermocycler or a portable dry bath. RT-qLAMP was also optimized using DNA polymerase GspSSD LD using the same RRV sets of primers. RRV was detected in symptomatic and non-symptomatic RRD tissue from Oklahoma. The limit of detection (LoD) was 1pg/μL and 1 fg/μL using Bst 2.0 LAMP and GspSSD LD quantitative LAMP, respectively. In visual colorimetric pre- and post-reactions, the LoD was 10 pg/μL and 0.1 pg/μL using hydroxy naphthol blue (HNB, 120 μM) and SYBR green I (1:10 dilution), respectively. No cross-reactivity was detected in the RT-LAMP reaction testing cDNAs of eight commonly co-infecting rose viruses and one virus taxonomically related to RRV. Four different dyes were tested, and visible colorimetric reactions were obtained with RT-LAMP Bst 2.0 combined with SYBR I or HNB. RT-qLAMP with GspSSD2.0 offers LoD equal to RT-PCR and it is faster since it works with RNA directly. [ABSTRACT FROM AUTHOR]

Bacterial wilt, caused by Ralstonia solanacearum, is an emerging constraint in amaranth production in Benin. Host resistance is the most sustainable disease control measure. Ten amaranth varieties including A2002, Bresil (B) -Sel, Madiira 2, AC-NL, GARE ES13-7, Madiira 1, UG-AMES13-2, AM-NKGN, IP-5-Sel and a local variety from Benin were screened for resistance to bacterial wilt. The study was conducted in a screen house and in the naturally contaminated open field during a consecutive rainy and dry season using a randomized complete block design with four and three replications, respectively. In the screen house, plants were inoculated by drenching a 40 mL of bacterial suspension containing 108 CFU/mL of R. solanacearum strain NCBI 5 GenBank N° MH397250 at the collar region. The bacterial wilt incidence (BWI) and the area under the disease progress curve (AUDPC) suggested differential reactions of amaranth varieties to the pathogen. BWI and AUDPC were low for UG-AMES13-2, moderate for Madiira 2, AM-NKGN and the local variety and very high for A2002, Bresil (B) -Sel, AC-NL, GARE ES13-7, Madiira 1 and IP-5-Sel. The World Vegetable Center’s UG-AMES13-2 can be considered as first choice, which is resistant to R. solanacearum, and should be scaled up for seed production towards supporting farmers. [ABSTRACT FROM AUTHOR]

Fusarium wilt of watermelon (Citrullus lanatus) caused by Fusarium oxysporum f. sp. niveum (Fon), has become an increasing concern of farmers in the southeastern USA, especially in Florida. Management of this disease, most often through the use of resistant cultivars and crop rotation, requires an accurate understanding of an area's pathogen population structure and phenotypic characteristics. This study improved the understanding of the state's pathogen population by completing multilocus sequence analysis (MLSA) of two housekeeping genes (BT and TEF) and two loci (ITS and IGS), aggressiveness and race-determining bioassays on 72 isolates collected between 2011 and 2015 from major watermelon production areas in North, Central, and South Florida. Multilocus sequence analysis (MLSA) failed to group race 3 isolates into a single large clade; moreover, clade membership was not apparently correlated with aggressiveness (which varied both within and between clades), and only slightly with sampling location. The failure of multilocus sequence analysis using four highly conserved housekeeping genes and loci to clearly group and delineate known Fon races provides justification for future whole genome sequencing efforts whose more robust genomic comparisons will provide higher resolution of intra-species genetic distinctions. Consequently, these results suggest that identification of Fon isolates by race determination alone may fail to detect economically important phenotypic characteristics such as aggressiveness leading to inaccurate risk assessment. [ABSTRACT FROM AUTHOR]

We describe the first detection of orchid fleck virus (OFV) infecting three unreported hosts: Liriope muscari , cv. 'Gigantea' (Decaisne) Bailey, Ophiopogon intermedius Don and Aspidistra elatior Blume (Asparagaceae: Nolinoidaea) in Leon and Alachua Counties, FL. The orchid-infecting subgroup (Orc) of OFV infects over 50 plant species belonging to the plant families Orchidaceae, Asparagaceae (Nolinoidaea), and causes citrus leprosis disease in Citrus (Rutaceae). The only known vectors of OFV-Orc are the flat mites, Brevipalpus californicus (Banks) sensu lato (Trombidiformes: Tenuipalpidae). Florida has various plants in the landscape which Brevipalpus spp. feed on, which are susceptible to infection by OFV-Orc. Chlorotic ringspots and flecking were seen affecting Liriopogons (Liriope and Ophiopogon spp.) in Leon County, FL. Nearby A. elatior also appeared chlorotic. Local diagnostics returned negative for common plant pathogens, therefore new samples were sent to the Florida Department of Agriculture and Consumer Services (FDACS) and USDA-ARS for identification. Two orchid-infecting strains of OFV were detected via combinations of conventional RT-PCR, RT-qPCR, Sanger sequencing, and high-throughput sequencing (HTS). Amplicons shared 98% nucleotide identity with OFV-Orc1 and OFV-Orc2 RNA2 genome sequences available in NCBI GenBank. Coinfections were detected in each county, but single strains of OFV-Orc were detected in L. muscari (Alachua, OFV-Orc2) and A. elatior (Leon, OFV-Orc1). Three potential mite vectors were identified via cryo-scanning electron microscopy (Cryo-SEM): B. californicus sensu lato , B. obovatus Donnadieu, and B. confusus Baker. In conclusion, OFV orchid strains are present in northern Florida, representing a risk for susceptible plants in the southeastern United States. [ABSTRACT FROM AUTHOR]

Bacterial wilt of tomato caused by Ralstonia solanacearum species complex (RSSC) causes substantial yield losses in the tropics and subtropics. Disease management options by chemicals are limited, and host resistance is the cheapest and easiest means of control. However, sources of bacterial wilt resistance in tomato are limited. The disease often coincides with higher temperatures in the tropics, and resistance sources that are more heat stable are particularly valuable for breeding of tropically adapted tomato cultivars. The objectives of this study were to identify tomato accessions that demonstrate relatively high bacterial wilt resistance under high temperatures and to identify accessions that may possess QTLs other than Bwr‐6 and Bwr‐12 (two major disease resistance QTLs against bacterial wilt), which could be exploited in future breeding. Sixty‐seven tomato entries reported as bacterial wilt resistant were evaluated in a greenhouse against one strain each of phylotype I (Pss4) and phylotype IIB (Pss1632) of the RSSC (average temperature ≥29°C). Of those, five and 19 were homozygous for Bwr‐6 and Bwr‐12, respectively, and six were homozygous for both QTLs. Bwr‐12 contributed to resistance against phylotype I strain but not against the phylotype II strain. Bwr‐6 contributed to resistance against both phylotype strains. Entries with both QTLs as a group performed relatively better against the phylotype I strain. Entry "94T765‐24‐79", which lacked Bwr‐6 and Bwr‐12, demonstrated relatively high resistance against the phylotype II strain and may carry new QTL/s. As new bacterial wilt resistance QTLs are mapped and markers designed, pyramiding multiple bacterial wilt resistance QTLs into new varieties should be straightforward, thereby increasing the chances of obtaining stable resistance. [ABSTRACT FROM AUTHOR]

Bacterial spot of tomato, caused by Xanthomonas perforans, X. euvesicatoria, X. vesicatoria and X. gardneri, is a major disease, contributing to significant yield losses worldwide. Over dependence of conventional copper bactericides over the last decades has led to the prevalence of copper-tolerant strains of Xanthomonas spp., making copper bactericides ineffective. Thus, there is a critical need to develop new strategies for better management of copper-tolerant Xanthomonas spp. In this study, we investigated the antimicrobial activity of a hybrid nanoparticle, copper-zinc (Cu/Zn), on copper-tolerant and sensitive strains. The hybrid nanoparticle significantly reduced bacterial growth in vitro compared to the non-treated and micron-size commercial copper controls. Tomato transplants treated with the hybrid nanoparticle had significantly reduced disease severity compared to the controls, and no phytotoxicity was observed on plants. We also studied the hybrid nanoparticle effect on the bacterial pigment xanthomonadin using Near-Infra Red Raman spectroscopy as an indicator of bacterial degradation. The hybrid nanoparticle significantly affected the ability of X. perforans in its production of xanthomonadin when compared with samples treated with micron-size copper or untreated. This study sheds new light on the potential utilization of this novel multi-site Cu/Zn hybrid nanoparticle for bacterial spot management. [ABSTRACT FROM AUTHOR]

Three field experiments were conducted in Florida from 2012-2014 to assess the impact of acibenzolar-S-methyl (ASM), a systemic acquiredresistance inducer, applied as foliar spray or through drip-irrigation lines, on bacterial wilt incidence and yield of grafted tomatoes. The experiments were conducted in a field with race 1, biovar 1 strain of Ralstonia solanacearum, causal agent of tomato bacterial wilt. In all three experiments, the susceptible tomato variety BHN 602, grafted onto a resistant rootstock BHN 998, was compared with nongrafted BHN 602, treated with or without foliar applications of ASM and with grafted plants treated with foliar applications of ASM. In two experiments, an additional treatment of drip applications of ASM on grafted and nongrafted plants was evaluated. Grafting alone or in combination with drip applications of ASM (178.6 μM) significantly reduced disease incidence and increased total marketable yield relative to nongrafted treatments. There were no significant differences between grafted plants with or without drip ASM applications in terms of bacterial wilt incidence or total marketable yield. However, we demonstrate for the first time that foliar ASM applications on grafted plants negatively affects the total marketable yield compared with drip ASM applications on grafted plants or nontreated grafted control. [ABSTRACT FROM AUTHOR]

Taxonomic status Bacteria; Phylum Proteobacteria; Class Gammaproteobacteria; Order Xanthomonadales; Family Xanthomonadaceae; Genus Xanthomonas; Species Xanthomonas euvesicatoria, Xanthomonas vesicatoria, Xanthomonas perforans and Xanthomonas gardneri. Microbiological properties Gram-negative, rod-shaped bacterium, aerobic, motile, single polar flagellum. Host range Causes bacterial spot disease on plants belonging to the Solanaceae family, primarily tomato ( Solanum lycopersicum), pepper ( Capsicum annuum) and chilli peppers ( Capsicum frutescens). Disease symptoms Necrotic lesions on all above-ground plant parts. Distribution Worldwide distribution of X. euvesicatoria and X. vesicatoria on tomato and pepper; X. perforans and X. gardneri increasingly being isolated from the USA, Canada, South America, Africa and Europe. A wide diversity within the bacterial spot disease complex, with an ability to cause disease at different temperatures, makes this pathogen group a worldwide threat to tomato and pepper production. Recent advances in genome analyses have revealed the evolution of the pathogen with a plethora of novel virulence factors. Current management strategies rely on the use of various chemical control strategies and sanitary measures to minimize pathogen spread through contaminated seed. Chemical control strategies have been a challenge because of resistance by the pathogen. Breeding programmes have been successful in developing commercial lines with hypersensitive and quantitative resistance. However, durability of resistance has been elusive. Recently, a transgenic approach has resulted in the development of tomato genotypes with significant levels of resistance and improved yield that hold promise. In this article, we discuss the current taxonomic status, distribution of the four species, knowledge of virulence factors, detection methods and strategies for disease control with possible directions for future research. [ABSTRACT FROM AUTHOR]

Gummy stem blight (GSB) is one of the most destructive foliar diseases of cucurbits, worldwide. To identify and characterize the pathogen which causes GSB on watermelon and muskmelon in East China, morphological characteristics, pathogenicity assays as well as sequence characterization of the rDNA internal transcribed spacer (ITS) were performed on 41 isolates collected from Jiangsu, Zhejiang, Anhui and Jiangxi provinces. The mycelia of all the isolates were white on top and olivaceous green to black with concentric circles at the bottom on potato-dextrose agar medium. The isolates differed significantly on aggressiveness based on pathogenicity assays. rDNA-ITS sequences and phylogenetic analysis confirmed the isolates as Didymella bryoniae. The isolates were found to be highly identical with the exception of 13 isolates, which had a guanine substitution instead of adenine at position 131 of the ITS. [ABSTRACT FROM AUTHOR]

Root-knot nematodes (RKNs; Meloidogyne spp.) and Ralstonia solanacearum, the causal agent of bacterial wilt, are major soilborne pathogens in U.S. tomato production. Methyl bromide has been used for decades to effectively manage RKN but its phase-out and the high cost of other effective fumigants such as 1,3-dichloropropene has resulted in a need to develop sustainable alternatives. Many of the commercially popular varieties used by the tomato industry do not have resistance to RKNs and R. solanacearum. Recent studies worldwide have shown the potential for grafting using resistant rootstocks as a sustainable and ecofriendly practice for R. solanacearum management. However, the effectiveness of R. solanacearum-resistant rootstocks on RKN management is not known. In this study, three commercially available R. solanacearum-resistant tomato rootstocks ('RST-04-106-T', 'BHN 998', and 'BHN 1054') were evaluated for resistance to Meloidogyne incognita in field tomato production in four field trials conducted for two consecutive years in two geographical locations: Florida and Virginia. Grafting rootstocks onto 'BHN 602' a tomato scion susceptible to bacterial wilt and RKNs, significantly reduced root galling caused by RKNs in all four field trials and increased yield in two of the trials compared with the nongrafted treatment. This study demonstrates the potential of grafting for managing multiple soilborne pathogens using the same rootstocks. [ABSTRACT FROM AUTHOR]

Bacterial spot of tomato (BST) is a major constraint to tomato production in Ethiopia and many other countries leading to significant crop losses. In the present study, using pathogenicity tests, sensitivity to copper and streptomycin, and multilocus sequence analysis (MLSA), we identified a diverse group of Xanthomonas strains isolated from central Ethiopia. None of the strains were sensitive to copper or streptomycin. Multilocus sequence analysis was used to compare Ethiopian strains with representative Xanthomonas strains from a worldwide collection based on DNA sequences of six housekeeping genes ( lacF, lepA, gyrB, fusA, gltA and gapA) and hrpB genes . Phylogenetic analysis of the concatenated sequences showed that X. gardneri, X. vesicatoria and X. perforans were associated with BST in Ethiopia, whereas Xanthomonas euvesicatoria was absent from the Ethiopian sample. There was no genetic diversity among the isolated strains belonging to X. gardneri and X. perforans. However, two X. vesicatoria haplotypes were identified indicating at least two different sources of introduction of X. vesicatoria to Ethiopia. All of the X. perforans strains were only pathogenic on tomato and were T3 strains with the exception of one identified as tomato race 4 (T4). The X. gardneri and X. vesicatoria strains were tomato race 2 (T2), but were variable in pepper race determinations indicating variation in effectors among strains. [ABSTRACT FROM AUTHOR]

Protection of crops from bacterial diseases presents a continuing challenge, mandating the development of novel agents and approaches. Photocatalysis is a process where chemically reactive oxygen species are catalytically generated by certain minerals in the presence of light. These reactive oxygen species have the capacity to destroy organic molecular structures critical to pathogen viability. In this study, the antibacterial potential of photocatalytic nanoscale titanium dioxide (TiO2), nanoscale TiO2 doped (incorporation of other materials into the structure of TiO2) with silver (TiO2/Ag), and nanoscale TiO2 doped with zinc (TiO2/Zn; AgriTitan) was evaluated against Xanthomonas perforans, the causal agent for bacterial spot disease of tomato. In vitro experiments on photocatalytic activity and dose dependency were conducted on glass cover slips coated with the nanoscale formulations by adding a known population of X. perforans strain Xp-F7 and illuminating the cover slips under a visible light source. TiO2/Ag and TiO2/Zn had high photocatalytic activity against X. perforans within 10 min of exposure to 3 x 104 lux. Greenhouse studies on naturally and artificially infected transplants treated with TiO2/Zn at ≈ 500 to 800 ppm significantly reduced bacterial spot severity compared with untreated and copper control. Protection was similar to the grower standard, copper + mancozeb. The use of TiO2/Zn at ≈500 to 800 ppm significantly reduced disease incidence in three of the four trials compared with untreated and copper control, and was comparable to or better than the grower standard. The treatments did not cause any adverse effects on tomato yield in any of the field trials. [ABSTRACT FROM AUTHOR]

Bacterial leaf spot on roses caused by a Xanthomonas sp. is a new disease affecting commercial rose production with the potential to cause major economic losses. In the past few decades, antimicrobial photocatalyst technology has emerged from basic research and development to provide convenient formulations of titanium dioxide (TiO2) nanoparticles, which have the ability to destroy bacteria on surfaces in the presence of light. In this study, a TiO2 nanoparticle formulation containing zinc (TiO2/Zn) was tested for management of bacterial leaf spot on Rosa 'Noare'. TiO2/Zn caused significant reduction in the survival of Xanthomonas sp. strain Xr-1 on glass coverslips coated with the nanoparticles on exposure to light at 3 x 104 lux for 10 minutes. There was no reduction of bacterial viability in non-coated or non-illuminated controls. Field applications of TiO2/Zn at ≈500 to 800 ppm on Rosa 'Noare' significantly reduced bacterial spot severity compared with the untreated control. TiO2/Zn activity was better or on par with the ornamental industry standard for management of rose diseases. [ABSTRACT FROM AUTHOR]

The genus, Magnolia, encompasses a group of about 240 species of evergreen or deciduous trees and large shrubs. Magnolias are native to temperate, subtropical and tropical areas of southeastern Asia, eastern North America, Central America, the Caribbean and parts of South America. Native and nonnative Magnolia species have become prominent landscape plants in the southeastern U.S. due to their beauty, utility, relative ease of maintenance and broad adaptability to the region's climate and soils. Species introductions, breeding and selection programs over the last 50 years have produced superior selections with improved flowering, new flower colors and ornamental foliage and buds often featuring brown, copper or gold indumentum. Magnolia health and pest management is sometimes overlooked in both landscape and production settings because magnolia is considered to have relatively few pest and disease problems. Some abiotic disorders may mimic biotic damage or may render magnolia more susceptible to pests and diseases. When they occur, abiotic disorders, pests or diseases on magnolia can cause significant economic or aesthetic losses. This review focuses on magnolia culture in production and landscape settings with an emphasis on major pests, plant diseases and abiotic disorders affecting management of Magnolia species. [ABSTRACT FROM AUTHOR]

Essential oils of palmarosa, lemongrass, and eucalyptus have shown promise as biofumigants for control of the bacterial wilt disease of edible ginger (Zingiber officinale) caused by Ralstonia solanacearum race 4 in previous potting medium studies. Biochemical changes in R. solanacearum cells were evaluated with micro-Raman spectroscopy following treatment with essential oils at different concentrations (0.04, 0.07, and 0.14% [vol/vol] of culture medium) and changes in cell structure were observed using electron microscopy. All treatments except palmarosa oil at 0.04% caused significant reductions in levels of amino acids, purine and pyrimidine bases of nucleic acids, carbohydrates, and lipids, as indicated by significant reduction in Raman peak heights at 621, 1,003, and 1,031 inverse centimeters (cm-1) (phenylalanine); 643, 827, 852, 1,158, and 1,172 cm-1 (tyrosine); 758 cm-1 (tryptophan); 725, 782, 1,337, and 1,578 cm-1 (adenine, cytosine plus uracil, adenine, and adenine plus guanine, respectively); 1,097 cm-1 (carbohydrates); and 1, 127, 1,450, and 2,932 cm-1 (lipids) compared with untreated controls. Lemongrass oil treatments were the most effective in degrading cellular components. Scanning electron microscopy of palmarosa and lemongrass-oil-treated cells showed rupture of cell walls and cell debris but no degradation was noted for eucalyptus-oil-treated cells. Palmarosa- and lemongrass-oil-treated cells were positively stained with uranyl acetate when viewed by transmission electron microscopy whereas controls and eucalyptus-oil-treated cells were negatively stained, indicating that the cell membranes were intact. The viability of eucalyptus-oil-treated cells was confirmed by cell culture following treatment. Micro-Raman spectroscopy is a powerful tool which can be further employed to better understand effects of fumigants and other bactericides on bacterial cells. [ABSTRACT FROM AUTHOR]

Pal marosa (C'y,nbopogon martini), lemongrass (C. citratus), and eucalyptus (Eucalyptus globtilus) oils were investigated for their effects on Raistonia solanacearu,n race 4 and their potential use as biofumigants for reducing bacterial wilt disease of edible ginger (Zin giber officinale). Three concentrations of the oils (0.04, 0.07, and 0.14% vol/vol) were evaluated by culture amendment assays. epifluorescence microscopy, and studies in potting medium. In culture amendment assays with palmarosa and lemongrass oils at 0.04%, both oils significantly reduced the growth of the bacterium compared with the control, and at 0.07 and 0.14% they showed complete inhibition of bacterial growth. Epifluorescence microscopic observations showed cell deterioration in 95 to 100% of the cells at all concentrations of palmarosa and lemongrass oils, indicating its bactericidal properties. Eucalyptus oil treatments at 0.04 and 0.07% had bacteriostatic effects on the cells. The pathogen was not detected in R. solanacearuin-infested potting medium after treatment with palmarosa and lemongrass oils at 0.07 and 0.14% in any of the experiments. Bacterial wilt incidence on edible ginger was significantly reduced when planted in essential oil-treated potting medium. None of the essential oil treatments reduced the growth or yield of edible ginger grown for 180 days in 5-liter pots. [ABSTRACT FROM AUTHOR]

Simple Summary: Rose rosette disease (RRD) is a serious disease of rose caused by the rose rosette virus (RRV). An eriophyid mite, Phyllocoptes fructiphilus, is the vector of RRV. The RRD symptoms affect the normal growth and development of rose plants. Because there is no cure for RRD, this disease threatens the rose industry, including container nurseries and cut flowers in the U.S. The seasonal occurrence and abundance of the vector and the locations they colonize on the plant are poorly studied in Georgia. The eriophyid mites are active from April to December on rose plants. The eriophyid mites were more abundant on the plants with RRD symptoms than on plants without any symptoms. The mites were found on both closed and opened flower buds alike. More mites were found on leaf bases and sepals than on other plant parts, such as leaf surfaces, stem, petals, anthers, stigma, and style. These results will help to develop integrated pest management strategies for the mite vector and reduce the spread of RRD. Phyllocoptes fructiphilus Keifer (Acari: Eriophyidae) is the vector of rose rosette virus (RRV), which causes rose rosette disease (RRD) in North America. The RRD symptoms, such as witches' broom, flower, and leaf deformation, disrupt the aesthetic appearance of plants and cause plant mortality. Because there is no cure for RRV, it is critical to manage the vector and reduce the spread of the virus. The information on the phenology of P. fructiphilus on rose plants is essential to develop management strategies and reduce its spread. Thus, the objectives of the study were to determine 1) the phenology of eriophyid mites (including P. fructiphilus) in central Georgia due to its widespread occurrence in the state and 2) the incidence of eriophyid mites on closed and opened flower buds and other plant parts. In central Georgia, eriophyid mites, including P. fructiphilus were active on both symptomatic and asymptomatic plants from April to December. The mite densities were greater during July and August than during the remaining months on asymptomatic plants. The mites were more abundant on the RRD-symptomatic than on the asymptomatic plants. Similar numbers of eriophyid mites were observed on closed and opened flower buds. Eriophyid mite densities were greater on sepals and leaf bases than on other plant parts. [ABSTRACT FROM AUTHOR]

Bacterial spot disease caused by Xanthomonas euvesicatoria is one of the major constraints for pepper production in Florida and worldwide. The common prevalence of copper (Cu)-tolerant X. euvesicatoria strains has reduced the efficacy of Cu based bactericides against bacterial spot of pepper. In this study, we evaluated antimicrobial activity of three Cu-based nanocomposites, namely, core-shell Cu (CS–Cu), fixed-quat Cu (FQ-Cu) and mixed-valence Cu (MV-Cu), along with Kocide® 3000, which is a micron size metallic Cu bactericide and is commercially available, both in vitro and in greenhouse trials, against a Cu-tolerant strain of X. euvesicatoria. In repeated in vitro tests, X. euvesicatoria growth was completely inhibited 24 h after exposure of bacterial cells to 500 and 1000 μg/ml of MV-Cu and all concentrations of FQ-Cu and CS-Cu (100, 200, 500, and 1000 μg/ml) treated for 1 h. Micron size copper, even at 1000 μg/ml, had no statistical difference in growth in comparison to the untreated control (P = 0.05; LSD). In the repeated greenhouse experiments, plants treated with all the copper composites exhibited less bacterial spot severity than untreated control and similar or significantly less than Cu-mancozeb (P < 0.05). However, MV-Cu was the only Cu composite with no phytotoxicity on plants under controlled conditions. This study shows potential to use Cu-based nanoparticles for efficient management of bacterial spot on pepper. [ABSTRACT FROM AUTHOR]

The widespread presence of tolerance to copper in Xanthomonas species has resulted in the need to develop alternative approaches to control plant diseases caused by xanthomonads. In recent years, nanotechnological approaches have resulted in the identification of novel materials to control plant pathogens. With many metal-based nanomaterials having shown promise for disease control, an important question relates to the mode of action of these new materials. In this study, we used several approaches, such as scanning electron microscopy, propidium monoazide quantitative polymerase chain reaction, epifluorescence microscopy, and RNA sequencing to elucidate the mode of action of a Cu/Zn hybrid nanoparticle against copper-tolerant strains of Xanthomonas euvesicatoria. We demonstrate that Cu/Zn did not activate copper resistance genes (i.e., copA and copB) in the copper-tolerant bacterium but functioned by disrupting the bacterial cell structure and perturbing important biological processes such as cell respiration and chemical homeostasis. [ABSTRACT FROM AUTHOR]

Xanthomonas spp. infect a wide range of annual and perennial plants. Bacterial blight in young seedlings of Eucalyptus spp. in Indonesia was originally identified as X. perforons. However, these strains failed to elicit a hypersensitive response (HR) on either tomatoes or peppers. Two of the strains, EPK43 and BCC 972, when infiltrated into tomato and pepper leaves, failed to grow to significant levels in comparison with well-characterized X. euvesicatoria pv. perforons (Xp) strains. Furthermore, spray inoculation of 'Bonny Best' tomato plants with abacterial suspension of the Eucalyptus strains resulted in no obvious symptoms. We sequenced the whole genomes of eight strains isolated from two Eucalyptus species between 2007 and 2015. The strains had average nucleotide identities (ANIs) of at least 97.8 with Xp and X. euvesicatoria pv. euvesicatoria (Xeu) strains, both of which are causal agents of bacterial spot of tomatoes and peppers. A comparison of the Eucalyptus strains revealed that the ANI values were >99.99% with each other. Core genome phylogeny clustered all Eucalyptus strains with X. euvesicatoria pv. rosa. They formed separate clades, which included X. euvesicatoria pv. alangii, X. euvesicatoria pv. citrumelonis, and X. euvesicatoria pv. alfalfae. Based on ANI, phylogenetic relationships, and pathogenicity, we designated these Eucalyptus strains as X. euvesicatoria pv. eucalypti (Xee). Comparative analysis of sequenced strains provided unique profiles of type III secretion effectors. Core effector XopD, present in all pathogenic Xp and Xeu strains, was absent in theXee strains. Comparison of the hrp clusters of Xee, Xp, and Xeu genomes revealed that HrpE in Xee strains was very different from that in Xp and Xeu. To determine if it was functional, we deleted the gene and complemented with the Xee hrpE, confirming it was essential for secretion of type III effectors. HrpE has a hypervariable N-terminus in Xanthomonas spp., in which the N-terminus of Xee strains differs significantly from those of Xeu and Xp strains. [ABSTRACT FROM AUTHOR]

Rose rosette emaravirus (RRV, genus Emaravirus), the causal agent of rose rosette disease, is the topmost pathogen of concern for the rose industry in the United States. The only strategy available for disease management is early identification and eradication of the infected plants. Highly reliable, specific, and sensitive detection assays are thus required to test and confirm the presence of RRV in suspected plant samples. RRV is only a recently characterized virus and hence limits the diagnostic tools available for its early detection. With a U.S. Department of Agriculture (USDA) Specialty Crop Research Initiative (SCRI) project sponsorship, several diagnostic tools including end-point reverse transcriptionpolymerase chain reaction (RT-PCR) and RT-qPCR assays targeting single and multiple genes targets were developed for routine diagnostics. This review introduces an overall view of the different diagnostic tools developed, which are reliable, highly sensitive, and can be easily implemented for detection and identification in laboratories providing diagnostic services and confirmation of RRV-infected samples. [ABSTRACT FROM AUTHOR]