143 results on '"Owen, DJ"'
Search Results
2. Waterless inks
- Author
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Owen, DJ
- Published
- 1998
- Full Text
- View/download PDF
3. Dual Function of the pUL7-pUL51 Tegument Protein Complex in Herpes Simplex Virus 1 Infection
- Author
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Albecka, A, Owen, DJ, Ivanova, L, Brun, J, Liman, R, Davies, L, Ahmed, MF, Colaco, S, Hollinshead, M, Graham, SC, Crump, CM, Graham, Stephen [0000-0003-4547-4034], Crump, Colin [0000-0001-9918-9998], and Apollo - University of Cambridge Repository
- Subjects
human herpesviruses ,UL7 ,tegument ,viruses ,UL51 ,focal adhesion ,herpes simplex virus - Abstract
The tegument of herpesviruses is a highly complex structural layer between the nucleocapsid and the envelope of virions. Tegument proteins play both structural and regulatory functions during replication and spread, but the interactions and functions of many of these proteins are poorly understood. Here we focus on two tegument proteins from herpes simplex virus 1 (HSV-1), pUL7 and pUL51, which have homologues in all other herpesviruses. We have now identified that HSV-1 pUL7 and pUL51 form a stable and direct protein-protein interaction, their expression levels rely on the presence of each other, and they function as a complex in infected cells. We demonstrate that expression of the pUL7-pUL51 complex is important for efficient HSV-1 assembly and plaque formation. Furthermore, we also discovered that the pUL7-pUL51 complex localizes to focal adhesions at the plasma membrane in both infected cells and in the absence of other viral proteins. The expression of pUL7-pUL51 is important to stabilize focal adhesions and maintain cell morphology in infected cells and cells infected with viruses lacking pUL7 and/or pUL51 round up more rapidly than cells infected with wild-type HSV-1. Our data suggest that, in addition to the previously reported functions in virus assembly and spread for pUL51, the pUL7-pUL51 complex is important for maintaining the attachment of infected cells to their surroundings through modulating the activity of focal adhesion complexes. $\textbf{IMPORTANCE}$: The $\textit{Herpesviridae }$ is a large family of highly successful human and animal pathogens. Virions of these viruses are composed of many different proteins, most of which are contained within the tegument, a complex structural layer between the nucleocapsid and the envelope within virus particles. Tegument proteins have important roles in assembling virus particles as well as modifying host cells to promote virus replication and spread. However, little is known about the function of many tegument proteins during virus replication. Our study focuses on two tegument proteins from herpes simplex virus 1 that are conserved in all herpesviruses: pUL7 and pUL51. We demonstrate that these proteins directly interact and form a functional complex that is important for both virus assembly and modulation of host cell morphology. Further, we identify for the first time that these conserved herpesvirus tegument proteins localize to focal adhesions in addition to cytoplasmic juxtanuclear membranes within infected cells.
- Published
- 2017
4. Developing optimal search strategies for finding information on herbs and other medicinal plants in MEDLINE.
- Author
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Saxton JD and Owen DJ
- Abstract
The MEDLINE((R)) database is an important resource for locating up-to-date information on herbs and other botanical therapies. However, the evolving nature of complementary and alternative medicine (CAM) and the complexity of herbal terminology can make it difficult to identify useful citations. This paper describes optimal search strategies for finding clinical information on herbs and medicinal plants in MEDLINE using the PubMed retrieval system. Searchers will benefit from an understanding of the structure of Medical Subject Headings (MeSH) and PubMed's advanced search capabilities. Details for using PubMed's MeSH Database, Clinical Queries, Clipboard, and limiting features to retrieve pertinent botanical research are described. Tables containing MeSH terms for medicinal plants and useful print and electronic resources are included. [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
- View/download PDF
5. Information-seeking behavior in complementary and alternative medicine (CAM): an online survey of faculty at a health sciences campus.
- Author
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Owen DJ and Fang ME
- Abstract
BACKGROUND: The amount of reliable information available for complementary and alternative medicine (CAM) is limited, and few authoritative resources are available. OBJECTIVE: The objective is to investigate the information-seeking behavior of health professionals seeking CAM information. METHODS: Data were gathered using a Web-based questionnaire made available to health sciences faculty affiliated with the University of California, San Francisco. RESULTS: The areas of greatest interest were herbal medicine (67%), relaxation exercises (53%), and acupuncture (52%). About half the respondents perceived their CAM searches as being only partially successful. Eighty-two percent rated MEDLINE as a useful resource, 46% personal contacts with colleagues, 46% the Web, 40% journals, and 20% textbooks. Books and databases most frequently cited as useful had information about herbs. The largest group of respondents was in internal medicine (26%), though 15% identified their specialties as psychiatry, psychology, behavioral medicine, or addiction medicine. There was no correlation between specialty and patterns of information-seeking behavior. Sixty-six percent expressed an interest in learning more about CAM resources. CONCLUSIONS: Health professionals are frequently unable to locate the CAM information they need, and the majority have little knowledge of existing CAM resources, relying instead on MEDLINE. Medical librarians need to educate health professionals in the identification and use of authoritative CAM resources. [ABSTRACT FROM AUTHOR]
- Published
- 2003
6. Using personal reprint management software to teach information management skills for the electronic library.
- Author
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Owen DJ
- Abstract
The growing electronic library now provides researchers, students and clinicians with ready access to a wide range of useful electronic information sources which can augment, and increasingly replace, the traditional print versions. As a result of this, medical researchers and health professionals are turning to librarians for guidance in the effective organization, and manipulation of personal information collections. Many library instruction programs have responded to this need by providing instruction in information management, including the use of microcomputer-based personal reprint management applications. The focus of this paper is how a class centered around this software can be an ideal format for introducing more users to much broader issues of personal information management skills in the electronic era. [ABSTRACT FROM AUTHOR]
- Published
- 1997
- Full Text
- View/download PDF
7. Dual Function of the pUL7-pUL51 Tegument Protein Complex in Herpes Simplex Virus 1 Infection
- Author
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Albecka, A, Owen, DJ, Ivanova, L, Brun, J, Liman, R, Davies, L, Ahmed, MF, Colaco, S, Hollinshead, M, Graham, SC, and Crump, CM
- Subjects
human herpesviruses ,UL7 ,tegument ,viruses ,UL51 ,focal adhesion ,herpes simplex virus ,3. Good health - Abstract
The tegument of herpesviruses is a highly complex structural layer between the nucleocapsid and the envelope of virions. Tegument proteins play both structural and regulatory functions during replication and spread, but the interactions and functions of many of these proteins are poorly understood. Here we focus on two tegument proteins from herpes simplex virus 1 (HSV-1), pUL7 and pUL51, which have homologues in all other herpesviruses. We have now identified that HSV-1 pUL7 and pUL51 form a stable and direct protein-protein interaction, their expression levels rely on the presence of each other, and they function as a complex in infected cells. We demonstrate that expression of the pUL7-pUL51 complex is important for efficient HSV-1 assembly and plaque formation. Furthermore, we also discovered that the pUL7-pUL51 complex localizes to focal adhesions at the plasma membrane in both infected cells and in the absence of other viral proteins. The expression of pUL7-pUL51 is important to stabilize focal adhesions and maintain cell morphology in infected cells and cells infected with viruses lacking pUL7 and/or pUL51 round up more rapidly than cells infected with wild-type HSV-1. Our data suggest that, in addition to the previously reported functions in virus assembly and spread for pUL51, the pUL7-pUL51 complex is important for maintaining the attachment of infected cells to their surroundings through modulating the activity of focal adhesion complexes. $\textbf{IMPORTANCE}$: The $\textit{Herpesviridae }$ is a large family of highly successful human and animal pathogens. Virions of these viruses are composed of many different proteins, most of which are contained within the tegument, a complex structural layer between the nucleocapsid and the envelope within virus particles. Tegument proteins have important roles in assembling virus particles as well as modifying host cells to promote virus replication and spread. However, little is known about the function of many tegument proteins during virus replication. Our study focuses on two tegument proteins from herpes simplex virus 1 that are conserved in all herpesviruses: pUL7 and pUL51. We demonstrate that these proteins directly interact and form a functional complex that is important for both virus assembly and modulation of host cell morphology. Further, we identify for the first time that these conserved herpesvirus tegument proteins localize to focal adhesions in addition to cytoplasmic juxtanuclear membranes within infected cells.
8. Cargo selective vesicle tethering: The structural basis for binding of specific cargo proteins by the Golgi tether component TBC1D23.
- Author
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Cattin-Ortolá J, Kaufman JGG, Gillingham AK, Wagstaff JL, Peak-Chew SY, Stevens TJ, Boulanger J, Owen DJ, and Munro S
- Subjects
- Golgi Matrix Proteins metabolism, Biological Transport, Endosomes metabolism, Protein Binding, Membrane Proteins metabolism, Golgi Apparatus metabolism
- Abstract
The Golgi-localized golgins golgin-97 and golgin-245 capture transport vesicles arriving from endosomes via the protein TBC1D23. The amino-terminal domain of TBC1D23 binds to the golgins, and the carboxyl-terminal domain of TBC1D23 captures the vesicles, but how it recognizes specific vesicles was unclear. A search for binding partners of the carboxyl-terminal domain unexpectedly revealed direct binding to carboxypeptidase D and syntaxin-16, known cargo proteins of the captured vesicles. Binding is via a threonine-leucine-tyrosine (TLY) sequence present in both proteins next to an acidic cluster. A crystal structure reveals how this acidic TLY motif binds to TBC1D23. An acidic TLY motif is also present in the tails of other endosome-to-Golgi cargo, and these also bind TBC1D23. Structure-guided mutations in the carboxyl-terminal domain that disrupt motif binding in vitro also block vesicle capture in vivo. Thus, TBC1D23 attached to golgin-97 and golgin-245 captures vesicles by a previously undescribed mechanism: the recognition of a motif shared by cargo proteins carried by the vesicle.
- Published
- 2024
- Full Text
- View/download PDF
9. Repurposing an endogenous degradation domain for antibody-mediated disposal of cell-surface proteins.
- Author
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Schmitt J, Poole E, Groves I, Owen DJ, Graham SC, Sinclair J, and Kelly BT
- Subjects
- Humans, Proprotein Convertases metabolism, Membrane Proteins, Receptors, LDL metabolism, Proprotein Convertase 9 metabolism, Serine Endopeptidases
- Abstract
The exquisite specificity of antibodies can be harnessed to effect targeted degradation of membrane proteins. Here, we demonstrate targeted protein removal utilising a protein degradation domain derived from the endogenous human protein Proprotein Convertase Subtilisin/Kexin type 9 (PCSK9). Recombinant antibodies genetically fused to this domain drive the degradation of membrane proteins that undergo constitutive internalisation and recycling, including the transferrin receptor and the human cytomegalovirus latency-associated protein US28. We term this approach PACTAC (PCSK9-Antibody Clearance-Targeting Chimeras)., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
10. ZMYM2 controls human transposable element transcription through distinct co-regulatory complexes.
- Author
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Owen DJ, Aguilar-Martinez E, Ji Z, Li Y, and Sharrocks AD
- Subjects
- Humans, Zinc Fingers, Chromatin, Co-Repressor Proteins, DNA-Binding Proteins, Transcription Factors, DNA Transposable Elements, Retroelements
- Abstract
ZMYM2 is a zinc finger transcriptional regulator that plays a key role in promoting and maintaining cell identity. It has been implicated in several diseases such as congenital anomalies of the kidney where its activity is diminished and cancer where it participates in oncogenic fusion protein events. ZMYM2 is thought to function through promoting transcriptional repression and here we provide more evidence to support this designation. Here we studied ZMYM2 function in human cells and demonstrate that ZMYM2 is part of distinct chromatin-bound complexes including the established LSD1-CoREST-HDAC1 corepressor complex. We also identify new functional and physical interactions with ADNP and TRIM28/KAP1. The ZMYM2-TRIM28 complex forms in a SUMO-dependent manner and is associated with repressive chromatin. ZMYM2 and TRIM28 show strong functional similarity and co-regulate a large number of genes. However, there are no strong links between ZMYM2-TRIM28 binding events and nearby individual gene regulation. Instead, ZMYM2-TRIM28 appears to regulate genes in a more regionally defined manner within TADs where it can directly regulate co-associated retrotransposon expression. We find that different types of ZMYM2 binding complex associate with and regulate distinct subclasses of retrotransposons, with ZMYM2-ADNP complexes at SINEs and ZMYM2-TRIM28 complexes at LTR elements. We propose a model whereby ZMYM2 acts directly through retrotransposon regulation, which may then potentially affect the local chromatin environment and associated coding gene expression., Competing Interests: DO, EA, ZJ, YL, AS No competing interests declared, (© 2023, Owen, Aguilar-Martinez, Ji et al.)
- Published
- 2023
- Full Text
- View/download PDF
11. Engineering phosphatidylinositol-4,5-bisphosphate model membranes enriched in endocytic cargo: A neutron reflectometry, AFM and QCM-D structural study.
- Author
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Pereira D, Santamaria A, Pawar N, Carrascosa-Tejedor J, Sardo M, Mafra L, Guzmán E, Owen DJ, Zaccai NR, Maestro A, and Marín-Montesinos I
- Subjects
- Microscopy, Atomic Force, Lipid Bilayers chemistry, Peptides chemistry, Neutrons, Phosphatidylinositols chemistry, Quartz Crystal Microbalance Techniques methods
- Abstract
The combination of in vitro models of biological membranes based on solid-supported lipid bilayers (SLBs) and of surface sensitive techniques, such as neutron reflectometry (NR), atomic force microscopy (AFM) and quartz crystal microbalance with dissipation monitoring (QCM-D), is well suited to provide quantitative information about molecular level interactions and lipid spatial distributions. In this work, cellular plasma membranes have been mimicked by designing complex SLB, containing phosphatidylinositol 4,5-bisphosphate (PtdIns4,5P
2 ) lipids as well as incorporating synthetic lipo-peptides that simulate the cytoplasmic tails of transmembrane proteins. The QCM-D results revealed that the adsorption and fusion kinetics of PtdIns4,5P2 are highly dependent of Mg2+ . Additionally, it was shown that increasing concentrations of PtdIns4,5P2 leads to the formation of SLBs with higher homogeneity. The presence of PtdIns4,5P2 clusters was visualized by AFM. NR provided important insights about the structural organization of the various components within the SLB, highlighting that the leaflet symmetry of these SLBs is broken by the presence of CD4-derived cargo peptides. Finally, we foresee our study to be a starting point for more sophisticated in vitro models of biological membranes with the incorporation of inositol phospholipids and synthetic endocytic motifs., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. Conflicts of interest The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2023
- Full Text
- View/download PDF
12. Subcutaneous delivery of a dendrimer-BH3 mimetic improves lymphatic uptake and survival in lymphoma.
- Author
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Feeney OM, Ardipradja K, Noi KF, Mehta D, De Rose R, Yuen D, Johnston APR, Kingston L, Ericsson C, Elmore CS, Hufton R, Owen DJ, Ashford MB, and Porter CJH
- Subjects
- Animals, Injections, Subcutaneous, Lymph, Lymphatic System, Mice, Antineoplastic Agents, Dendrimers chemistry, Lymphoma drug therapy
- Abstract
As a malignant tumour of lymphatic origin, B-cell lymphoma represents a significant challenge for drug delivery, where effective therapies must access malignant cells in the blood, organs and lymphatics while avoiding off-target toxicity. Subcutaneous (SC) administration of nanomedicines allows preferential access to both the lymphatic and blood systems and may therefore provide a route to enhanced drug exposure to lymphomas. Here we examine the impact of SC dosing on lymphatic exposure, pharmacokinetics (PK), and efficacy of AZD0466, a small molecule dual Bcl-2/Bcl-xL inhibitor conjugated to a 'DEP®' G5 poly-l-lysine dendrimer. PK studies reveal that the plasma half-life of the dendrimer-drug conjugate is 8-times longer than that of drug alone, providing evidence of slow release from the circulating dendrimer nanocarrier. The SC dosed construct also shows preferential lymphatic transport, with over 50% of the bioavailable dose recovered in thoracic lymph. Increases in dose (up to 400 mg/kg) are well tolerated after SC administration and studies in a model of disseminated lymphoma in mice show that high dose SC treatment outperforms IV administration using doses that lead to similar total plasma exposure (lower peak concentrations but extended exposure after SC). These data show that the DEP® dendrimer can act as a circulating drug depot accessing both the lymphatic and blood circulatory systems. SC administration improves lymphatic exposure and facilitates higher dose administration due to improved tolerability. Higher dose SC administration also results in improved efficacy, suggesting that drug delivery systems that access both plasma and lymph hold significant potential for the treatment of haematological cancers where lymphatic and extranodal dissemination are poor prognostic factors., (Copyright © 2022 Elsevier B.V. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
13. FCHO controls AP2's initiating role in endocytosis through a PtdIns(4,5)P 2 -dependent switch.
- Author
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Zaccai NR, Kadlecova Z, Dickson VK, Korobchevskaya K, Kamenicky J, Kovtun O, Umasankar PK, Wrobel AG, Kaufman JGG, Gray SR, Qu K, Evans PR, Fritzsche M, Sroubek F, Höning S, Briggs JAG, Kelly BT, Owen DJ, and Traub LM
- Abstract
Clathrin-mediated endocytosis (CME) is the main mechanism by which mammalian cells control their cell surface proteome. Proper operation of the pivotal CME cargo adaptor AP2 requires membrane-localized Fer/Cip4 homology domain-only proteins (FCHO). Here, live-cell enhanced total internal reflection fluorescence-structured illumination microscopy shows that FCHO marks sites of clathrin-coated pit (CCP) initiation, which mature into uniform-sized CCPs comprising a central patch of AP2 and clathrin corralled by an FCHO/Epidermal growth factor potential receptor substrate number 15 (Eps15) ring. We dissect the network of interactions between the FCHO interdomain linker and AP2, which concentrates, orients, tethers, and partially destabilizes closed AP2 at the plasma membrane. AP2's subsequent membrane deposition drives its opening, which triggers FCHO displacement through steric competition with phosphatidylinositol 4,5-bisphosphate, clathrin, cargo, and CME accessory factors. FCHO can now relocate toward a CCP's outer edge to engage and activate further AP2s to drive CCP growth/maturation.
- Published
- 2022
- Full Text
- View/download PDF
14. A BLOC-1-AP-3 super-complex sorts a cis-SNARE complex into endosome-derived tubular transport carriers.
- Author
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Bowman SL, Le L, Zhu Y, Harper DC, Sitaram A, Theos AC, Sviderskaya EV, Bennett DC, Raposo-Benedetti G, Owen DJ, Dennis MK, and Marks MS
- Subjects
- Endosomes genetics, Humans, Melanocytes metabolism, Melanosomes genetics, Protein Transport genetics, Adaptor Protein Complex 3 genetics, Adaptor Protein Complex delta Subunits genetics, Nerve Tissue Proteins genetics, Qa-SNARE Proteins genetics, R-SNARE Proteins genetics
- Abstract
Membrane transport carriers fuse with target membranes through engagement of cognate vSNAREs and tSNAREs on each membrane. How vSNAREs are sorted into transport carriers is incompletely understood. Here we show that VAMP7, the vSNARE for fusing endosome-derived tubular transport carriers with maturing melanosomes in melanocytes, is sorted into transport carriers in complex with the tSNARE component STX13. Sorting requires either recognition of VAMP7 by the AP-3δ subunit of AP-3 or of STX13 by the pallidin subunit of BLOC-1, but not both. Consequently, melanocytes expressing both AP-3δ and pallidin variants that cannot bind their respective SNARE proteins are hypopigmented and fail to sort BLOC-1-dependent cargo, STX13, or VAMP7 into transport carriers. However, SNARE binding does not influence BLOC-1 function in generating tubular transport carriers. These data reveal a novel mechanism of vSNARE sorting by recognition of redundant sorting determinants on a SNARE complex by an AP-3-BLOC-1 super-complex., (© 2021 Bowman et al.)
- Published
- 2021
- Full Text
- View/download PDF
15. Architecture and mechanism of metazoan retromer:SNX3 tubular coat assembly.
- Author
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Leneva N, Kovtun O, Morado DR, Briggs JAG, and Owen DJ
- Abstract
Retromer is a master regulator of cargo retrieval from endosomes, which is critical for many cellular processes including signaling, immunity, neuroprotection, and virus infection. The retromer core (VPS26/VPS29/VPS35) is present on cargo-transporting, tubular carriers along with a range of sorting nexins. Here, we elucidate the structural basis of membrane tubulation and coupled cargo recognition by metazoan and fungal retromer coats assembled with the non-Bin1/Amphiphysin/Rvs (BAR) sorting nexin SNX3 using cryo-electron tomography. The retromer core retains its arched, scaffolding structure but changes its mode of membrane recruitment when assembled with different SNX adaptors, allowing cargo recognition at subunit interfaces. Thus, membrane bending and cargo incorporation can be modulated to allow retromer to traffic cargoes along different cellular transport routes., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY).)
- Published
- 2021
- Full Text
- View/download PDF
16. Linton Mark Traub (1962-2020).
- Author
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Aridor M and Owen DJ
- Published
- 2021
- Full Text
- View/download PDF
17. Design and optimisation of dendrimer-conjugated Bcl-2/x L inhibitor, AZD0466, with improved therapeutic index for cancer therapy.
- Author
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Patterson CM, Balachander SB, Grant I, Pop-Damkov P, Kelly B, McCoull W, Parker J, Giannis M, Hill KJ, Gibbons FD, Hennessy EJ, Kemmitt P, Harmer AR, Gales S, Purbrick S, Redmond S, Skinner M, Graham L, Secrist JP, Schuller AG, Wen S, Adam A, Reimer C, Cidado J, Wild M, Gangl E, Fawell SE, Saeh J, Davies BR, Owen DJ, and Ashford MB
- Subjects
- Animals, Dogs, Female, Humans, Male, Mice, Mice, Inbred C57BL, Mice, SCID, Neoplasms metabolism, Neoplasms pathology, Proto-Oncogene Proteins c-bcl-2 antagonists & inhibitors, Rats, Rats, Wistar, Therapeutic Index, Tumor Cells, Cultured, Xenograft Model Antitumor Assays, bcl-X Protein antagonists & inhibitors, Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Antineoplastic Agents pharmacokinetics, Antineoplastic Agents therapeutic use, Dendrimers chemical synthesis, Dendrimers chemistry, Dendrimers pharmacokinetics, Dendrimers therapeutic use, Neoplasms drug therapy
- Abstract
Dual Bcl-2/Bcl-x
L inhibitors are expected to deliver therapeutic benefit in many haematological and solid malignancies, however, their use is limited by tolerability issues. AZD4320, a potent dual Bcl-2/Bcl-xL inhibitor, has shown good efficacy however had dose limiting cardiovascular toxicity in preclinical species, coupled with challenging physicochemical properties, which prevented its clinical development. Here, we describe the design and development of AZD0466, a drug-dendrimer conjugate, where AZD4320 is chemically conjugated to a PEGylated poly-lysine dendrimer. Mathematical modelling was employed to determine the optimal release rate of the drug from the dendrimer for maximal therapeutic index in terms of preclinical anti-tumour efficacy and cardiovascular tolerability. The optimised candidate is shown to be efficacious and better tolerated in preclinical models compared with AZD4320 alone. The AZD4320-dendrimer conjugate (AZD0466) identified, through mathematical modelling, has resulted in an improved therapeutic index and thus enabled progression of this promising dual Bcl-2/Bcl-xL inhibitor into clinical development.- Published
- 2021
- Full Text
- View/download PDF
18. Mechanism and evolution of the Zn-fingernail required for interaction of VARP with VPS29.
- Author
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Crawley-Snowdon H, Yang JC, Zaccai NR, Davis LJ, Wartosch L, Herman EK, Bright NA, Swarbrick JS, Collins BM, Jackson LP, Seaman MNJ, Luzio JP, Dacks JB, Neuhaus D, and Owen DJ
- Subjects
- Cryoelectron Microscopy, Cysteine chemistry, GTPase-Activating Proteins chemistry, GTPase-Activating Proteins metabolism, Guanine Nucleotide Exchange Factors genetics, HeLa Cells, Humans, Magnetic Resonance Spectroscopy, Models, Molecular, Multiprotein Complexes chemistry, Multiprotein Complexes metabolism, Protein Conformation, Vesicular Transport Proteins genetics, Zinc Fingers, Evolution, Molecular, Guanine Nucleotide Exchange Factors chemistry, Guanine Nucleotide Exchange Factors metabolism, Vesicular Transport Proteins chemistry, Vesicular Transport Proteins metabolism, Zinc metabolism
- Abstract
VARP and TBC1D5 are accessory/regulatory proteins of retromer-mediated retrograde trafficking from endosomes. Using an NMR/X-ray approach, we determined the structure of the complex between retromer subunit VPS29 and a 12 residue, four-cysteine/Zn
++ microdomain, which we term a Zn-fingernail, two of which are present in VARP. Mutations that abolish VPS29:VARP binding inhibit trafficking from endosomes to the cell surface. We show that VARP and TBC1D5 bind the same site on VPS29 and can compete for binding VPS29 in vivo. The relative disposition of VPS29s in hetero-hexameric, membrane-attached, retromer arches indicates that VARP will prefer binding to assembled retromer coats through simultaneous binding of two VPS29s. The TBC1D5:VPS29 interaction is over one billion years old but the Zn-fingernail appears only in VARP homologues in the lineage directly giving rise to animals at which point the retromer/VARP/TBC1D5 regulatory network became fully established.- Published
- 2020
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19. Mutations of the Transcriptional Corepressor ZMYM2 Cause Syndromic Urinary Tract Malformations.
- Author
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Connaughton DM, Dai R, Owen DJ, Marquez J, Mann N, Graham-Paquin AL, Nakayama M, Coyaud E, Laurent EMN, St-Germain JR, Blok LS, Vino A, Klämbt V, Deutsch K, Wu CW, Kolvenbach CM, Kause F, Ottlewski I, Schneider R, Kitzler TM, Majmundar AJ, Buerger F, Onuchic-Whitford AC, Youying M, Kolb A, Salmanullah D, Chen E, van der Ven AT, Rao J, Ityel H, Seltzsam S, Rieke JM, Chen J, Vivante A, Hwang DY, Kohl S, Dworschak GC, Hermle T, Alders M, Bartolomaeus T, Bauer SB, Baum MA, Brilstra EH, Challman TD, Zyskind J, Costin CE, Dipple KM, Duijkers FA, Ferguson M, Fitzpatrick DR, Fick R, Glass IA, Hulick PJ, Kline AD, Krey I, Kumar S, Lu W, Marco EJ, Wentzensen IM, Mefford HC, Platzer K, Povolotskaya IS, Savatt JM, Shcherbakova NV, Senguttuvan P, Squire AE, Stein DR, Thiffault I, Voinova VY, Somers MJG, Ferguson MA, Traum AZ, Daouk GH, Daga A, Rodig NM, Terhal PA, van Binsbergen E, Eid LA, Tasic V, Rasouly HM, Lim TY, Ahram DF, Gharavi AG, Reutter HM, Rehm HL, MacArthur DG, Lek M, Laricchia KM, Lifton RP, Xu H, Mane SM, Sanna-Cherchi S, Sharrocks AD, Raught B, Fisher SE, Bouchard M, Khokha MK, Shril S, and Hildebrandt F
- Subjects
- Amphibian Proteins antagonists & inhibitors, Amphibian Proteins genetics, Amphibian Proteins metabolism, Animals, Case-Control Studies, Child, Child, Preschool, DNA-Binding Proteins metabolism, Family, Female, Forkhead Transcription Factors metabolism, Heterozygote, Humans, Infant, Larva genetics, Larva growth & development, Larva metabolism, Male, Mice, Mice, Knockout, Morpholinos genetics, Morpholinos metabolism, Pedigree, Protein Binding, Repressor Proteins metabolism, Transcription Factors metabolism, Urinary Tract abnormalities, Urogenital Abnormalities metabolism, Urogenital Abnormalities pathology, Exome Sequencing, Xenopus, DNA-Binding Proteins genetics, Epigenesis, Genetic, Forkhead Transcription Factors genetics, Mutation, Repressor Proteins genetics, Transcription Factors genetics, Urinary Tract metabolism, Urogenital Abnormalities genetics
- Abstract
Congenital anomalies of the kidney and urinary tract (CAKUT) constitute one of the most frequent birth defects and represent the most common cause of chronic kidney disease in the first three decades of life. Despite the discovery of dozens of monogenic causes of CAKUT, most pathogenic pathways remain elusive. We performed whole-exome sequencing (WES) in 551 individuals with CAKUT and identified a heterozygous de novo stop-gain variant in ZMYM2 in two different families with CAKUT. Through collaboration, we identified in total 14 different heterozygous loss-of-function mutations in ZMYM2 in 15 unrelated families. Most mutations occurred de novo, indicating possible interference with reproductive function. Human disease features are replicated in X. tropicalis larvae with morpholino knockdowns, in which expression of truncated ZMYM2 proteins, based on individual mutations, failed to rescue renal and craniofacial defects. Moreover, heterozygous Zmym2-deficient mice recapitulated features of CAKUT with high penetrance. The ZMYM2 protein is a component of a transcriptional corepressor complex recently linked to the silencing of developmentally regulated endogenous retrovirus elements. Using protein-protein interaction assays, we show that ZMYM2 interacts with additional epigenetic silencing complexes, as well as confirming that it binds to FOXP1, a transcription factor that has also been linked to CAKUT. In summary, our findings establish that loss-of-function mutations of ZMYM2, and potentially that of other proteins in its interactome, as causes of human CAKUT, offering new routes for studying the pathogenesis of the disorder., (Copyright © 2020 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.)
- Published
- 2020
- Full Text
- View/download PDF
20. Architecture of the AP2/clathrin coat on the membranes of clathrin-coated vesicles.
- Author
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Kovtun O, Dickson VK, Kelly BT, Owen DJ, and Briggs JAG
- Abstract
Clathrin-mediated endocytosis (CME) is crucial for modulating the protein composition of a cell's plasma membrane. Clathrin forms a cage-like, polyhedral outer scaffold around a vesicle, to which cargo-selecting clathrin adaptors are attached. Adaptor protein complex (AP2) is the key adaptor in CME. Crystallography has shown AP2 to adopt a range of conformations. Here, we used cryo-electron microscopy, tomography, and subtomogram averaging to determine structures, interactions, and arrangements of clathrin and AP2 at the key steps of coat assembly, from AP2 in solution to membrane-assembled clathrin-coated vesicles (CCVs). AP2 binds cargo and PtdIns(4,5) P
2 (phosphatidylinositol 4,5-bisphosphate)-containing membranes via multiple interfaces, undergoing conformational rearrangement from its cytosolic state. The binding mode of AP2 β2 appendage into the clathrin lattice in CCVs and buds implies how the adaptor structurally modulates coat curvature and coat disassembly., (Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY).)- Published
- 2020
- Full Text
- View/download PDF
21. Insights into herpesvirus assembly from the structure of the pUL7:pUL51 complex.
- Author
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Butt BG, Owen DJ, Jeffries CM, Ivanova L, Hill CH, Houghton JW, Ahmed MF, Antrobus R, Svergun DI, Welch JJ, Crump CM, and Graham SC
- Subjects
- HEK293 Cells, HeLa Cells, Herpes Simplex virology, Herpesvirus 1, Human chemistry, Humans, Models, Molecular, Protein Binding, Protein Interaction Domains and Motifs, Protein Structure, Quaternary, Protein Structure, Tertiary, Viral Proteins metabolism, Virus Replication, trans-Golgi Network, Herpesvirus 1, Human physiology, Phosphoproteins chemistry, Phosphoproteins genetics, Viral Matrix Proteins chemistry, Viral Matrix Proteins genetics, Viral Proteins chemistry, Viral Proteins genetics, Virus Assembly
- Abstract
Herpesviruses acquire their membrane envelopes in the cytoplasm of infected cells via a molecular mechanism that remains unclear. Herpes simplex virus (HSV)-1 proteins pUL7 and pUL51 form a complex required for efficient virus envelopment. We show that interaction between homologues of pUL7 and pUL51 is conserved across human herpesviruses, as is their association with trans -Golgi membranes. We characterized the HSV-1 pUL7:pUL51 complex by solution scattering and chemical crosslinking, revealing a 1:2 complex that can form higher-order oligomers in solution, and we solved the crystal structure of the core pUL7:pUL51 heterodimer. While pUL7 adopts a previously-unseen compact fold, the helix-turn-helix conformation of pUL51 resembles the cellular endosomal complex required for transport (ESCRT)-III component CHMP4B and pUL51 forms ESCRT-III-like filaments, suggesting a direct role for pUL51 in promoting membrane scission during virus assembly. Our results provide a structural framework for understanding the role of the conserved pUL7:pUL51 complex in herpesvirus assembly., Competing Interests: BB, DO, CJ, LI, CH, JH, MA, RA, DS, JW, CC, SG No competing interests declared, (© 2020, Butt et al.)
- Published
- 2020
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22. Temporal Ordering in Endocytic Clathrin-Coated Vesicle Formation via AP2 Phosphorylation.
- Author
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Wrobel AG, Kadlecova Z, Kamenicky J, Yang JC, Herrmann T, Kelly BT, McCoy AJ, Evans PR, Martin S, Müller S, Salomon S, Sroubek F, Neuhaus D, Höning S, and Owen DJ
- Published
- 2020
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23. Temporal Ordering in Endocytic Clathrin-Coated Vesicle Formation via AP2 Phosphorylation.
- Author
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Wrobel AG, Kadlecova Z, Kamenicky J, Yang JC, Herrmann T, Kelly BT, McCoy AJ, Evans PR, Martin S, Müller S, Salomon S, Sroubek F, Neuhaus D, Höning S, and Owen DJ
- Subjects
- Adaptor Protein Complex 2 metabolism, Clathrin genetics, Clathrin metabolism, Clathrin-Coated Vesicles genetics, Clathrin-Coated Vesicles metabolism, Coated Pits, Cell-Membrane genetics, Coated Pits, Cell-Membrane metabolism, Humans, Phosphorylation genetics, Protein Binding genetics, Adaptor Protein Complex 2 genetics, Adaptor Protein Complex alpha Subunits genetics, Endocytosis genetics, Sorting Nexins genetics
- Abstract
Clathrin-mediated endocytosis (CME) is key to maintaining the transmembrane protein composition of cells' limiting membranes. During mammalian CME, a reversible phosphorylation event occurs on Thr156 of the μ2 subunit of the main endocytic clathrin adaptor, AP2. We show that this phosphorylation event starts during clathrin-coated pit (CCP) initiation and increases throughout CCP lifetime. μ2Thr156 phosphorylation favors a new, cargo-bound conformation of AP2 and simultaneously creates a binding platform for the endocytic NECAP proteins but without significantly altering AP2's cargo affinity in vitro. We describe the structural bases of both. NECAP arrival at CCPs parallels that of clathrin and increases with μ2Thr156 phosphorylation. In turn, NECAP recruits drivers of late stages of CCP formation, including SNX9, via a site distinct from where NECAP binds AP2. Disruption of the different modules of this phosphorylation-based temporal regulatory system results in CCP maturation being delayed and/or stalled, hence impairing global rates of CME., (Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2019
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24. Reducing Dendrimer Generation and PEG Chain Length Increases Drug Release and Promotes Anticancer Activity of PEGylated Polylysine Dendrimers Conjugated with Doxorubicin via a Cathepsin-Cleavable Peptide Linker.
- Author
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Mehta D, Leong N, McLeod VM, Kelly BD, Pathak R, Owen DJ, Porter CJH, and Kaminskas LM
- Subjects
- A549 Cells, Animals, Cathepsin B chemistry, Drug Delivery Systems, Drug Liberation, Humans, Male, Polyethylene Glycols chemistry, Rats, Cathepsins chemistry, Dendrimers chemistry, Doxorubicin chemistry, Polylysine chemistry
- Abstract
PEGylation typically improves the systemic exposure and tumor biodistribution of polymeric drug delivery systems, but may also restrict enzyme access to peptide-based drug linkers. The impact of dendrimer generation (G4 vs G5) and PEG length (570 vs 1100 Da) on the pharmacokinetics, tumor biodistribution, drug release kinetics, and anticancer activity of a series of PEGylated polylysine dendrimers conjugated with doxorubicin via a cathepsin-B cleavable valine-citrulline linker was therefore investigated in rodents. Although the smallest G4 PEG570 dendrimer showed the most efficient cathepsin-mediated doxorubicin release, systemic exposure and tumor uptake were limited. The largest G5 PEG1100 dendrimer showed good tumor uptake and retention but restricted drug liberation and therefore limited anticancer activity. Superior anticancer activity was achieved using an intermediate sized dendrimer that showed better drug release kinetics, systemic exposure, tumor uptake, and retention. The data suggest that balancing PEG molecular weight and dendrimer size is critical when designing chemotherapeutic dendrimers.
- Published
- 2018
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25. Influence of methods of joint inspection during tibial plateau leveling osteotomy on the radiographic appearance of the patellar tendon.
- Author
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Owen DJ, Manley R, and Casale SA
- Subjects
- Animals, Anterior Cruciate Ligament, Anterior Cruciate Ligament Injuries surgery, Arthroscopy, Body Weight, Dogs, Patella, Patellar Ligament, Postoperative Period, Retrospective Studies, Stifle pathology, Tendinopathy, Tibia, Anterior Cruciate Ligament Injuries veterinary, Dog Diseases surgery, Osteotomy veterinary, Stifle surgery
- Abstract
Objective: To determine the influence of methods of joint inspection during tibial plateau leveling osteotomy (TPLO) on radiographic appearance of the patellar tendon., Study Design: Retrospective study., Animals: Client-owned dogs (191) treated with TPLO (199)., Methods: Data collected from medical records included signalment, weight, duration of anesthesia and surgery, preoperative and postoperative tibial plateau angle (TPA), cranial cruciate ligament status, meniscal status, and meniscal treatment. Method of joint inspection was recorded as (1) arthroscopy (AR), (2) craniomedial parapatellar arthrotomy (CrMA), or (3) caudomedial arthrotomy (CdMA). The radiographic thickness of the patellar tendon (PTT) was measured preoperatively and at 8-12 weeks postoperatively. Radiographic signs of patellar tendonitis were graded as 0-2 on the basis of the severity of changes., Results: Thirty-nine dogs (41 stifles) underwent AR, 86 dogs (87 stifles) underwent CrMA, and 70 dogs (71 stifles) underwent CdMA. Durations of surgery (P < .001) and anesthesia (P < .001) were longer when joints were inspected by AR than by arthrotomies. PTT was greater after AR than after CrMA (P = .004) and CdMA (P < .001). The proportion of dogs with grade 1 or grade 2 PTT was greater after AR (78.04%) than after CrMA (52.87%, P = .0065) and CdMA (28.17%, P < .001)., Conclusion: The PTT was thicker 8-12 weeks after TPLO when stifles were inspected arthroscopically rather than via arthrotomies., Clinical Significance: The method of stifle exploration during TPLO influences the postoperative radiographic appearance of the patellar tendon and may contribute to patellar tendinopathy., (© 2018 The American College of Veterinary Surgeons.)
- Published
- 2018
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26. Structure of the membrane-assembled retromer coat determined by cryo-electron tomography.
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Kovtun O, Leneva N, Bykov YS, Ariotti N, Teasdale RD, Schaffer M, Engel BD, Owen DJ, Briggs JAG, and Collins BM
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- Chaetomium metabolism, Chlamydomonas reinhardtii cytology, Chlamydomonas reinhardtii ultrastructure, Humans, Models, Molecular, Protein Binding, Protein Transport, Sorting Nexins chemistry, Sorting Nexins metabolism, Sorting Nexins ultrastructure, Vesicular Transport Proteins metabolism, Chaetomium chemistry, Chaetomium ultrastructure, Cryoelectron Microscopy, Electron Microscope Tomography, Vesicular Transport Proteins chemistry, Vesicular Transport Proteins ultrastructure
- Abstract
Eukaryotic cells traffic proteins and lipids between different compartments using protein-coated vesicles and tubules. The retromer complex is required to generate cargo-selective tubulovesicular carriers from endosomal membranes
1-3 . Conserved in eukaryotes, retromer controls the cellular localization and homeostasis of hundreds of transmembrane proteins, and its disruption is associated with major neurodegenerative disorders4-7 . How retromer is assembled and how it is recruited to form coated tubules is not known. Here we describe the structure of the retromer complex (Vps26-Vps29-Vps35) assembled on membrane tubules with the bin/amphiphysin/rvs-domain-containing sorting nexin protein Vps5, using cryo-electron tomography and subtomogram averaging. This reveals a membrane-associated Vps5 array, from which arches of retromer extend away from the membrane surface. Vps35 forms the 'legs' of these arches, and Vps29 resides at the apex where it is free to interact with regulatory factors. The bases of the arches connect to each other and to Vps5 through Vps26, and the presence of the same arches on coated tubules within cells confirms their functional importance. Vps5 binds to Vps26 at a position analogous to the previously described cargo- and Snx3-binding site, which suggests the existence of distinct retromer-sorting nexin assemblies. The structure provides insight into the architecture of the coat and its mechanism of assembly, and suggests that retromer promotes tubule formation by directing the distribution of sorting nexin proteins on the membrane surface while providing a scaffold for regulatory-protein interactions.- Published
- 2018
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27. Doxorubicin Conjugation and Drug Linker Chemistry Alter the Intravenous and Pulmonary Pharmacokinetics of a PEGylated Generation 4 Polylysine Dendrimer in Rats.
- Author
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Leong NJ, Mehta D, McLeod VM, Kelly BD, Pathak R, Owen DJ, Porter CJH, and Kaminskas LM
- Subjects
- Administration, Inhalation, Administration, Intravenous, Animals, Antibiotics, Antineoplastic administration & dosage, Antibiotics, Antineoplastic chemistry, Antibiotics, Antineoplastic pharmacokinetics, Cell Survival drug effects, Cell Survival physiology, Dendrimers administration & dosage, Dendrimers pharmacokinetics, Dose-Response Relationship, Drug, Doxorubicin administration & dosage, Doxorubicin pharmacokinetics, Lung drug effects, Male, Polyethylene Glycols administration & dosage, Polyethylene Glycols pharmacokinetics, Polylysine administration & dosage, Polylysine pharmacokinetics, Rats, Rats, Sprague-Dawley, Dendrimers chemistry, Doxorubicin chemistry, Lung metabolism, Polyethylene Glycols chemistry, Polylysine chemistry
- Abstract
PEGylated polylysine dendrimers have demonstrated potential as inhalable drug delivery systems that can improve the treatment of lung cancers. Their treatment potential may be enhanced by developing constructs that display prolonged lung retention, together with good systemic absorption, the capacity to passively target lung tumors from the blood and highly selective, yet rapid liberation in the tumor microenvironment. This study sought to characterize how the nature of cathepsin B-cleavable peptide linkers, used to conjugate doxorubicin (Dox) to a PEGylated (PEG570) G4 polylysine dendrimer, affects drug liberation kinetics and intravenous and pulmonary pharmacokinetics in rats. The construct bearing a self-emolative diglycolic acid-V-Citrulline linker exhibited faster Dox release kinetics compared to constructs bearing self-emolative diglycolic acid-glycine-leucine-phenylalanine-glycine (GLFG), or non-self-emolative glutaric acid-GLFG linkers. The V-Citrulline construct exhibited slower plasma clearance, but faster absorption from the lungs than a GLFG construct, although mucociliary clearance and urinary elimination were unchanged. Dox-conjugation enhanced localization in the bronchoalveolar lavage fluid compared to lung tissue, suggesting that projection of Dox from the dendrimer surface reduced tissue uptake. These data show that the linker chemistry employed to conjugate drugs to PEGylated carriers can affect drug release profiles and systemic and lung disposition., (Copyright © 2018 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.)
- Published
- 2018
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28. Lymphatic transport and lymph node targeting of methotrexate-conjugated PEGylated dendrimers are enhanced by reducing the length of the drug linker or masking interactions with the injection site.
- Author
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Ryan GM, McLeod VM, Mehta D, Kelly BD, Stanislawski PC, Owen DJ, Kaminskas LM, and Porter CJH
- Subjects
- Animals, Antimetabolites, Antineoplastic pharmacokinetics, Drug Delivery Systems, Methotrexate pharmacokinetics, Rats, Antimetabolites, Antineoplastic administration & dosage, Dendrimers chemistry, Drug Carriers chemistry, Lymph Nodes metabolism, Methotrexate administration & dosage, Polyethylene Glycols chemistry
- Abstract
Drug conjugation to dendrimer-based delivery systems has been shown to enhance delivery to the lymphatic system after subcutaneous administration. Dendrimer interaction with components of the interstitium at the injection site, however, may prevent drainage from the injection site. The current study sought to vary the length of a linker employed to conjugate methotrexate (MTX) to a PEGylated dendrimer, in an attempt to reduce MTX interaction with interstitial binding sites and enhance lymphatic drainage. Dendrimers with shorter linkers resulted in higher lymphatic drainage, presumably via shielding of interaction sites by the PEG mantle, but were not retained in lymph nodes. Improved drainage of dendrimers with longer linkers was achieved through coadministration with dextran to mask interactions at the injection site while maintaining retention within the node. Enhanced drug exposure to the lymph node has the potential to enhance the treatment of lymph-node resident cancer metastases., (Copyright © 2017 Elsevier Inc. All rights reserved.)
- Published
- 2017
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29. Effect of increased surface hydrophobicity via drug conjugation on the clearance of inhaled PEGylated polylysine dendrimers.
- Author
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Haque S, McLeod VM, Jones S, Fung S, Whittaker M, McIntosh M, Pouton C, Owen DJ, Porter CJH, and Kaminskas LM
- Subjects
- Animals, Drug Delivery Systems methods, Hydrophobic and Hydrophilic Interactions, Kinetics, Lung metabolism, Male, Metabolic Clearance Rate drug effects, Rats, Rats, Sprague-Dawley, Dendrimers chemistry, Methotrexate chemistry, Polyethylene Glycols chemistry, Polylysine chemistry
- Abstract
PEGylated polylysine dendrimers are attractive and well tolerated inhalable drug delivery platforms that have the potential to control the release, absorption kinetics and lung retention time of conjugated drugs. The clinical application of these systems though, would likely require partial substitution of surface PEG groups with drug molecules that are anticipated to alter their lung clearance kinetics and clearance pathways. In the current study, we therefore evaluated the impact of increased surface hydrophobicity via substitution of 50% surface PEG groups with a model hydrophobic drug (α-carboxyl OtButylated methotrexate) on the lung clearance of a Generation 5 PEGylated polylysine dendrimer in rats. PEG substitution with OtBu-methotrexate accelerated lung clearance of the dendrimer by increasing polylysine scaffold catabolism, improving systemic absorption of the intact dendrimer and low molecular weight products of scaffold catabolism, and enhancing mucociliary clearance. These results suggest that the conjugation of hydrophobic drug on the surface of a PEGylated dendrimer is likely to accelerate lung clearance when compared to a fully PEGylated dendrimer., (Crown Copyright © 2017. Published by Elsevier B.V. All rights reserved.)
- Published
- 2017
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30. Contribution of the clathrin adaptor AP-1 subunit µ1 to acidic cluster protein sorting.
- Author
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Navarro Negredo P, Edgar JR, Wrobel AG, Zaccai NR, Antrobus R, Owen DJ, and Robinson MS
- Subjects
- Adaptor Protein Complex 1 chemistry, Adaptor Protein Complex 1 genetics, Adaptor Protein Complex mu Subunits chemistry, Adaptor Protein Complex mu Subunits genetics, CRISPR-Cas Systems, Flow Cytometry, Gene Knockdown Techniques, Genotype, HEK293 Cells, HIV-1 genetics, HeLa Cells, Histocompatibility Antigens Class I genetics, Histocompatibility Antigens Class I metabolism, Host-Pathogen Interactions, Humans, Models, Molecular, Mutation, Phenotype, Protein Binding, Protein Interaction Domains and Motifs, Protein Transport, Structure-Activity Relationship, Time Factors, Transfection, nef Gene Products, Human Immunodeficiency Virus chemistry, nef Gene Products, Human Immunodeficiency Virus genetics, Adaptor Protein Complex 1 metabolism, Adaptor Protein Complex mu Subunits metabolism, Clathrin-Coated Vesicles metabolism, HIV-1 metabolism, nef Gene Products, Human Immunodeficiency Virus metabolism
- Abstract
Acidic clusters act as sorting signals for packaging cargo into clathrin-coated vesicles (CCVs), and also facilitate down-regulation of MHC-I by HIV-1 Nef. To find acidic cluster sorting machinery, we performed a gene-trap screen and identified the medium subunit (µ1) of the clathrin adaptor AP-1 as a top hit. In µ1 knockout cells, intracellular CCVs still form, but acidic cluster proteins are depleted, although several other CCV components were either unaffected or increased, indicating that cells can compensate for long-term loss of AP-1. In vitro experiments showed that the basic patch on µ1 that interacts with the Nef acidic cluster also contributes to the binding of endogenous acidic cluster proteins. Surprisingly, µ1 mutant proteins lacking the basic patch and/or the tyrosine-based motif binding pocket could rescue the µ1 knockout phenotype completely. In contrast, these mutants failed to rescue Nef-induced down-regulation of MHC class I, suggesting a possible mechanism for attacking the virus while sparing the host cell., (© 2017 Navarro Negredo et al.)
- Published
- 2017
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31. Social stress predicts preterm birth in twin pregnancies.
- Author
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Owen DJ, Wood L, Tomenson B, Creed F, and Neilson JP
- Subjects
- Adult, Anxiety epidemiology, Depression epidemiology, Female, Humans, Pregnancy, Premature Birth diagnosis, Prognosis, Prospective Studies, Life Change Events, Pregnancy, Twin statistics & numerical data, Premature Birth epidemiology, Stress, Psychological blood, Stress, Psychological epidemiology
- Abstract
Objective: To investigate whether stress, anxiety and depression predict preterm birth in twin pregnancies., Methods: A prospective cohort study with a convenience sample of women pregnant with dichorionic, diamniotic twins. They were interviewed at 24-28 weeks using the Life Events and Difficulties Schedule and the Hospital Anxiety and Depression Scale. Corticotrophin-releasing hormone, ACTH and cortisol levels were assessed at 28 weeks. The main outcome was premature delivery; there were 42 preterm and 73 term births., Results: Preterm births (<37 weeks) were predicted by higher levels of social stress: 24/42 (57.1%) of women labouring prematurely and 14/73 (19.2%) of those giving birth at term had experienced a severe life event and/or marked social difficulty in the preceding year (<0.001). In logistic regression controlling for age, anxiety and depression, the experience of a severe life event during the year preceding the interview (OR =15.6; 95%CI: 3.0 to 80.8) and a marked difficulty in a close relationship (OR = 17.8; 95%CI: 1.7 to 192) were the factors predicting preterm birth. Levels of CRH, cortisol and ACTH at 28 weeks were not associated with preterm birth. Of the women whose pregnancy lasted less than 34 weeks (early preterm birth) 15/16 had experienced a severe life event and/or marked social difficulty compared to a third (9/26) of those delivering at 34-36 weeks (late preterm birth) and 14/73 of women whose pregnancy reached term (p < .001)., Conclusion: Experience of severe social stress predicts preterm birth in twin pregnancies.
- Published
- 2017
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32. Erratum: Selective integrin endocytosis is driven by interactions between the integrin α-chain and AP2.
- Author
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De Franceschi N, Arjonen A, Elkhatib N, Denessiouk K, Wrobel AG, Wilson TA, Pouwels J, Montagnac G, Owen DJ, and Ivaska J
- Published
- 2017
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33. Dual Function of the pUL7-pUL51 Tegument Protein Complex in Herpes Simplex Virus 1 Infection.
- Author
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Albecka A, Owen DJ, Ivanova L, Brun J, Liman R, Davies L, Ahmed MF, Colaco S, Hollinshead M, Graham SC, and Crump CM
- Subjects
- Animals, Chlorocebus aethiops, DNA Helicases genetics, DNA Primase genetics, Gene Expression Regulation, Viral, HEK293 Cells, Herpesvirus 1, Human ultrastructure, Humans, Protein Binding, Protein Transport, Vero Cells, Viral Matrix Proteins genetics, Viral Proteins genetics, Virus Assembly, DNA Helicases metabolism, DNA Primase metabolism, Herpes Simplex metabolism, Herpes Simplex virology, Herpesvirus 1, Human physiology, Multiprotein Complexes metabolism, Viral Matrix Proteins metabolism, Viral Proteins metabolism
- Abstract
The tegument of herpesviruses is a highly complex structural layer between the nucleocapsid and the envelope of virions. Tegument proteins play both structural and regulatory functions during replication and spread, but the interactions and functions of many of these proteins are poorly understood. Here we focus on two tegument proteins from herpes simplex virus 1 (HSV-1), pUL7 and pUL51, which have homologues in all other herpesviruses. We have now identified that HSV-1 pUL7 and pUL51 form a stable and direct protein-protein interaction, their expression levels rely on the presence of each other, and they function as a complex in infected cells. We demonstrate that expression of the pUL7-pUL51 complex is important for efficient HSV-1 assembly and plaque formation. Furthermore, we also discovered that the pUL7-pUL51 complex localizes to focal adhesions at the plasma membrane in both infected cells and in the absence of other viral proteins. The expression of pUL7-pUL51 is important to stabilize focal adhesions and maintain cell morphology in infected cells and cells infected with viruses lacking pUL7 and/or pUL51 round up more rapidly than cells infected with wild-type HSV-1. Our data suggest that, in addition to the previously reported functions in virus assembly and spread for pUL51, the pUL7-pUL51 complex is important for maintaining the attachment of infected cells to their surroundings through modulating the activity of focal adhesion complexes., Importance: Herpesviridae is a large family of highly successful human and animal pathogens. Virions of these viruses are composed of many different proteins, most of which are contained within the tegument, a complex structural layer between the nucleocapsid and the envelope within virus particles. Tegument proteins have important roles in assembling virus particles as well as modifying host cells to promote virus replication and spread. However, little is known about the function of many tegument proteins during virus replication. Our study focuses on two tegument proteins from herpes simplex virus 1 that are conserved in all herpesviruses: pUL7 and pUL51. We demonstrate that these proteins directly interact and form a functional complex that is important for both virus assembly and modulation of host cell morphology. Further, we identify for the first time that these conserved herpesvirus tegument proteins localize to focal adhesions in addition to cytoplasmic juxtanuclear membranes within infected cells., (Copyright © 2017 Albecka et al.)
- Published
- 2017
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34. BLOC-1 and BLOC-3 regulate VAMP7 cycling to and from melanosomes via distinct tubular transport carriers.
- Author
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Dennis MK, Delevoye C, Acosta-Ruiz A, Hurbain I, Romao M, Hesketh GG, Goff PS, Sviderskaya EV, Bennett DC, Luzio JP, Galli T, Owen DJ, Raposo G, and Marks MS
- Subjects
- Animals, Cell Membrane metabolism, Cell Membrane ultrastructure, Green Fluorescent Proteins metabolism, Humans, Intracellular Signaling Peptides and Proteins, Melanocytes metabolism, Melanocytes ultrastructure, Melanosomes ultrastructure, Membrane Glycoproteins metabolism, Mice, Inbred C57BL, Mitochondrial Proteins, Oxidoreductases metabolism, Pigmentation, Protein Transport, Qa-SNARE Proteins metabolism, Recombinant Fusion Proteins metabolism, Transport Vesicles ultrastructure, rab GTP-Binding Proteins metabolism, Carrier Proteins metabolism, Endocytosis, Lectins metabolism, Melanosomes metabolism, Nerve Tissue Proteins metabolism, R-SNARE Proteins metabolism, Transport Vesicles metabolism
- Abstract
Endomembrane organelle maturation requires cargo delivery via fusion with membrane transport intermediates and recycling of fusion factors to their sites of origin. Melanosomes and other lysosome-related organelles obtain cargoes from early endosomes, but the fusion machinery involved and its recycling pathway are unknown. Here, we show that the v-SNARE VAMP7 mediates fusion of melanosomes with tubular transport carriers that also carry the cargo protein TYRP1 and that require BLOC-1 for their formation. Using live-cell imaging, we identify a pathway for VAMP7 recycling from melanosomes that employs distinct tubular carriers. The recycling carriers also harbor the VAMP7-binding scaffold protein VARP and the tissue-restricted Rab GTPase RAB38. Recycling carrier formation is dependent on the RAB38 exchange factor BLOC-3. Our data suggest that VAMP7 mediates fusion of BLOC-1-dependent transport carriers with melanosomes, illuminate SNARE recycling from melanosomes as a critical BLOC-3-dependent step, and likely explain the distinct hypopigmentation phenotypes associated with BLOC-1 and BLOC-3 deficiency in Hermansky-Pudlak syndrome variants., (© 2016 Dennis et al.)
- Published
- 2016
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35. Transient Fcho1/2⋅Eps15/R⋅AP-2 Nanoclusters Prime the AP-2 Clathrin Adaptor for Cargo Binding.
- Author
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Ma L, Umasankar PK, Wrobel AG, Lymar A, McCoy AJ, Holkar SS, Jha A, Pradhan-Sundd T, Watkins SC, Owen DJ, and Traub LM
- Subjects
- Adaptor Protein Complex 2 chemistry, Adaptor Proteins, Signal Transducing chemistry, Amino Acid Motifs, Amino Acid Sequence, Animals, Clathrin metabolism, Clathrin-Coated Vesicles metabolism, Endocytosis, Fatty Acid-Binding Proteins, HeLa Cells, Humans, Models, Biological, Models, Molecular, Protein Binding, Protein Domains, Protein Interaction Maps, Rats, Transfection, Adaptor Protein Complex 2 metabolism, Adaptor Proteins, Signal Transducing metabolism, Membrane Proteins metabolism
- Abstract
Clathrin-coated vesicles form by rapid assembly of discrete coat constituents into a cargo-sorting lattice. How the sequential phases of coat construction are choreographed is unclear, but transient protein-protein interactions mediated by short interaction motifs are pivotal. We show that arrayed Asp-Pro-Phe (DPF) motifs within the early-arriving endocytic pioneers Eps15/R are differentially decoded by other endocytic pioneers Fcho1/2 and AP-2. The structure of an Eps15/R⋅Fcho1 μ-homology domain complex reveals a spacing-dependent DPF triad, bound in a mechanistically distinct way from the mode of single DPF binding to AP-2. Using cells lacking FCHO1/2 and with Eps15 sequestered from the plasma membrane, we establish that without these two endocytic pioneers, AP-2 assemblies are fleeting and endocytosis stalls. Thus, distinct DPF-based codes within the unstructured Eps15/R C terminus direct the assembly of temporary Fcho1/2⋅Eps15/R⋅AP-2 ternary complexes to facilitate conformational activation of AP-2 by the Fcho1/2 interdomain linker to promote AP-2 cargo engagement., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
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36. Using selenomethionyl derivatives to assign sequence in low-resolution structures of the AP2 clathrin adaptor.
- Author
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Kelly BT, Graham SC, and Owen DJ
- Subjects
- Animals, Binding Sites, Clathrin metabolism, Crystallization, Crystallography, X-Ray, Endocytosis, Humans, Mice, Models, Molecular, Protein Binding, Protein Conformation, Rats, Adaptor Protein Complex 2 chemistry, Adaptor Protein Complex 2 metabolism, Selenomethionine chemistry
- Abstract
Selenomethionine incorporation is a powerful technique for assigning sequence to regions of electron density at low resolution. Genetic introduction of methionine point mutations and the subsequent preparation and crystallization of selenomethionyl derivatives permits unambiguous sequence assignment by enabling the placement of the anomalous scatterers (Se atoms) thus introduced. Here, the use of this approach in the assignment of sequence in a part of the AP2 clathrin adaptor complex that is responsible for clathrin binding is described. AP2 plays a pivotal role in clathrin-mediated endocytosis, a tightly regulated process in which cell-surface transmembrane proteins are internalized from the plasma membrane by incorporation into lipid-enclosed transport vesicles. AP2 binds cargo destined for internalization and recruits clathrin, a large trimeric protein that helps to deform the membrane to produce the transport vesicle. By selenomethionine labelling of point mutants, it was shown that the clathrin-binding site is buried within a deep cleft of the AP2 complex. A membrane-stimulated conformational change in AP2 releases the clathrin-binding site from autoinhibition, thereby linking clathrin recruitment to membrane localization.
- Published
- 2016
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37. A Comparison of the Pharmacokinetics and Pulmonary Lymphatic Exposure of a Generation 4 PEGylated Dendrimer Following Intravenous and Aerosol Administration to Rats and Sheep.
- Author
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Ryan GM, Bischof RJ, Enkhbaatar P, McLeod VM, Chan LJ, Jones SA, Owen DJ, Porter CJ, and Kaminskas LM
- Subjects
- Administration, Inhalation, Administration, Intravenous, Aerosols administration & dosage, Aerosols chemistry, Aerosols pharmacokinetics, Animals, Dendrimers administration & dosage, Dendrimers chemistry, Drug Carriers administration & dosage, Drug Carriers chemistry, Female, Male, Polyethylene Glycols administration & dosage, Polyethylene Glycols chemistry, Rats, Rats, Sprague-Dawley, Sheep, Dendrimers pharmacokinetics, Drug Carriers pharmacokinetics, Drug Delivery Systems, Lung metabolism, Lymph Nodes metabolism, Polyethylene Glycols pharmacokinetics
- Abstract
Purpose: Cancer metastasis to pulmonary lymph nodes dictates the need to deliver chemotherapeutic and diagnostic agents to the lung and associated lymph nodes. Drug conjugation to dendrimer-based delivery systems has the potential to reduce toxicity, enhance lung retention and promote lymphatic distribution in rats. The current study therefore evaluated the pharmacokinetics and lung lymphatic exposure of a PEGylated dendrimer following inhaled administration., Methods: Plasma pharmacokinetics and disposition of a 22 kDa PEGylated dendrimer were compared after aerosol administration to rats and sheep. Lung-derived lymph could not be sampled in rats and so lymphatic transport of the dendrimer from the lung was assessed in sheep., Results: Higher plasma concentrations were achieved when dendrimer was administered to the lungs of rats as a liquid instillation when compared to an aerosol. Plasma pharmacokinetics were similar between sheep and rats, although some differences in disposition patterns were evident. Unexpectedly, less than 0.5% of the aerosol dose was recovered in pulmonary lymph., Conclusions: The data suggest that rats provide a relevant model for assessing the pharmacokinetics of inhaled macromolecules prior to evaluation in larger animals, but that the pulmonary lymphatics are unlikely to play a major role in the absorption of nanocarriers from the lungs.
- Published
- 2016
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38. Selective integrin endocytosis is driven by interactions between the integrin α-chain and AP2.
- Author
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De Franceschi N, Arjonen A, Elkhatib N, Denessiouk K, Wrobel AG, Wilson TA, Pouwels J, Montagnac G, Owen DJ, and Ivaska J
- Subjects
- Adaptor Protein Complex 2 chemistry, Amino Acid Motifs, Amino Acid Sequence, Cell Adhesion, Cell Movement, Humans, Integrin alpha2 chemistry, Integrin alpha4 chemistry, Models, Molecular, Molecular Sequence Data, Protein Binding, Protein Multimerization, Protein Structure, Tertiary, Sequence Alignment, Adaptor Protein Complex 2 metabolism, Endocytosis, Integrin alpha2 metabolism, Integrin alpha4 metabolism
- Abstract
Integrins are heterodimeric cell-surface adhesion molecules comprising one of 18 possible α-chains and one of eight possible β-chains. They control a range of cell functions in a matrix- and ligand-specific manner. Integrins can be internalized by clathrin-mediated endocytosis (CME) through β subunit-based motifs found in all integrin heterodimers. However, whether specific integrin heterodimers can be selectively endocytosed was unknown. Here, we found that a subset of α subunits contain an evolutionarily conserved and functional YxxΦ motif directing integrins to selective internalization by the most abundant endocytic clathrin adaptor, AP2. We determined the structure of the human integrin α4-tail motif in complex with the AP2 C-μ2 subunit and confirmed the interaction by isothermal titration calorimetry. Mutagenesis of the motif impaired selective heterodimer endocytosis and attenuated integrin-mediated cell migration. We propose that integrins evolved to enable selective integrin-receptor turnover in response to changing matrix conditions., Competing Interests: The authors declare no competing financial interests.
- Published
- 2016
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39. Structural basis for the binding of tryptophan-based motifs by δ-COP.
- Author
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Suckling RJ, Poon PP, Travis SM, Majoul IV, Hughson FM, Evans PR, Duden R, and Owen DJ
- Subjects
- Amino Acid Motifs, COP-Coated Vesicles chemistry, COP-Coated Vesicles genetics, COP-Coated Vesicles metabolism, Calorimetry, Indirect, Cathepsin A chemistry, Cathepsin A genetics, Cathepsin A metabolism, Coatomer Protein genetics, Coatomer Protein metabolism, DNA-Binding Proteins chemistry, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, GTPase-Activating Proteins chemistry, GTPase-Activating Proteins genetics, GTPase-Activating Proteins metabolism, Protein Binding, Protein Structure, Tertiary, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins chemistry, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism, Tryptophan genetics, Tryptophan metabolism, Coatomer Protein chemistry, Saccharomyces cerevisiae chemistry, Tryptophan chemistry
- Abstract
Coatomer consists of two subcomplexes: the membrane-targeting, ADP ribosylation factor 1 (Arf1):GTP-binding βγδζ-COP F-subcomplex, which is related to the adaptor protein (AP) clathrin adaptors, and the cargo-binding αβ'ε-COP B-subcomplex. We present the structure of the C-terminal μ-homology domain of the yeast δ-COP subunit in complex with the WxW motif from its binding partner, the endoplasmic reticulum-localized Dsl1 tether. The motif binds at a site distinct from that used by the homologous AP μ subunits to bind YxxΦ cargo motifs with its two tryptophan residues sitting in compatible pockets. We also show that the Saccharomyces cerevisiae Arf GTPase-activating protein (GAP) homolog Gcs1p uses a related WxxF motif at its extreme C terminus to bind to δ-COP at the same site in the same way. Mutations designed on the basis of the structure in conjunction with isothermal titration calorimetry confirm the mode of binding and show that mammalian δ-COP binds related tryptophan-based motifs such as that from ArfGAP1 in a similar manner. We conclude that δ-COP subunits bind Wxn(1-6)[WF] motifs within unstructured regions of proteins that influence the lifecycle of COPI-coated vesicles; this conclusion is supported by the observation that, in the context of a sensitizing domain deletion in Dsl1p, mutating the tryptophan-based motif-binding site in yeast causes defects in both growth and carboxypeptidase Y trafficking/processing.
- Published
- 2015
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40. Tegument Assembly and Secondary Envelopment of Alphaherpesviruses.
- Author
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Owen DJ, Crump CM, and Graham SC
- Subjects
- Models, Biological, Protein Binding, Viral Structural Proteins metabolism, Alphaherpesvirinae physiology, Virus Assembly
- Abstract
Alphaherpesviruses like herpes simplex virus are large DNA viruses characterized by their ability to establish lifelong latent infection in neurons. As for all herpesviruses, alphaherpesvirus virions contain a protein-rich layer called "tegument" that links the DNA-containing capsid to the glycoprotein-studded membrane envelope. Tegument proteins mediate a diverse range of functions during the virus lifecycle, including modulation of the host-cell environment immediately after entry, transport of virus capsids to the nucleus during infection, and wrapping of cytoplasmic capsids with membranes (secondary envelopment) during virion assembly. Eleven tegument proteins that are conserved across alphaherpesviruses have been implicated in the formation of the tegument layer or in secondary envelopment. Tegument is assembled via a dense network of interactions between tegument proteins, with the redundancy of these interactions making it challenging to determine the precise function of any specific tegument protein. However, recent studies have made great headway in defining the interactions between tegument proteins, conserved across alphaherpesviruses, which facilitate tegument assembly and secondary envelopment. We summarize these recent advances and review what remains to be learned about the molecular interactions required to assemble mature alphaherpesvirus virions following the release of capsids from infected cell nuclei.
- Published
- 2015
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41. A novel disorder reveals clathrin heavy chain-22 is essential for human pain and touch development.
- Author
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Nahorski MS, Al-Gazali L, Hertecant J, Owen DJ, Borner GH, Chen YC, Benn CL, Carvalho OP, Shaikh SS, Phelan A, Robinson MS, Royle SJ, and Woods CG
- Subjects
- Cell Differentiation physiology, Cell Line, Humans, Muscle, Skeletal metabolism, Neurons metabolism, Pain metabolism, Clathrin Heavy Chains genetics, Mutation genetics, Neural Stem Cells cytology, Neurogenesis physiology, Pain genetics, Touch physiology
- Abstract
Congenital inability to feel pain is very rare but the identification of causative genes has yielded significant insights into pain pathways and also novel targets for pain treatment. We report a novel recessive disorder characterized by congenital insensitivity to pain, inability to feel touch, and cognitive delay. Affected individuals harboured a homozygous missense mutation in CLTCL1 encoding the CHC22 clathrin heavy chain, p.E330K, which we demonstrate to have a functional effect on the protein. We found that CLTCL1 is significantly upregulated in the developing human brain, displaying an expression pattern suggestive of an early neurodevelopmental role. Guided by the disease phenotype, we investigated the role of CHC22 in two human neural crest differentiation systems; human induced pluripotent stem cell-derived nociceptors and TRKB-dependant SH-SY5Y cells. In both there was a significant downregulation of CHC22 upon the onset of neural differentiation. Furthermore, knockdown of CHC22 induced neurite outgrowth in neural precursor cells, which was rescued by stable overexpression of small interfering RNA-resistant CHC22, but not by mutant CHC22. Similarly, overexpression of wild-type, but not mutant, CHC22 blocked neurite outgrowth in cells treated with retinoic acid. These results reveal an essential and non-redundant role for CHC22 in neural crest development and in the genesis of pain and touch sensing neurons., (© The Author (2015). Published by Oxford University Press on behalf of the Guarantors of Brain.)
- Published
- 2015
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42. CALM regulates clathrin-coated vesicle size and maturation by directly sensing and driving membrane curvature.
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Miller SE, Mathiasen S, Bright NA, Pierre F, Kelly BT, Kladt N, Schauss A, Merrifield CJ, Stamou D, Höning S, and Owen DJ
- Subjects
- Cell Line, Tumor, Cell Membrane physiology, Endocytosis, Epidermal Growth Factor metabolism, HeLa Cells, Humans, Liposomes metabolism, Protein Structure, Tertiary, R-SNARE Proteins metabolism, RNA Interference, RNA, Small Interfering, Transferrin metabolism, Cell Shape genetics, Clathrin-Coated Vesicles physiology, Coated Pits, Cell-Membrane physiology, Fatty Acid-Binding Proteins genetics, Monomeric Clathrin Assembly Proteins genetics, Monomeric Clathrin Assembly Proteins physiology
- Abstract
The size of endocytic clathrin-coated vesicles (CCVs) is remarkably uniform, suggesting that it is optimized to achieve the appropriate levels of cargo and lipid internalization. The three most abundant proteins in mammalian endocytic CCVs are clathrin and the two cargo-selecting, clathrin adaptors, CALM and AP2. Here we demonstrate that depletion of CALM causes a substantial increase in the ratio of "open" clathrin-coated pits (CCPs) to "necked"/"closed" CCVs and a doubling of CCP/CCV diameter, whereas AP2 depletion has opposite effects. Depletion of either adaptor, however, significantly inhibits endocytosis of transferrin and epidermal growth factor. The phenotypic effects of CALM depletion can be rescued by re-expression of wild-type CALM, but not with CALM that lacks a functional N-terminal, membrane-inserting, curvature-sensing/driving amphipathic helix, the existence and properties of which are demonstrated. CALM is thus a major factor in controlling CCV size and maturation and hence in determining the rates of endocytic cargo uptake., (Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
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43. Methotrexate-conjugated PEGylated dendrimers show differential patterns of deposition and activity in tumor-burdened lymph nodes after intravenous and subcutaneous administration in rats.
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Kaminskas LM, McLeod VM, Ascher DB, Ryan GM, Jones S, Haynes JM, Trevaskis NL, Chan LJ, Sloan EK, Finnin BA, Williamson M, Velkov T, Williams ED, Kelly BD, Owen DJ, and Porter CJ
- Subjects
- Animals, Cell Line, Tumor, Female, Flow Cytometry, Male, Microscopy, Confocal, Neoplasms metabolism, Rats, Rats, Inbred F344, Rats, Sprague-Dawley, Dendrimers chemistry, Dendrimers pharmacokinetics, Lymph Nodes metabolism, Methotrexate chemistry, Methotrexate pharmacokinetics, Polyethylene Glycols chemistry
- Abstract
The current study sought to explore whether the subcutaneous administration of lymph targeted dendrimers, conjugated with a model chemotherapeutic (methotrexate, MTX), was able to enhance anticancer activity against lymph node metastases. The lymphatic pharmacokinetics and antitumor activity of PEGylated polylysine dendrimers conjugated to MTX [D-MTX(OH)] via a tumor-labile hexapeptide linker was examined in rats and compared to a similar system where MTX was α-carboxyl O-tert-butylated [D-MTX(OtBu)]. The latter has previously been shown to exhibit longer plasma circulation times. D-MTX(OtBu) was well absorbed from the subcutaneous injection site via the lymph, and 3 to 4%/g of the dose was retained by sentinel lymph nodes. In contrast, D-MTX(OH) showed limited absorption from the subcutaneous injection site, but absorption was almost exclusively via the lymph. The retention of D-MTX(OH) by sentinel lymph nodes was also significantly elevated (approximately 30% dose/g). MTX alone was not absorbed into the lymph. All dendrimers displayed lower lymph node targeting after intravenous administration. Despite significant differences in the lymph node retention of D-MTX(OH) and D-MTX(OtBu) after subcutaneous and intravenous administration, the growth of lymph node metastases was similarly inhibited. In contrast, the administration of MTX alone did not significantly reduce lymph node tumor growth. Subcutaneous administration of drug-conjugated dendrimers therefore provides an opportunity to improve drug deposition in downstream tumor-burdened lymph nodes. In this case, however, increased lymph node biodistribution did not correlate well with antitumor activity, possibly suggesting constrained drug release at the site of action.
- Published
- 2015
- Full Text
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44. Clathrin adaptors. AP2 controls clathrin polymerization with a membrane-activated switch.
- Author
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Kelly BT, Graham SC, Liska N, Dannhauser PN, Höning S, Ungewickell EJ, and Owen DJ
- Subjects
- Endocytosis, Humans, Phosphatidylinositol 4,5-Diphosphate chemistry, Adaptor Protein Complex 2 chemistry, Adaptor Protein Complex beta Subunits chemistry, Cell Membrane chemistry, Clathrin chemistry, Polymerization
- Abstract
Clathrin-mediated endocytosis (CME) is vital for the internalization of most cell-surface proteins. In CME, plasma membrane-binding clathrin adaptors recruit and polymerize clathrin to form clathrin-coated pits into which cargo is sorted. Assembly polypeptide 2 (AP2) is the most abundant adaptor and is pivotal to CME. Here, we determined a structure of AP2 that includes the clathrin-binding β2 hinge and developed an AP2-dependent budding assay. Our findings suggest that an autoinhibitory mechanism prevents clathrin recruitment by cytosolic AP2. A large-scale conformational change driven by the plasma membrane phosphoinositide phosphatidylinositol 4,5-bisphosphate and cargo relieves this autoinhibition, triggering clathrin recruitment and hence clathrin-coated bud formation. This molecular switching mechanism can couple AP2's membrane recruitment to its key functions of cargo and clathrin binding., (Copyright © 2014, American Association for the Advancement of Science.)
- Published
- 2014
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45. Pulmonary administration of a doxorubicin-conjugated dendrimer enhances drug exposure to lung metastases and improves cancer therapy.
- Author
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Kaminskas LM, McLeod VM, Ryan GM, Kelly BD, Haynes JM, Williamson M, Thienthong N, Owen DJ, and Porter CJ
- Subjects
- Administration, Inhalation, Animals, Antibiotics, Antineoplastic pharmacokinetics, Antibiotics, Antineoplastic therapeutic use, Delayed-Action Preparations, Dendrimers pharmacokinetics, Dendrimers therapeutic use, Doxorubicin administration & dosage, Doxorubicin pharmacokinetics, Doxorubicin therapeutic use, Drug Liberation, Female, Injections, Intravenous, Lung metabolism, Lung pathology, Lung Neoplasms metabolism, Male, Mammary Neoplasms, Experimental metabolism, Mammary Neoplasms, Experimental pathology, Molecular Structure, Rats, Inbred F344, Rats, Sprague-Dawley, Tissue Distribution, Antibiotics, Antineoplastic administration & dosage, Dendrimers administration & dosage, Doxorubicin analogs & derivatives, Drug Delivery Systems, Lung drug effects, Lung Neoplasms drug therapy, Lung Neoplasms secondary, Mammary Neoplasms, Experimental drug therapy
- Abstract
Direct administration of chemotherapeutic drugs to the lungs significantly enhances drug exposure to lung resident cancers and may improve chemotherapy when compared to intravenous administration. Direct inhalation of uncomplexed or unencapsulated cytotoxic drugs, however, leads to bolus release and unacceptable lung toxicity. Here, we explored the utility of a 56kDa PEGylated polylysine dendrimer, conjugated to doxorubicin, to promote the controlled and prolonged exposure of lung-resident cancers to cytotoxic drug. After intratracheal instillation to rats, approximately 60% of the dendrimer was rapidly removed from the lungs (within 24h) via mucociliary clearance and absorption into the blood. This was followed by a slower clearance phase that reflected both absorption from the lungs (bioavailability 10-13%) and biodegradation of the dendrimer scaffold. After 7days, approximately 15% of the dose remained in the lungs. A syngeneic rat model of lung metastasised breast cancer was subsequently employed to compare the anticancer activity of the dendrimer with a doxorubicin solution formulation after intravenous and pulmonary administration. Twice weekly intratracheal instillation of the dendrimer led to a >95% reduction in lung tumour burden after 2weeks in comparison to IV administration of doxorubicin solution which reduced lung tumour burden by only 30-50%. Intratracheal instillation of an equivalent dose of doxorubicin solution led to extensive lung-related toxicity and death withinseveral days of a single dose. The data suggest that PEGylated dendrimers have potential as inhalable drug delivery systems to promote the prolonged exposure of lung-resident cancers to chemotherapeutic drugs and to improve anti-cancer activity., (Crown Copyright © 2014. Published by Elsevier B.V. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
46. VARP is recruited on to endosomes by direct interaction with retromer, where together they function in export to the cell surface.
- Author
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Hesketh GG, Pérez-Dorado I, Jackson LP, Wartosch L, Schäfer IB, Gray SR, McCoy AJ, Zeldin OB, Garman EF, Harbour ME, Evans PR, Seaman MNJ, Luzio JP, and Owen DJ
- Subjects
- Amino Acid Sequence, Blotting, Western, Crystallography, X-Ray, Guanine Nucleotide Exchange Factors chemistry, Guanine Nucleotide Exchange Factors genetics, Guanosine Triphosphate metabolism, HeLa Cells, Humans, Immunoprecipitation, Molecular Sequence Data, Muscle Proteins metabolism, Mutagenesis, Site-Directed, Nuclear Proteins metabolism, Protein Binding, Protein Conformation, Protein Multimerization, Protein Transport, R-SNARE Proteins chemistry, R-SNARE Proteins genetics, Repressor Proteins metabolism, Sequence Homology, Amino Acid, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Vesicular Transport Proteins chemistry, Vesicular Transport Proteins genetics, Cell Membrane metabolism, Endosomes physiology, Glucose Transporter Type 1 metabolism, Guanine Nucleotide Exchange Factors metabolism, R-SNARE Proteins metabolism, Vesicular Transport Proteins metabolism, rab GTP-Binding Proteins metabolism
- Abstract
VARP is a Rab32/38 effector that also binds to the endosomal/lysosomal R-SNARE VAMP7. VARP binding regulates VAMP7 participation in SNARE complex formation and can therefore influence VAMP7-mediated membrane fusion events. Mutant versions of VARP that cannot bind Rab32:GTP, designed on the basis of the VARP ankyrin repeat/Rab32:GTP complex structure described here, unexpectedly retain endosomal localization, showing that VARP recruitment is not dependent on Rab32 binding. We show that recruitment of VARP to the endosomal membrane is mediated by its direct interaction with VPS29, a subunit of the retromer complex, which is involved in trafficking from endosomes to the TGN and the cell surface. Transport of GLUT1 from endosomes to the cell surface requires VARP, VPS29, and VAMP7 and depends on the direct interaction between VPS29 and VARP. Finally, we propose that endocytic cycling of VAMP7 depends on its interaction with VARP and, consequently, also on retromer., (Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2014
- Full Text
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47. PEGylated polylysine dendrimers increase lymphatic exposure to doxorubicin when compared to PEGylated liposomal and solution formulations of doxorubicin.
- Author
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Ryan GM, Kaminskas LM, Bulitta JB, McIntosh MP, Owen DJ, and Porter CJH
- Subjects
- Animals, Antibiotics, Antineoplastic pharmacokinetics, Doxorubicin administration & dosage, Doxorubicin pharmacokinetics, Male, Neoplasms drug therapy, Neoplasms metabolism, Polyethylene Glycols administration & dosage, Polyethylene Glycols pharmacokinetics, Rats, Rats, Sprague-Dawley, Antibiotics, Antineoplastic administration & dosage, Dendrimers chemistry, Doxorubicin analogs & derivatives, Drug Carriers chemistry, Lymphatic System metabolism, Polyethylene Glycols chemistry, Polylysine chemistry
- Abstract
Improved delivery of chemotherapeutic drugs to the lymphatic system has the potential to augment outcomes for cancer therapy by enhancing activity against lymph node metastases. Uptake of small molecule chemotherapeutics into the lymphatic system, however, is limited. Nano-sized drug carriers have the potential to promote access to the lymphatics, but to this point, this has not been examined in detail. The current study therefore evaluated the lymphatic exposure of doxorubicin after subcutaneous and intravenous administration as a simple solution formulation or when formulated as a doxorubicin loaded PEGylated poly-lysine dendrimer (hydrodynamic diameter 12 nm), a PEGylated liposome (100 nm) and various pluronic micellar formulations (~5 nm) to thoracic lymph duct cannulated rats. Plasma and lymph pharmacokinetics were analysed by compartmental pharmacokinetic modelling in S-ADAPT, and Berkeley Madonna software was used to predict the lymphatic exposure of doxorubicin over an extended period of time. The micelle formulations displayed poor in vivo stability, resulting in doxorubicin profiles that were similar to that observed after administration of the doxorubicin solution formulation. In contrast, the dendrimer formulation significantly increased the recovery of doxorubicin in the thoracic lymph after both intravenous and subcutaneous dosing when compared to the solution or micellar formulation. Dendrimer-doxorubicin also resulted in increases in lymphatic doxorubicin concentrations when compared to the liposome formulation, although liposomal doxorubicin did increase lymphatic transport when compared to the solution formulation. Specifically, the dendrimer formulation increased the recovery of doxorubicin in the lymph up to 30 h post dose by up to 685 fold and 3.7 fold when compared to the solution and liposomal formulations respectively. Using the compartmental model to predict lymphatic exposure to longer time periods suggested that doxorubicin exposure to the lymphatic system would ultimately be 9796 times and 6.1 times greater after administration of dendrimer doxorubicin when compared to the solution and liposome formulations respectively. The recovery of doxorubicin in the sentinel lymph nodes draining the subcutaneous injection site was also quantified directly, and consistent with the lymph pharmacokinetic data, lymph node recovery was greatest for the dendrimer formulation (12% of dosed doxorubicin/g node) when compared to the liposome (1.4%/g node) and solution (<1%/g node) formulations. The data suggest that dendrimer-based drug delivery systems have the potential to enhance drug exposure to lymph-based drug targets such as lymphatic metastases., (© 2013.)
- Published
- 2013
- Full Text
- View/download PDF
48. Syntaxin binding mechanism and disease-causing mutations in Munc18-2.
- Author
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Hackmann Y, Graham SC, Ehl S, Höning S, Lehmberg K, Aricò M, Owen DJ, and Griffiths GM
- Subjects
- Animals, Blotting, Western, Crystallization, HEK293 Cells, Humans, Immunohistochemistry, Killer Cells, Natural metabolism, Munc18 Proteins genetics, Munc18 Proteins metabolism, Point Mutation genetics, Protein Binding, Sf9 Cells, Spodoptera, T-Lymphocytes, Cytotoxic metabolism, Evolution, Molecular, Killer Cells, Natural immunology, Lymphohistiocytosis, Hemophagocytic genetics, Models, Molecular, Munc18 Proteins chemistry, Qa-SNARE Proteins metabolism, T-Lymphocytes, Cytotoxic immunology
- Abstract
Mutations in either syntaxin 11 (Stx11) or Munc18-2 abolish cytotoxic T lymphocytes (CTL) and natural killer cell (NK) cytotoxicity, and give rise to familial hemophagocytic lymphohistiocytosis (FHL4 or FHL5, respectively). Although Munc18-2 is known to interact with Stx11, little is known about the molecular mechanisms governing the specificity of this interaction or how in vitro IL-2 activation leads to compensation of CTL and NK cytotoxicity. To understand how mutations in Munc18-2 give rise to disease, we have solved the structure of human Munc18-2 at 2.6 Å resolution and mapped 18 point mutations. The four surface mutations identified (R39P, L130S, E132A, P334L) map exclusively to the predicted syntaxin and soluble N-ethylmaleimide-sensitive factor accessory protein receptor binding sites of Munc18-2. We find that Munc18-2 binds the N-terminal peptide of Stx11 with a ~20-fold higher affinity than Stx3, suggesting a potential role in selective binding. Upon IL-2 activation, levels of Stx3 are increased, favoring Munc18-2 binding when Stx11 is absent. Similarly, Munc18-1, expressed in IL-2-activated CTL, is capable of binding Stx11. These findings provide potential explanations for restoration of Munc18-Stx function and cytotoxicity in IL-2-activated cells.
- Published
- 2013
- Full Text
- View/download PDF
49. Structural basis of Vps33A recruitment to the human HOPS complex by Vps16.
- Author
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Graham SC, Wartosch L, Gray SR, Scourfield EJ, Deane JE, Luzio JP, and Owen DJ
- Subjects
- Binding Sites genetics, Escherichia coli, Humans, Multiprotein Complexes metabolism, Mutation genetics, Species Specificity, Vesicular Transport Proteins metabolism, Models, Molecular, Multiprotein Complexes chemistry, Protein Conformation, Vesicular Transport Proteins chemistry
- Abstract
The multisubunit homotypic fusion and vacuole protein sorting (HOPS) membrane-tethering complex is required for late endosome-lysosome and autophagosome-lysosome fusion in mammals. We have determined the crystal structure of the human HOPS subunit Vps33A, confirming its identity as a Sec1/Munc18 family member. We show that HOPS subunit Vps16 recruits Vps33A to the human HOPS complex and that residues 642-736 are necessary and sufficient for this interaction, and we present the crystal structure of Vps33A in complex with Vps16(642-736). Mutations at the binding interface disrupt the Vps33A-Vps16 interaction both in vitro and in cells, preventing recruitment of Vps33A to the HOPS complex. The Vps33A-Vps16 complex provides a structural framework for studying the association between Sec1/Munc18 proteins and tethering complexes.
- Published
- 2013
- Full Text
- View/download PDF
50. Pulmonary administration of PEGylated polylysine dendrimers: absorption from the lung versus retention within the lung is highly size-dependent.
- Author
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Ryan GM, Kaminskas LM, Kelly BD, Owen DJ, McIntosh MP, and Porter CJ
- Subjects
- Absorption, Animals, Dendrimers administration & dosage, Male, Rats, Rats, Sprague-Dawley, Dendrimers chemistry, Dendrimers pharmacokinetics, Lung metabolism, Polyethylene Glycols chemistry, Polylysine chemistry
- Abstract
The systemic delivery of drugs via the inhaled route is an attractive, needle-free means of improving the systemic exposure of molecules such as peptides and proteins that are poorly absorbed after oral administration. Directed delivery into the lungs also provides a means of increasing drug concentrations at the site of action for lung-specific disease states such as pulmonary infections and lung cancer. The current study has examined the potential utility of PEGylated polylysine dendrimers as pulmonary delivery agents and in particular sought to explore the relationship between dendrimer size and absorption of the intact construct (as a potential systemic delivery mechanism) versus retention within the lungs (as a potential pulmonary depot for controlled local release). Dendrimer absorption from the lungs was inversely correlated with molecular weight, with approximately 20-30% of the dose of relatively small (<22 kDa) dendrimers systemically absorbed compared to only 2% absorption for a larger (78 kDa) PEGylated dendrimer. Increasing the molecular weight of the dendrimers led to slower absorption and more prolonged retention in the lung tissue and bronchoalveolar lavage fluid. Oral administration of the two smaller dendrimers confirmed that oral bioavailability of the PEGylated dendrimers was essentially zero and did not contribute to exposure after pulmonary administration. The smaller PEGylated dendrimers were also degraded in the lungs to low molecular weight products that were subsequently absorbed and excreted via the urine, while the larger constructs showed good stability in the lungs. The data suggest first, that small PEGylated dendrimer-based drug delivery systems may be delivered to the blood via inhalation, providing a more attractive alternative to injections, and second that larger PEGylated dendrimers may be retained in the lungs providing the potential for controlled delivery of medications to the blood or lung tissue.
- Published
- 2013
- Full Text
- View/download PDF
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