22 results on '"Naomi K. Fukagawa"'
Search Results
2. Cross-cutting concepts to transform agricultural research
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Abigail P. Boyd, Yaguang Luo, William P. Kustas, Naomi K. Fukagawa, Autar K. Mattoo, Wade T. Crow, Yakov Pachepsky, Moon S. Kim, Hyun S. Lillehoj, Curtis P. Van Tassell, Howard Zhang, Le Ann Blomberg, Jitender P. Dubey, and Joan K. Lunney
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agricultural transformation ,climate change ,convergence ,health ,food systems ,Nutrition. Foods and food supply ,TX341-641 ,Food processing and manufacture ,TP368-456 - Abstract
Agriculture is an important link to many issues that challenge society today, including adaptation to and mitigation of climate change, food security, and communicable and non-communicable diseases in animals and humans. Transformation of agriculture and food systems has become a priority for a range of federal agencies and global organizations. It is imperative that food and agricultural researchers effectively harness the global convergence of priorities to overcome research “silos” through deep and sustained systemic change. Herein, we identify intersections in federal and global initiatives encompassing climate adaptation and mitigation; human health and nutrition; animal health and welfare; food safety and security; and equity and inclusion. Many agencies and organizations share these priorities, but efforts to address them remain uncoordinated and opportunities for collaboration untapped. Based on the interconnectedness of the identified priority areas, we present a research framework to catalyze agricultural transformation, beginning with the research enterprise. We propose that transformation in agricultural research should incorporate (1) innovation, (2) integration, (3) implementation, and (4) evaluation. This framework provides approaches for food and agricultural research to contribute to sustainable, flexible, and coordinated transformation in the agricultural sector.
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- 2023
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3. Associations among Milk Microbiota, Milk Fatty Acids, Milk Glycans, and Inflammation from Lactating Holstein Cows
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Laurynne C. Coates, Sierra D. Durham, David H. Storms, Andrew D. Magnuson, Diane L. Van Hekken, Benjamin M. Plumier, John W. Finley, Naomi K. Fukagawa, Peggy M. Tomasula, Danielle G. Lemay, Matthew J. Picklo, Daniela Barile, Kenneth F. Kalscheur, and Mary E. Kable
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milk microbiota ,milk oligosaccharide ,milk fatty acid ,bovine ,somatic cell count ,inflammation ,Microbiology ,QR1-502 - Abstract
ABSTRACT Milk oligosaccharides (MOs) can be prebiotic and antiadhesive, while fatty acids (MFAs) can be antimicrobial. Both have been associated with milk microbes or mammary gland inflammation in humans. Relationships between these milk components and milk microbes or inflammation have not been determined for cows and could help elucidate a novel approach for the dairy industry to promote desired milk microbial composition for improvement of milk quality and reduction of milk waste. We aimed to determine relationships among milk microbiota, MFAs, MOs, lactose, and somatic cell counts (SCC) from Holstein cows, using our previously published data. Raw milk samples were collected at three time points, ranging from early to late lactation. Data were analyzed using linear mixed-effects modeling and repeated-measures correlation. Unsaturated MFA and short-chain MFA had mostly negative relationships with potentially pathogenic genera, including Corynebacterium, Pseudomonas, and an unknown Enterobacteriaceae genus but numerous positive relationships with symbionts Bifidobacterium and Bacteroides. Conversely, many MOs were positively correlated with potentially pathogenic genera (e.g., Corynebacterium, Enterococcus, and Pseudomonas), and numerous MOs were negatively correlated with the symbiont Bifidobacterium. The neutral, nonfucosylated MO composed of eight hexoses had a positive relationship with SCC, while lactose had a negative relationship with SCC. One interpretation of these trends might be that in milk, MFAs disrupt primarily pathogenic bacterial cells, causing a relative increase in abundance of beneficial microbial taxa, while MOs respond to and act on pathogenic taxa primarily through antiadhesive methods. Further research is needed to confirm the potential mechanisms driving these correlations. IMPORTANCE Bovine milk can harbor microbes that cause mastitis, milk spoilage, and foodborne illness. Fatty acids found in milk can be antimicrobial and milk oligosaccharides can have antiadhesive, prebiotic, and immune-modulatory effects. Relationships among milk microbes, fatty acids, oligosaccharides, and inflammation have been reported for humans. To our knowledge, associations among the milk microbial composition, fatty acids, oligosaccharides, and lactose have not been reported for healthy lactating cows. Identifying these potential relationships in bovine milk will inform future efforts to characterize direct and indirect interactions of the milk components with the milk microbiota. Since many milk components are associated with herd management practices, determining if these milk components impact milk microbes may provide valuable information for dairy cow management and breeding practices aimed at minimizing harmful and spoilage-causing microbes in raw milk.
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- 2023
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4. Ultrafine particles altered gut microbial population and metabolic profiles in a sex-specific manner in an obese mouse model
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Kundi Yang, Mengyang Xu, Jingyi Cao, Qi Zhu, Monica Rahman, Britt A. Holmén, Naomi K. Fukagawa, and Jiangjiang Zhu
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Medicine ,Science - Abstract
Abstract Emerging evidence has highlighted the connection between exposure to air pollution and the increased risk of obesity, metabolic syndrome, and comorbidities. Given the recent interest in studying the effects of ultrafine particle (UFP) on the health of obese individuals, this study examined the effects of gastrointestinal UFP exposure on gut microbial composition and metabolic function using an in vivo murine model of obesity in both sexes. UFPs generated from light-duty diesel engine combustion of petrodiesel (B0) and a petrodiesel/biodiesel fuel blend (80:20 v/v, B20) were administered orally. Multi-omics approaches, including liquid chromatography–mass spectrometry (LC–MS) based targeted metabolomics and 16S rRNA gene sequence analysis, semi-quantitatively compared the effects of 10-day UFP exposures on obese C57B6 mouse gut microbial population, changes in diversity and community function compared to a phosphate buffer solution (PBS) control group. Our results show that sex-specific differences in the gut microbial population in response to UFP exposure can be observed, as UFPs appear to have a differential impact on several bacterial families in males and females. Meanwhile, the alteration of seventy-five metabolites from the gut microbial metabolome varied significantly (ANOVA p
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- 2021
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5. Increased palmitate intake: higher acylcarnitine concentrations without impaired progression of β-oxidation1[S]
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C.Lawrence Kien, Dwight E. Matthews, Matthew E. Poynter, Janice Y. Bunn, Naomi K. Fukagawa, Karen I. Crain, David B. Ebenstein, Emily K. Tarleton, Robert D. Stevens, Timothy R. Koves, and Deborah M. Muoio
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dehydrogenases ,diet and dietary lipids ,fatty acid ,fatty acid/oxidation ,inflammation ,lipids/oxidation ,Biochemistry ,QD415-436 - Abstract
Palmitic acid (PA) is associated with higher blood concentrations of medium-chain acylcarnitines (MCACs), and we hypothesized that PA may inhibit progression of FA β-oxidation. Using a cross-over design, 17 adults were fed high PA (HPA) and low PA/high oleic acid (HOA) diets, each for 3 weeks. The [1-13C]PA and [13-13C]PA tracers were administered with food in random order with each diet, and we assessed PA oxidation (PA OX) and serum AC concentration to determine whether a higher PA intake promoted incomplete PA OX. Dietary PA was completely oxidized during the HOA diet, but only about 40% was oxidized during the HPA diet. The [13-13C]PA/[1-13C]PA ratio of PA OX had an approximate value of 1.0 for either diet, but the ratio of the serum concentrations of MCACs to long-chain ACs (LCACs) was significantly higher during the HPA diet. Thus, direct measurement of PA OX did not confirm that the HPA diet caused incomplete PA OX, despite the modest, but statistically significant, increase in the ratio of MCACs to LCACs in blood.
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- 2015
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6. Walking the Talk of Food Systems at a Small Land-Grant University: Overcoming Process Barriers to a Transdisciplinary Approach
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Jane Kolodinsky, Naomi K. Fukagawa, Erin Roche, Cynthia Belliveau, and Haylley Johnson
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Community Partners ,Food Systems ,Higher Education ,Higher Education Challenge Grant ,Organizational Development ,Transdisciplinary ,Agriculture ,Human settlements. Communities ,HT51-65 - Abstract
In this paper we present the evolution of a transdisciplinary food systems (FS) initiative at a small land-grant university. The first indication of the relevance of food systems study at this university came from faculty and students, which then progressed to the establishment of structural changes and financial support by the administration. This commentary demonstrates that successfully incorporating transdisciplinary academic support, research, and educational programs is not an easy endeavor and requires multilevel buy-in from all strata within the organization. This approach also takes substantial time and resource commitment from faculty, staff, students, administration, and the community. If approached in a holistic, transdisciplinary manner, FS initiatives will link what universities do best with improvement in the FS continuum from food production to public health. As with most new initiatives, there are both barriers and triggers to success, and work is ongoing. Using the lens of the University of Vermont (UVM), this paper poses questions and provides best practice advice to others who seek collaboration across disciplines that goes beyond inter- or multidisciplinarity collaboration.
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- 2016
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7. Combining the effects of increased atmospheric carbon dioxide on protein, iron, and zinc availability and projected climate change on global diets: a modelling study
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Robert H Beach, PhD, Timothy B Sulser, MS, Allison Crimmins, MS, Nicola Cenacchi, MSc, Jefferson Cole, MA, Naomi K Fukagawa, PhD, Daniel Mason-D'Croz, MA, Samuel Myers, MD, Marcus C Sarofim, PhD, Matthew Smith, PhD, and Lewis H Ziska, PhD
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Environmental sciences ,GE1-350 - Abstract
Summary: Background: Increasing atmospheric concentrations of carbon dioxide (CO2) affect global nutrition via effects on agricultural productivity and nutrient content of food crops. We combined these effects with economic projections to estimate net changes in nutrient availability between 2010 and 2050. Methods: In this modelling study, we used the International Model for Policy Analysis of Agricultural Commodities and Trade to project per capita availability of protein, iron, and zinc in 2050. We used estimated changes in productivity of individual agricultural commodities to model effects on production, trade, prices, and consumption under moderate and high greenhouse gas emission scenarios. Two independent sources of data, which used different methodologies to determine the effect of increased atmospheric CO2 on different key crops, were combined with the modelled food supply results to estimate future nutrient availability. Findings: Although technological change, market responses, and the effects of CO2 fertilisation on yield are projected to increase global availability of dietary protein, iron, and zinc, these increases are moderated by negative effects of climate change affecting productivity and carbon penalties on nutrient content. The carbon nutrient penalty results in decreases in the global availability of dietary protein of 4·1%, iron of 2·8%, and zinc of 2·5% as calculated using one dataset, and decreases in global availability of dietary protein of 2·9%, iron of 3·9%, and zinc of 3·4% using the other dataset. The combined effects of projected increases in atmospheric CO2 (ie, carbon nutrient penalty, CO2 fertilisation, and climate effects on productivity) will decrease growth in the global availability of nutrients by 19·5% for protein, 14·4% for iron, and 14·6% for zinc relative to expected technology and market gains by 2050. The many countries that currently have high levels of nutrient deficiency would continue to be disproportionately affected. Interpretation: This approach is an improvement in estimating future global food security by simultaneously projecting climate change effects on crop productivity and changes in nutrient content under increased concentrations of CO2, which accounts for a much larger effect on nutrient availability than CO2 fertilisation. Regardless of the scenario used to project future consumption patterns, the net effect of increasing concentrations of atmospheric CO2 will slow progress in decreasing global nutrient deficiencies. Funding: US Environmental Protection Agency, Consultative Group on International Agricultural Research (CIGAR) Research Program on Policies, Institutions and Markets (PIM), and the CGIAR Research Program on Climate Change and Food Security (CCAFS).
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- 2019
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8. Analytical Chemistry
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Nikita P. Bacalzo, Garret Couture, Ye Chen, Juan J. Castillo, Katherine M. Phillips, Naomi K. Fukagawa, and Carlito B. Lebrilla
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Chromatography ,Liquid ,Polysaccharides ,Tandem Mass Spectrometry ,High Pressure Liquid ,Humans ,Oligosaccharides ,Reproducibility of Results ,Other Chemical Sciences ,Glycomics ,Analytical Chemistry - Abstract
Carbohydrates are the most abundant biomolecules in nature, and specifically, polysaccharides are present in almost all plants and fungi. Due to their compositional diversity, polysaccharide analysis remains challenging. Compared to other biomolecules, high-throughput analysis for carbohydrates has yet to be developed. To address this gap in analytical science, we have developed a multiplexed, high-throughput, and quantitative approach for polysaccharide analysis in foods. Specifically, polysaccharides were depolymerized using a nonenzymatic chemical digestion process followed by oligosaccharide fingerprinting using high performance liquid chromatography-quadru-pole time-of-flight mass spectrometry (HPLC-QTOF-MS). Both label-free relative quantitation and absolute quantitation were done based on the abundances of oligosaccharides produced. Method validation included evaluating recovery for a range of polysaccharide standards and a breakfast cereal standard reference material. Nine polysaccharides (starch, cellulose, beta-glucan, mannan, galactan, arabinan, xylan, xyloglucan, chitin) were successfully quantitated with sufficient accuracy (5-25% bias) and high reproducibility (2- 15% CV). Additionally, the method was used to identify and quantitate polysaccharides from a diverse sample set of food samples. Absolute concentrations of nine polysaccharides from apples and onions were obtained using an external calibration curve, where varietal differences were observed in some of the samples. The methodology developed in this study will provide complementary polysaccharide-level information to deepen our understanding of the interactions of dietary polysaccharides, gut microbial community, and human health. U.S. Department of Agriculture Agricultural Research Service (USDA-ARS) (NACA) [58-8040-0-014]; National Institutes of Health (NIH) Published version This project is funded by the U.S. Department of Agriculture Agricultural Research Service (USDA-ARS) (NACA #58-8040-0-014). Funding from the National Institutes of Health (NIH) is also acknowledged.
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- 2022
9. Valuing the Diversity of Research Methods to Advance Nutrition Science
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Richard D Mattes, Sylvia B Rowe, Sarah D Ohlhorst, Andrew W Brown, Daniel J Hoffman, DeAnn J Liska, Edith J M Feskens, Jaapna Dhillon, Katherine L Tucker, Leonard H Epstein, Lynnette M Neufeld, Michael Kelley, Naomi K Fukagawa, Roger A Sunde, Steven H Zeisel, Anthony J Basile, Laura E Borth, and Emahlea Jackson
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Global Nutrition ,Wereldvoeding ,research ,Nutrition and Dietetics ,translation ,Medicine (miscellaneous) ,methods ,From the American Society for Nutrition ,evidence base ,nutrition science ,precision nutrition ,VLAG ,Food Science - Abstract
The ASN Board of Directors appointed the Nutrition Research Task Force to develop a report on scientific methods used in nutrition science to advance discovery, interpretation, and application of knowledge in the field. The genesis of this report was growing concern about the tone of discourse among nutrition professionals and the implications of acrimony on the productive study and translation of nutrition science. Too often, honest differences of opinion are cast as conflicts instead of areas of needed collaboration. Recognition of the value (and limitations) of contributions from well-executed nutrition science derived from the various approaches used in the discipline, as well as appreciation of how their layering will yield the strongest evidence base, will provide a basis for greater productivity and impact. Greater collaborative efforts within the field of nutrition science will require an understanding that each method or approach has a place and function that should be valued and used together to create the nutrition evidence base. Precision nutrition was identified as an important emerging nutrition topic by the preponderance of task force members, and this theme was adopted for the report because it lent itself to integration of many approaches in nutrition science. Although the primary audience for this report is nutrition researchers and other nutrition professionals, a secondary aim is to develop a document useful for the various audiences that translate nutrition research, including journalists, clinicians, and policymakers. The intent is to promote accurate, transparent, verifiable evidence-based communication about nutrition science. This will facilitate reasoned interpretation and application of emerging findings and, thereby, improve understanding and trust in nutrition science and appropriate characterization, development, and adoption of recommendations.
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- 2022
10. Identification of High and Low Branched-Chain Fatty Acid–Producing Phenotypes in Holstein Cows following High-Forage and Low-Forage Diets in a Crossover Designed Trial
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Matthew J Picklo, Kenneth F Kalscheur, Andrew Magnuson, Michael R Bukowski, James Harnly, Naomi K Fukagawa, and John W Finley
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Nutrition and Dietetics ,food and beverages ,Medicine (miscellaneous) ,Food Science ,Original Research - Abstract
BACKGROUND: Branched-chain fatty acids (BCFAs) are rumen-derived fatty acids comprising ∼2% of bovine-milk fatty acids. BCFAs possess anti-inflammatory properties and enriching the BCFA content of bovine milk may provide human health benefits. OBJECTIVE: We determined whether forage content impacts the BCFA content of milk from Holstein cows and identified fatty acid phenotypes in high vs. low BCFA–containing milks. METHODS: Holstein cows (n = 62), fed for 67 d in a crossover design, consumed a diet with high forage and low concentrate (HF:C) and a diet with low forage and high concentrate (LF:C). Milk samples were collected at the end of each treatment period and fatty acid content determined. Paired t-tests, 1-factor ANOVA, sparse partial least-squares discriminant analysis (sPLSDA), and Pearson's correlation analysis were used to analyze the data. RESULTS: The total milk fatty acid concentration for cows fed the HF:C diet was greater than that of cows fed the LF:C diet (4.2 ± 0.7 g/100 mL vs. 3.9 ± 0.9 g/100 mL). sPLSDA demonstrated separation of the dietary treatments, with BCFAs and odd-chain fatty acids as primary determinants. Total BCFA content in milk fat was elevated by HF:C intake compared with LF:C intake (1.80 vs. 1.68%). Quintile separation of high vs. low BCFA milks resulted in 4 groups: HF:C /low BCFAs, HF:C /high BCFAs; LF:C /low BCFAs, and LF:C /high BCFAs. Milks from the high BCFA quintiles had lower palmitic acid content (29.6% vs. 34.4%) but higher oleic acid content than milks from the low BCFA quintiles (19.7% vs. 17.0%). Some cows were identified as high BCFA producers or low BCFA producers regardless of diet. CONCLUSIONS: BCFA content of milk is diet-sensitive but variation in responses exists. The potential to produce milk with high BCFA content and lower SFA content needs further study.
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- 2022
11. Identification of Branched-Chain Fatty Acid Producing Phenotypes in Holstein Cows
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Matthew J. Picklo, James M. Harnly, Michael R. Bukowski, K. F. Kalscheur, and Naomi K. Fukagawa
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Nutrition and Dietetics ,Biochemistry ,Food Science and Nutrition ,Medicine (miscellaneous) ,food and beverages ,Identification (biology) ,Biology ,Branched chain fatty acids ,Phenotype ,Food Science - Abstract
OBJECTIVES: Branched chain fatty acids (BCFA) are rumen-derived fatty acids comprising about 2% of bovine milk fatty acids. BCFA possess anti-inflammatory properties and enriching the BCFA content of bovine milk may provide human health benefits of milk consumption. In this work, we determined whether high vs low forage diets impact the BCFA content of milk from Holstein cows and identified fatty acid phenotypes in high vs low BCFA-containing milks. METHODS: In this study, 62 Holstein cows were fed for 70 days, in a cross-over design fashion, either a high forage: concentrate (HF: C) diet or a low forage: concentrate (LF: C) diet. At the end of the 70-day feeding period, cows were switched to the alternate feeding arm. Milk samples were collected prior to the start of the first feeding period and at the end of each treatment period. Milk fatty acid content was determined by fatty acid methyl ester analysis. Paired t-tests, one-way ANOVA, and sparse partial least squares discriminant analysis (sPLSDA) were used to analyze the data. RESULTS: The total milk fatty acid concentration at the end of HF: C diet period was greater than that of the LF: C diet (4.2 ± 0.9 g/100 mL vs 3.95 ± 0.9 g/100 mL). sPLSDA demonstrated clear separation of the dietary treatments, with BCFA and odd-chain fatty acids as primary determinants. Total BCFA content was elevated by HF: C intake (1.86 ± 0.13%) vs LF: C intake (1.77 ± 0.14%). Quintile separation of high vs low BCFA milks resulted in 4 groups (n = 12) HF: C/low BCFA, HF: C/high BCFA; LF: C/low BCFA, and LF: C/high BCFA. The total BCFA contents of the low BCFA milks were not different regardless of forage content (1.70 ± 0.06% and 1.61 ± 0.04%) and were lower than the high BFCA milks (2.04 ± 0.11% and 1.98 ± 0.11%). Milks from the high BCFA quintiles had lower saturated fatty acid (SFA) content but higher oleic acid content than milks from the low BCFA quintiles. Of the 62 cows, 5 cows were identified as high BCFA producers and 6 cows as low BCFA producers regardless of the LF: C or HF: C diets. CONCLUSIONS: The data demonstrate that the BCFA content of milk is diet-sensitive but variation in cow responses suggest factors such as genotype or rumen microbiome composition may play significant roles. The potential to produce milk with high BCFA content and lower SFA content needs further study. FUNDING SOURCES: USDA-ARS Projects 3062–53000-001–00D, 5090–31000-025–00D, 80–8040-05–01-0000–0000.
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- 2021
12. Improving Natural Product Research Translation: from Source to Clinical Trial
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Jacqueline M. Stephens, Barbara C. Sorkin, Mahtab Jafari, Paula N. Brown, Naomi K. Fukagawa, D. Craig Hopp, Mario G. Ferruzzi, Kathleen R. Pritchett-Corning, Jeffrey Paul, Hervé Tiriac, Daniel Lakens, Bruce Barrett, Floyd H. Chilton, Sara K. Quinney, Dan Xi, Barbara Rehermann, John B. MacMillan, Freddie Ann Hoffman, Nisha S. Sipes, David O. Meltzer, Christopher S. Coffey, Adam J. Kuszak, Frederic D. Bushman, Kenneth D.R. Setchell, D. Lansing Taylor, Gregory Bloss, Giovanna Zappalà, Marco Pahor, Michael A. Walters, Mairead Kiely, Steven J. Casper, Guido F. Pauli, and Human Technology Interaction
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0301 basic medicine ,Prioritization ,Predictive validity ,medicine.medical_specialty ,Biochemistry & Molecular Biology ,Biomedical ,Computer science ,Physiology ,Medical Physiology ,Drug Evaluation, Preclinical ,Ethnobotany ,SDG 3 – Goede gezondheid en welzijn ,Biochemistry ,Article ,Value of information ,dietary supplements ,model systems ,Translational Research, Biomedical ,03 medical and health sciences ,0302 clinical medicine ,rigor and replicability ,SDG 3 - Good Health and Well-being ,Clinical Research ,Translational Research ,Complementary and Integrative Health ,Genetics ,medicine ,Animals ,Humans ,clinical predictive validity ,Translational Medical Research ,Molecular Biology ,Biological Products ,Public health ,Preclinical ,value of information ,Clinical trial ,030104 developmental biology ,Good Health and Well Being ,Risk analysis (engineering) ,Drug Evaluation ,Research questions ,Biochemistry and Cell Biology ,030217 neurology & neurosurgery ,Biotechnology - Abstract
While great interest in health effects of natural product (NP) including dietary supplements and foods persists, promising preclinical NP research is not consistently translating into actionable clinical trial (CT) outcomes. Generally considered the gold standard for assessing safety and efficacy, CTs, especially phase III CTs, are costly and require rigorous planning to optimize the value of the information obtained. More effective bridging from NP research to CT was the goal of a September,2018transdisciplinaryworkshop. Participants emphasized that replicability and likelihood of successful translation depend on rigor in experimental design, interpretation, and reporting across the continuum of NP research. Discussions spanned good practices for NP characterization and quality control; use and interpretation of models (computational through in vivo) with strong clinical predictive validity; controls for experimental artefacts, especially for in vitro interrogation of bioactivity and mechanisms of action; rigorous assessment and interpretation of prior research; transparency in all reporting; and prioritization of research questions. Natural product clinical trials prioritized based on rigorous, convergent supporting data and current public health needs are most likely to be informative and ultimately affect public health. Thoughtful, coordinated implementation of these practices should enhance the knowledge gained from future NP research.
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- 2019
13. Enhancing Natural Product Clinical Trials (P13-037-19)
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Jeffrey Paul, Gregory Bloss, Mario G. Ferruzzi, Guido F. Pauli, Mairead Kiely, Daniel Lakens, Adam J. Kuszak, Nisha S. Sipes, Naomi K. Fukagawa, David O. Meltzer, Bruce Barrett, and Barbara C. Sorkin
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medicine.medical_specialty ,Nutrition and Dietetics ,Natural product ,Methods and Protocols ,Medicine (miscellaneous) ,Tissue membrane ,Biology ,Health outcomes ,Clinical trial ,chemistry.chemical_compound ,chemistry ,Academia (organization) ,medicine ,Intensive care medicine ,Food Science ,Biological availability - Abstract
OBJECTIVES: To discuss good practices and criteria for optimal design and interpretation of pre-clinical and clinical natural product (NP) research in order to increase benefit from our investment in NP clinical trials (CT). Background: Large, randomized, controlled CT often fail to reject the null hypothesis or show rigorous evidence of benefit. This includes recent large, NIH-supported CT of nutrients such as vitamin D and selenium, and of botanical dietary supplements. Negative and positive outcomes may be equally important for public health, but because large CT cost at least $20 M each, plus opportunity costs, it is important that CT designs maximize the yield of actionable information regardless of outcome. METHODS: Experts and stakeholders from academia, government and the private sector collaboratively developed a broadly attended workshop in which good practices to enhance rigor, reproducibility and translational relevance were discussed. RESULTS: N/A. CONCLUSIONS: Critical issues in CT design include product identity, reproducibility and pharmacology (where feasible), power to test a primary outcome significant to consumers, and placebo controls. When basing a CT on traditional use or prior in vitro or in vivo studies, similarity of product (e.g., source identity, methods of preparation, form and intake), health outcome and population (e.g., age, sex, genetics, diet and environment), require careful consideration. Appropriate controls for known types of in vitro assay interference (e.g., aggregation, membrane disruption, protein denaturation) are imperative. Compounds with limited bioavailability, or activity only at concentrations above those achievable by ingestion, are likely poor candidates for dietary CT. Translational validity of model systems should be carefully assessed. Appropriate analyses (e.g., p-curve and meta-regression methods) should be used to obtain bias-corrected effect size estimates, and to identify research areas where the evidence base may be weaker than published findings suggest. Finally, CT prioritization should consider expected impact on public health, and whether known NP causal mechanisms of action are such that useful information, e.g., on product bioavailability or biological activity, are generated even if the completed CT fails to reject the null hypothesis. FUNDING SOURCES: NIH, FDA, USDA.
- Published
- 2019
14. Carbon dioxide (CO2) levels this century will alter the protein, micronutrients, and vitamin content of rice grains with potential health consequences for the poorest rice-dependent countries
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Chunwu Zhu, Gang Liu, Xi Xu, Naomi K. Fukagawa, Lewis H. Ziska, Jianguo Zhu, Kristie L. Ebi, Kazuhiko Kobayashi, Qian Jiang, Irakli Loladze, Saman Seneweera, and Adam Drewnowski
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0106 biological sciences ,0301 basic medicine ,Vitamin ,Asia ,Nitrogen ,medicine.medical_treatment ,Iron ,Biology ,ECOLOGY ,01 natural sciences ,Toxicology ,03 medical and health sciences ,chemistry.chemical_compound ,Nutrient ,Per capita ,medicine ,ENVIRONMENTAL STUDIEs ,Humans ,Biomass ,Micronutrients ,Research Articles ,Plant Proteins ,Biomass (ecology) ,Carbon dioxide in Earth's atmosphere ,Multidisciplinary ,Vitamin E ,food and beverages ,SciAdv r-articles ,Oryza ,Vitamins ,Carbon Dioxide ,Micronutrient ,Molecular Weight ,Zinc ,030104 developmental biology ,chemistry ,Carbon dioxide ,010606 plant biology & botany ,Research Article - Abstract
Rising CO2 levels may induce nutritional deficits (protein, minerals, and vitamins) in the highest rice-consuming countries., Declines of protein and minerals essential for humans, including iron and zinc, have been reported for crops in response to rising atmospheric carbon dioxide concentration, [CO2]. For the current century, estimates of the potential human health impact of these declines range from 138 million to 1.4 billion, depending on the nutrient. However, changes in plant-based vitamin content in response to [CO2] have not been elucidated. Inclusion of vitamin information would substantially improve estimates of health risks. Among crop species, rice is the primary food source for more than 2 billion people. We used multiyear, multilocation in situ FACE (free-air CO2 enrichment) experiments for 18 genetically diverse rice lines, including Japonica, Indica, and hybrids currently grown throughout Asia. We report for the first time the integrated nutritional impact of those changes (protein, micronutrients, and vitamins) for the 10 countries that consume the most rice as part of their daily caloric supply. Whereas our results confirm the declines in protein, iron, and zinc, we also find consistent declines in vitamins B1, B2, B5, and B9 and, conversely, an increase in vitamin E. A strong correlation between the impacts of elevated [CO2] on vitamin content based on the molecular fraction of nitrogen within the vitamin was observed. Finally, potential health risks associated with anticipated CO2-induced deficits of protein, minerals, and vitamins in rice were correlated to the lowest overall gross domestic product per capita for the highest rice-consuming countries, suggesting potential consequences for a global population of approximately 600 million.
- Published
- 2018
15. Inhaled Asbestos Exacerbates Atherosclerosis in Apolipoprotein E–Deficient Mice via CD4+ T Cells
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Jessica Gagne, Sally A. Huber, Naomi K. Fukagawa, Tara Sabo-Attwood, Douglas J. Taatjes, Muyao Li, Cynthia R. Timblin, Chad Steele, Brooke T. Mossman, and Kelly J. Butnor
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Apolipoprotein E ,CD4-Positive T-Lymphocytes ,Male ,Health, Toxicology and Mutagenesis ,Blotting, Western ,Inflammation ,Electrophoretic Mobility Shift Assay ,medicine.disease_cause ,Asbestos ,CD4+ T-cells ,NF-κB ,lung ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Apolipoproteins E ,Fibrosis ,Chrysotile ,medicine ,Animals ,030304 developmental biology ,Inhalation exposure ,Mice, Knockout ,0303 health sciences ,Inhalation Exposure ,Lung ,business.industry ,Research ,fibrosis ,Public Health, Environmental and Occupational Health ,030224 pathology ,medicine.disease ,AP-1 ,Atherosclerosis ,chrysotile asbestos ,3. Good health ,medicine.anatomical_structure ,13. Climate action ,inflammation ,Knockout mouse ,Immunology ,Female ,medicine.symptom ,business ,knockout mice ,MCP-1 - Abstract
Background Associations between air pollution and morbidity/mortality from cardiovascular disease are recognized in epidemiologic and clinical studies, but the mechanisms by which inhaled fibers or particles mediate the exacerbation of atherosclerosis are unclear. Objective and methods To determine whether lung inflammation after inhalation of a well-characterized pathogenic particulate, chrysotile asbestos, is directly linked to exacerbation of atherosclerosis and the mechanisms involved, we exposed apolipoprotein E–deficient (ApoE−/−) mice and ApoE−/− mice crossed with CD4−/− mice to ambient air, NIEHS (National Institute of Environmental Health Sciences) reference sample of chrysotile asbestos, or fine titanium dioxide (TiO2), a nonpathogenic control particle, for 3, 9, or 30 days. Results ApoE−/− mice exposed to inhaled asbestos fibers had approximately 3-fold larger atherosclerotic lesions than did TiO2-exposed ApoE−/− mice or asbestos-exposed ApoE−/−/CD4−/− double-knockout (DKO) mice. Lung inflammation and the magnitude of lung fibrosis assessed histologically were similar in asbestos-exposed ApoE−/− and DKO mice. Monocyte chemoattractant protein-1 (MCP-1) levels were increased in bronchoalveolar lavage fluid and plasma, and plasma concentrations correlated with lesion size (p < 0.04) in asbestos-exposed ApoE−/− mice. At 9 days, activator protein-1 (AP-1) and nuclear factor-κB (NF-κB), transcription factors linked to inflammation and found in the promoter region of the MCP-1 gene, were increased in aortas of asbestos-exposed ApoE−/− but not DKO mice. Conclusion Our findings show that the degree of lung inflammation and fibrosis does not correlate directly with cardiovascular effects of inhaled asbestos fibers and support a critical role of CD4+ T cells in linking fiber-induced pulmonary signaling to consequent activation of AP-1– and NF-κB–regulated genes in atherogenesis.
- Published
- 2008
16. An Extracellular Signal–Regulated Kinase 2 Survival Pathway Mediates Resistance of Human Mesothelioma Cells to Asbestos-Induced Injury
- Author
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William A. Swain, Kenneth J. O'Byrne, Stephen P. Faux, Naomi K. Fukagawa, Brooke T. Mossman, Jedd M. Hillegass, Maximilian B. MacPherson, Harvey I. Pass, Arti Shukla, Trisha F. Barrett, and Joseph R. Testa
- Subjects
Pulmonary and Respiratory Medicine ,MAPK/ERK pathway ,Mesothelioma ,Cell Survival ,Pleural Neoplasms ,Clinical Biochemistry ,MAP Kinase Kinase 2 ,MAP Kinase Kinase 1 ,Gene Expression ,Biology ,Cell Line ,Epidermal growth factor ,Humans ,Enzyme Inhibitors ,RNA, Small Interfering ,Protein kinase A ,Molecular Biology ,Protein kinase B ,Mitogen-Activated Protein Kinase 1 ,Kinase ,Asbestos, Crocidolite ,Mitogen-Activated Protein Kinase Inhibitor ,Cell Biology ,Articles ,ErbB Receptors ,Cell culture ,Cancer research ,Signal transduction ,Signal Transduction - Abstract
We hypothesized that normal human mesothelial cells acquire resistance to asbestos-induced toxicity via induction of one or more epidermal growth factor receptor (EGFR)–linked survival pathways (phosphoinositol-3-kinase/AKT/mammalian target of rapamycin and extracellular signal–regulated kinase [ERK] 1/2) during simian virus 40 (SV40) transformation and carcinogenesis. Both isolated HKNM-2 mesothelial cells and a telomerase-immortalized mesothelial line (LP9/TERT-1) were more sensitive to crocidolite asbestos toxicity than an SV40 Tag-immortalized mesothelial line (MET5A) and malignant mesothelioma cell lines (HMESO and PPM Mill). Whereas increases in phosphorylation of AKT (pAKT) were observed in MET5A cells in response to asbestos, LP9/TERT-1 cells exhibited dose-related decreases in pAKT levels. Pretreatment with an EGFR phosphorylation or mitogen-activated protein kinase kinase 1/2 inhibitor abrogated asbestos-induced phosphorylated ERK (pERK) 1/2 levels in both LP9/TERT-1 and MET5A cells as well as increases in pAKT levels in MET5A cells. Transient transfection of small interfering RNAs targeting ERK1, ERK2, or AKT revealed that ERK1/2 pathways were involved in cell death by asbestos in both cell lines. Asbestos-resistant HMESO or PPM Mill cells with high endogenous levels of ERKs or AKT did not show dose-responsive increases in pERK1/ERK1, pERK2/ERK2, or pAKT/AKT levels by asbestos. However, small hairpin ERK2 stable cell lines created from both malignant mesothelioma lines were more sensitive to asbestos toxicity than shERK1 and shControl lines, and exhibited unique, tumor-specific changes in endogenous cell death–related gene expression. Our results suggest that EGFR phosphorylation is causally linked to pERK and pAKT activation by asbestos in normal and SV40 Tag–immortalized human mesothelial cells. They also indicate that ERK2 plays a role in modulating asbestos toxicity by regulating genes critical to cell injury and survival that are differentially expressed in human mesotheliomas.
- Published
- 2011
17. Short-Term Effects of Dietary Fatty Acids on Muscle Lipid Composition and Serum Acylcarnitine Profile in Human Subjects
- Author
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Naomi K. Fukagawa, Deborah M. Muoio, C. Lawrence Kien, Robert Stevens, and Karen Everingham
- Subjects
Male ,medicine.medical_specialty ,Endocrinology, Diabetes and Metabolism ,Palmitic Acid ,Medicine (miscellaneous) ,Adipose tissue ,Article ,Palmitic acid ,chemistry.chemical_compound ,Endocrinology ,Internal medicine ,Carnitine ,medicine ,Humans ,Muscle, Skeletal ,Palmitoylcarnitine ,Triglycerides ,Diacylglycerol kinase ,chemistry.chemical_classification ,Nutrition and Dietetics ,Dose-Response Relationship, Drug ,Fatty acid ,Skeletal muscle ,Dietary Fats ,Oleic acid ,medicine.anatomical_structure ,chemistry ,Adipose Tissue ,Female ,Oxidation-Reduction ,medicine.drug ,Oleic Acid - Abstract
In cultured cells, palmitic acid (PA) and oleic acid (OA) confer distinct metabolic effects, yet, unclear, is whether changes in dietary fat intake impact cellular fatty acid (FA) composition. We hypothesized that short-term increases in dietary PA or OA would result in corresponding changes in the FA composition of skeletal muscle diacylglycerol (DAG) and triacylglycerol (TAG) and/or the specific FA selected for β-oxidation. Healthy males (N = 12) and females (N = 12) ingested a low-PA diet for 7 days. After fasting measurements of the serum acylcarnitine (AC) profile, subjects were randomized to either high-PA (HI PA) or low-PA/high-OA (HI OA) diets. After 7 days, the fasting AC measurement was repeated and a muscle/fat biopsy obtained. FA composition of intramyocellular DAG and TAG and serum AC was measured. HI PA increased, whereas HI OA decreased, serum concentration of 16:0 AC (P < 0.001). HI OA increased 18:1 AC (P = 0.005). HI PA was associated with a higher PA/OA ratio in muscle DAG and TAG (DAG: 1.03 ± 0.24 vs. 0.46 ± 0.08, P = 0.04; TAG: 0.63 ± 0.07 vs. 0.41 ± 0.03, P = 0.01). The PA concentration in the adipose tissue DAG (µg/mg adipose tissue) was 0.17 ± 0.02 in those receiving the HI PA diet (n = 6), compared to 0.11 ± 0.02 in the HI OA group (n = 4) (P = 0.067). The relative PA concentration in muscle DAG and TAG and the serum palmitoylcarnitine concentration was higher in those fed the high-PA diet.
- Published
- 2010
18. AGE-RELATED DIFFERENCES IN INSULIN-LIKE GROWTH FACTOR-1 RECEPTOR SIGNALING REGULATES AKT/FOXO3A AND ERK/FOS PATHWAYS IN VASCULAR SMOOTH MUSCLE CELLS
- Author
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Naomi K. Fukagawa, Muyao Li, Jen-Fu Chiu, and Jessica Gagne
- Subjects
MAPK/ERK pathway ,Aging ,Vascular smooth muscle ,Physiology ,medicine.medical_treatment ,Morpholines ,Clinical Biochemistry ,Myocytes, Smooth Muscle ,Biology ,Transfection ,Article ,Muscle, Smooth, Vascular ,Receptor, IGF Type 1 ,Insulin-like growth factor ,Proliferating Cell Nuclear Antigen ,Rats, Inbred BN ,medicine ,Animals ,Insulin-Like Growth Factor I ,Phosphorylation ,RNA, Small Interfering ,Extracellular Signal-Regulated MAP Kinases ,Protein kinase B ,Protein Kinase Inhibitors ,Cells, Cultured ,Crosses, Genetic ,Mitogen-Activated Protein Kinase 1 ,Mitogen-Activated Protein Kinase 3 ,Kinase ,Superoxide Dismutase ,Forkhead Box Protein O3 ,Age Factors ,Forkhead Transcription Factors ,Cell Biology ,Tyrphostins ,Catalase ,Rats, Inbred F344 ,Rats ,Chromones ,Cancer research ,RNA Interference ,Ribonucleosides ,Signal transduction ,Tyrosine kinase ,Proto-Oncogene Proteins c-akt ,Proto-Oncogene Proteins c-fos ,Cyclin-Dependent Kinase Inhibitor p27 ,Signal Transduction - Abstract
Advanced age is a major risk factor for atherosclerosis, but how aging per se influences pathogenesis is not clear. Insulin-like growth factor-1 receptor (IGF-1R) promotes aortic vascular smooth muscle cell (VSMC) growth, migration, and extracellular matrix formation, but how IGF-1R signaling changes with age in VSMC is not known. We previously found age-related differences in the activation of Akt/FOXO3a and ERK1/2 pathways in VSMC, but the up-stream signaling remains unclear. Using explanted VSMC from Fischer 344/Brown Norway F1 hybrid rats shown to display age-related vascular pathology similar to humans, we compared IGF-1R expression in early passages of VSMC and found a constitutive activation of IGF-1R in VSMC from old compared to young rats, including IGF-1R expression and its tyrosine kinase activity. The link between IGF-1R activation and the Akt/FOXO3a and ERK pathways was confirmed through the induction of IGF-1R with IGF-1 in young cells and attenuation of IGF-1R with an inhibitor in old cells. The effects of three kinase inhibitors: AG1024, LY294002, and TCN, were compared in VSMC from old rats to differentiate IGF-1R from other upstream signaling that could also regulate the Akt/FOXO and ERK pathways. Genes for p27kip-1, catalase and MnSOD, which play important roles in the control of cell cycle arrest and stress resistance, were found to be FOXO3a-targets based on FOXO3a-siRNA treatment. Furthermore, IGF-1R signaling modulated these genes through activation of the Akt/FOXO3a pathway. Therefore, activation of IGF-1R signaling influences VSMC function in old rats and may contribute to the increased risk for atherosclerosis.
- Published
- 2008
19. Age-Related Changes in Redox Signaling and VSMC Function.
- Author
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Muyao Li and Naomi K. Fukagawa
- Subjects
- *
VASCULAR smooth muscle , *MUSCLE cells , *CELLULAR signal transduction , *AGE factors in disease , *EPIDEMIOLOGY , *CARDIOVASCULAR diseases , *TRANSCRIPTION factors , *PATHOLOGICAL physiology - Abstract
AbstractEpidemiological studies have shown that advancing age is associated with an increased prevalence of cardiovascular disease (CVD). Vascular smooth muscle cells (VSMC) comprise the major arterial cell population, and changes in VSMC behavior, function, and redox status with age contribute to alterations in vascular remodeling and cell signaling. Over two decades of work on aged animal models provide support for age-related changes in VSMC and/or arterial tissues. Enhanced production of reactive oxygen species (ROS) and insufficient removal by scavenging systems are hallmarks of vascular aging. VSMC proliferation and migration are core processes in vascular remodeling and influenced by growth factors and signaling networks. The intrinsic link between gene regulation and aging often relates directly to transcription factors and their regulatory actions. Modulation of growth factor signaling leads to up- or downregulation of transcription factors that control expression of genes associated with VSMC proliferation, inflammation, and ROS production. Four major signaling pathways related to the transcription factors, AP-1, NF-κB, FoxO, and Nrf2, will be reviewed. Knowledge of age-related changes in signaling pathways in VSMC that lead to alterations in cell behavior and function consistent with disease progression may help in efforts to attenuate age-related CVD, such as atherosclerosis. Antioxid. Redox Signal.12, 641–655. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
20. Vernon R Young: the man, the scientist, the visionary.
- Author
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Scrimshaw, Nevin S., Takuzo Kitamura, Ajami, Alfred M., and Naomi K. Fukagawa
- Published
- 2006
21. Age-related differences in MAP kinase activity in VSMC in response to glucose or TNF-α.
- Author
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Muyao Li, Brooke T. Mossman, Emily Kolpa, Cynthia R. Timblin, Arti Shukla, Douglas J. Taatjes, and Naomi K. Fukagawa
- Subjects
SMOOTH muscle ,MUSCLE cells ,TUMOR necrosis factors ,PROTEIN binding - Abstract
Aortic vascular smooth muscle cells (VSMC) were used to study the effect of age on responses to high glucose concentrations or the cytokine, tumor necrosis factor-alpha (TNF-α). Activator protein-1 (AP-1) binding to DNA increased more in VSMC from old versus young rats (P < 0.02) and was related to increased expression of its components, c-Fos, Fra-1, and JunD. The relationship to upstream signals, i.e., activities of mitogen-activated protein kinases (MAPK), was studied using antibodies to total and phosphorylated forms of extracellular signal-regulated kinases (ERK), c-Jun N-terminal kinases (JNK) and p38. High glucose and TNF-α increased ERK phosphorylation more in old (P < 0.05); whereas only TNF-α induced JNK activation in young (P < 0.04). PD98059, a MEK inhibitor, attenuated AP-1 activation, lowered c-Fos and Fra-1 protein levels and reduced cell number and cells positive for proliferating cell nuclear antigen in old. We concluded that age differentially influenced activation of signaling pathways in VSMC exposed to high glucose or TNF-α. This may contribute to the increased risk for vascular disease associated with aging and diabetes mellitus (DM). J. Cell. Physiol. 197: 418425, 2003© 2003 Wiley-Liss, Inc. [ABSTRACT FROM AUTHOR]
- Published
- 2003
- Full Text
- View/download PDF
22. Dietary fiber, starch, and sugars in bananas at different stages of ripeness in the retail market.
- Author
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Katherine M Phillips, Ryan C McGinty, Garret Couture, Pamela R Pehrsson, Kyle McKillop, and Naomi K Fukagawa
- Subjects
Medicine ,Science - Abstract
The goal of this work was to evaluate changes in dietary fiber measured by the traditional enzymatic-gravimetric method (AOAC 991.43) and the more recently accepted modified enzymatic-gravimetric method (AOAC 2011.25), mono- and disaccharides, and starch as a function of assessed ripeness in a controlled study of a single lot of bananas and in bananas at the same assessed stages of ripeness from bananas purchased in retail stores, from different suppliers. Sugars, starch, and dietary fiber were analyzed in bananas from a single lot, at different stages of ripeness, and in retail samples at the same assessed stages of ripeness. Mean fiber measured by the traditional enzymatic-gravimetric method (EG) was ~2 g/100g and not affected by ripeness. Mean fiber assessed with the recently modified method (mEG) was ~18 g/100g in unripe fruit and decreased to 4-5 g/100g in ripe and ~2 g/100g in overripe bananas. Slightly ripe and ripe bananas differed by ~1.1 g/100g in the controlled single-lot study but not among retail samples. There was a large increase in fructose, glucose and total sugar going from unripe to ripe with no differences between ripe and overripe. Aside from stage of ripeness, the carbohydrate composition in retail bananas is likely affected by differences in cultivar and post-harvest handling. Results from this study demonstrate the importance of measuring dietary fiber using the mEG approach, developing more comprehensive and sensitive carbohydrate analytical protocols and food composition data, and recognizing the impact of different stages of maturity and ripeness on carbohydrate intake estimated from food composition data.
- Published
- 2021
- Full Text
- View/download PDF
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