115 results on '"Miyamura N"'
Search Results
2. Molecular scanning of the insulin receptor substrate-1 (IRS-1) gene in Japanese patients with NIDDM: identification of five novel polymorphisms
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Ura, S., Araki, E., Kishikawa, H., Shirotani, T., Todaka, M., Isami, S., Shimoda, S., Yoshimura, R., Matsuda, K., Motoyoshi, S., Miyamura, N., Kahn, C. R., and Shichiri, M.
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- 1996
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3. Bradykinin enhances GLUT4 translocation through the increase of insulin receptor tyrosine kinase in primary adipocytes: evidence that bradykinin stimulates the insulin signalling pathway
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Isami, S., Kishikawa, H., Araki, E., Uehara, M., Kaneko, K., Shirotani, T., Todaka, M., Ura, S., Motoyoshi, S., Matsumoto, K., Miyamura, N., and Shichiri, M.
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- 1996
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4. Expression of insulin receptor on clonal pancreatic alpha cells and its possible role for insulin-stimulated negative regulation of glucagon secretion
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Kisanuki, K., Kishikawa, H., Araki, E., Shirotani, T., Uehara, M., Isami, S., Ura, S., Jinnouchi, H., Miyamura, N., and Shichiri, M.
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- 1995
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5. A case of insulin autoimmune syndrome with HLA DRB1*0404: impact on the hypothesis for the molecular pathogenesis involving DRB1 molecules
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Miyamura, N., Murata, Y., Taketa, K., Ichihara, Y., Matsumura, T., Tokunaga, H., Matsumoto, K., Sakakida, M., and Araki, E.
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- 2006
6. Effect on insulin sensitivity of angiotensin converting enzyme inhibitors with or without a sulphydryl group: Bradykinin may improve insulin resistance in dogs and humans
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Uehara, M., Kishikawa, H., Isami, S., Kisanuki, K., Ohkubo, Y., Miyamura, N., Miyata, T., Yano, T., and Shichiri, M.
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- 1994
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7. Scene-based wavefront correction using SPGD algorithm for high-resolution earth observation.
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Hirose, M., Miyamura, N., Sato, S., Mizutani, T., and Kimura, T.
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- 2024
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8. Laboratory test results for adaptive optics using image-based wavefront sensing for remote sensing.
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Miyamura, N.
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- 2011
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9. Detection and correction of spectral and spatial misregistrations for hyperspectral data.
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Yokoya, N., Miyamura, N., and Iwasaki, A.
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- 2010
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10. Onboard wavefront estimation using spatial light modulator as a phase diversity generator.
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Miyamura, N.
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- 2009
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11. Identification of Fabry's disease by the screening of α-galactosidase A activity in male and female hemodialysis patients.
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Tanaka, M., Ohashi, T., Kobayashi, M., Eto, V., Miyamura, N., Nishida, K., Araki, E., Itoh, K., Matsushita, K., Hara, M., Kuwahara, K., Nakano, T., Yasumoto, N., Nonoguchi, H., and Tomita, K.
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HEMODIALYSIS patients ,THERAPEUTICS ,PATIENTS ,DISEASES ,GENETIC mutation ,GENETICS - Abstract
Background: Although previous studies reported that the prevalence of Fabry's disease was 0.16 - 1.2% in hemodialysis (HD) patients based on measurement of α-galactosidase A (α-Gal A) activity, few reports detected female patients by the screening for α-Gal A. Here we determined the prevalence of Fabry's disease not only in male but also in female HD patients by measuring α-Gal A. Methods: Plasma α-Gal A was measured in 696 consecutive males (n = 401) and females (n = 295) on HD. Patients with low plasma α-Gal A were examined for leukocyte α-Gal A, and patients with low leukocyte α-Gal A underwent α-Gal A gene sequence analysis for possible mutations, and family survey. Results: Among 15 patients with low plasma α-Gal A activity, 4 male patients with low leukocyte α-Gal A and 1 female patient revealing low plasma α-Gal A were detected in 696 HD patients (0.7% of total patients). 3 of these 5 patients were already diagnosed to have the classical type of Fabry's disease. The other 2 patients were newly diagnosed as Fabry's disease, and did not have typical manifestations of Fabry's disease other than renal failure and left ventricular hypertrophy. DNA analysis of these 2 newly diagnosed patients revealed that each had an α-Gal missense mutation, previously identified (E66Q, M2961). Conclusion: Fabry's disease should be considered in the etiology of unexplained end-stage renal disease. Not only affected males but also affected females undergoing HD patients can be readily diagnosed by α-Gal A activities and gene analysis. These patients and their family members may benefit from enzyme replacement therapy for Fabry's disease. [ABSTRACT FROM AUTHOR]
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- 2005
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12. Heterozygous knockout of the IRS-1 gene in mice enhances obesity-linked insulin resistance: a possible model for the development of type 2 diabetes.
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Shirakami, A., Toyonaga, T., Tsuruzoe, K., Shirotani, T., Matsumoto, K., Yoshizato, K., Kawashima, J., Hirashima, Y., Miyamura, N., Kahn, C. R., and Araki, E.
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- 2002
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13. Wavefront compensation based on stochastic parallel gradient descent algorithm for Earth observation telescope.
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Hirose, M., Miyamura, N., Sato, S., Mizutani, T., and Kimura, T.
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- 2021
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14. A case of insulin autoimmune syndrome with HLA DRB1 0404: impact on the hypothesis for the molecular pathogenesis involving DRB1 molecules.
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Miyamura N, Murata Y, Taketa K, Ichihara Y, Matsumura T, Tokunaga H, Matsumoto K, Sakakida M, and Araki E
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- 2006
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15. Experimental demonstration of scene-based cophasing in optical synthetic aperture imaging using the SPGD algorithm.
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Hirose M and Miyamura N
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Large-aperture telescopes based on optical synthetic aperture imaging are investigated for recent high-resolution spaceborne observations. An enabling technique of aperture synthesis is a cophasing method to suppress a piston-tip-tilt error between sub-apertures. This paper proposes a scene-based cophasing technique using the stochastic parallel gradient descent (SPGD) algorithm, assuming application to high-resolution Earth observation. A significant advantage of the SPGD algorithm is a model-less cophasing capability based on extended scenes, but the simultaneous scene-based piston-tip-tilt correction between multiple apertures has not been demonstrated. In this paper, we developed a tabletop synthetic aperture imaging system with 37 sub-apertures and demonstrated extended-scene-based piston-tip-tilt control by optimizing applied voltages to 111 actuators simultaneously. The demonstration experiments used not only static scenes but also a time-varying dynamic scene for observation targets. In every measurement, the proposed scene-based approach reduced the initially defined piston-tip-tilt errors, and the image sharpness significantly improved, although the correction rate in the dynamic scene observation was slower. Finally, this paper discusses the influence of scene dynamics on image-based cophasing.
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- 2024
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16. Sequential phase diversity for wavefront correction using a deformable mirror with modeling errors: publisher's note.
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Miyamura N, Hirose M, and Sato S
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This publisher's note corrects an error in Appl. Opt.62, 7931 (2023)APOPAI0003-693510.1364/AO.497155.
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- 2023
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17. Classification of the HCN isomerization reaction dynamics in Ar buffer gas via machine learning.
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Yamashita T, Miyamura N, and Kawai S
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The effect of the presence of Ar on the isomerization reaction HCN ⇄ CNH is investigated via machine learning. After the potential energy surface function is developed based on the CCSD(T)/aug-cc-pVQZ level ab initio calculations, classical trajectory simulations are performed. Subsequently, with the aim of extracting insights into the reaction dynamics, the obtained reactivity, that is, whether the reaction occurs or not under a given initial condition, is learned as a function of the initial positions and momenta of all the atoms in the system. The prediction accuracy of the trained model is greater than 95%, indicating that machine learning captures the features of the phase space that affect reactivity. Machine learning models are shown to successfully reproduce reactivity boundaries without any prior knowledge of classical reaction dynamics theory. Subsequent analyses reveal that the Ar atom affects the reaction by displacing the effective saddle point. When the Ar atom is positioned close to the N atom (resp. the C atom), the saddle point shifts to the CNH (HCN) region, which disfavors the forward (backward) reaction. The results imply that analyses aided by machine learning are promising tools for enhancing the understanding of reaction dynamics., (© 2023 Author(s). All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).)
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- 2023
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18. Real-Time Search-Assisted Multiplexed Quantitative Proteomics Reveals System-Wide Translational Regulation of Non-Canonical Short Open Reading Frames.
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Kozuka-Hata H, Hiroki T, Miyamura N, Kitamura A, Tsumoto K, Inoue JI, and Oyama M
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- Humans, Vorinostat pharmacology, Open Reading Frames, HeLa Cells, Histone Deacetylases genetics, Hydroxamic Acids pharmacology, Histone Deacetylase Inhibitors pharmacology, Proteomics methods, Proteome metabolism
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Abnormal expression of histone deacetylases (HDACs) is reported to be associated with angiogenesis, metastasis and chemotherapy resistance regarding cancer in a wide range of previous studies. Suberoylanilide hydroxamic acid (SAHA) is well known to function as a pan-inhibitor for HDACs and recognized as one of the therapeutic drug candidates to epigenetically coordinate cancer cell fate regulation on a genomic scale. Here, we established a Real-Time Search (RTS)-assisted mass spectrometric platform for system-wide quantification of translated products encoded by non-canonical short open reading frames (ORFs) as well as already annotated protein coding sequences (CDSs) on the human transciptome and applied this methodology to quantitative proteomic analyses of suberoylanilide hydroxamic acid (SAHA)-treated human HeLa cells to evaluate proteome-wide regulation in response to drug perturbation. Very intriguingly, our RTS-based in-depth proteomic analysis enabled us to identify approximately 5000 novel peptides from the ribosome profiling-based short ORFs encoded in the diversified regions on presumed 'non-coding' nucleotide sequences of mRNAs as well as lncRNAs and nonsense mediated decay (NMD) transcripts. Furthermore, TMT-based multiplex large-scale quantification of the whole proteome changes upon differential SAHA treatment unveiled dose-dependent selective translational regulation of a limited fraction of the non-canonical short ORFs in addition to key cell cycle/proliferation-related molecules such as UBE2C, CENPF and PRC1. Our study provided the first system-wide landscape of drug-perturbed translational modulation on both canonical and non-canonical proteome dynamics in human cancer cells.
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- 2023
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19. Tumor-resident regulatory T cells in pancreatic cancer express the αvβ5 integrin as a targetable activation marker.
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Suzuki K, Kunisada Y, Miyamura N, Eikawa S, Hurtado de Mendoza T, Mose ES, Lu C, Kuroda Y, Ruoslahti E, Lowy AM, and Sugahara KN
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Pancreatic ductal adenocarcinoma (PDAC) has abundant immunosuppressive regulatory T cells (Tregs), which contribute to a microenvironment resistant to immunotherapy. Here, we report that Tregs in the PDAC tissue, but not those in the spleen, express the αvβ5 integrin in addition to neuropilin-1 (NRP-1), which makes them susceptible to the iRGD tumor-penetrating peptide, which targets cells positive for αv integrin- and NRP-1. As a result, long-term treatment of PDAC mice with iRGD leads to tumor-specific depletion of Tregs and improved efficacy of immune checkpoint blockade. αvβ5 integrin
+ Tregs are induced from both naïve CD4+ T cells and natural Tregs upon T cell receptor stimulation, and represent a highly immunosuppressive subpopulation of CCR8+ Tregs. This study identifies the αvβ5 integrin as a marker for activated tumor-resident Tregs, which can be targeted to achieve tumor-specific Treg depletion and thereby augment anti-tumor immunity for PDAC therapy.- Published
- 2023
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20. A pancreatic cancer mouse model with human immunity.
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Miyamura N, Suzuki K, Friedman RA, Floratos A, Kunisada Y, Masuda K, Lowy AM, Tsuji M, and Sugahara KN
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Pancreatic ductal adenocarcinoma (PDAC) is characterized by a tumor immune microenvironment (TIME) that promotes resistance to immunotherapy. A preclinical model system that facilitates studies of the TIME and its impact on the responsiveness of human PDAC to immunotherapies remains an unmet need. We report a novel mouse model, which develops metastatic human PDAC that becomes infiltrated by human immune cells recapitulating the TIME of human PDAC. The model may serve as a versatile platform to study the nature of human PDAC TIME and its response to various treatments.
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- 2023
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21. Deviation-based wavefront correction using the SPGD algorithm for high-resolution optical remote sensing.
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Hirose M, Miyamura N, and Sato S
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Model-free image-based wavefront correction techniques, such as the stochastic parallel gradient descent (SPGD) algorithm, will be useful in achieving diffraction-limited optical performance in near-future optical remote sensing systems. One difficulty facing the image-based method is that the correction performance depends on the evaluation metric and the evaluated scene. We propose several evaluation functions and investigate the relationship between the optimization speed and the scene textures for each metric in the SPGD algorithm. Based on the simulation results, the study experimentally compared wavefront correction performance using four cost functions and two extended aerial images. Consequently, we found that the deviation-based cost function allowed efficient wavefront correction for versatile extended scenes. In addition, observing extended scenes with distinct structures can facilitate correction speed. Furthermore, we numerically validated this approach in a segmented-aperture imaging system for large telescopes. We believe that the presented approach allows us to realize spaceborne remote sensing with unprecedented high angular resolution.
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- 2022
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22. Characterization of mouse embryonic fibroblasts derived from Rassf6 knockout mice shows the implication of Rassf6 in the regulation of NF-κB signaling.
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Morishita M, Arimoto-Matsuzaki K, Kitamura M, Niimura K, Iwasa H, Maruyama J, Hiraoka Y, Yamamoto K, Kitagawa M, Miyamura N, Nishina H, and Hata Y
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- Animals, Apoptosis, Apoptosis Regulatory Proteins, Fibroblasts metabolism, Mice, Mice, Knockout, Tumor Suppressor Protein p53 genetics, Monomeric GTP-Binding Proteins metabolism, NF-kappa B genetics, NF-kappa B metabolism
- Abstract
RASSF6 is a member of the tumor suppressor Ras association domain family (RASSF) proteins. We have reported using human cancer cell lines that RASSF6 induces apoptosis and cell cycle arrest via p53 and plays tumor suppressive roles. In this study, we generated Rassf6 knockout mice by CRISPR/Cas technology. Contrary to our expectation, Rassf6 knockout mice were apparently healthy. However, Rassf6-null mouse embryonic fibroblasts (MEF) were resistant against ultraviolet (UV)-induced apoptosis/cell cycle arrest and senescence. UV-induced p53-target gene expression was compromised, and DNA repair was delayed in Rassf6-null MEF. More importantly, KRAS active mutant promoted the colony formation of Rassf6-null MEF but not the wild-type MEF. RNA sequencing analysis showed that NF-κB signaling was enhanced in Rassf6-null MEF. Consistently, 7,12-dimethylbenz(a)anthracene (DMBA) induced skin inflammation in Rassf6 knockout mice more remarkably than in the wild-type mice. Hence, Rassf6 deficiency not only compromises p53 function but also enhances NF-κB signaling to lead to oncogenesis., (© 2021 Molecular Biology Society of Japan and John Wiley & Sons Australia, Ltd.)
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- 2021
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23. Tumor-penetrating therapy for β5 integrin-rich pancreas cancer.
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Hurtado de Mendoza T, Mose ES, Botta GP, Braun GB, Kotamraju VR, French RP, Suzuki K, Miyamura N, Teesalu T, Ruoslahti E, Lowy AM, and Sugahara KN
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- Animals, Cancer-Associated Fibroblasts, Carcinoma, Pancreatic Ductal drug therapy, Carcinoma, Pancreatic Ductal genetics, Carcinoma, Pancreatic Ductal metabolism, Carcinoma, Pancreatic Ductal pathology, Cell Line, Tumor, Disease Progression, Drug Delivery Systems, Drug Therapy, Gene Expression Regulation, Neoplastic, Humans, Mice, Mice, Inbred C57BL, Oligopeptides, Pancreatic Neoplasms drug therapy, Pancreatic Neoplasms genetics, Pancreatic Neoplasms pathology, Tumor Microenvironment, Xenograft Model Antitumor Assays, Pancreatic Neoplasms, Integrin beta Chains genetics, Integrin beta Chains metabolism, Pancreatic Neoplasms metabolism
- Abstract
Pancreatic ductal adenocarcinoma (PDAC) is characterized by marked desmoplasia and drug resistance due, in part, to poor drug delivery to extravascular tumor tissue. Here, we report that carcinoma-associated fibroblasts (CAFs) induce β5 integrin expression in tumor cells in a TGF-β dependent manner, making them an efficient drug delivery target for the tumor-penetrating peptide iRGD. The capacity of iRGD to deliver conjugated and co-injected payloads is markedly suppressed when β5 integrins are knocked out in the tumor cells. Of note, β5 integrin knock-out in tumor cells leads to reduced disease burden and prolonged survival of the mice, demonstrating its contribution to PDAC progression. iRGD significantly potentiates co-injected chemotherapy in KPC mice with high β5 integrin expression and may be a powerful strategy to target an aggressive PDAC subpopulation.
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- 2021
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24. Effect of Diphtheria Toxin-Based Gene Therapy for Hepatocellular Carcinoma.
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Kamimura K, Yokoo T, Abe H, Sakai N, Nagoya T, Kobayashi Y, Ohtsuka M, Miura H, Sakamaki A, Kamimura H, Miyamura N, Nishina H, and Terai S
- Abstract
Hepatocellular carcinoma (HCC) is a major global malignancy, responsible for >90% of primary liver cancers. Currently available therapeutic options have poor performances due to the highly heterogeneous nature of the tumor cells; recurrence is highly probable, and some patients develop resistances to the therapies. Accordingly, the development of a novel therapy is essential. We assessed gene therapy for HCC using a diphtheria toxin fragment A (DTA) gene-expressing plasmid, utilizing a non-viral hydrodynamics-based procedure. The antitumor effect of DTA expression in HCC cell lines (and alpha-fetoprotein (AFP) promoter selectivity) is assessed in vitro by examining HCC cell growth. Moreover, the effect and safety of the AFP promoter-selective DTA expression was examined in vivo using an HCC mice model established by the hydrodynamic gene delivery of the yes-associated protein (YAP)-expressing plasmid. The protein synthesis in DTA transfected cells is inhibited by the disappearance of tdTomato and GFP expression co-transfected upon the delivery of the DTA plasmid; the HCC cell growth is inhibited by the expression of DTA in HCC cells in an AFP promoter-selective manner. A significant inhibition of HCC occurrence and the suppression of the tumor marker of AFP and des-gamma-carboxy prothrombin can be seen in mice groups treated with hydrodynamic gene delivery of DTA, both 0 and 2 months after the YAP gene delivery. These results suggest that DTA gene therapy is effective for HCC.
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- 2020
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25. Suppression of hyperexcitability of trigeminal nociceptive neurons associated with inflammatory hyperalgesia following systemic administration of lutein via inhibition of cyclooxygenase-2 cascade signaling.
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Syoji Y, Kobayashi R, Miyamura N, Hirohara T, Kubota Y, Uotsu N, Yui K, Shimazu Y, and Takeda M
- Abstract
Introduction: Lutein is a dietary constituent known to inhibit inflammation; however, its effect on nociceptive neuron-associated hyperalgesia remains to be determined. The present study therefore investigated under in vivo conditions whether administration of lutein attenuates the inflammation-induced hyperexcitability of trigeminal spinal nucleus caudalis (SpVc) neurons that is associated with mechanical hyperalgesia., Results: Complete Freund's adjuvant (CFA) was injected into the whisker pads of rats to induce inflammation, and then mechanical stimulation was applied to the orofacial area to assess the threshold of escape. The mechanical threshold was significantly lower in inflamed rats compared to uninjected naïve rats, and this lowered threshold was returned to control levels by 3 days after administration of lutein (10 mg/Kg, i.p.) Also the lutein administration, inflammation-induced thickness of edema was returned to control levels. The mean increased number of cyclooxygenase-2 (Cox-2)-immunoreactive cells in the whisker pads of inflamed rats was also returned to control levels by administration with lutein. The mean discharge frequency of SpVc wide-dynamic range (WDR) neurons to both nonnoxious and noxious mechanical stimuli in inflamed rats was significantly decreased after lutein administration. In addition, the increased mean spontaneous discharge of SpVc WDR in inflamed rats was significantly decreased after lutein administration. Similarly, lutein significantly diminished noxious pinch-evoked mean after discharge frequency and occurrence in inflamed rats. Finally, lutein restored the expanded mean size of the receptive field in inflamed rats to control levels., Conclusion: These results together suggest that administration of lutein attenuates inflammatory hyperalgesia associated with hyperexcitability of nociceptive SpVc WDR neurons via inhibition of the peripheral Cox-2 signaling cascade. These findings support the proposed potential of lutein as a therapeutic agent in complementary alternative medicine strategies for preventing inflammatory mechanical hyperalgesia., Competing Interests: The study was approved by the Animal Use and Care Committee of Azabu University and were consistent with the ethical guidelines of the International Association for the Study of Pain. Approved and written informed consent was obtained from all study subjects.We confirm that all the listed authors have approved the publication of this manuscript.The authors declare that they have no competing interests.Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
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- 2018
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26. Efficacy of Propidium Monoazide on Quantitative Real-Time PCR-Based Enumeration of Staphylococcus aureus Live Cells Treated with Various Sanitizers.
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Takahashi H, Kasuga R, Miya S, Miyamura N, Kuda T, and Kimura B
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- DNA, Bacterial, Food Microbiology, Propidium pharmacology, Real-Time Polymerase Chain Reaction, Anti-Infective Agents pharmacology, Azides pharmacology, Food Contamination analysis, Microbial Viability, Propidium analogs & derivatives, Staphylococcus aureus isolation & purification
- Abstract
Propidium monoazide (PMA) has been used together with quantitative real-time PCR (qPCR) to enumerate live bacteria, while discriminating against the residual DNA of dead bacterial cells. Although the effectiveness of PMA at increasing the accuracy of enumeration of live bacteria treated with heat has been investigated in a number of studies, few studies have involved bacteria treated with sanitizers. In this study, dead Staphylococcus aureus cells were prepared by treatment with six kinds of sanitizers (ethanol, isopropyl alcohol, benzalkonium chloride, sodium hypochlorite, hydrogen peroxide, and nisin) and were mixed with a culture of live bacteria in different ratios. PMA-qPCR was able to accurately enumerate live bacteria with a <0.5 CFU/500 μL difference with that of plate counts for cultures treated with ethanol, isopropyl alcohol, and nisin. For ethanol and isopropyl alcohol treatments, live cells were accurately enumerated for live/dead cell ratios of 10/1 to 0.01/1, while live cells for the nisin treatment were accurately enumerated for live/dead cell ratios of 10/1 to 0.1/1. In contrast, PMA-qPCR was not able to accurately enumerate live cells in bacterial cultures treated with benzalkonium chloride and hydrogen peroxide. In addition, qPCR without PMA was able to enumerate live cells as consistently as plate counts with a bacterial culture treated with sodium hypochlorite. The results of this study show that the use of PMA for qPCR-based enumeration of live cells is not always recommended, and its effectiveness depends on the treatment used on the cells.
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- 2018
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27. Novel YAP1 Activator, Identified by Transcription-Based Functional Screen, Limits Multiple Myeloma Growth.
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Maruyama J, Inami K, Michishita F, Jiang X, Iwasa H, Nakagawa K, Ishigami-Yuasa M, Kagechika H, Miyamura N, Hirayama J, Nishina H, Nogawa D, Yamamoto K, and Hata Y
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- Animals, Cell Line, Tumor, Cell Proliferation drug effects, Cell Survival drug effects, Drug Resistance, Neoplasm drug effects, Epithelial-Mesenchymal Transition drug effects, Gene Expression Regulation, Neoplastic drug effects, HEK293 Cells, Humans, K562 Cells, Mice, Multiple Myeloma genetics, Multiple Myeloma metabolism, Retinal Pigment Epithelium cytology, Retinal Pigment Epithelium drug effects, Retinal Pigment Epithelium metabolism, Small Molecule Libraries pharmacology, Transcription Factors metabolism, Xenograft Model Antitumor Assays, YAP-Signaling Proteins, Adaptor Proteins, Signal Transducing genetics, Adaptor Proteins, Signal Transducing metabolism, Multiple Myeloma drug therapy, Phosphoproteins genetics, Phosphoproteins metabolism, Small Molecule Libraries administration & dosage, Transcriptional Activation
- Abstract
Yes-associated protein 1 (YAP1) interacts with numerous transcription factors, including TEA-domain family proteins (TEAD) and p73. YAP1 is negatively regulated by the tumor suppressor Hippo pathway. In human cancers, the deregulation of the Hippo pathway and YAP1 gene amplification lead to the activation of YAP1, which induces epithelial-mesenchymal transition (EMT) and drug resistance. YAP1 inhibitors are expected to be useful in cancer therapy. On the other hand, in certain cancers, YAP1 upregulates p73-dependent gene transcription and behaves as a tumor suppressor. Moreover, as YAP1 regulates self-renewal and differentiation of tissue stem cells and plays an important role in tissue homeostasis, YAP1 activators may contribute to the regenerative medicine. With this in our mind, we screened for YAP1 activators by using human retinal pigment epithelial ARPE-19 cells expressing the TEAD-responsive fluorescence reporter under the coexpression of YAP1. From an extensive chemical compound library ( n = 18,606) 47 candidate YAP1 activators were identified. These compounds were characterized to determine whether this assay provides bona fide YAP1 activators. Importantly, one YAP1 activator was effective against the human multiple myeloma IM-9 cells and chronic myeloid leukemia K562 cells. Implications: YAP1 activation limits growth, induces apoptosis, and may be useful at suppressing hematological cancers. Mol Cancer Res; 16(2); 197-211. ©2017 AACR ., (©2017 American Association for Cancer Research.)
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- 2018
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28. Effect of a neural relay on liver regeneration in mice: activation of serotonin release from the gastrointestinal tract.
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Inoue R, Kamimura K, Nagoya T, Sakai N, Yokoo T, Goto R, Ogawa K, Shinagawa-Kobayashi Y, Watanabe-Mori Y, Sakamaki A, Abe S, Kamimura H, Miyamura N, Nishina H, and Terai S
- Abstract
The development of therapeutic options to promote hepatic regeneration following severe liver injury is essential. While humoral factors have been reported as mechanisms of liver regeneration, the contributions of interorgan communication to liver regeneration have not been reported. In this study, we examined the effect of a neural relay on liver regeneration via activation of serotonin release from the gastrointestinal (GI) tract. Our results demonstrated that the afferent visceral nerve from the liver activates the efferent vagus nerve from the brain, leading to activation of serotonin release from the GI tract and contributing to liver regeneration. While it is difficult to apply these results directly to human health, we believe that this study may represent a step toward developing essential therapeutics to promote liver regeneration.
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- 2018
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29. YAP regulates liver size and function.
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Miyamura N and Nishina H
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- Adaptor Proteins, Signal Transducing, Animals, Cell Cycle Proteins, Liver, Mice, Phosphoproteins, YAP-Signaling Proteins, Hepatocytes, Liver Regeneration
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- 2018
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30. Endosomal phosphatidylserine is critical for the YAP signalling pathway in proliferating cells.
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Matsudaira T, Mukai K, Noguchi T, Hasegawa J, Hatta T, Iemura SI, Natsume T, Miyamura N, Nishina H, Nakayama J, Semba K, Tomita T, Murata S, Arai H, and Taguchi T
- Subjects
- Animals, Biotinylation, COS Cells, Cell Nucleus metabolism, Cell Proliferation, Chlorocebus aethiops, Endosomes metabolism, Gene Knockdown Techniques, HEK293 Cells, Humans, Phosphorylation, Protein Transport genetics, Signal Transduction, Transcription Factors, Ubiquitination, YAP-Signaling Proteins, Adaptor Proteins, Signal Transducing metabolism, Adenosine Triphosphatases genetics, Membrane Proteins genetics, Phosphatidylserines metabolism, Phospholipid Transfer Proteins genetics, Phosphoproteins metabolism, Protein Serine-Threonine Kinases metabolism
- Abstract
Yes-associated protein (YAP) is a recently discovered growth-promoting transcription coactivator that has been shown to regulate the malignancy of various cancers. How YAP is regulated is not fully understood. Here, we show that one of the factors regulating YAP is phosphatidylserine (PS) in recycling endosomes (REs). We use proximity biotinylation to find proteins proximal to PS. Among these proteins are YAP and multiple proteins related to YAP signalling. Knockdown of ATP8A1 (an RE PS-flippase) or evectin-2 (an RE-resident protein) and masking of PS in the cytoplasmic leaflet of membranes, all suppress nuclear localization of YAP and YAP-dependent transcription. ATP8A1 knockdown increases the phosphorylated (activated) form of Lats1 that phosphorylates and inactivates YAP, whereas evectin-2 knockdown reduces the ubiquitination and increased the level of Lats1. The proliferation of YAP-dependent metastatic cancer cells is suppressed by knockdown of ATP8A1 or evectin-2. These results suggest a link between a membrane phospholipid and cell proliferation.
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- 2017
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31. Erratum: YAP determines the cell fate of injured mouse hepatocytes in vivo.
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Miyamura N, Hata S, Itoh T, Tanaka M, Nishio M, Itoh M, Ogawa Y, Terai S, Sakaida I, Suzuki A, Miyajima A, and Nishina H
- Abstract
This corrects the article DOI: 10.1038/ncomms16017.
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- 2017
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32. Age-dependent motor dysfunction due to neuron-specific disruption of stress-activated protein kinase MKK7.
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Yamasaki T, Deki-Arima N, Kaneko A, Miyamura N, Iwatsuki M, Matsuoka M, Fujimori-Tonou N, Okamoto-Uchida Y, Hirayama J, Marth JD, Yamanashi Y, Kawasaki H, Yamanaka K, Penninger JM, Shibata S, and Nishina H
- Subjects
- Age Factors, Animals, Brain diagnostic imaging, Brain metabolism, Brain physiopathology, Circadian Rhythm genetics, Disease Models, Animal, Disease Progression, Gene Deletion, JNK Mitogen-Activated Protein Kinases metabolism, MAP Kinase Kinase 7 genetics, MAP Kinase Signaling System, Male, Mice, Mice, Transgenic, Motor Activity, Motor Disorders diagnosis, Organ Specificity, Rats, MAP Kinase Kinase 7 metabolism, Motor Disorders etiology, Motor Disorders metabolism, Neurons metabolism, Stress, Physiological
- Abstract
c-Jun N-terminal kinase (JNK) is a member of the mitogen-activated protein kinase family and controls various physiological processes including apoptosis. A specific upstream activator of JNKs is the mitogen-activated protein kinase kinase 7 (MKK7). It has been reported that MKK7-JNK signaling plays an important regulatory role in neural development, however, post-developmental functions in the nervous system have not been elucidated. In this study, we generated neuron-specific Mkk7 knockout mice (MKK7 cKO), which impaired constitutive activation of JNK in the nervous system. MKK7 cKO mice displayed impaired circadian behavioral rhythms and decreased locomotor activity. MKK7 cKO mice at 8 months showed motor dysfunctions such as weakness of hind-limb and gait abnormality in an age-dependent manner. Axonal degeneration in the spinal cord and muscle atrophy were also observed, along with accumulation of the axonal transport proteins JNK-interacting protein 1 and amyloid beta precursor protein in the brains and spinal cords of MKK7 cKO mice. Thus, the MKK7-JNK signaling pathway plays important roles in regulating circadian rhythms and neuronal maintenance in the adult nervous system.
- Published
- 2017
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33. YAP determines the cell fate of injured mouse hepatocytes in vivo.
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Miyamura N, Hata S, Itoh T, Tanaka M, Nishio M, Itoh M, Ogawa Y, Terai S, Sakaida I, Suzuki A, Miyajima A, and Nishina H
- Subjects
- Adaptor Proteins, Signal Transducing metabolism, Animals, Carbon Tetrachloride toxicity, Cell Cycle Proteins, Cell Movement drug effects, Chemical and Drug Induced Liver Injury etiology, Chemical and Drug Induced Liver Injury metabolism, Chemical and Drug Induced Liver Injury pathology, Ethanol toxicity, Fluorescent Antibody Technique, Gene Expression Regulation, Hepatocytes drug effects, Hepatocytes pathology, Hippo Signaling Pathway, Kupffer Cells cytology, Kupffer Cells drug effects, Kupffer Cells metabolism, Liver drug effects, Liver pathology, Male, Mice, Mice, Inbred C57BL, Mice, Transgenic, Monocrotaline toxicity, Phagocytosis drug effects, Phosphoproteins metabolism, Protein Serine-Threonine Kinases metabolism, Signal Transduction, YAP-Signaling Proteins, cdc42 GTP-Binding Protein metabolism, rac GTP-Binding Proteins genetics, rac GTP-Binding Proteins metabolism, Adaptor Proteins, Signal Transducing genetics, Chemical and Drug Induced Liver Injury genetics, Hepatocytes metabolism, Liver metabolism, Phosphoproteins genetics, Protein Serine-Threonine Kinases genetics, cdc42 GTP-Binding Protein genetics
- Abstract
The presence of senescent, transformed or damaged cells can impair tissue function or lead to tumorigenesis; therefore, organisms have evolved quality control mechanisms to eliminate them. Here, we show that YAP activation induced by inactivation of the Hippo pathway specifically in damaged hepatocytes promotes their selective elimination by using in vivo mosaic analysis in mouse liver. These damaged hepatocytes migrate into the hepatic sinusoids, undergo apoptosis and are engulfed by Kupffer cells. In contrast, YAP activation in undamaged hepatocytes leads to proliferation. Cellular stresses such as ethanol that damage both liver sinusoidal endothelial cells and hepatocytes switch cell fate from proliferation to migration/apoptosis in the presence of activated YAP. This involves the activation of CDC42 and Rac that regulate cell migration. Thus, we suggest that YAP acts as a stress sensor that induces elimination of injured cells to maintain tissue and organ homeostasis.
- Published
- 2017
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34. Development and evaluation of a quantitative assay detecting cytomegalovirus transcripts for preemptive therapy in allogeneic hematopoietic stem cell transplant recipients.
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Ishii K, Onishi Y, Miyamura N, Fukuhara N, Ishizawa K, Nakanishi M, Ohnaka S, Miyasaka T, Kanno E, Kawakami K, Harigae H, and Kaku M
- Subjects
- Adolescent, Adult, Animals, Antiviral Agents therapeutic use, Chlorocebus aethiops, Cytomegalovirus isolation & purification, Cytomegalovirus Infections drug therapy, Cytomegalovirus Infections virology, DNA, Viral genetics, DNA, Viral isolation & purification, Female, Humans, Male, Middle Aged, Nucleic Acid Amplification Techniques, RNA, Viral genetics, Real-Time Polymerase Chain Reaction, Transplant Recipients, Vero Cells, Young Adult, Cytomegalovirus genetics, Cytomegalovirus Infections diagnosis, Cytomegalovirus Infections prevention & control, Hematopoietic Stem Cell Transplantation, RNA, Viral blood
- Abstract
Successful preemptive therapy for cytomegalovirus (CMV) infection after hematopoietic stem cell transplantation (HSCT) depends on the availability of a rapid and sensitive assay to guide early treatment. Currently, the antigenemia assay and the quantitative real-time PCR (qPCR) assay are widely used for this purpose, but they have distinctive concerns. This study aimed to develop and evaluate a novel CMV diagnostic test based on transcription-reverse transcription concerted reaction (TRC), an RNA-detecting technology. The CMV-TRC assay detected CMV β2.7 transcripts within 10 min over a five-log range. Among a total of 219 samples obtained from 24 allogeneic HSCT recipients, samples detected as positive by the CMV-TRC assay showed a relatively strong correlation with those detected as positive by the qPCR assay and the antigenemia assay. The CMV-TRC assay showed higher sensitivity (77.7%) than the antigenemia assay (68.1%) and detected the first and recurrent episodes of active CMV infection in HSCT patients significantly earlier than the antigenemia assay (P < 0.001). Although the CMV-TRC assay (87.8%) showed low sensitivity compared to the qPCR assay (96.3%), the performance of the CMV-TRC assay was equivalent to that of the qPCR assay in detecting the appearance of active CMV infection episodes (P < 0.092) or rather superior in detecting the clearance of episodes (P < 0.001). The CMV-TRC assay with several advantages may be useful for guiding preemptive anti-CMV therapy in HSCT recipients., (© 2017 Wiley Periodicals, Inc.)
- Published
- 2017
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35. Development of quantitative real-time PCR for detection and enumeration of Enterobacteriaceae.
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Takahashi H, Saito R, Miya S, Tanaka Y, Miyamura N, Kuda T, and Kimura B
- Subjects
- Colony Count, Microbial, DNA Primers, Hygiene, Linear Models, Reproducibility of Results, Sensitivity and Specificity, Enterobacteriaceae isolation & purification, Food Microbiology methods, Real-Time Polymerase Chain Reaction methods
- Abstract
The family Enterobacteriaceae, members of which are widely distributed in the environment, includes many important human pathogens. In this study, a rapid real-time PCR method targeting rplP, coding for L16 protein, a component of the ribosome large subunit, was developed for enumerating Enterobacteriaceae strains, and its efficiency was evaluated using naturally contaminated food products. The rplP-targeted real-time PCR amplified Enterobacteriaceae species with Ct values of 14.0-22.8, whereas the Ct values for non-Enterobacteriaceae species were >30, indicating the specificity of this method for the Enterobacteriaceae. Using a calibration curve of Ct=-3.025 (log CFU/g)+37.35, which was calculated from individual plots of the cell numbers in different concentrations of 5 Enterobacteriaceae species, the rplP-targeted real-time PCR was applied to 51 food samples. A <1log difference between the real-time PCR and culture methods was obtained in a majority of the food samples (81.8%), with good correlation (r
2 =0.8285). This study demonstrated that the rplP-targeted real-time PCR method could detect and enumerate Enterobacteriaceae species in foods rapidly and accurately, and therefore, it can be used for the microbiological risk analysis of foods., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2017
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36. The mevalonate pathway regulates primitive streak formation via protein farnesylation.
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Okamoto-Uchida Y, Yu R, Miyamura N, Arima N, Ishigami-Yuasa M, Kagechika H, Yoshida S, Hosoya T, Nawa M, Kasama T, Asaoka Y, Alois RW, Elling U, Penninger JM, Nishina S, Azuma N, and Nishina H
- Subjects
- Animals, Cell Differentiation, Down-Regulation genetics, Embryoid Bodies, Gene Expression Regulation, Developmental, Metabolome, Metabolomics, Mice, Inbred ICR, Myocytes, Cardiac cytology, Myocytes, Cardiac metabolism, Neurogenesis, Oligonucleotide Array Sequence Analysis, Organogenesis, Zebrafish, Metabolic Networks and Pathways, Mevalonic Acid metabolism, Primitive Streak embryology, Primitive Streak metabolism, Protein Prenylation
- Abstract
The primitive streak in peri-implantation embryos forms the mesoderm and endoderm and controls cell differentiation. The metabolic cues regulating primitive streak formation remain largely unknown. Here we utilised a mouse embryonic stem (ES) cell differentiation system and a library of well-characterised drugs to identify these metabolic factors. We found that statins, which inhibit the mevalonate metabolic pathway, suppressed primitive streak formation in vitro and in vivo. Using metabolomics and pharmacologic approaches we identified the downstream signalling pathway of mevalonate and revealed that primitive streak formation requires protein farnesylation but not cholesterol synthesis. A tagging-via-substrate approach revealed that nuclear lamin B1 and small G proteins were farnesylated in embryoid bodies and important for primitive streak gene expression. In conclusion, protein farnesylation driven by the mevalonate pathway is a metabolic cue essential for primitive streak formation.
- Published
- 2016
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37. Diagnosis and treatment of adrenal insufficiency including adrenal crisis: a Japan Endocrine Society clinical practice guideline [Opinion].
- Author
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Yanase T, Tajima T, Katabami T, Iwasaki Y, Tanahashi Y, Sugawara A, Hasegawa T, Mune T, Oki Y, Nakagawa Y, Miyamura N, Shimizu C, Otsuki M, Nomura M, Akehi Y, Tanabe M, and Kasayama S
- Subjects
- Adrenocorticotropic Hormone analysis, Adrenocorticotropic Hormone blood, Adult, Clinical Laboratory Techniques methods, Clinical Laboratory Techniques standards, Corticotropin-Releasing Hormone blood, Female, Humans, Hydrocortisone blood, Insulin blood, Japan, Pituitary-Adrenal Function Tests methods, Pituitary-Adrenal Function Tests standards, Pregnancy, Societies, Medical, Adrenal Insufficiency diagnosis, Adrenal Insufficiency therapy
- Abstract
This clinical practice guideline of the diagnosis and treatment of adrenal insufficiency (AI) including adrenal crisis was produced on behalf of the Japan Endocrine Society. This evidence-based guideline was developed by a committee including all authors, and was reviewed by a subcommittee of the Japan Endocrine Society. The Japanese version has already been published, and the essential points have been summarized in this English language version. We recommend diagnostic tests, including measurement of basal cortisol and ACTH levels in combination with a rapid ACTH (250 μg corticotropin) test, the CRH test, and for particular situations the insulin tolerance test. Cut-off values in basal and peak cortisol levels after the rapid ACTH or CRH tests are proposed based on the assumption that a peak cortisol level ≥18 μg/dL in the insulin tolerance test indicates normal adrenal function. In adult AI patients, 15-25 mg hydrocortisone (HC) in 2-3 daily doses, depending on adrenal reserve and body weight, is a basic replacement regime for AI. In special situations such as sickness, operations, pregnancy and drug interactions, cautious HC dosing or the correct choice of glucocorticoids is necessary. From long-term treatment, optimal diurnal rhythm and concentration of serum cortisol are important for the prevention of cardiovascular disease and osteoporosis. In maintenance therapy during the growth period of patients with 21-hydroxylase deficiency, proper doses of HC should be used, and long-acting glucocorticoids should not be used. Education and carrying an emergency card are essential for the prevention and rapid treatment of adrenal crisis.
- Published
- 2016
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38. MDCK cells expressing constitutively active Yes-associated protein (YAP) undergo apical extrusion depending on neighboring cell status.
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Chiba T, Ishihara E, Miyamura N, Narumi R, Kajita M, Fujita Y, Suzuki A, Ogawa Y, and Nishina H
- Subjects
- Adaptor Proteins, Signal Transducing genetics, Animals, Cell Communication, Dogs, Filamins metabolism, Humans, Madin Darby Canine Kidney Cells, Microscopy, Fluorescence, Phosphatidylinositol 3-Kinases metabolism, Phosphoproteins genetics, Protein Binding, Protein Domains, Ribosomal Protein S6 Kinases, 70-kDa metabolism, Trans-Activators genetics, Transcription Factors, Vimentin metabolism, YAP-Signaling Proteins, ras Proteins metabolism, src-Family Kinases metabolism, Adaptor Proteins, Signal Transducing metabolism, Gene Expression Regulation, Phosphoproteins metabolism, Trans-Activators metabolism
- Abstract
Cell competition is a cell-cell interaction by which a cell compares its fitness to that of neighboring cells. The cell with the relatively lower fitness level is the "loser" and actively eliminated, while the cell with the relatively higher fitness level is the "winner" and survives. Recent studies have shown that cells with high Yes-associated protein (YAP) activity win cell competitions but the mechanism is unknown. Here, we report the unexpected finding that cells overexpressing constitutively active YAP undergo apical extrusion and are losers, rather than winners, in competitions with normal mammalian epithelial cells. Inhibitors of metabolism-related proteins such as phosphoinositide-3-kinase (PI3K), mammalian target of rapamycin (mTOR), or p70S6 kinase (p70S6K) suppressed this apical extrusion, as did knockdown of vimentin or filamin in neighboring cells. Interestingly, YAP-overexpressing cells switched from losers to winners when co-cultured with cells expressing K-Ras (G12V) or v-Src. Thus, the role of YAP in deciding cell competitions depends on metabolic factors and the status of neighboring cells.
- Published
- 2016
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39. Coexistence of resistance to thyroid hormone and papillary thyroid carcinoma.
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Igata M, Tsuruzoe K, Kawashima J, Kukidome D, Kondo T, Motoshima H, Shimoda S, Furukawa N, Nishikawa T, Miyamura N, and Araki E
- Abstract
Unlabelled: Resistance to thyroid hormone (RTH) is a syndrome of reduced tissue responsiveness to thyroid hormones. RTH is majorly caused by mutations in the thyroid hormone receptor beta (THRB) gene. Recent studies indicated a close association of THRB mutations with human cancers, but the role of THRB mutation in carcinogenesis is still unclear. Here, we report a rare case of RTH with a papillary thyroid carcinoma (PTC). A 26-year-old woman was referred to our hospital due to a thyroid tumor and hormonal abnormality. She had elevated serum thyroid hormones and non-suppressed TSH levels. Genetic analysis of THRB identified a missense mutation, P452L, leading to a diagnosis of RTH. Ultrasound-guided fine-needle aspiration biopsy of the tumor and lymph nodes enabled the cytological diagnosis of PTC with lymph node metastases. Total thyroidectomy and neck lymph nodes dissection were performed. Following surgery, thyroxine replacement (≥500 μg) was necessary to avoid the symptoms of hypothyroidism and to maintain her TSH levels within the same range as before the operation. During the follow-up, basal thyroglobulin (Tg) levels were around 6 ng/ml and TSH-stimulated Tg levels were between 12 and 20 ng/ml. Up to present, the patient has had no recurrence of PTC. This indicates that these Tg values are consistent with a biochemical incomplete response or an indeterminate response. There is no consensus regarding the management of thyroid carcinoma in patients with RTH, but aggressive treatments such as total thyroidectomy followed by radioiodine (RAI) and TSH suppression therapy are recommended., Learning Points: There are only a few cases reporting the coexistence of RTH and thyroid carcinoma. Moreover, our case would be the first case presenting one with lymph node metastases.Recent studies indicated a close association of THRB mutations with human cancers, but the role of THRB mutation in carcinogenesis is still unclear.When total thyroidectomy is performed in patients with RTH, a large amount of thyroxine is needed to maintain their thyroid function.There is no consensus regarding the management of thyroid carcinoma in patient with RTH, but effective treatments such as total thyroidectomy followed by RAI and TSH suppression therapy are recommended.
- Published
- 2016
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40. Structure-CaSR-Activity Relation of Kokumi γ-Glutamyl Peptides.
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Amino Y, Nakazawa M, Kaneko M, Miyaki T, Miyamura N, Maruyama Y, and Eto Y
- Subjects
- Animals, HEK293 Cells, Humans, Molecular Conformation, Oocytes metabolism, Receptors, Calcium-Sensing metabolism, Structure-Activity Relationship, Xenopus, Oligopeptides chemistry, Oligopeptides pharmacology, Receptors, Calcium-Sensing agonists
- Abstract
Modulation of the calcium sensing receptor (CaSR) is one of the physiological activities of γ-glutamyl peptides such as glutathione (γ-glutamylcysteinylglycine). γ-Glutamyl peptides also possess a flavoring effect, i.e., sensory activity of kokumi substances, which modifies the five basic tastes when added to food. These activities have been shown to be positively correlated, suggesting that kokumi γ-glutamyl peptides are perceived through CaSRs in humans. Our research is based on the hypothesis that the discovery of highly active CaSR agonist peptides will lead to the creation of practical kokumi peptides. Through continuous study of the structure-CaSR-activity relation of a large number of γ-glutamyl peptides, we have determined that the structural requirements for intense CaSR activity of γ-glutamyl peptides are as follows: existence of an N-terminal γ-L-glutamyl residue; existence of a moderately sized, aliphatic, neutral substituent at the second residue in an L-configuration; and existence of a C-terminal carboxylic acid, preferably with the existence of glycine as the third constituent. By the sensory analysis of γ-glutamyl peptides selected by screening using the CaSR activity assay, γ-glutamylvalylglycine was found to be a potent kokumi peptide. Furthermore, norvaline-containing γ-glutamyl peptides, i.e., γ-glutamylnorvalylglycine and γ-glutamylnorvaline, possessed excellent sensory activity of kokumi substances. A novel, practical industrial synthesis of regiospecific γ-glutamyl peptides is also required for their commercialization, which was achieved through the ring opening reaction of N-α-carbobenzoxy-L-glutamic anhydride and amino acids or peptides in the presence of N-hydroxysuccinimide.
- Published
- 2016
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41. A case of hepatitis C-associated osteosclerosis: accelerated bone turnover controlled by pulse steroid therapy.
- Author
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Miyamura N, Nishida S, Itasaka M, Matsuda H, Ohtou T, Yamaguchi Y, Inaba D, Tamiya S, and Nakano T
- Abstract
Hepatitis C-associated osteosclerosis (HCAO), a very rare disorder in which an extremely rapid bone turnover occurs and results in osteosclerosis, was acknowledged in 1990s as a new clinical entity with the unique bone disorder and definite link to chronic type C hepatitis, although the pathogenesis still remains unknown. Affected patients suffer from excruciating deep bone pains. We report the 19th case of HCAO with diagnosis confirmed by bone biopsy, and treated initially with a bisphosphonate, next with corticosteroids and finally with direct acting antivirals (DAA: sofosbuvir and ribavirin) for HCV infection. Risedronate, 17.5 mg/day for 38 days, did not improve the patient's symptoms or extremely elevated levels of bone markers, which indicated hyper-bone-formation and coexisting hyper-bone-resorption in the patient. Next, intravenous methylprednisolone pulse therapy followed by high-dose oral administration of prednisolone evidently improved them. DAA therapy initiated after steroid therapy successfully achieved sustained virological response, but no additional therapeutic effect on them was observed. Our results strongly suggested that the underlying immunological alteration is the crucial key to clarify the pathogenesis of HCAO. Bone mineral density of lumbar vertebrae of the patient was increased by 14% in four-month period of observation. Clarification of the mechanisms that develop osteosclerosis in HCAO might lead to a new therapeutic perspective for osteoporosis., Learning Points: HCAO is an extremely rare bone disorder, which occurs exclusively in patients affected with HCV, of which only 18 cases have been reported since 1992 and pathogenesis still remains unclear.Pathophysiology of HCAO is highly accelerated rates of both bone formation and bone resorption, with higher rate of formation than that of resorption, which occur in general skeletal leading to the diffuse osteosclerosis with severe bone pains.Steroid therapy including intravenous pulse administration in our patient evidently ameliorated his bone pains and reduced elevated values of bone markers. This was the first successful treatment for HCAO among cases reported so far and seemed to propose a key to solve the question for its pathogenesis.The speed of increase in the bone mineral content of the patient was very high, suggesting that clarification of the mechanism(s) might lead to the development of a novel therapy for osteoporosis.
- Published
- 2016
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42. A Modified Murine Embryonic Stem Cell Test for Evaluating the Teratogenic Effects of Drugs on Early Embryogenesis.
- Author
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Yu R, Miyamura N, Okamoto-Uchida Y, Arima N, Ishigami-Yuasa M, Kagechika H, and Nishina H
- Subjects
- Animals, Biomarkers metabolism, Cell Differentiation drug effects, Embryoid Bodies drug effects, Embryoid Bodies physiology, Embryonic Development drug effects, Gene Expression drug effects, Mice, Mouse Embryonic Stem Cells physiology, Teratogenesis, Teratogens classification, Toxicity Tests, Benzodiazepines toxicity, Mouse Embryonic Stem Cells drug effects, Teratogens toxicity, Tretinoin toxicity
- Abstract
Mammalian fetal development is easily disrupted by exogenous agents, making it essential to test new drug candidates for embryotoxicity and teratogenicity. To standardize the testing of drugs that might be used to treat pregnant women, the U.S. Food and Drug Administration (FDA) formulated special grade categories, labeled A, B, C, D and X, that define the level of risk associated with the use of a specific drug during pregnancy. Drugs in categories (Cat.) D and X are those with embryotoxic and/or teratogenic effects on humans and animals. However, which stages of pregnancy are affected by these agents and their molecular mechanisms are unknown. We describe here an embryonic stem cell test (EST) that classifies FDA pregnancy Cat.D and Cat.X drugs into 4 classes based on their differing effects on primitive streak formation. We show that ~84% of Cat.D and Cat.X drugs target this period of embryogenesis. Our results demonstrate that our modified EST can identify how a drug affects early embryogenesis, when it acts, and its molecular mechanism. Our test may thus be a useful addition to the drug safety testing armamentarium.
- Published
- 2015
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43. Determination and quantification of kokumi peptide, γ-glutamyl-valyl-glycine, in brewed alcoholic beverages.
- Author
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Miyamura N, Iida Y, Kuroda M, Kato Y, Yamazaki J, Mizukoshi T, and Miyano H
- Subjects
- Aminoquinolines chemistry, Carbamates chemistry, Chromatography, High Pressure Liquid, Humans, Oligopeptides chemistry, Succinimides chemistry, Tandem Mass Spectrometry, Wine analysis, Beer analysis, Oligopeptides analysis
- Abstract
Recently, it has been demonstrated that kokumi substances such as glutathione are perceived through the calcium-sensing receptor (CaSR), and screening by CaSR assay and sensory evaluation has shown that γ-glutamyl-valyl-glycine (γ-Glu-Val-Gly) is a potent kokumi peptide. In this study, γ-Glu-Val-Gly contents in various brewed alcoholic beverages were investigated. Contents of γ-Glu-Val-Gly in four brands of wine, four brands of rice wine (sake) and eight brands of beer were analyzed by high performance liquid chromatography-tandem mass spectrometry followed by derivatization with 6-aminoquinoyl-N-hydroxysuccinimidyl-carbamate. The analyses indicated that γ-Glu-Val-Gly was present in all of eight beer samples at concentrations in the range of 0.08-0.18 mg/L, although the peptide was not detected in any wine or rice wine samples. These results suggest that amongst the brewed beverages tested, beer contains γ-Glu-Val-Gly, and that γ-Glu-Val-Gly is widely distributed in beer., (Copyright © 2015 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.)
- Published
- 2015
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44. Genome sequence determination and metagenomic characterization of a Dehalococcoides mixed culture grown on cis-1,2-dichloroethene.
- Author
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Yohda M, Yagi O, Takechi A, Kitajima M, Matsuda H, Miyamura N, Aizawa T, Nakajima M, Sunairi M, Daiba A, Miyajima T, Teruya M, Teruya K, Shiroma A, Shimoji M, Tamotsu H, Juan A, Nakano K, Aoyama M, Terabayashi Y, Satou K, and Hirano T
- Subjects
- Base Sequence, Biodegradation, Environmental, Chlorine metabolism, Chloroflexi growth & development, Chloroflexi isolation & purification, Ethylenes metabolism, Genes, rRNA genetics, Halogenation, Microbial Consortia physiology, Oxidation-Reduction, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Chloroflexi genetics, Chloroflexi metabolism, Dichloroethylenes metabolism, Genome, Bacterial genetics, Metagenomics, Microbial Consortia genetics
- Abstract
A Dehalococcoides-containing bacterial consortium that performed dechlorination of 0.20 mM cis-1,2-dichloroethene to ethene in 14 days was obtained from the sediment mud of the lotus field. To obtain detailed information of the consortium, the metagenome was analyzed using the short-read next-generation sequencer SOLiD 3. Matching the obtained sequence tags with the reference genome sequences indicated that the Dehalococcoides sp. in the consortium was highly homologous to Dehalococcoides mccartyi CBDB1 and BAV1. Sequence comparison with the reference sequence constructed from 16S rRNA gene sequences in a public database showed the presence of Sedimentibacter, Sulfurospirillum, Clostridium, Desulfovibrio, Parabacteroides, Alistipes, Eubacterium, Peptostreptococcus and Proteocatella in addition to Dehalococcoides sp. After further enrichment, the members of the consortium were narrowed down to almost three species. Finally, the full-length circular genome sequence of the Dehalococcoides sp. in the consortium, D. mccartyi IBARAKI, was determined by analyzing the metagenome with the single-molecule DNA sequencer PacBio RS. The accuracy of the sequence was confirmed by matching it to the tag sequences obtained by SOLiD 3. The genome is 1,451,062 nt and the number of CDS is 1566, which includes 3 rRNA genes and 47 tRNA genes. There exist twenty-eight RDase genes that are accompanied by the genes for anchor proteins. The genome exhibits significant sequence identity with other Dehalococcoides spp. throughout the genome, but there exists significant difference in the distribution RDase genes. The combination of a short-read next-generation DNA sequencer and a long-read single-molecule DNA sequencer gives detailed information of a bacterial consortium., (Copyright © 2014 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
45. Analysis of the Interaction between Clopidogrel, Aspirin, and Proton Pump Inhibitors Using the FDA Adverse Event Reporting System Database.
- Author
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Suzuki Y, Suzuki H, Umetsu R, Uranishi H, Abe J, Nishibata Y, Sekiya Y, Miyamura N, Hara H, Tsuchiya T, Kinosada Y, and Nakamura M
- Subjects
- Adverse Drug Reaction Reporting Systems, Aspirin therapeutic use, Clopidogrel, Drug Therapy, Combination, Female, Gastrointestinal Hemorrhage etiology, Humans, Male, Odds Ratio, Platelet Aggregation Inhibitors adverse effects, Proton Pump Inhibitors therapeutic use, Risk Factors, Ticlopidine adverse effects, Ticlopidine therapeutic use, United States, United States Food and Drug Administration, Aspirin adverse effects, Drug Interactions, Embolism prevention & control, Gastrointestinal Hemorrhage prevention & control, Proton Pump Inhibitors adverse effects, Thrombosis prevention & control, Ticlopidine analogs & derivatives
- Abstract
Clopidogrel is an antiplatelet agent widely used in combination with aspirin to limit the occurrence of cardiovascular (embolic/thrombotic) events. Consensus guidelines recommend proton pump inhibitors (PPIs) as a gastrointestinal (GI) prophylactic measure for all patients receiving dual antiplatelet therapy with clopidogrel and aspirin. The objective of this study was to analyze the effect of the simultaneous use of clopidogrel, aspirin, and PPIs on hemorrhagic and embolic/thrombotic events using the U.S. Food and Drug Administration (FDA) Adverse Event Reporting System (FAERS) database. Reports of hemorrhagic and embolic/thrombotic events between 2004 and 2013 were analyzed with a reporting odds ratio (ROR) algorithm and logistic regression methods. The Medical Dictionary for Regulatory Activities Preferred Terms was used to identify such events. Regarding hemorrhagic events, the adjusted RORs of the concomitant use of aspirin and clopidogrel and those of PPIs prescribed with aspirin and clopidogrel were 4.40 (95% confidence interval [CI], 4.02-4.81) and 3.40 (95% CI, 2.84-4.06), respectively. For embolic/thrombotic events, the adjusted RORs of the concomitant use of aspirin and clopidogrel and those of PPIs prescribed with aspirin and clopidogrel were 2.37 (95% CI, 2.16-2.59) and 2.38 (95% CI, 2.00-2.84), respectively. Among patients included in the FAERS database, the concurrent use of aspirin and clopidogrel with PPIs reduced the adjusted ROR of GI hemorrhagic events. PPIs had little influence on the adjusted ROR of embolic/thrombotic events. These results support the use of PPIs as a preventive measure against GI hemorrhagic events for patients receiving clopidogrel and aspirin.
- Published
- 2015
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- View/download PDF
46. Identification of suicide-related events through network analysis of adverse event reports.
- Author
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Nazir A, Ichinomiya T, Miyamura N, Sekiya Y, and Kinosada Y
- Subjects
- Algorithms, Databases, Pharmaceutical, Depression psychology, Depression therapy, Humans, Risk Factors, Suicide psychology, United States, United States Food and Drug Administration, Suicide Prevention, Adverse Drug Reaction Reporting Systems, Selective Serotonin Reuptake Inhibitors adverse effects, Suicide statistics & numerical data
- Abstract
Background: In the treatment of depression, it is essential to monitor for early warnings of suicide., Objective: The aim of this study was to identify the symptoms that would suggest a high suicide risk by analyzing data obtained from the US Food and Drug Administration Adverse Event Reporting System (FAERS) of selective serotonin reuptake inhibitors., Methods: Using FAERS reports from 1997 to the second quarter of 2012, we constructed the co-occurrence network of adverse events. From this network, we extracted the events that were strongly connected to suicidal events (suicidal attempts, suicidal ideation, suicidal behavior, and complete suicide) by means of the community detection method., Results: We succeeded in obtaining a list of suicide-related adverse events. Owing to the randomness inherent in the algorithms of community detection, we found that the obtained list differed according to each trial of analysis. However, the lists we derived show considerable efficiency in identifying suicidal events., Conclusion: The network analysis appears to be a promising method for identifying signals of suicide.
- Published
- 2014
- Full Text
- View/download PDF
47. The PDZ-binding motif of Yes-associated protein is required for its co-activation of TEAD-mediated CTGF transcription and oncogenic cell transforming activity.
- Author
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Shimomura T, Miyamura N, Hata S, Miura R, Hirayama J, and Nishina H
- Subjects
- Amino Acid Motifs, Animals, Cell Nucleus metabolism, Cell Transformation, Neoplastic pathology, Cells, Cultured, Connective Tissue Growth Factor metabolism, HEK293 Cells, Humans, Liver metabolism, Mice, Mice, Inbred C57BL, NIH 3T3 Cells, Nuclear Localization Signals metabolism, Protein Binding, Protein Transport, Sequence Deletion, Structure-Activity Relationship, TEA Domain Transcription Factors, YAP-Signaling Proteins, Adaptor Proteins, Signal Transducing chemistry, Adaptor Proteins, Signal Transducing metabolism, Cell Transformation, Neoplastic metabolism, Connective Tissue Growth Factor genetics, DNA-Binding Proteins metabolism, Oncogenes, Phosphoproteins chemistry, Phosphoproteins metabolism, Transcription Factors metabolism, Transcription, Genetic
- Abstract
YAP is a transcriptional co-activator that acts downstream of the Hippo signaling pathway and regulates multiple cellular processes, including proliferation. Hippo pathway-dependent phosphorylation of YAP negatively regulates its function. Conversely, attenuation of Hippo-mediated phosphorylation of YAP increases its ability to stimulate proliferation and eventually induces oncogenic transformation. The C-terminus of YAP contains a highly conserved PDZ-binding motif that regulates YAP's functions in multiple ways. However, to date, the importance of the PDZ-binding motif to the oncogenic cell transforming activity of YAP has not been determined. In this study, we disrupted the PDZ-binding motif in the YAP (5SA) protein, in which the sites normally targeted by Hippo pathway-dependent phosphorylation are mutated. We found that loss of the PDZ-binding motif significantly inhibited the oncogenic transformation of cultured cells induced by YAP (5SA). In addition, the increased nuclear localization of YAP (5SA) and its enhanced activation of TEAD-dependent transcription of the cell proliferation gene CTGF were strongly reduced when the PDZ-binding motif was deleted. Similarly, in mouse liver, deletion of the PDZ-binding motif suppressed nuclear localization of YAP (5SA) and YAP (5SA)-induced CTGF expression. Taken together, our results indicate that the PDZ-binding motif of YAP is critical for YAP-mediated oncogenesis, and that this effect is mediated by YAP's co-activation of TEAD-mediated CTGF transcription., (Copyright © 2013 Elsevier Inc. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
48. Dectin-2-dependent NKT cell activation and serotype-specific antibody production in mice immunized with pneumococcal polysaccharide vaccine.
- Author
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Miyasaka T, Akahori Y, Toyama M, Miyamura N, Ishii K, Saijo S, Iwakura Y, Kinjo Y, Miyazaki Y, Oishi K, and Kawakami K
- Subjects
- Animals, Antibodies, Bacterial immunology, Antibody Specificity, Bone Marrow Cells cytology, Dendritic Cells cytology, Dendritic Cells immunology, Female, Gene Knockout Techniques, Interferon-gamma biosynthesis, Interleukin-12 Subunit p40 biosynthesis, Lectins, C-Type deficiency, Lectins, C-Type genetics, Male, Mice, Natural Killer T-Cells metabolism, Species Specificity, Antibodies, Bacterial biosynthesis, Lectins, C-Type metabolism, Lymphocyte Activation immunology, Natural Killer T-Cells immunology, Pneumococcal Vaccines immunology, Polysaccharides, Bacterial immunology, Vaccination
- Abstract
Although thymus-independent type 2 antigens generally do not undergo Ig class switching from IgM to IgG, pneumococcal polysaccharide vaccine (PPV) induces the production of serotype-specific IgG. How this happens remains unclear, however. In the present study, PPV immunization induced production of IgG as well as IgM specific for a serotype 3-pneumococcal polysaccharide in the sera of wild-type (WT) mice, but this phenomenon was significantly reduced in Dectin-2 knockout (KO) mice. Immunization with PPV caused IL-12p40 production in WT mice, but this response was significantly reduced in Dectin-2KO mice. Likewise, immunization with PPV activated natural killer T (NKT) cells in WT mice but not in Dectin-2KO mice. Furthermore, administration of α-galactosylceramide, recombinant (r)IL-12 or rIFN-γ improved the reduced IgG levels in Dectin-2KO mice, and treatment with neutralizing anti-IFN-γ mAb resulted in the reduction of IgG synthesis in PPV-immunized WT mice. Transfer of spleen cells from PPV-immunized WT mice conferred protection against pneumococcal infection on recipient mice, whereas this effect was cancelled when the transferred spleen cells were harvested from PPV-immunized Dectin-2KO mice. These results suggest that the detection of PPV antigens via Dectin-2 triggers IL-12 production, which induces IFN-γ synthesis by NKT cells and subsequently the production of serotype-specific IgG.
- Published
- 2013
- Full Text
- View/download PDF
49. Manganese(II) semiquinonato and manganese(III) catecholato complexes with tridentate ligand: modeling the substrate-binding state of manganese-dependent catechol dioxygenase and reactivity with molecular oxygen.
- Author
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Komatsuzaki H, Shiota A, Hazawa S, Itoh M, Miyamura N, Miki N, Takano Y, Nakazawa J, Inagaki A, Akita M, and Hikichi S
- Subjects
- Binding Sites, Catalysis, Coordination Complexes chemical synthesis, Ligands, Molecular Structure, Catechols chemistry, Coordination Complexes chemistry, Dioxygenases chemistry, Manganese chemistry, Models, Molecular, Oxygen chemistry
- Abstract
Catecholate catwalk: Monomeric manganese(III) catecholato and manganese(II) semiquinonato complexes as the substrate-binding model of catechol dioxygenase have been synthesized and structurally characterized. The semiquinonato complex reacted with molecular oxygen to give ring-cleaved products and benzoquinone in the catalytic condition., (Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2013
- Full Text
- View/download PDF
50. A case of cortisol producing adrenal adenoma associated with a latent aldosteronoma: usefulness of the ACTH loading test for the detection of covert aldosteronism in overt Cushing syndrome.
- Author
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Kukidome D, Miyamura N, Sakakida K, Shimoda S, Shigematu Y, Nishi K, Yamashita Y, Eto M, Sasano H, and Araki E
- Subjects
- Adrenal Gland Neoplasms complications, Adrenalectomy, Adrenocortical Adenoma complications, Adult, Female, Humans, Hyperaldosteronism diagnosis, Tomography, X-Ray Computed, Adrenal Gland Neoplasms diagnosis, Adrenocortical Adenoma diagnosis, Adrenocorticotropic Hormone, Aldosterone blood, Cushing Syndrome complications, Hydrocortisone blood, Hyperaldosteronism etiology
- Abstract
A 36-year-old woman with Cushing syndrome was evaluated for coexisting hyperaldosteronism, which was suggested by an abnormal response of the aldosterone-to-cortisol ratio in peripheral blood to the ACTH-administration despite a low basal aldosterone-to-renin ratio. Computed tomography revealed two independent tumors in the left adrenal gland, and adrenal venous sampling indicated hyperaldosteronism in addition to hypercortisolism in the same side. Postsurgical study including immunohistochemical analysis of steroidogenic enzymes suggested one adenoma to be cortisol-producing and the other, aldosterone-producing. The comorbidity of these different hormone-producing adenomas is not rare and careful pre-surgical evaluation is necessary to avoid post-surgical exacerbation of latent hyperaldosteronism.
- Published
- 2012
- Full Text
- View/download PDF
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