Search

This document provides guidance on best practice for the use of Diffusive Gradient in Thin films (DGT) passive samplers devices in sampling of transitional and coastal waters for water quality monitoring. The methodology1 to be addressed in this guide was developed by the consortium of the European Union's Interreg MONITOOL Project in order to ensure comparability and reproducibility of the data obtained from each project Partner in different regions. The guide provides practical and detailed information on all the aspects to be considered before the deployment of these devices and the essential steps for their deployment, retrieval and subsequent sample processing for the analysis of trace metals. Although it is not aimed as a standard protocol, these guidelines address the need for a common approach and the intention to promote best practice. [ABSTRACT FROM AUTHOR]

There are now more Particle-in-Cell (PIC) codes than ever before that researchers use to simulate intense laser–plasma interactions. To date, there have been relatively few direct comparisons of these codes in the literature, especially for relativistic intensity lasers interacting with thin overdense targets. To address this, we perform a code comparison of three PIC codes: EPOCH, LSP, and WarpX for the problem of laser-driven ion acceleration in a 2D(3v) geometry for a 1020 W cm−2 intensity laser. We examine the plasma density, ion energy spectra, and laser–plasma coupling of the three codes and find strong agreement. We also run the same simulation 20 times with different random seeds to explore statistical fluctuations of the outputs. We then compare the execution times and memory usage of the codes (without "tuning" to improve performance) using between 1 and 48 processors on one node. We provide input files to encourage larger and more frequent code comparisons in this field. [ABSTRACT FROM AUTHOR]

Passive sampling (PS) is a very useful approach for the monitoring of emerging contaminants in environmental matrices, showing greater sensitivity than can be achieved by current best practice -- grab sampling -- and is applicable to a wide variety of compounds. An EU Directive (2013/39/EC) has added substances to the existing Water Framework Directive (WFD) Priority Substance list. Investigation into PS in the monitoring of these compounds is necessary to show the potential of this technique in supporting monitoring requirements under the WFD. A catchment-based approach evaluated the occurrence of these compounds in Irish surface waters. This work deals with the challenges associated with the use of PS in a legislative context, and for routine monitoring of emerging contaminants. Looking at a number of sites across Ireland, upstream and downstream of wastewater treatment plants, the focus was on polar analytes and polar PS (POCIS). With method limits of detection (LODs) of 0.001 mg L-1 pharmaceuticals and endocrine disrupting chemicals (EDCs) were found in water and passive samples alike, whereas the polar pesticides were not often detected or were below the annual average environmental quality standard levels. The results of this study show the potential for PS as a monitoring technique for emerging and watch-list chemicals. [ABSTRACT FROM AUTHOR]

Over-exploitation of top predators and fish stocks has altered ecosystems towards less productive systems with fewer trophic levels. In the Celtic Sea ( CS), discards and bycatch levels have prompted concern about some fisheries, while fin and humpback whales are recovering from centuries of over-exploitation. A lack of empirical evidence on the preferred diet of some predators such as whales in the CS has hindered the implementation of effective conservation measures using an ecosystem-based approach to fisheries management. Using a Bayesian framework ( SIAR), stable carbon ( δ13C) and nitrogen ( δ15N) isotope mixing models were used to assign proportionate diet solutions to fin and humpback whales (skin biopsies) and putative prey items: herring ( Clupea harengus), sprat ( Sprattus sprattus), and krill ( Meganyctiphanes norvegica and Nyctiphanes couchii) in the CS. Krill was the single most important prey item in the diet of fin whales, but one of the least important for humpback whales (albeit based on a small sample of humpback whale samples). Age 0 sprat and herring comprised a large proportion of the diet of both species, followed by older sprat (age 1-2) and older herring (age 2-4). An ecosystem based approach to fisheries management will be required in the CS if we seek effective conservation of both fin and humpback whales, and sustainable fisheries. [ABSTRACT FROM AUTHOR]

The article examines the lipid content of blubber biopsies in fin whales. It notes the high variability of lipid content of biopsies from the same individual. The study suggests that the content does not represent the whales' tissue. It explains that lipid loss will continue as soak time function as reflected in a weak and nonsignificant negative relationship between the lipid content and the seawater soak time.

RATIONALE Trace levels of natural and synthetic steroid estrogens estrone (E1), 17β-estradiol (E2) and 17α-ethynyl estradiol (EE2) have been demonstrated to exert adverse effects in exposed organisms. E2 and EE2 have been proposed for inclusion in the Water Framework Directive (WFD) list of priority pollutants; however, the detection and accurate quantification of these compounds provide significant challenges, due to the low detection limits required. METHODS A sensitive method combining ultrasonication, solid-phase extraction (SPE) and liquid chromatography/tandem mass spectrometry, with electrospray ionisation in negative mode (LC/ESI-MS/MS), capable of determining E1, E2 and EE2 at concentrations between 0.07 and 60 ng/L for seawater and between 0.4 and 200 ng/g wet weight in Mytilus spp. is reported. Recoveries at the limit of quantification (LOQ) ranged from 95 to 102% and 88 to 100% for water and tissue, respectively. Salinity (12 to 35‰) and typical marine particulate matter loadings (between 10 and 100 mg/L) were not found to affect analyte recoveries. RESULTS The first detection of E1 by LC/MS/MS in Irish marine waters (Dublin Bay, at 0.76 ng/L) is reported. Steroids were not detected in Galway Bay, or in any mussel samples from Dublin, Galway and Clare. The level of E2 detected in the dissolved water phase was below the proposed WFD Environmental Quality Standard (EQS) in other surface waters. CONCLUSIONS The proposed method is suitable for the detection of E1, E2 and EE2 at biologically relevant concentrations and, due to the specificity offered, is not subject to potential interferences from endogenous E1 and E2 which often complicate the interpretation of estrogenic biomarker assays. Copyright © 2013 John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]

RATIONALE Stable isotope values ( δ13C and δ15N) of darted skin and blubber biopsies can shed light on habitat use and diet of cetaceans, which are otherwise difficult to study. Non-dietary factors affect isotopic variability, chiefly the depletion of 13C due to the presence of 12C-rich lipids. The efficacy of post hoc lipid-correction models (normalization) must be tested. METHODS For tissues with high natural lipid content (e.g., whale skin and blubber), chemical lipid extraction or normalization is necessary. C:N ratios, δ13C values and δ15N values were determined for duplicate control and lipid-extracted skin and blubber of fin ( Balaenoptera physalus), humpback ( Megaptera novaeangliae) and minke whales ( B. acutorostrata) by continuous-flow elemental analysis isotope ratio mass spectrometry (CF-EA-IRMS). Six different normalization models were tested to correct δ13C values for the presence of lipids. RESULTS Following lipid extraction, significant increases in δ13C values were observed for both tissues in the three species. Significant increases were also found for δ15N values in minke whale skin and fin whale blubber. In fin whale skin, the δ15N values decreased, with no change observed in humpback whale skin. Non-linear models generally out-performed linear models and the suitability of models varied by species and tissue, indicating the need for high model specificity, even among these closely related taxa. CONCLUSIONS Given the poor predictive power of the models to estimate lipid-free δ13C values, and the unpredictable changes in δ15N values due to lipid-extraction, we recommend against arithmetical normalization in accounting for lipid effects on δ13C values for balaenopterid skin or blubber samples. Rather, we recommend that duplicate analysis of lipid-extracted ( δ13C values) and non-treated tissues ( δ15N values) be used. Copyright © 2012 John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]

A revised risk assessment for toxaphene was developed, based on the assumption that fish consumers are only exposed to toxaphene residues that differ substantially from technical toxaphene due to environmental degradation and metabolism. In vitro studies confirmed that both technical toxaphene and degraded toxaphene inhibit gap junctional intercellular communication that correlates with the mechanistic potential to cause tumor promotion. In vivo rat studies established the NOAEL for degraded and technical toxaphene at the highest dose tested in the bioassay. Toxaphene residue intakes from European fishery products were estimated and compared to the provisional tolerable daily intakes (TDIs) from various regulatory agencies including Canada, the United States, and Germany. The estimated intake was also compared to a new calculated provisional MATT pTDI. The MATT pTDI is based on new toxicological information (in vivo rat studies) developed on a model for environmental toxaphene residues rather than technical toxaphene. A MATT pTDI (1.08 mg total toxaphene for a person of 60 kg) for tumor promotion potency was adopted for use in Europe and is referred to here as the MATT pTDI. These new data result in a better estimate of safety and a higher TDI than previously used. Based on realistic fish consumption data and recent baseline concentration data of toxaphene in European fishery products, the toxaphene intake for the consumers of Germany, Ireland, Norway, and the Netherlands was estimated. For an average adult fish consumer, the average daily intake of toxaphene was estimated to be 1.2, 0.4, 0.5, and 0.2 µg for the consumers of Norway, Germany, Ireland, and the Netherlands, respectively. The toxaphene intake of these average fish consumers was far below the MATT pTDI of 1.08 mg/60 kg bw. In conclusion, based on the most relevant toxicological studies and the most realistic estimates of fish consumption and recent concentrations of toxaphene in European fishery products, adverse health effects are unlikely for the average European consumer of fishery products. In no case is the MATT pTDI exceeded. Integr Environ Assess Manag 2012; 8: 523-529. © SETAC [ABSTRACT FROM AUTHOR]

Consensus is still lacking on how best to capture the shape of a residual limb. Computer-aided design systems have not proven more accurate, repeatable, or reliable than traditional plaster of paris methods. Research is limited in design, relates to clinical trials, and is based on opinions and clinical experience. Many outcome measurements are based on qualitative estimations of prosthetic fit or patient feedback rather than quantitative measurements. Research must identify the most accurate, repeatable, and reliable methods for residual-limb shape capture under conditions most likely to enhance socket fit. Measurement is difficult because a reference grid is required for identifying the residual limb's axis for ensuring direct comparison. This article describes a manikin production method for testing the shape capture of the residual limb. Diameters and volume were measured at specific levels with a programmable computer numerical control milling machine and a displacement tool, with a combined accuracy of 5 micrometers. [ABSTRACT FROM AUTHOR]

The present study reports an in vitro screening method for contaminants in sediment samples utilizing an RTG-2 cell line. This technique integrates cytotoxicity testing with analytical chemistry with the aim of achieving a toxicity evaluation of the sediment sample. The toxic effect of individual organotin (OT) compounds and their presence in the sediment sample is the focus of the present study; however, other contaminants are also discussed. The following OT compounds: tributyltin (TBT), dibutyltin (DBT), monobutyltin (MBT), triphenyltin (TPT), diphenyltin (DPT), and a sediment solvent extract are exposed to the RTG-2 fish cell line. Both the alamar blue (AB) and neutral red (NR) assays are used to assess cytotoxicity after 24-h and 96-h exposure. Methodology for preparation of a sediment solvent extract suitable for biological testing and analytical determination is also described. With the RTG-2 cells, the AB and NR assays had comparable sensitivity for each individual OT compound exposure after 24 h, with TPT being the most toxic compound tested. The individual OT compound concentrations required to induce a 50% toxic effect on the cells (369 ng ml TBT, 1,905 ng ml DBT) did not equate to the concentrations of these contaminants present in the sediment extract that induced a 50% effect on the cells (294 ng ml TBT, 109 ng ml DBT). The solvent extract therefore exhibited a greater toxicity, and this suggests that the toxic effects observed were not due to OT compounds alone. The presence of other contaminants in the solvent extract is confirmed with chemical analysis, warranting further toxicity testing of contaminant mixtures and exposure to the cell line to further elucidate a complete toxicity evaluation. Environ. Toxicol. Chem. 2011;30:154-161. © 2010 SETAC [ABSTRACT FROM AUTHOR]

Abstract: The European eel (Anguilla anguilla) is a relatively high lipid, long lived species capable of living in a variety of brackish, fresh and marine habitats. As such, eels can accumulate organic pollutants and have been incorporated into environmental monitoring programs as a suitable “bioindicator” species for the determination of the levels of organic contaminants within different water bodies. The global eel stock is now in decline and while the cause of the collapse remains unidentified, it is likely to include a combination of anthropogenic mortality in addition to environmental degradation. This study provides valuable data on a range of contaminants (PCDD/Fs, PCBs, OCPs, PBDEs, HBCD, TBBPA and PBBs) and extractable lipid levels in eel muscle tissue collected from five Irish catchments. Extractable lipid levels were lower in the yellow eels compared to those in the silver eels. These levels were similar to those reported elsewhere and it has been posited that a decline in the lipid content in yellow eels may have consequences for the future viability of the stock. With the exception of higher substituted dioxins (especially OCDD), in three samples collected from one catchment (Burrishoole) in the West of Ireland, POP levels in general were determined to be low in eels from Irish waters compared to those in other countries. [Copyright &y& Elsevier]

Abstract: This paper describes the ecotoxicological evaluation of five organic contaminants frequently detected in marine sediments (tributyltin, triphenyltin, benzo[a]pyrene, fluoranthene, and PCB 153) using three marine species (Vibrio fischeri, Tetraselmis suecica, and Tisbe battagliai). The sensitivity of each species varied for all compounds. The triorganotins were consistently the most toxic to all species. The applicability of each test system to assess the acute toxicity of environmental contaminants and their use in Toxicity Identification Evaluation (TIE) is discussed. Suitability of the Microtox and T. battagliai tests for employment in TIE studies were further assessed through spiking experiments with tributyltin. Results demonstrated that the most effective treatment to remove organotin toxicity from the sample was the C18 resin. The results of this study have important implications for risk assessment in estuarine and coastal waters in Ireland, where, at present the monitoring of sediment and water quality is predominantly reliant on chemical analysis alone. [Copyright &y& Elsevier]

Seabird eggs are considered a favourable matrix for monitoring marine pollutants and are widely used as higher trophic level indicators. Persistent organic pollutants such as polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs) and other organochlorine compounds (OCs) as well as metals have been shown to have deleterious impacts on seabirds. The Northern Gannet Morus bassanus is an avian sentinel; the largest breeding seabird in Ireland and an obligate piscivore. Gannet eggs were collected from two island colonies off the east coast of Ireland in locations with divergent history of industrialisation. Contaminant levels were measured and differences in concentrations between colonies compared. Stable isotope ratios of carbon (δ 13 C) and nitrogen (δ 15 N) were measured in each egg to understand the influence of diet and trophic position on contaminant levels detected. Significantly higher levels of Σ 14PCBs, Σ 7PBDEs and total mercury were detected in Gannet eggs from Lambay Island near Dublin (Ireland's industrialised capital city) compared to Great Saltee Island. No differences were observed in levels of other OCs (HCB, Σ HCH, Σ CHL, Σ DDT) between the two colonies. Though Gannets travel significant distances when foraging for food, tracking studies have demonstrated that birds from proximal breeding colonies maintain exclusive feeding areas. Stable isotope ratio analysis in this study demonstrated that Gannets at both locations occupy similar dietary niches, indicating that dietary differences may not be the driver of differing contaminant levels between colonies. Levels of persistent pollutants in the Gannet eggs fall below most existing thresholds for adverse effects and are within internationally reported values. Recent population growth and range expansion of Gannets in Ireland suggest that persistent pollutants are not having an immediate impact on the Gannet population. This study will inform potential monitoring programmes that can help Ireland achieve good environmental status under the European Union's Marine Strategy Framework Directive. Image 1 • Higher levels of pollutants in eggs from Dublin colony (near capital city). • Gannets from both sites have a similar dietary niche. • Levels of pollutants below thresholds for adverse effects with exception of mercury. • Levels of pollutants in the Gannet are within internationally reported values. • Pollutants are not having an immediate impact on Gannet population in Ireland. Differences in contaminant burden between two colonies is most likely a result of Gannets from different sites having mutually exclusive feeding areas. Levels fall below most existing thresholds for adverse effects in other species, with the exception of mercury. [ABSTRACT FROM AUTHOR]

Bio-accumulation of persistent organic pollutants including polychlorinated biphenyls (PCBs), brominated flame retardants and organochlorine pesticides continue to be of major concern for marine apex predators such as killer whales. The concentrations of 16 polychlorinated biphenyls, 7 poly-brominated diphenyl ethers (PBDEs), 1 poly-brominated biphenyl (PBB) and a range of 19 organochlorine compounds (OCs) was investigated in blubber samples from a mother-foetus pair, an adult female and an adult male killer whale stranded in Ireland between 2010 and 2017. Concentrations ranged from 1.5 mg/kg to 49.3 mg/kg lipid weight and 0.04–1.2 mg/kg lipid weight for Σ16PCBs and Σ7PBDEs respectively. Concentrations of organochlorine compounds were also investigated in the male killer whale; a Σ19OC concentration of 49.4 mg/kg lipid weight was recorded. This study shows high levels of persistent organic pollutants occur in this species of whales stranded in Ireland. • Contaminant data for a sparsely studied region has been expanded. • Provides information regarding the rare stranding of mother-foetus killer whale pair. • Persistent organic pollutant threshold exceeded in Irish killer whale stranding. [ABSTRACT FROM AUTHOR]