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Side-striped Jackal, Lupulella adusta (Sundevall, 1847), occurs in a vast area within sub-Saharan Africa. In South Africa, the current geographical distribution is limited to eastern coastal regions. Recent sightings from north-central areas of the country suggest a wider geographical distribution. Here we report on 5,130 confirmed, repeated detections of Side-striped Jackal. Of these, 3,625 captures were from 471 new locations not previously recorded in the scientific literature, thereby expanding their current geographical distribution. These new records were captured in 33 vegetation types, including the forest and grassland biomes where they are not commonly detected.

Abstract Carnivore intraguild dynamics depend on a complex interplay of environmental affinities and interspecific interactions. Context‐dependency is commonly expected with varying suites of interacting species and environmental conditions but seldom empirically described. In South Africa, decentralized approaches to conservation and the resulting multi‐tenure conservation landscapes have markedly altered the environmental stage that shapes the structure of local carnivore assemblages. We explored assemblage‐wide patterns of carnivore spatial (residual occupancy probability) and temporal (diel activity overlap) co‐occurrence across three adjacent wildlife‐oriented management contexts—a provincial protected area, a private ecotourism reserve, and commercial game ranches. We found that carnivores were generally distributed independently across space, but existing spatial dependencies were context‐specific. Spatial overlap was most common in the protected area, where species occur at higher relative abundances, and in game ranches, where predator persecution presumably narrows the scope for spatial asymmetries. In the private reserve, spatial co‐occurrence patterns were more heterogeneous but did not follow a dominance hierarchy associated with higher apex predator densities. Pair‐specific variability suggests that subordinate carnivores may alternate between pre‐emptive behavioral strategies and fine‐scale co‐occurrence with dominant competitors. Consistency in species‐pairs diel activity asynchrony suggested that temporal overlap patterns in our study areas mostly depend on species' endogenous clock rather than the local context. Collectively, our research highlights the complexity and context‐dependency of guild‐level implications of current management and conservation paradigms; specifically, the unheeded potential for interventions to influence the local network of carnivore interactions with unknown population‐level and cascading effects.

The reservoir host of Mokola virus (MOKV), a rabies-related lyssavirus species endemic to Africa, remains unknown. Only sporadic cases of MOKV have been reported since its first discovery in the late 1960s, which subsequently gave rise to various reservoir host hypotheses. One particular hypothesis focusing on non-volant small mammals (e.g. shrews, sengis and rodents) is buttressed by previous MOKV isolations from shrews (Crocidura sp.) and a single rodent (Lophuromys sikapusi). Although these cases were only once-off detections, it provided evidence of the first known lyssavirus species has an association with non-volant small mammals. To investigate further, retrospective surveillance was conducted in 575 small mammals collected from South Africa. Nucleic acid surveillance using a pan-lyssavirus quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR) assay of 329 brain samples did not detect any lyssavirus ribonucleic acid (RNA). Serological surveillance using a micro-neutralisation test of 246 serum samples identified 36 serum samples that were positive for the presence of MOKV neutralising antibodies (VNAs). These serum samples were all collected from Gerbilliscus leucogaster (Bushveld gerbils) rodents from Meletse in Limpopo province (South Africa). Mokola virus infections in Limpopo province have never been reported before, and the high MOKV seropositivity of 87.80% in these gerbils may indicate a potential rodent reservoir.

The current geographical distribution of the Egyptian Mongoose or Large Grey Mongoose, Herpestes ichneumon (Linnaeus, 1758), in South Africa is limited to the south-eastern coastal and eastern sections of the country. One recent sighting in the central part of the country suggested a wider geographical distribution. In this study, we report on confirmed sightings of the Egyptian Mongoose on consecutive years in the central part (at Sasol’s Synfuels Plant in Secunda) of the country. Our sightings thus expand the distribution of the Egyptian Mongoose in South Africa to include some sections of the central to eastern part of the country.

This dataset includes data derived from camera trap surveys and questionnaire surveys relating to small carnivores in agro-ecosystems in the Vhembe Biosphere Reserve, South Africa. The data were collected as part of the study “Predation by small mammalian carnivores in rural agro-ecosystems: An undervalued ecosystem service?” (Williams et al., 2017a) [1]. Camera trap locations were stratified by land use: settlement, crops, and grazing areas. The camera trap data provide an insight into the ecology of the nine species of small carnivores that were recorded: striped polecat (Ictonyx striatus), honey badger (Mellivora capensis), large-spotted genet (Genetta maculata), African civet (Civettictis civetta), slender mongoose (Galerella sanguinea), Meller's mongoose (Rhynchogale melleri), Selous' mongoose (Paracynictis selousi), white tailed mongoose (Ichneumia albicauda), and dwarf mongoose (Helogale parvula). We also recorded domesticated animals such as domestic cats (Felis catus), domestic dogs (Canis lupus familiaris), and cattle (Bos taurus) on the camera traps. The questionnaire data are comprised of responses of stakeholders to questions regarding the impacts of these species on rural farming communities. In the accompanying data repository hosted on Figshare (doi 10.6084/m9.figshare.4750807, (Williams et al., 2017b) [2]) we provide raw data, along with processed data and R code used to analyse these data to determine the impact of land use and domestic animals on the species richness and occupancy of small carnivores in rural agro-ecosystems (Williams et al., 2017a) [1].

South Africa’s decentralized approach to conservation entails that wildlife outside formally protected areas inhabit complex multi-use landscapes, where private wildlife business (ecotourism and/or hunting) co-exist in a human-dominated landscape matrix. Under decentralized conservation, wildlife is perceived to benefit from increased amount of available habitat, however it is crucial to understand how distinct management priorities and associated landscape modifications impact noncharismatic taxa, such as small mammals. We conducted extensive ink-tracking-tunnel surveys to estimate heterogeneity in rodent distribution and investigate the effect of different environmental factors on abundance patterns of two size-based rodent groups (small- and medium-sized species), across three adjacent management contexts in NE KwaZulu-Natal, South Africa: a private ecotourism game reserve, mixed farms and traditional communal areas (consisting of small clusters of houses interspersed with grazing areas and seminatural vegetation). Our hypotheses were formulated regarding the (1) area typology, (2) vegetation structure, (3) ungulate pressure and (4) human disturbance. Using a boosted-regression-tree approach, we found considerable differences between rodent groups’ abundance and distribution, and the underlying environmental factors. The mean relative abundance of medium-sized species did not differ across the three management contexts, but small species mean relative abundance was higher in the game reserves, confirming an influence of the area typology on their abundance. Variation in rodent relative abundance was negatively correlated with human disturbance and ungulate presence. Rodent abundance seems to be influenced by environmental gradients that are directly linked to varying management priorities across land uses, meaning that these communities might not benefit uniformly by the increased amount of habitat promoted by the commercial wildlife industry.

As the global road network expands, roads pose an emerging threat to wildlife populations. One way in which roads can affect wildlife is wildlife-vehicle collisions, which can be a significant cause of mortality through roadkill. In order to successfully mitigate these problems, it is vital to understand the factors that can explain the distribution of roadkill. Collecting the data required to enable this can be expensive and time consuming, but there is significant potential in partnering with organisations that conduct existing road patrols to obtain the necessary data. We assessed the feasibility of using roadkill data collected daily between 2014 and 2017 by road patrol staff from a private road agency on a 410 km length of the N3 road in South Africa. We modelled the relationship between a set of environmental and anthropogenic variables on the number of roadkill carcasses, using serval (Leptailurus serval) as a model species. We recorded 5.24 serval roadkill carcasses/100 km/year. The number of carcasses was related to season, the amount of wetland, and NDVI, but was not related to any of the anthropogenic variables we included. This suggests that roadkill patterns may differ greatly depending on the ecology of species of interest, but targeting mitigation measures where roads pass through wetlands may help to reduce serval roadkill. Partnering with road agencies for data collection offers powerful opportunities to identify factors related to roadkill distribution and reduce the threats posed by roads to wildlife.

La teoría depredador-presa sugiere que los depredadores generalistas están vinculados a la estabilidad demográfica de las presas, mientras que los especialistas son desestabilizadores. En este artículo hemos hecho una revisión general de las consecuencias demográficas de diferentes estrategias de depredación y hemos intentado testar la hipótesis de que la caza de subsistencia se produce de forma oportunista, la caza de persecución sería la realizada por depredadores especializados y la caza recreativa por depredadores generalistas. Desde esta hipótesis, la caza de persecución tendría efectos desestabilizadores, mientras que los efectos de la caza de subsistencia y recreativa serían neutrales o estabilizadores. Hemos encontrado poco apoyo empírico para esta hipótesis, pero también es cierto que contamos con escasa información de campo. Los cazadores de recreo principalmente cazan de forma oportunista y la caza de persecución muestra una respuesta funcional de tipo III, es decir, disminuye la intensidad de presas cuando lo hace la abundancia de presas y aumenta dicha intensidad ante cierto nivel de abundancia de presas. Sugerimos que los cazadores de recreo limitan los efectos desestabilizadores sobre las poblaciones de caza y que la caza no es un método eficaz de eliminación completa de especies invasoras. Instamos a la realización de nuevos estudios que cuantifiquen las respuestas de los cazadores a la abundancia de presas, en particular estudios que evalúen las respuestas de los cazadores de subsistencia y la persecución ilegal.

Rodent pests are especially problematic in terms of agriculture and public health since they can inflict considerable economic damage associated with their abundance, diversity, generalist feeding habits and high reproductive rates. To quantify rodent pest impacts and identify trends in rodent pest research impacting on small-holder agriculture in the Afro-Malagasy region we did a systematic review of research outputs from 1910 to 2015, by developing an a priori defined set of criteria to allow for replication of the review process. We followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines. We reviewed 162 publications, and while rodent pest research was spatially distributed across Africa (32 countries, including Madagascar), there was a disparity in number of studies per country with research biased towards four countries (Tanzania [25%], Nigeria [9%], Ethiopia [9%], Kenya [8%]) accounting for 51% of all rodent pest research in the Afro-Malagasy region. There was a disparity in the research themes addressed by Tanzanian publications compared to publications from the rest of the Afro-Malagasy region where research in Tanzania had a much more applied focus (50%) compared to a more basic research approach (92%) in the rest of the Afro-Malagasy region. We found that pest rodents have a significant negative effect on the Afro-Malagasy small-holder farming communities. Crop losses varied between cropping stages, storage and crops and the highest losses occurred during early cropping stages (46% median loss during seedling stage) and the mature stage (15% median loss). There was a scarcity of studies investigating the effectiveness of various management actions on rodent pest damage and population abundance. Our analysis highlights that there are inadequate empirical studies focused on developing sustainable control methods for rodent pests and rodent pests in the Africa-Malagasy context is generally ignored as a research topic.

[This corrects the article DOI: 10.1371/journal.pone.0174554.].

Predation strategies in response to altering prey abundances can dramatically influence the demographic effects of predation. Despite this, predation strategies of humans are rarely incorporated into quantitative assessments of the demographic impacts of humans killing carnivores. This scarcity largely seems to be caused by a lack of data. In this study, we contrasted predation strategies exhibited by people involved in retaliatory killing and recreational sport hunting of leopards (Panthera pardus) in the Waterberg District Municipality, South Africa. We predicted a specialist predation strategy exemplified by a type II functional response for retaliatory killing, and a generalist strategy exemplified by a type III functional response for recreational sport hunting. We could not distinguish between a type I, a type II, or a type III functional response for retaliatory killing, but the most parsimonious model for recreational sport hunting corresponded to a type I functional response. Kill rates were consistently higher for retaliatory killing than for recreational sport hunting. Our results indicate that retaliatory killing of leopards may have severe demographic consequences for leopard populations, whereas the demographic consequences of recreational sport hunting likely are less dramatic.

Specialist carnivores are often among the first species disappearing from transformed, human-dominated landscapes. However, some carnivore species can exploit abundant food sources in human-dominated landscapes. In this study, we investigated the diet of a specialist carnivore, the serval (Leptailurus serval), inhabiting artificial and natural landscapes surrounding a petrochemical plant in the Highveld of Mpumalanga, South Africa. From 2013 to 2018, for each year, we collected and analysed a total of 264 scat samples. We found that rodent species dominated the serval diet, while other prey items like birds, insects, and unidentified prey contributed little to the diet. In terms of biomass consumed, Otomys sp (56.94 %), Mastomys sp (19.12 %), and Rhabdomys sp (8.68 %) were the most important rodent prey. We further found that biomass consumed is only affected by species, not season or species–season interactions. Our results concur with previous studies that serval is primarily a rodent specialist and that specialisation holds even in human-altered landscapes. [ABSTRACT FROM AUTHOR]

The size of the home range of a mammal is affected by numerous factors. However, in the normally solitary, but polygynous, Leopard (Panthera pardus), home range size and maintenance is complicated by their transitory social grouping behavior, which is dependent on life history stage and/or reproductive status. In addition, the necessity to avoid competition with conspecifics and other large predators (including humans) also impacts upon home range size. We used movement data from 31 sites across Africa, comprising 147 individuals (67 males and 80 females) to estimate the home range sizes of leopards. We found that leopards with larger home ranges, and in areas with more vegetation, spent longer being active and generally traveled faster, and in straighter lines, than leopards with smaller home ranges. We suggest that a combination of bottom-up (i.e. preferred prey availability), top-down (i.e. competition with conspecifics), and reproductive (i.e. access to mates) factors likely drive the variability in Leopard home range sizes across Africa. However, the maintenance of a large home range is energetically expensive for leopards, likely resulting in a complex evolutionary trade-off between the satisfaction of basic requirements and preventing potentially dangerous encounters with conspecifics, other predators, and people. [ABSTRACT FROM AUTHOR]

Spatial patterns of and competition for resources by territorial carnivores are typically explained by two hypotheses: 1) the territorial defence hypothesis and 2) the searching efficiency hypothesis.According to the territorial defence hypothesis, when food resources are abundant, carnivore densities will be high and home ranges small. In addition, carnivores can maximise their necessary energy intake with minimal territorial defence. At medium resource levels, larger ranges will be needed, and it will become more economically beneficial to defend resources against a lower density of competitors. At low resource levels, carnivore densities will be low and home ranges large, but resources will be too scarce to make it beneficial to defend such large territories. Thus, home range overlap will be minimal at intermediate carnivore densities.According to the searching efficiency hypothesis, there is a cost to knowing a home range. Larger areas are harder to learn and easier to forget, so carnivores constantly need to keep their cognitive map updated by regularly revisiting parts of their home ranges. Consequently, when resources are scarce, carnivores require larger home ranges to acquire sufficient food. These larger home ranges lead to more overlap among individuals' ranges, so that overlap in home ranges is largest when food availability is the lowest. Since conspecific density is low when food availability is low, this hypothesis predicts that overlap is largest when densities are the lowest.We measured home range overlap and used a novel method to compare intraspecific home range overlaps for lions Panthera leo (n = 149) and leopards Panthera pardus (n = 111) in Africa. We estimated home range sizes from telemetry location data and gathered carnivore density data from the literature.Our results did not support the territorial defence hypothesis for either species. Lion prides increased their home range overlap at conspecific lower densities whereas leopards did not. Lion pride changes in overlap were primarily due to increases in group size at lower densities. By contrast, the unique dispersal strategies of leopards led to reduced overlap at lower densities. However, when human‐caused mortality was higher, leopards increased their home range overlap. Although lions and leopards are territorial, their territorial behaviour was less important than the acquisition of food in determining their space use. Such information is crucial for the future conservation of these two iconic African carnivores. [ABSTRACT FROM AUTHOR]

Populations of carnivore species outside protected areas may be of considerable importance for conservation, as many protected areas do not provide sufficient space for viable populations. Data on carnivore population sizes and trends are often biased towards protected areas, and few studies have examined the role of unprotected areas for carnivore conservation. We used camera-trapping data and spatial capture–recapture models to estimate population densities for four sympatric carnivores: the African leopard Panthera pardus, spotted hyaena Crocuta crocuta, brown hyaena Parahyaena brunnea and African civet Civettictis civetta in Platjan, a predominantly agricultural, mixed land-use system, South Africa. Mean densities per 100 km2 for the leopard were 2.20 (95% CI 1.32–3.68) and 2.18 (95% CI 1.32–3.61) for left and right flank data, respectively; spotted hyaena, 0.22 (95% CI 0.06–0.81); brown hyaena, 0.74 (95% CI 0.30–1.88); and African civet 3.60 (95% CI 2.34–5.57; left flanks) and 3.71 (95% CI 2.41–5.72; right flanks). Our results indicate that although densities are lower than those reported for protected areas, humans and predators coexist in this unprotected agricultural matrix. We suggest that increased conservation effort should be focused in such areas, to mitigate human–carnivore conflicts. Our study improves the knowledge available for carnivore populations on privately owned, unprotected land, and may benefit conservation planning. [ABSTRACT FROM AUTHOR]

Carnivore intraguild dynamics depend on a complex interplay of environmental affinities and interspecific interactions. Context‐dependency is commonly expected with varying suites of interacting species and environmental conditions but seldom empirically described. In South Africa, decentralized approaches to conservation and the resulting multi‐tenure conservation landscapes have markedly altered the environmental stage that shapes the structure of local carnivore assemblages. We explored assemblage‐wide patterns of carnivore spatial (residual occupancy probability) and temporal (diel activity overlap) co‐occurrence across three adjacent wildlife‐oriented management contexts—a provincial protected area, a private ecotourism reserve, and commercial game ranches. We found that carnivores were generally distributed independently across space, but existing spatial dependencies were context‐specific. Spatial overlap was most common in the protected area, where species occur at higher relative abundances, and in game ranches, where predator persecution presumably narrows the scope for spatial asymmetries. In the private reserve, spatial co‐occurrence patterns were more heterogeneous but did not follow a dominance hierarchy associated with higher apex predator densities. Pair‐specific variability suggests that subordinate carnivores may alternate between pre‐emptive behavioral strategies and fine‐scale co‐occurrence with dominant competitors. Consistency in species‐pairs diel activity asynchrony suggested that temporal overlap patterns in our study areas mostly depend on species' endogenous clock rather than the local context. Collectively, our research highlights the complexity and context‐dependency of guild‐level implications of current management and conservation paradigms; specifically, the unheeded potential for interventions to influence the local network of carnivore interactions with unknown population‐level and cascading effects. [ABSTRACT FROM AUTHOR]

Theory on intraguild killing (IGK) is central to mammalian carnivore community ecology and top‐down ecosystem regulation. Yet, the cryptic nature of IGK hinders empirical evaluations. Using a novel data source – online photographs of interspecific aggression between African carnivores – we revisited existing predictions about the extent and drivers of IGK. Compared with seminal reviews, our constructed IGK network yielded 10 more species and nearly twice as many interactions. The extent of interactions increased 37% when considering intraguild aggression (direct attack) as a precursor of killing events. We show that IGK occurs over a wider range of body‐mass ratios than predicted by standing competition‐based views, with highly asymmetrical interactions being pervasive. Evidence that large species, particularly hypercarnivore felids, target sympatric carnivores with a wide range of body sizes suggests that current IGK theory is incomplete, underestimating alternative competition pathways and the role of predatory and incidental killing. Our findings reinforce the potential for IGK‐mediated cascades in species‐rich assemblages and community‐wide suppressive effects of large carnivores. [ABSTRACT FROM AUTHOR]

Fires are common in many ecosystems world‐wide, and are frequently used as a management tool. Although the responses of herbivores to fire have been well‐studied, the responses of carnivores to fire remain unclear. In particular, post‐fire habitat changes, and the associated changes in prey availability, might affect the coexistence or competition of carnivore species within the larger carnivore community, but few studies have focused on how fires influence multiple carnivore species simultaneously.Using South African carnivores as our focal community, we explored relative changes in carnivore intensity of use in post‐fire landscapes associated with hypothesized changes in prey availability and top‐down suppression.We monitored carnivore intensity of use in relation to prescribed burning using camera traps, with a Before‐After‐Control‐Impact study design. We analysed the camera trap data using community N‐mixture models to understand how individual species, as well as the carnivore guild as a whole, respond to burning.Changes in carnivore intensity of use in response to prescribed burns were not uniform; however, no species decreased the intensity of use of post‐fire landscapes. The apex predator, the lion Panthera leo, increased the use of prey‐rich burnt areas, but other large carnivore species exhibited neutral responses to fire despite the associated prey increase. Responses of medium‐ and small‐sized carnivores were species specific, and included both neutral and positive responses. Positive responses to fire by lions and herbivores were short‐lived, and did not persist a year after burning occurred.Synthesis and applications. Our results indicate that fire does not promote carnivore coexistence by creating conditions for all carnivores to increase the use of burned areas, but that it also likely does not result in spatial avoidance of subordinate predators. Instead, fires might cause a suppression of opportunities for subordinate large carnivores because they need to avoid the apex predator, rather than take advantage of short‐term increased hunting opportunities in recently burned areas. Our results highlight the complexity of understanding species‐specific and community‐level responses of carnivores to fire, and overlooked the ecological effects of its use as a management tool. [ABSTRACT FROM AUTHOR]

One of the key factors influencing the population dynamics of threatened species such as felids is disease, but long-term studies of the factors influencing seroprevalence of wild felids are extremely rare, hindering conservation efforts. We set out to determine seroprevalence of six viral diseases (feline panleukopenia virus, feline leukemia virus, feline coronavirus, feline calicivirus, feline herpes virus, and feline immunodeficiency virus) among a population of serval (Leptailurus serval) with an extremely high density in South Africa. We captured 55 individuals over four years and screened blood samples for antibodies to each virus. We found that seroprevalence were high (ranging from 30.0% positive for a single virus to 1.8% positive for up to five viruses) and that seroprevalence was influenced by season and sex, but not body condition. We suggest further monitoring of this population and recommend that long-term studies are conducted for serval and other felids to determine whether these trends are representative on a broader scale. [ABSTRACT FROM AUTHOR]

Conservation efforts in South Africa play out across multi‐use landscapes where formal protected areas coexist with private wildlife business (ecotourism and/or hunting) in a human‐dominated matrix. Despite the persistence of highly diverse carnivore guilds, management idiosyncrasies are often orientated towards charismatic large predators and assemblage‐level patterns remain largely unexplored.We conducted an extensive camera‐trap survey in a natural quasi‐experimental setting in KwaZulu‐Natal, South Africa. We sampled across a protection gradient characterized by a provincial protected area (highest and formal protection status), a private ecotourism reserve, game ranches and traditional communal areas (lowest protected status). We evaluated assemblage‐level and species‐specific responses of free‐ranging carnivores to the varying management contexts and associated environmental gradients.Despite similar assemblage composition between management contexts, site‐scale carnivore richness and occupancy rates were greater in the formal protected area than adjacent private reserve and game ranches. Carnivore occupancy was more similar between these private wildlife areas, although putative problem species were more common in the private reserve, and contrasted with depauperate assemblages in least protected communal lands. Variation in carnivore occupancy probabilities was largely driven by land use contexts, that is, the level and nature of protection, relative to underlying fine‐scale landscape attributes (e.g. distance to conservation fences) or apex predator populations.Synthesis and applications. Our findings provide convincing empirical support for the added value of multi‐tenure conservation estates augmenting and connecting South Africa's protected areas. However, our emphasis on free‐ranging carnivores exemplifies the importance of maintaining areas under long‐term formal protection and the risks with viewing lucrative wildlife business as a conservation panacea. We suggest that unmanaged carnivore species be the formal components of carnivore reintroduction and recovery programmes to better gauge the complementary conservation role of South Africa's private land. [ABSTRACT FROM AUTHOR]

Rodents generate negative consequences for smallholder farmers in Africa that directly impact household and livestock damage, food security, and public health. Ecologically Based Rodent Management (EBRM) seeks sustainable solutions for the mitigation of rodent damage through assessments of rodent population dynamics, agro‐ecosystems, and socio‐cultural contexts. We adopt a comparative approach across 3 rural Afro‐Malagasy smallholder farming regions in South Africa, Tanzania, and Madagascar to assess the household impacts of rodent pests and current perceptions and preferences associated with several rodent control measures. We conducted focus group questionnaires and interviews in different study site locations. Rodents assert multiple impacts on Afro‐Malagasy farmers demonstrating recurrent and emerging agricultural and household costs, and public health impacts. We identify a significant knowledge gap in educating communities about the application of different EBRM approaches in favor of acute poisons that are perceived to be more effective. Cultural issues and taboos also have a significant impact on the social acceptance of rodent hunting as well as biological control using indigenous predators. We advocate for an enhanced investigation of the socio‐cultural beliefs associated with different rodent practices to understand the factors underlying social acceptance. A collaborative approach that integrates the perspectives of target communities to inform the design of EBRM initiatives according to the specific agro‐ecosystem and socio‐cultural context is necessary to ensure programmatic success. [ABSTRACT FROM AUTHOR]

As the global road network expands, roads pose an emerging threat to wildlife populations. One way in which roads can affect wildlife is wildlife-vehicle collisions, which can be a significant cause of mortality through roadkill. In order to successfully mitigate these problems, it is vital to understand the factors that can explain the distribution of roadkill. Collecting the data required to enable this can be expensive and time consuming, but there is significant potential in partnering with organisations that conduct existing road patrols to obtain the necessary data. We assessed the feasibility of using roadkill data collected daily between 2014 and 2017 by road patrol staff from a private road agency on a 410 km length of the N3 road in South Africa. We modelled the relationship between a set of environmental and anthropogenic variables on the number of roadkill carcasses, using serval (Leptailurus serval) as a model species. We recorded 5.24 serval roadkill carcasses/100 km/year. The number of carcasses was related to season, the amount of wetland, and NDVI, but was not related to any of the anthropogenic variables we included. This suggests that roadkill patterns may differ greatly depending on the ecology of species of interest, but targeting mitigation measures where roads pass through wetlands may help to reduce serval roadkill. Partnering with road agencies for data collection offers powerful opportunities to identify factors related to roadkill distribution and reduce the threats posed by roads to wildlife. [ABSTRACT FROM AUTHOR]

Rodent pests are especially problematic in terms of agriculture and public health since they can inflict considerable economic damage associated with their abundance, diversity, generalist feeding habits and high reproductive rates. To quantify rodent pest impacts and identify trends in rodent pest research impacting on small-holder agriculture in the Afro-Malagasy region we did a systematic review of research outputs from 1910 to 2015, by developing an a priori defined set of criteria to allow for replication of the review process. We followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines. We reviewed 162 publications, and while rodent pest research was spatially distributed across Africa (32 countries, including Madagascar), there was a disparity in number of studies per country with research biased towards four countries (Tanzania [25%], Nigeria [9%], Ethiopia [9%], Kenya [8%]) accounting for 51% of all rodent pest research in the Afro-Malagasy region. There was a disparity in the research themes addressed by Tanzanian publications compared to publications from the rest of the Afro-Malagasy region where research in Tanzania had a much more applied focus (50%) compared to a more basic research approach (92%) in the rest of the Afro-Malagasy region. We found that pest rodents have a significant negative effect on the Afro-Malagasy small-holder farming communities. Crop losses varied between cropping stages, storage and crops and the highest losses occurred during early cropping stages (46% median loss during seedling stage) and the mature stage (15% median loss). There was a scarcity of studies investigating the effectiveness of various management actions on rodent pest damage and population abundance. Our analysis highlights that there are inadequate empirical studies focused on developing sustainable control methods for rodent pests and rodent pests in the Africa-Malagasy context is generally ignored as a research topic. [ABSTRACT FROM AUTHOR]

Data on the population size and trends of large carnivores remains the cornerstone of effective management and conservation programs. However, such data are rarely available for the majority of large carnivore species. Furthermore, large carnivore research is often directed towards formally protected areas. There is therefore a need to improve our knowledge regarding the population ecology of large carnivores in non-protected areas. In this study we use camera trapping in conjunction with spatially explicit mark-recapture models to estimate leopard Panthera pardus density across different land use types in the Waterberg Biosphere, South Africa. Estimated densities (mean ± SE) ranged from 6.59 (± 5.2/100 km2) on a matrix of commercial game and livestock farms to 5.35 (± 2.93/100 km2) and 4.56 (± 1.35/100 km2) on two protected areas (Lapalala and Welgevonden respectively). Although density estimates had large confidence intervals we suggest that these results indicate similar densities across the three sites. These results support other studies suggesting that non-protected areas can harbour as dense leopard populations as protected areas, and can therefore not be neglected in the management of leopards. [ABSTRACT FROM AUTHOR]

Estimation of survival rates is important for developing and evaluating conservation options for large carnivores. However, telemetry studies for large carnivores are often characterized by small sample sizes that limit meaningful conclusions. We used data from 10 published and 8 unpublished studies of leopards Panthera pardus in southern Africa to estimate survival rates and investigate causes of leopard mortality. Mean survival rates were significantly lower in non-protected (0.55 ± SE 0.08) compared to protected areas (0.88 ± 0.03). Inside protected areas juveniles had significantly lower survival (0.39 ± 0.10) compared to subadults (0.86 ± 0.07) and adults (0.88 ± 0.04). There was a greater difference in cause of death between protected and non-protected areas for females compared to males, with people being the dominant cause of mortality outside protected areas for both females and males. We suggest there is cause for concern regarding the sustainability of leopard populations in South Africa, as high female mortality may have severe demographic effects and a large proportion of suitable leopard habitat lies in non-protected areas. However, because a large proportion of deaths outside protected areas were attributed to deliberate killing by people, we suggest that management interventions may have the potential to increase leopard survival dramatically. We therefore stress the urgency to initiate actions, such as conflict mitigation programmes, to increase leopard survival in non-protected areas. [ABSTRACT FROM AUTHOR]

Management zones feature prominently in conservation planning, particularly at large spatial scales, but prioritization of areas of concern is required to focus efforts and limited resources. Human-mediated mortality constitutes a major threat to species persistence, particularly for widespread carnivores that undergo harvest and population control, such as the leopard ( Panthera pardus). In this study, we evaluated the extent and spatial distribution of legal anthropogenic offtake of leopards to identify de facto refugia and ecological traps across Limpopo Province, South Africa. We defined refugia as management units with offtake levels below an established sustainable harvest rate, and ecological traps as management units with offtake exceeding the sustainable harvest rate. We assessed offtake at three geographical scales using trophy hunting permit records alone, and then in combination with problem leopard permit records to investigate the compounding effect of additional forms of offtake and the potential for management scale mismatching. Across Limpopo Province, high leopard offtake created fewer areas of refuge than ecological traps. Refugia were smaller in size and within close proximity of ecological traps. Human-mediated leopard mortality occurred mostly in prime leopard habitat. Finer-scaled management units resulted in fewer ecological traps and more refugia, and enables authorities to focus conservation attention in areas of concern. Human-mediated leopard mortality exceeded the annual offtake rate considered sustainable. Our study highlights the importance of assessing both the scale and distribution of the harvest, whilst also considering alternative forms of offtake, when devising harvest management strategies. Management scale mismatching and high human-mediated leopard mortality is of particular concern in Limpopo Province, as such, we propose an adaptive, science-based regulatory framework aimed at improving leopard harvest strategies. [ABSTRACT FROM AUTHOR]

Science and conservation are often driven by different agendas, partly because many researchers are reluctant to tackle applied topics perceived to be less competitive for publishing or too impractical to study. Consequently, research often fails to contribute meaningfully to conservation outcomes. We use leopards Panthera pardus in South Africa to illustrate this mismatch between research and conservation priorities. A review of the scientific literature showed that leopard studies in South Africa focused disproportionately on basic research, particularly on leopard feeding ecology inside protected areas. Academics were responsible for most articles but avoided applied studies, even though they were published in higher impact journals and took less time to undertake. An assessment of active leopard projects further demonstrated that studies were clumped in areas of low conservation concern and most failed to publish their findings. Many projects were also funded by commercial volunteer programs with financial incentives for conducting research. We recommend that leopard researchers in South Africa and carnivore researchers more widely engage with practitioners to ensure the most pressing issues are addressed. Scientists must also situate their research in a broader conservation context and evaluate the outcomes of management decisions. Finally, continued funding and permissions for research should at a minimum be contingent on research outputs being published in the peer-reviewed literature. [ABSTRACT FROM AUTHOR]

The ability to determine the prey-specific biomass intake of large predators is fundamental to their conservation. In the absence of actual prey data, researchers generally use a 'unit mass' method (estimated as 3/4 adult female mass) to calculate the biomass intake of predators. However, differences in prey preference and range across geographic regions are likely to have an influence on biomass calculations. Here we investigate the influence of estimated prey mass on leopard biomass calculations, and subsequent carrying capacity estimates, in an understudied mountain population. Potential leopard feeding sites were identified using global positioning system (GPS) location clusters obtained from GPS collars. We investigated 200 potential leopard feeding sites, of which 96 were actual feeding sites. Jaw bones, horns, hooves, and other indicative bones were used to determine gender and age of prey items, which were subsequently used to calculate mass of each prey item based on previously published values. There were significant differences in the biomass values calculated using the traditional unit mass method and the calculated prey masses obtained from leopard feeding sites. However, there were no considerable differences in the carrying capacity estimates using the preferred prey species model and leopard density estimates calculated using a non-biased spatial approach, which suggests that estimating carnivore carrying capacity based on 3/4 adult female masses is a reliable method also for the mountain population in this study. [ABSTRACT FROM AUTHOR]

Simple Summary: Wildlife ecological patterns are driven not only by environmental and biological contexts, but also by landscape-management schemes that shape those contexts. The present study aims to determine the effect of different environmental factors (including management schemes) on the occurrence patterns of a southern African small mammal community. Based on a landscape where three land-use contexts that differ in their levels of human presence and/or where activities coexist (private ecotourism reserve, mixed farms and traditional communal areas), and by using a body-size-based approach (i.e., using two size-based rodent groups—medium and small—as models), we found that the mean relative abundance of medium-sized species did not differ across the management contexts, but small species' mean relative abundance was higher in the game reserve. The overall variation in rodent abundance was negatively affected by ungulate presence (possibly linked to a decrease in food availability) and by human presence (increased disturbance). Rodent abundance seems to be influenced by environmental gradients that are directly linked to varying management priorities across land uses, meaning that these communities might not benefit uniformly by the increased amount of habitat promoted by the commercial wildlife industry. South Africa's decentralized approach to conservation entails that wildlife outside formally protected areas inhabit complex multi-use landscapes, where private wildlife business (ecotourism and/or hunting) co-exist in a human-dominated landscape matrix. Under decentralized conservation, wildlife is perceived to benefit from increased amount of available habitat, however it is crucial to understand how distinct management priorities and associated landscape modifications impact noncharismatic taxa, such as small mammals. We conducted extensive ink-tracking-tunnel surveys to estimate heterogeneity in rodent distribution and investigate the effect of different environmental factors on abundance patterns of two size-based rodent groups (small- and medium-sized species), across three adjacent management contexts in NE KwaZulu-Natal, South Africa: a private ecotourism game reserve, mixed farms and traditional communal areas (consisting of small clusters of houses interspersed with grazing areas and seminatural vegetation). Our hypotheses were formulated regarding the (1) area typology, (2) vegetation structure, (3) ungulate pressure and (4) human disturbance. Using a boosted-regression-tree approach, we found considerable differences between rodent groups' abundance and distribution, and the underlying environmental factors. The mean relative abundance of medium-sized species did not differ across the three management contexts, but small species mean relative abundance was higher in the game reserves, confirming an influence of the area typology on their abundance. Variation in rodent relative abundance was negatively correlated with human disturbance and ungulate presence. Rodent abundance seems to be influenced by environmental gradients that are directly linked to varying management priorities across land uses, meaning that these communities might not benefit uniformly by the increased amount of habitat promoted by the commercial wildlife industry. [ABSTRACT FROM AUTHOR]