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Farrah C Phillips,1,* Gitte S Jensen,2 Lucas Showman,3 Rachel Tonda,1 Geoff Horst,4 Robert Levine4,* 1Kemin Industries, Animal Nutrition and Health of North America, Des Moines, IA 50317, USA; 2NIS Labs, Klamath Falls, OR 97601, USA; 3W.M. Keck Metabolomics Research Laboratory, Iowa State University, Ames, IA, USA; 4Kemin Industries, Plymouth, MI 48170, USA *These authors contributed equally to this work Purpose: The purpose of this work was to determine the pro- and anti-inflammatory properties of the single-cell organism Euglena gracilis (EG) and various fractions of its whole biomass.Methods: Heterotrophically grown EG was tested, along with its aqueous fraction (E-AQ), the intact linear β-glucan paramylon granules (PAR), and alkaline-solubilized paramylon. Peripheral blood mononuclear cell cultures were treated with the test products and analyzed for a variety of cellular responses. Immune cell activation was evaluated by flow cytometry detection of CD69 levels on CD3−CD56+ NK cells, CD3+CD56+ NKT cells, and monocytes, and cytokines were analyzed from the cell culture supernatants. Antioxidant capacity was measured by Folin–Ciocalteu assay and cellular antioxidant protection and MTT assays.Results: EG and E-AQ were the most effective in driving immune cell responses as measured by CD69 upregulation on NK and NKT cells and proinflammatory (tumor necrosis factor, IL-6, IL-1β) cytokine production. None of the test products effectively stimulated monocyte. EG and PAR inhibited reactive oxygen species under conditions of oxidative stress. E-AQ contained antioxidants capable of providing cellular antioxidant protection from oxidative damage and protection of mitochondrial function under inflammatory conditions.Conclusion: The effects of EG on immune function are only partially attributable to the content of the β-glucan, paramylon. The regulation of additional cellular responses, such a reactive oxygen species production and resistance to oxidative stress, is likely mediated by currently unknown molecules found in the EG cell. Keywords: CAP-e, oxidative stress, PAMP, Dectin-1, paramylon, mannitol

Abstract Background Genetic differences between yeast strains used in wine-making may account for some of the variation seen in their fermentation properties and may also produce differing sensory characteristics in the final wine product itself. To investigate this, we have determined genomic differences among several Saccharomyces cerevisiae wine strains by using a "microarray karyotyping" (also known as "array-CGH" or "aCGH") technique. Results We have studied four commonly used commercial wine yeast strains, assaying three independent isolates from each strain. All four wine strains showed common differences with respect to the laboratory S. cerevisiae strain S288C, some of which may be specific to commercial wine yeasts. We observed very little intra-strain variation; i.e., the genomic karyotypes of different commercial isolates of the same strain looked very similar, although an exception to this was seen among the Montrachet isolates. A moderate amount of inter-strain genomic variation between the four wine strains was observed, mostly in the form of depletions or amplifications of single genes; these differences allowed unique identification of each strain. Many of the inter-strain differences appear to be in transporter genes, especially hexose transporters (HXT genes), metal ion sensors/transporters (CUP1, ZRT1, ENA genes), members of the major facilitator superfamily, and in genes involved in drug response (PDR3, SNQ1, QDR1, RDS1, AYT1, YAR068W). We therefore used halo assays to investigate the response of these strains to three different fungicidal drugs (cycloheximide, clotrimazole, sulfomethuron methyl). Strains with fewer copies of the CUP1 loci showed hypersensitivity to sulfomethuron methyl. Conclusion Microarray karyotyping is a useful tool for analyzing the genome structures of wine yeasts. Despite only small to moderate variations in gene copy numbers between different wine yeast strains and within different isolates of a given strain, there was enough variation to allow unique identification of strains; additionally, some of the variation correlated with drug sensitivity. The relatively small number of differences seen by microarray karyotyping between the strains suggests that the differences in fermentative and organoleptic properties ascribed to these different strains may arise from a small number of genetic changes, making it possible to test whether the observed differences do indeed confer different sensory properties in the finished wine.

We present a quantitative evaluation of the effectiveness of a newly developed introductory course, Geology of Mexico, in attracting Hispanic students, encouraging them to take more geology courses, and recruiting them to the major. The student population in the Geology of Mexico course was 93% Hispanic compared with 18.5% in Physical Geology. We found that Hispanic students in Physical Geology earned lower grades than did nonminority students, while Hispanic students in Geology of Mexico earned grades comparable with nonminority students in Physical Geology. Overall, Geology of Mexico students also showed more positive attitude changes and were more likely to take another geology course. The recruitment rate into the major for Hispanic students in Geology of Mexico was 4.7% compared with 3% in Physical Geology. The recruitment rate for nonminority students in Physical Geology was 4.9%. We believe the difference in outcome for Hispanic students is due to a strong cohort effect enhanced by (1) the required lab component and (2) many students knowing one another because they belong to the Hispanic-serving organizations on campus that promote our course.

Vacuum ultraviolet (VUV) photodissociation of N2 molecules is a source of reactive N atoms in the interstellar medium. In the energy range of VUV optical excitation of N2, the N–N triple bond cleavage leads to three types of atoms: ground-state N(4S) and excited-state N(2P) and N(2D). The latter is the highest reactive and it is believed to be the primary participant in reactions with hydrocarbons in Titan's atmosphere. Experimental studies have observed a non-monotonic energy dependence and non-statistical character of the photodissociation of N2. This implies different dissociation pathways and final atomic products for different wavelength regions in the sunlight spectrum. We here apply ab initio quantum chemical and nonadiabatic quantum dynamical techniques to follow the path of an electronic state from the excitation of a particular singlet 1Σ +u and 1Πu vibronic level of N2 to its dissociation into different atomic products. We simulate dynamics for two isotopomers of the nitrogen molecule, 14N2 and 14N15N for which experimental data on the branching are available. Our computations capture the non-monotonic energy dependence of the photodissociation branching ratios in the energy range 108 000–116 000 cm−1. Tracing the quantum dynamics in a bunch of electronic states enables us to identify the key components that determine the efficacy of singlet to triplet population transfer and therefore predissociation lifetimes and branching ratios for different energy regions. [ABSTRACT FROM AUTHOR]

We introduce a practical method for compacting the time evolution of the quantum state of a closed physical system. The density matrix is specified as a function of a few time-independent observables where their coefficients are time-dependent. The key mathematical step is the vectorization of the surprisal, the logarithm of the density matrix, at each time point of interest. The time span used depends on the required spectral resolution. The entire course of the system evolution is represented as a matrix where each column is the vectorized surprisal at the given time point. Using the singular value decomposition (SVD) of this matrix, we generate realistic approximations for the time-independent observables and their respective time-dependent coefficients. This allows for a simplification of the algebraic procedure for determining the dominant constraints (the time-independent observables) in the sense of the maximal entropy approach. A non-stationary coherent initial state of a Morse oscillator is used to introduce the approach. We derive the analytical exact expression for the surprisal as a function of time, and this offers a benchmark for comparison with the accurate but approximate SVD results. We discuss two examples of a Morse potential of different anharmonicities, H2 and I2 molecules. We further demonstrate the approach for a two-coupled electronic state problem, the well-studied non-radiative decay of pyrazine from its bright state. Five constraints are found to be enough to capture the ultrafast electronic population exchange and to recover the dynamics of the wave packet in both electronic states. [ABSTRACT FROM AUTHOR]

Atto- and sub-femto-photochemistry enables preparation of molecules in a coherent superposition of several electronic states. Recently [Ajay et al., Proc. Natl. Acad. Sci. U. S. A. 115, 5890–5895 (2018)], we examined an effect of the nuclear mass during the non-adiabatic transfer between strongly coupled Rydberg and valence electronic states in N2 excited by an ultrafast pulse. Here, we develop and analyze an algebraic description for the density matrix and its logarithm, the surprisal, in such a superposition of states with a focus on the essentially quantum effect of mass. This allows for the identification of a few observables that accurately characterize the density matrix of the system with several coupled electron-nuclear states. We compact the time evolution in terms of time-dependent coefficients of these observables. Using the few observables, we derive an analytical expression for the time-dependent surprisal. This provides a mass-dependent phase factor only in the observables off-diagonal in the electronic index. The isotope effect is shown to be explicitly driven by the shift in the equilibrium position of the valence state potential. It is analytically given as a time-dependent phase factor describing the interference in the overlap of the two wave packets on the coupled electronic states. This phase factorizes as a product of classical and quantal contributions. [ABSTRACT FROM AUTHOR]

Our information theoretic considerations suggest that the essence of phase transitions in condensed matter is the change in entropy as reflected in the change in the number of isomers between two phases. The explicit number of isomers as a function of size is computed using a graph theoretic approach that is compared to a direct count for smaller systems. This allows us to apply a common approach to both nanosystems and their macroscopic limit. The entropy increases very rapidly with size with the results that replacing the actual distribution over size by an average is not an accurate approximation. That the phase transition is a sharp function of the temperature is due to the high heat capacity of both the solid and liquid phases. The difference in entropy at the transition is related to the Trouton--Richards considerations. The finite width of the boundary between two phases of a finite system is related to the inherent uncertainty product that is derived from the maximum entropy formalism and that is a result of the fluctuations about equilibrium. As the system size increases, the boundary becomes sharper and one recovers the usual thermodynamic description. [ABSTRACT FROM AUTHOR]

Jennifer K Lee,1– 3 Sean Tackett,4,5 Kimberly A Skarupski,2,4,6 Kathy Forbush,7 Barbara Fivush,2,3 Maria Oliva-Hemker,2,3 Rachel B Levine2,4 1Department of Anesthesiology and Critical Care Medicine, Johns Hopkins University School of Medicine (JHU), Baltimore, MD, USA; 2Office of Faculty, JHU, Baltimore, MD, USA; 3Department of Pediatrics, JHU, Baltimore, MD, USA; 4Department of Medicine, JHU, Baltimore, MD, USA; 5Biostatistics, Epidemiology, and Data Management Core, JHU, Baltimore, MD, USA; 6Bloomberg School of Public Health, JHU, Baltimore, MD, USA; 7Human Resources, Office of Talent Management, JHU, Baltimore, MD, USACorrespondence: Jennifer K Lee, Email Jennifer.lee@jhmi.eduPurpose: The number of women in high-level leadership in academic medicine remains disproportionately low. Early career programs may help increase women’s representation in leadership. We evaluated the Early Career Women’s Leadership Program (ECWLP). We hypothesized that participants would rate themselves as having increased confidence in their leadership potential, improved leadership skills, and greater alignment between their goals for well-being and leading after the program. We also explored the participants’ aspirations and confidence around pursuing high-level leadership before and after the program.Methods: We surveyed women physicians and scientists before and after they participated in the 2023 ECWLP, consisting of 11 seminars over six months. We analyzed pre- and post-program data using Wilcoxon signed-rank tests. We analyzed answers to open-ended questions with a content analysis approach.Results: 47/51 (92%) participants responded, and 74% answered pre- and post-program questionnaires. Several metrics increased after the program, including women’s confidence in their ability to lead (p< 0.001), negotiate (p

We show in a joint experimental and theoretical study that ultrafast femto-second (fs) electronic coherences can be characterized in semi-conducting colloidal quantum dot (QD) assemblies at room temperature. The dynamics of the electronic response of ensembles of CdSe QDs in the solution and of QD dimers in the solid state is probed by a sequence of 3 fs laser pulses as in two-dimensional (2D) electronic spectroscopy. The quantum dynamics is computed using an excitonic model Hamiltonian based on the effective mass approximation. The Hamiltonian includes the Coulomb, spin–orbit, and crystal field interactions that give rise to the fine structure splittings. In the dimers studied, the interdot distance is sufficiently small to allow for an efficient interdot coupling and delocalization of the excitons over the two QDs of the dimer. To account for the inherent few percent size dispersion of colloidal QDs, the optical response is modeled by averaging over an ensemble of 2000 dimers. The size dispersion is responsible for an inhomogeneous broadening that limits the lifetimes of the excitonic coherences that can be probed to about 150 fs–200 fs. Simulations and experimental measurements in the solid state and in the solution demonstrate that during that time scale, a very rich electronic coherent dynamics takes place that involves several types of intradot and interdot (in the case of dimers) coherences. These electronic coherences exhibit a wide range of beating periods and provide a versatile basis for a quantum information processing device on a fs time scale at room temperature. [ABSTRACT FROM AUTHOR]

Progress toward quantum technologies continues to provide essential new insights into the microscopic dynamics of systems in phase space. This highlights coherence effects whether these are due to ultrafast lasers whose energy width spans several states all the way to the output of quantum computing. Surprisal analysis has provided seminal insights into the probability distributions of quantum systems from elementary particle and also nuclear physics through molecular reaction dynamics to system biology. It is therefore necessary to extend surprisal analysis to the full quantum regime where it characterizes not only the probabilities of states but also their coherence. In principle, this can be done by the maximal entropy formalism, but in the full quantum regime, its application is far from trivial [S. Dagan and Y. Dothan, Phys. Rev. D 26, 248 (1982)] because an exponential function of non-commuting operators is not easily accommodated. Starting from an exact dynamical approach, we develop a description of the dynamics where the quantum mechanical surprisal, a linear combination of operators, plays a central role. We provide an explicit route to the Lagrange multipliers of the system and identify those operators that act as the dominant constraints. [ABSTRACT FROM AUTHOR]

Few-cycle ultrashort IR pulses allow excitation of coherently coupled electronic states toward steering nuclear motions in molecules. We include in the Hamiltonian the excitation process using an IR pulse of a definite phase between its envelope and carrier wave and provide a quantum mechanical description of both multiphoton excitation and ionization. We report on the interplay between these two processes in shaping the ensuing coupled electronic-nuclear dynamics in both the neutral excited electronic states and the cationic states of the diatomic molecule LiH. The dynamics is described by solving numerically the time-dependent Schrodinger equation at nuclear grid points using the partitioning technique with a subspace of ten coupled bound states and a subspace of discretized continuous states for the photoionization continua. We show that the coherent dynamics in the neutral subspace is strongly affected by the amplitude exchanges with the ionization continua during the pulse, as well as by the onset of nuclear motion. The coupling to the cation and the resulting ionization do not preclude the control of the motion in the neutral through control of the carrier-envelope phase. Our methodology provides visualization in space and in time not only of the entangled vibronic wave packet in the neutral states but also of the wave packet of the outgoing photoelectron. Thereby, we can spatially and temporally follow the dynamics of the outgoing and bound electrons during the pulse and the nuclear motion in the bound subspace while moving through nonadiabatic coupling regions after the pulse. [ABSTRACT FROM AUTHOR]

Recent summer surveys of the northeastern Chukchi Sea found pelagic fishes were dominated by large numbers of age-0 Arctic cod (Boreogadus saida , Gadidae) and walleye pollock (Gadus chalcogrammus , Gadidae), while adult fishes were comparatively scarce. The source and fate of these young fishes remain unclear, as sampling in this region is impeded by seasonal ice cover much of the year. Seafloor-mounted echosounders were deployed at three locations in the northeastern Chukchi Sea from 2017 to 2019 to determine the movement and seasonal variability of these age-0 gadids. These observations indicated that the abundance of pelagic fishes and community composition on the Chukchi Sea shelf were highly variable on seasonal time scales, with few fish present in winter. Tracking indicated that fish movements were strongly correlated with local currents. Fishes were primarily displaced to the northeast in summer and fall, with periodic reversals towards the southwest driven by changes in regional wind patterns. The flux of fishes past the moorings indicated that the prevailing northward currents transport a large proportion of the age-0 pelagic fishes present on the Chukchi shelf in summer to the northeast by fall, leading to relatively low abundances of age-1+fishes in this environment. [ABSTRACT FROM AUTHOR]