21 results on '"Korkmaz, Büşra"'
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2. Synthesis, Antimicrobial Activities, and Molecular Modeling Studies of Agents for the Sortase A Enzyme.
- Author
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Tatar Yilmaz, Gizem, Yayli, Nurettin, Tüzüner, Tamer, Bozdal, Gözde, Salmanli, Merve, Renda, Gülin, Korkmaz, Büşra, Bozdeveci, Arif, and Alpay Karaoğlu, Şengül
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- 2024
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3. Analysis of Volatile Constituent by Hydrodistillation and Solid‐Phase Microextraction Techniques and Antimicrobial and Scolicidal Activities of Essential Oil and Soxhlet Extracts of Ulva rigida grown in Turkey.
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Yücel, Tayyibe Beyza, Korkmaz, Büşra, Cebeci, Tuğba, Karaman, Ülkü, Arici, Yeliz Kasko, Fandakli, Seda, and Gül, Tuba
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- 2023
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4. Dihydroisocoumarins and Phenylglycosides from Scorzonera longiana, Their Antimicrobial Activities and Molecular Docking Studies.
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Korkmaz, Büşra, Renda, Gülin, Bozdal, Gözde, Coşkunçelebi, Kamil, Bozdeveci, Arif, Uzuner, Ugur, and Yaylı, Nurettin
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- 2023
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5. Two new dihydroisocoumarins and terpenoids from Scorzonera longiana Sümbül an endemic species to Turkey and their antimicrobial activity.
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Korkmaz, Büşra, Renda, Gülin, Erik, İshak, Kılıç, Gözde, Coşkunçelebi, Kamil, and Yaylı, Nurettin
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TERPENES ,YERSINIA pseudotuberculosis ,ESCHERICHIA coli ,MYCOBACTERIUM smegmatis ,MYCOBACTERIA ,DISC diffusion tests (Microbiology) ,ENDEMIC species - Abstract
Two new dihydroisocoumarins (scorzolongin I (1), and scorzolongin II (2)) and nine known compounds (3′,5′-dimethoxy hydrangenol (scorzolongin III, 3), cladantholide (4), dammar-24-ene-3β-ol (5), taraxasterol (6), β-sitosterol (7), mangifgerursanone (8), and a mixture of α-amyrenone (9a), β-amyrenone (9b), and dammar-24-ene-3-one (9c) in about 1:1:2 ratio) were identified from the dichloromethane fraction of Scorzonera longiana. The structure of all compounds (1–9a–c) were elucidated by extensive 1D and 2D NMR (
1 H,13 C/APT, COSY, HMBC, HSQC, and NOESY) spectroscopy, UV, FT-IR, and LC-QTOF-MS data and by comparison of their NMR data with the literature. These compounds have been isolated from S. longiana for the first time. An antimicrobial assay against eight microorganisms was applied to isolated compounds 1–3. Scorzolongin I, and scorzolongin II, and scorzolongin III showed notable activity against gram (-) (Escherichia coli and Yersinia pseudotuberculosis) and fungi (Candida albicans, Saccharomyces cerevisiae) with 20 mm inhibition zone each. Scorzolongin II (2) exhibited strong activity against E. coli, Y. pseudotuberculosis, Mycobacterium smegmatis C. albicans, S. cerevisiae with MIC value of 33.8 μg/mL. [ABSTRACT FROM AUTHOR]- Published
- 2023
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6. Karaciğer kanserinde ilaç taramalari için in vivo model olarak zebra baliğinin incelenmesi: fenotiyazinlerin rolü
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Korkmaz, Büşra and Karakayalı, Özlen Konu
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Cholesterol ,Hepatocellular carcinoma ,Phenothiazines ,Xenograft ,Drug repurposing ,Sorafenib ,Zebrafish ,In vivo drug screening - Abstract
Cataloged from PDF version of article. Thesis (Master's): Bilkent University, Department of Molecular Biology and Genetics, İhsan Doğramacı Bilkent University, 2021. Includes bibliographical references (leaves 103-113). Hepatocellular carcinoma (HCC) is one of the most dangerous cancer types and sorafenib (SFB) is a commonly used drug against HCC, being the only FDA-approved medication until 2018. However, its limited efficacy and severe side effects emphasize the importance of developing alternative approaches. Regulation of cholesterol has been implicated in the progression of various cancers including HCC. Phenothiazines, which are in use as antipsychotic drugs and with effects on cholesterol biosynthesis, have drawn recent attention as anti-cancer drugs against different cancers. The elucidation of how phenothiazines exert their effects at cellular level might pave the way for proposing better strategies for HCC treatment. Zebrafish serves as a good cancer model for in vivo validations, since it enables efficient tumor formation and tracking. Its conserved genes and similar organ system to human make it even better of a model to reveal both molecular and morphological alterations caused by drugs. Based on previous cell viability studies from our lab, the combination of trifluoperazine (TFP) with SFB was found to exhibit synergism in Hep3B cells, while it was antagonistic in SkHep1 cells. Moreover, RNA-seq analysis on Hep3B cells has demonstrated that steroid biosynthesis and cholesterol metabolism was among the modulated pathways. Therefore, in the present thesis, the regulation of cholesterol levels in response to phenothiazine derivatives was investigated in HCC cell lines SkHep1 and Hep3B. The combinatorial approach was examined on Huh7 cells in terms of the expression of cholesterol biosynthesis genes based on RT-qPCR. After showing the ability of phenothiazine derivatives and TFP-SFB combinations to modulate cellular cholesterol, zebrafish drug screens were performed to determine applicable derivative and combination doses. Assessment of safe doses for TFP, SFB and their combination directed us for xenograft studies, which resulted in enhanced Hep3B cell survival by the combination of low dose (6 μM) TFP and 1 μM of SFB. This finding was further validated based on Alu-based DNA quantifiation, a powerful method we have established. With the help of RNA-seq analysis results, orthologous zebrafish genes, involved in cholesterol biosynthesis were identified and used in cross-species testing. The impact of TFP on liver vasculature was evaluated using transgenic (Fli1a:EGFP) zebrafish and found insignificant. Overall, the findings presented in this thesis highlight that TFP alone or in combination was able to change cellular cholesterol levels and tumor growth. by Büşra Korkmaz M.S.
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- 2021
7. SHIGERU BAN AND 'TEMPORARY SHELTER' CONCEPT
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ÖZCAN, Uğur, GÜLER, Betül, and KORKMAZ, Büşra
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Social ,Sustainable Architecture,Earthquake,Temporary Shelter,Shigeru Ban ,Sürdürülebilir Mimarlık,Deprem,Geçici Barınak,Shigeru Ban ,Sosyal - Abstract
Doğal afetler, insan yaşamında olumsuz etkilere sebep olmaktadır. Ne zaman meydana geleceği öngörülemeyen doğal afetlerin olası sonuçlarına karşı, her zaman tedbirli olmak gerekmektedir. Afet anında, öncesinde ve sonrasında pek çok sorun ile karşılaşılsa da bunlardan en önemlisi 'barınacak yer' sorunudur. Çünkü deprem, sel, kasırga gibi yıkıcı sonuçlar doğuran doğal afetler, insanların en temel ihtiyaçlarından birisi olan barınma ihtiyacının karşılanamamasına sebep olabilmektedir. Genellikle, yardım kuruluşları tarafından dağıtılan, çadır tipi ba-rınaklar, tüm ihtiyaçlara cevap verebilecek ve uzun süreli kullanımlarda konfor sağlayabilecek nitelikte değildir. Bu sebeple, mevcut koşullara uyum sağlayabi-lecek şekilde tasarlanmış olan 'geçici barınaklar' ön plana çıkmaktadır. Bu barı-nakların, acil durumlarda hızlıca inşa edilebilir özellikte olması gerekmektedir. Dolayısıyla, yapımında basit çözümler ve ekonomik yöntemlerle, kolay ulaşılabi-lir malzemelerden faydalanılması önem teşkil eder. Geri dönüştürülebilir ve sür-dürülebilir tasarımları ile adından sıkça söz ettiren ünlü mimar Shigeru Ban, afet sonrası ihtiyaçlar sonucunda tasarladığı barınak sistemleriyle, afet bölgelerinde yaşanılan barınak sorununa da çözüm üretmiştir. Tasarımlarını oluştururken afet-lerin meydana geldiği bölgede bulunabilecek malzemeleri, bölgenin iklimini ve bölge halkının kültürünü göz önünde bulunduran mimar, barınakların inşa süre-cinde yerel halkın katıldığı, katılımcı üretim biçimine önem vermiştir. Bu sayede barınakların tasarımında olduğu kadar, inşa aşamasında da sürdürülebilirliğin sağlanması mümkün olmaktadır. İnşa faaliyetlerine katılan yerel halk, geçici ba-rınak konusunda bilinç, yapım yöntemleri konusunda bilgi ve beceri kazanmak-tadır. Bu çalışma kapsamında, Ban'ın farklı afet bölgeleri için tasarladığı, farklı barınak tipleri incelenmiş, bu inceleme sonucunda, söz konusu örneklerin ortak noktaları belirlenmiştir. Seçilen geçici barınak tasarımlarının yapım yöntemleri benzer ol-makla birlikte, yerel özelliklere bağlı olarak farklılıklar da göstermektedir. Ça-lışmada ele alınan örneklerin, afet sonrası istenmeyen bir durum oluşması halin-de, yaşanabilecek barınma problemlerine geçici çözümler olabileceği düşünül-mektedir. Bu barınakların üretim yöntemlerinin basit eğitim faaliyetleri ile öğre-tilmesi ve üretime yerel katılım bilincinin sağlanması, afet sonrasında elde olabi-lecek en etkili toplumsal avantajlardan biri olacaktır., Natural disasters cause adverse impact on human life. It is always necessary to be cautious about the possible consequences of natural disasters that cannot be predicted as to when they will occur. Even though many problems are encoun-tered during, before and after the disaster, the most important of these problems is ‘sheltering’. Because natural disasters such as earthquakes, floods, and hurri-canes, that have destructive outcomes, can result in the failure to provide shelter which is one of the most fundamental needs of human beings. Tent type shelters, that are usually distributed by charities, are not capable of meeting all needs and providing comfort for long-term use. Therefore, ‘temporary shelters’ that are designed to adapt to existing conditions rise to prominence. It is necessary for these shelters to be rapidly buildable in emergencies. Hence, it is important to benefit from easily accessible materials with simple solutions and economic methods in its construction. Famous architect Shigeru Ban, who has made a name for himself with his recyclable and sustainable designs, has also generated a solution for sheltering problems in disaster areas, with a sheltering system he designed as a result of post-disaster needs. He considered the materials that can be found in the region where the disaster occurred, climate of the region, and the culture of the local people while creating his design. He emphasized the partici-patory production style that the local people participate in the construction pro-cess of the shelters. Thus, it is possible to provide sustainability in the construc-tion process as well as in the design of the shelters. Local community, that partic-ipate in the construction, gain awareness on temporary sheltering, and knowledge and skills on construction methods. Within the scope of this study, different type of shelters for different disaster areas designed by Ban were ana-lyzed, and as a result of this analysis common points of these examples were es-tablished. While the construction methods of the chosen temporary shelter de-signs are similar, they also differ depending on local characteristics. It is thought that the examples discussed in the study can be temporary solutions to the shel-tering problems that may be experienced in the event of an undesirable situation after a disaster. Teaching the production methods of these shelters with simple educational activities and providing awareness of local participation in the pro-duction will be one of the most effective social advantages that can be obtained after the disaster.
- Published
- 2021
8. Chemical variation, antimicrobial, nitric oxide scavenging activities and tyrosinase inhibition of essential oils and solvent extracts from filipendula vulgaris moench growing in Turkey
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Fandaklı, Seda, Korkmaz, Büşra, Faiz, Özlem, Kılıç, Gözde, Erik, İshak, Terzioğlu, Salih, Yaylı, Nurettin, RTEÜ, Fen - Edebiyat Fakültesi, Kimya Bölümü, and Faiz, Özlem
- Subjects
Biological activity ,Filipendula vulgaris ,SPME ,MS ,GC-FID ,Essential oil - Abstract
Volatile organic compositions of the essential oils (EOs), solid-phase microextraction (SPME) and SPME of n-hexane extracts from the flower and stem-leaf of Filipendula vulgaris (F. vulgaris) were analyzed by GC-FID/MS. A total of 107 constituents were characterized, flower and stem leaf parts of the plant were found to contain different volatile organic compounds. Tricosane (29.6%), n-nonanal (20.5%) were identified as the main components in the essential oil of the flower, while phytol (35.2%) was found to be a major constituent in the essential oil of stem-leaf. Benzaldehyde (56.0%) and n-nonanal (31.6%) were the major groups in the SPME of stem-leaf and flower, respectively. The volatiles for the SPME of n-hexane extracts of the flower and stem leaf of F. vulgaris were predominated by aromatic compounds (75.0% and 78.5%) and ketones (18.1% and 10.1%), respectively. On the other hand, a total of terpene compounds was found at the most in the EO of the stem-leaf part of the plant (48.6%). In addition, antimicrobial, tyrosinase inhibition, and nitric oxide scavenging activities of the n-hexane (H), methanol (M), aqueous extracts (A) and EOs of F. vulgaris were investigated. EOs and methanol extracts of flower and stem-leaf had high antimicrobial activity against tested various microorganisms. However, n-hexane extracts of the flower and stem-leaf only displayed activity against Mycobacterium smegmatis. Methanol extracts of flower and stem-leaf possessed the best tyrosine inhibition and NO scavenging activity. Karadeniz Technical University Research Fund KTU-BAP-6714
- Published
- 2021
9. Antimicrobial and lipase inhibition of essential oil and solvent extracts of Cota tinctoria var. tinctoria and characterization of the essential oil.
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ERİK, İshak, BOZDAL, Gözde, SENER, Sıla Özlem, KORKMAZ, Büşra, KARAOĞLU, Şengül Alpay, TERZIOĞLU, Salih, and YAYLI, Nurettin
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ESSENTIAL oils ,LIPASES ,VOLATILE organic compounds ,MYCOBACTERIUM smegmatis ,SOLVENTS ,BACILLUS cereus ,ACETONITRILE - Abstract
The essential oil (EO) of Cota tinctoria var. tinctoria was analyzed using GC-FID / MS. A total of 51 compounds were determined from this taxon, accounting for 99.79% in hydrodistillation. Monoterpenes were the primary chemical class for the volatile organic compounds in the EO (36.1%, 13 compounds). Borneol (18.1%), camphor (14.9%), and ß-pinene (11.3%) were the major components in the EO of C. tinctoria var. tinctoria. The antimicrobial activities of EO and n-hexane, acetonitrile, methanol, and water solvent extracts of the taxon were screened in vitro against ten microorganisms. The EO yielded the best activity (15 mm, 372.5 MIC, 59600 µg/µL) against Mycobacterium smegmatis. The acetonitrile extract was the most active against the Staphylococcus aureus and Bacillus cereus with 274 µg/mL MIC value. IC50 values for the lipase enzyme inhibitory activity of EO and solvent extracts (n-hexane, acetonitrile, methanol, and water) were found to be 59.80 ± 4.3285 µg/mL 68.28 ± 3.1215 µg/mL, 52.60 ± 3.7526 µg/mL, 48.73 ± 2.8265 µg/mL, and 99.50 ± 5.5678 µg/mL, respectively. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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10. Biological Activity and Phytochemical Analysis of Dicranum scoparium against the Bacterial Disease for Honey Bee.
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Alpay Karaoğlu, Şengül, Yayli, Nurettin, Erik, İshak, Korkmaz, Büşra, Akpinar, Rahşan, Bozdeveci, Arif, Suyabatmaz, Şeyma, Batan, Nevzat, Yeşilyurt, Aydın, Kaya, Selma, Nisbet, Cevat, and Güler, Ahmet
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- 2022
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11. Anti-inflammatory secondary metabolites from Scrophularia kotschyana.
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Renda, Gülin, Kadıoğlu, Mine, Kılıç, Merve, Korkmaz, Büşra, and Kırmızıbekmez, Hasan
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METABOLITES ,APIGENIN ,SOLVENT extraction ,ETHYL acetate ,FLAVONOID glycosides ,LUTEOLIN - Abstract
The species belonging to Scrophularia genus grow mainly in Irano-Turanian and Mediterranean regions and have been used as folk remedy for inflammatory-related diseases since ancient times. The present study was aimed to evaluate the anti-inflammatory activity of the extracts of Scrophularia kotschyana as well as the isolated compounds. The aerial parts and the roots of the plant were separately extracted with methanol. Anti-inflammatory activities of both extracts were evaluated with formalin test in mice. As the methanolic extract of the aerial parts significantly (p <.05) inhibited inflammation, it was then submitted to successive solvent extractions with n -hexane, dichloromethane, ethyl acetate and n -butanol to yield subextracts. Anti-inflammatory activities of the subextracts were evaluated within the same test system. Among the subextracts tested, the n -butanol subextract produced a significant (p <.05) anti-inflammatory activity at all doses (5, 10, and 30 mg/kg, ip.). Sequential chromatographic separation of the n -butanol subextract yielded 8-O-acetyl-4
′ - O -(E)- p -coumaroylharpagide, 8- O -acetyl-4′ - O -(Z)- p -coumaroylharpagide, β-sitosterol 3- O -β-glucopyranoside, apigenin 7- O -β-glucopyranoside, apigenin 7- O -rutinoside, luteolin 7- O -β-glucopyranoside and luteolin 7- O -rutinoside. The anti-inflammatory activities of the isolates were evaluated at 5 mg/kg dose. Luteolin 7- O -β-glucopyranoside and apigenin 7- O -rutinoside caused a significant (p <.05) inhibition of oedema formation. [ABSTRACT FROM AUTHOR]- Published
- 2021
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12. Volatile constituents and antimicrobial activity of Vinca major L. subsp. hirsuta (Boiss) stearn grown in Turkey.
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ERIK, Ishak, KILIC, Gözde, KORKMAZ, Büşra, FANDAKLI, Seda, ALPAY KARAOGLU, Şengül, and YAYLI, Nurettin
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MYCOBACTERIUM smegmatis ,MYCOBACTERIUM tuberculosis ,ENTEROCOCCUS faecalis ,ESSENTIAL oils ,MONOTERPENES ,CANDIDA albicans ,SACCHAROMYCES cerevisiae ,HEXANE - Abstract
In this study, volatile compounds (VCs) in the essential oil (EO), SPME and SPME of n-hexane extract of Vinca major subsp. hirsuta (Boiss.) Stearn were analyzed by GC-FID/MS instrument. A total of 32, 38, and 26 compounds with in the 98.5%, 98.6%, and 98.6% were identified, respectively. As a result of VCs study, (Z)-3-hexenol (36.8%) in the EO, 1,3,5-trimethylbenzene (31,5%) in the SPME, and phenylethyl alcohol (32.8 %) in the SPME of n-hexane extract of V. major subsp. hirsuta were found to be major compounds. Sesquiterpenes (20.6%, and 11.5%) for the HD and SPME, monoterpenes (18.6%) for the SPME of n-hexane extract of V. major subsp. hirsuta were found as the main groups among the terpenic compounds, respectively. Then, the antimicrobial activity of the EO and the solvent extracts (n-hexane, acetonitrile, methanol, and water) of V. major subs. hirsuta against 3 gram negative, 3 gram positive, 1 tuberculosis and 2 fungus were screened. The EO showed the only activity against the Mycobacterium smegmatis ATCC607 (MIC, 152 µg/mL) and Candida albicans ATCC60193 (MIC, 38 µg/mL). The n-hexane extract did not show any activity against all tested microorganisms. The best antimicrobial activity for the acetonitrile, methanol, and water extracts were observed against M. smegmatis with 69 µg/mL, 609 µg/mL, and 437 µg/mL MIC values, respectively. None of the extracts were found to be active to Enterococcus faecalis ATCC29212, Staphylococcus aureus ATCC25923, and Saccharomyces cerevisiae RSKK 251. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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13. The Volatile Chemical Compositions of the Essential Oil/SPME and Enzyme Inhibitory and Radical Scavenging Activities of Solvent Extracts and the Essential oils from Coronilla orientalis Miller and C. varia L. grows in Turkey.
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Renda, Gülin, Özel, Arzu, Barut, Burak, Korkmaz, Büşra, and Yayli, Nurettin
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ESSENTIAL oils ,GLUCOSIDASES ,PHENOL oxidase ,VOLATILE organic compounds ,ENZYMES ,ETHYL acetate ,EXTRACTS - Abstract
The volatile organic compounds (VOCs) of two Coronilla species (Coronilla orientalis Miller and Coronilla varia L.) obtained by hydrodistillation (HD) and solid phase microextraction (SPME) techniques were identified by GC-FID/MS. The major compounds identified in the SPME extracts were limonene (43.4%) in Coronilla orientalis (C. orientalis), (Z)-ß-ocimene and (E)-ß-ocimene (34.3% and 32.4%) in Coronilla varia (C. varia), whereas, the essential oils of C. orientalis and C. varia were rich with γ-terpinene (22.4%) and phytol (30.7%), respectively. In addition, acetylcholinesterase (AChE), butyrylcholinesterase (BuChE), tyrosinase, α-glucosidase enzyme inhibitory, and radical scavenging activities (DPPH) of chloroform, ethyl acetate, methanol, and water extracts, and also essential oils obtained from C. orientalis and C. varia were investigated. The tyrosinase activity was studied at the doses of 25 µg/mL, 50 µg/mL and 100 µg/mL. Tyrosinase inhibition percentage was observed to increase by dose and methanol extracts of the both species were found to have the highest activity. Essential oils of the both species were found to have significant acetylcholinesterase and butyrylcholinesterase inhibition activities. a-Glucosidase enzyme inhibition of the ethyl acetate and water extracts of C. orientalis was determined as 80.11 ± 4.07% and 80.32 ± 3.47% at the 100 µg/mL concentration, respectively. Essential oils, chloroform, ethyl acetate, methanol, and water extracts were determined to have moderate DPPH radical scavenging activities. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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14. Comparison of phenolic profiles and antioxidant activity of three Ornithogalum L. species.
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Renda, Gülin, Özel, Arzu, Akyüz Turumtay, Emine, Barut, Burak, Korkmaz, Büşra, Çol Ayvaz, Melek, and Demir, Adem
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PLANT phenols ,PHENOLIC acids ,PHENOLS ,OXIDANT status ,ANTIOXIDANTS ,TRADITIONAL medicine ,SPECIES - Abstract
Copyright of Turkish Journal of Biochemistry / Turk Biyokimya Dergisi is the property of De Gruyter and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2019
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15. Evaluation of in vivo analgesic activity of Scrophularia kotscyhana and isolation of bioactive compounds through activity-guided fractionation.
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Renda, Gülin, Korkmaz, Büşra, Kılıç, Merve, Duman, Mine Kadıoğlu, and Kırmızıbekmez, Hasan
- Abstract
The present study was undertaken to evaluate the in vivo analgesic activities of the extracts prepared from the aerial parts and roots of Scrophularia kotscyhana and to isolate the bioactive metabolites from the most active extract. Analgesic activities of all extracts and subextracts at the doses of 5, 10 and 30 mg/kg (i.p.) were examined using hot plate test in mice. Among the tested extracts, MeOH extract prepared from the aerial parts and the n-butanol subextract prepared thereof displayed the best analgesic activity at all doses. Phytochemical studies on n-butanol subextract led to the isolation of two new iridoid glycosides as an inseparable mixture, 8-O-acetyl-4′-O-(E)-(p-coumaroyl)-harpagide (1) and 8-O-acetyl-4′-O-(Z)-(p-coumaroyl)-harpagide (2) along with five known secondary metabolites, β-sitosterol 3-O-β-glucopyranoside (3), apigenin 7-O-β-glucopyranoside (4), apigenin 7-O-rutinoside (5), luteolin 7-O-β-glucopyranoside (6) and luteolin 7-O-rutinoside (7). The iridoid mixture (1 and 2), 3 and 4 elicited significant inhibition of pain at 5 mg/kg dose. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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16. In Vitro Protection by Crataegus microphylla Extracts Against Oxidative Damage and Enzyme Inhibition Effects.
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RENDA, Gülin, ÖZEL, Arzu, BARUT, Burak, KORKMAZ, Büşra, and YAYLI, Nurettin
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TRADITIONAL medicine ,ENZYMES ,ACETYLCHOLINESTERASE ,PHENOL oxidase ,OXIDATIVE stress ,DNA damage - Abstract
Copyright of Turkish Journal of Pharmaceutical Sciences is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2018
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17. Volatile and Phenolic Contents, Antimicrobial and Tyrosinase activities of Two Endemic Species Scorzonera pisidica and Scorzonera sandrasica L. Grown in Turkey.
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Yaylı, Nurettin, Öksüz, Enes, Korkmaz, Büşra, Erik, Ishak, Fandaklı, Seda, Faiz, Özlem, and Coşkunçelebi, Kamil
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PHENOL oxidase , *ESSENTIAL oils , *VOLATILE organic compounds , *GALLIC acid , *AROMATIC compounds , *ALDEHYDES - Abstract
Phytochemical analysis of two endemic Scorzonera pisidica Hub.-Mor. and Scorzonera sandrasica Hartvig & Strid species have not been mentioned before. In this work, volatile organic compounds, phenolic contents, antimicrobial, and tyrosinase inhibition activities of two endemic S. pisidica and S. sandrasica grown in Turkey were investigated. Aldehydes were the primary chemical class for the volatile organic compounds in the essential oils (EOs, 49.5%, and 44.9%) and SPME (85.8% and 56.9%) of S. pisidica and S. sandrasica, and aromatic compounds were the main class for the SPME of the n-hexane extracts of S. pisidica (86.9%) and S. sandrasica (86.3%), respectively. The phenolic constituent analysis for the methanol extract of S. pisidica and S. sandrasica gave gallic acid (6.33 mg/g and 2.63 mg/g) as the primary compound. The antimicrobial activity of the EOs and solvent extract (methanol and n-hexane) of S. pisidica and S. sandrasica were tested against nine microorganisms. Furthermore, the inhibitory potential for the methanol extract of the S. pisidica and S. sandrasica showed tyrosinase activity, and IC50 values were found as 0.495±0073 µg/mL and 0.699±0.86 µg/mL, respectively. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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18. Chemical Composition and Antimicrobial Activity of the Essential Oils of Five Scrophularia L. Species from Turkey.
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Renda, Gülin, Kalaycı, Yalçın, Korkmaz, Büşra, Karaoglu, Sengül Alpay, and Yaylı, Nurettin
- Subjects
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FIGWORTS , *BIOCHEMISTRY , *ANTI-infective agents , *ESSENTIAL oils , *VOLATILE organic compounds , *GAS chromatography/Mass spectrometry (GC-MS) , *CHEMICAL composition of plants - Abstract
The essential oils of the five Scrophularia species; Scrophularia chrysantha Jaub. et Spach, Scrophularia kotschyana Benth., Scrophularia olympica Boiss., Scrophularia cinerascens Boiss. and Scrophularia zuvandica Grossh. were obtained by hydrodistillation (HD) with a range of 0.10% to 0.16% yield and analazsed by GC-FID/MS. In the meantime, the volatile organic compounds (VOCs) of S. chrysantha, S. kotschyana, S. olympica, S. cinerascens and S. zuvandica were also identified with the technique of SPME GCFID/MS and the phytochemical results were evaluated. The experimental results of this study showed that the major compounds of essential oils which were taken by the hydrodistillation were carvacrol (52.4%), 2-pentadecanone (26.7%), 2-pentadecanone (12.2%), (Z)-2-nonenal (11.2%) and carvacrol (69.1%) respectively. Isovaleraldehyde (37.1%, 27.9%), eucalyptol (13.8%), 2-ethyl furan (14.8%) and 3(Z)-hexenol (91.3%) were respectively found as the main constituents of the five Scrophularia species with SPME method. Also antimicrobial activities of the essential oils of the five Scrophularia species were screened by using agar well diffusion method. It was identified that S. olympica, S.chrysantha, and S. kotschyana, have anti-tuberculosis activity, whereas, the essential oils gained from S. zuvandica and S. cinerascens have anti-fungal activity. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
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19. α-Glucosidase inhibitory effects of polyphenols from Geranium asphodeloides: Inhibition kinetics and mechanistic insights through in vitro and in silico studies.
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Renda, Gülin, Sari, Suat, Barut, Burak, Šoral, Michal, Liptaj, Tibor, Korkmaz, Büşra, Özel, Arzu, Erik, İshak, and Şöhretoğlu, Didem
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GLUCOSIDASES , *POLYPHENOLS , *GERANIUMS , *CHEMICAL kinetics , *PLANT extracts - Abstract
Graphical abstract Highlights • Extracts and compounds from G. asphodeloides proved potent α -glucosidase inhibitors. • 1 showed the strongest α -glucosidase inhibitory effect among the isolated compounds. • 1 was approximately 61 fold more effective than positive control, acarbose. • 2 , 3 and 4 were competitive; 1 and 6 were uncompetitive inhibitors. • Molecular docking studies gave insights into inhibition mechanisms of the compounds. Abstract Some Geranium species have been used to treat diabetes. To evaluate the scientific basis of this ethnopharmacological use, we aimed to isolate potent α -glucosidase inhibitory metabolites of Geranium asphodeloides Burm. through in vitro bioactivity-guided fractionation. All the tested extracts showed high α -glucosidase inhibitory effect compared to acarbose. Among the tested extracts, the ethyl acetate subextract showed the highest activity with an IC 50 value of 0.85 ± 0.01 µM. A hydrolysable tannin, 1,2,4-tri- O -galloyl- β - d -glucopyranose (1), and five flavonoid glycosides, kaempferol-3- O - α -rhamnopyranoside (2), kaempferol-3- O - α -arabinofuranoside (3), quercetin-3- O - β -glucopyranoside (4), quercetin-3- O - α -rhamnopyranoside (5), and quercetin-3- O - α -rhamnofuranoside (6), were isolated from the ethyl acetate subextract. Their structures were identified by 1D- and 2D-NMR experiments. 1 exhibited the highest α-glucosidase inhibitory effect, approximately 61 times more potent than positive control, acarbose, with an IC 50 value of 0.95 ± 0.07 µM. Also, 2 was more potent than acarbose. An enzyme kinetics analysis revealed that compounds 2 , 3 and 4 were competitive, whereas 1 and 6 uncompetitive inhibitors. Molecular docking studies were performed to get insights into inhibition mechanisms of the isolated compounds in the light of the enzyme kinetic studies using various binding sites of the enzyme model. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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20. Bioassay Guided Isolation of Active Compounds from Alchemilla barbatiflora Juz.
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Renda, Gülin, Özel, Arzu, Barut, Burak, Korkmaz, Büşra, Šoral, Michal, Kandemir, Ümmühan, and Liptaj, Tibor
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ACETYLCHOLINESTERASE , *CHOLINESTERASES , *GLUCOSIDASE inhibitors , *ENZYME inhibitors , *PROCYANIDINS - Abstract
The aerial parts of Alchemilla L. species (Rosaceae) are used internally as diuretic, laxative, tonic and externally for wound healing in Turkish folk medicine. Antioxidant effects of the extracts, fractions and isolated compounds from the aerial parts of A. barbatiflora Juz. were investigated with following methods: 1,1-diphenyl-2-picryl-hydrazyl (DPPH), and superoxide radical scavenging (SOD), phosphomolibdenum-reducing antioxidant power (PRAP), ferric-reducing antioxidant power (FRAP) assays. In addition, tyrosinase, α-glucosidase and acetylcholinesterase inhibition activities of samples were analyzed. The methanol extract from the aerial parts of plant was consecutively fractionated into four subextracts; n-hexane, chloroform, and remaining water extracts. Further studies were carried out on the most active water subextract and the fractions obtained from water subextract with column chromatography. Phytochemical studies on active fractions of the water subextract led to the isolation of seven metabolites including catechin (1) and a catechin dimer; procyanidin B3 (2), a flavonol glucuronide; quercetin-3-O-β-D-glucuronic acid (miquelianin) (3) with flavonoid glycosides; quercetin-3-O-β-D-galactoside (hyperoside) (4), quercetin-3-O-β-D-arabinoside (guaiaverin) (5), kaempferol-3-O-β-Dxylopyranoside (6) and kaempferol-3-O-(6"-coumaroyl-β-D-glycoside) (tiliroside) (7). Their structures were elucidated by spectral techniques (1D and 2D NMR). The experimental data verified that procyanidin B3 displayed remarkable enzyme inhibitory activity among the whole isolated compounds. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
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21. Chemical Variation, Antimicrobial, Nitric Oxide Scavenging Activities and Tyrosinase Inhibition of Essential Oils and Solvent Extracts from Filipendula vulgaris Moench Growing in Turkey.
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Fandakli S, Korkmaz B, Faiz Ö, Kiliç G, Erik İ, Terzioğlu S, and Yaylı N
- Abstract
Volatile organic compositions of the essential oils (EOs), solid-phase microextraction (SPME) and SPME of n -hexane extracts from the flower and stem-leaf of Filipendula vulgaris (F. vulgaris) were analyzed by GC-FID/MS. A total of 107 constituents were characterized, flower and stem-leaf parts of the plant were found to contain different volatile organic compounds. Tricosane (29.6%), n -nonanal (20.5%) were identified as the main components in the essential oil of the flower, while phytol (35.2%) was found to be a major constituent in the essential oil of stem-leaf . Benzaldehyde (56.0%) and n -nonanal (31.6%) were the major groups in the SPME of stem-leaf and flower, respectively. The volatiles for the SPME of n -hexane extracts of the flower and stem-leaf of F. vulgaris were predominated by aromatic compounds (75.0% and 78.5%) and ketones (18.1% and 10.1%), respectively. On the other hand, a total of terpene compounds was found at the most in the EO of the stem-leaf part of the plant (48.6%). In addition, antimicrobial, tyrosinase inhibition, and nitric oxide scavenging activities of the n -hexane (H), methanol (M), aqueous extracts (A) and EOs of F. vulgaris were investigated. EOs and methanol extracts of flower and stem-leaf had high antimicrobial activity against tested various microorganisms . However, n -hexane extracts of the flower and stem-leaf only displayed activity against Mycobacterium smegmatis . Methanol extracts of flower and stem-leaf possessed the best tyrosine inhibition and NO scavenging activity.
- Published
- 2021
- Full Text
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