183 results on '"Kodali, Vamsi"'
Search Results
2. Understanding toxicity associated with boron nitride nanotubes: Review of toxicity studies, exposure assessment at manufacturing facilities, and read-across
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Kodali, Vamsi, Roberts, Jenny R., Glassford, Eric, Gill, Ryan, Friend, Sherri, Dunn, Kevin L., and Erdely, Aaron
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- 2022
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3. In vivo and in vitro toxicity of a stainless-steel aerosol generated during thermal spray coating
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Kodali, Vamsi, Afshari, Aliakbar, Meighan, Terence, McKinney, Walter, Mazumder, Md Habibul Hasan, Majumder, Nairrita, Cumpston, Jared L., Leonard, Howard D., Cumpston, James B., Friend, Sherri, Leonard, Stephen S., Erdely, Aaron, Zeidler-Erdely, Patti C., Hussain, Salik, Lee, Eun Gyung, and Antonini, James M.
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- 2022
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4. Redox imbalance in COVID-19 pathophysiology
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Majumder, Nairrita, Deepak, Vishal, Hadique, Sarah, Aesoph, Drake, Velayutham, Murugesan, Ye, Qing, Mazumder, Md Habibul Hasan, Lewis, Sara E., Kodali, Vamsi, Roohollahi, Anthony, Guo, Nancy Lan, Hu, Gangqing, Khramtsov, Valery V., Johnson, Richard J., Wen, Sijin, Kelley, Eric E., and Hussain, Salik
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- 2022
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5. A joint NCBI and EMBL-EBI transcript set for clinical genomics and research
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Morales, Joannella, Pujar, Shashikant, Loveland, Jane E., Astashyn, Alex, Bennett, Ruth, Berry, Andrew, Cox, Eric, Davidson, Claire, Ermolaeva, Olga, Farrell, Catherine M., Fatima, Reham, Gil, Laurent, Goldfarb, Tamara, Gonzalez, Jose M., Haddad, Diana, Hardy, Matthew, Hunt, Toby, Jackson, John, Joardar, Vinita S., Kay, Michael, Kodali, Vamsi K., McGarvey, Kelly M., McMahon, Aoife, Mudge, Jonathan M., Murphy, Daniel N., Murphy, Michael R., Rajput, Bhanu, Rangwala, Sanjida H., Riddick, Lillian D., Thibaud-Nissen, Françoise, Threadgold, Glen, Vatsan, Anjana R., Wallin, Craig, Webb, David, Flicek, Paul, Birney, Ewan, Pruitt, Kim D., Frankish, Adam, Cunningham, Fiona, and Murphy, Terence D.
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- 2022
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6. Absence of lung tumor promotion with reduced tumor size in mice after inhalation of copper welding fumes.
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Zeidler-Erdely, Patti C, Kodali, Vamsi, Falcone, Lauryn M, Mercer, Robert, Leonard, Stephen S, Stefaniak, Aleksandr B, Grose, Lindsay, Salmen, Rebecca, Trainor-DeArmitt, Taylor, Battelli, Lori A, McKinney, Walter, Stone, Samuel, Meighan, Terence G, Betler, Ella, Friend, Sherri, Hobbie, Kristen R, Service, Samantha, Kashon, Michael, Antonini, James M, and Erdely, Aaron
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WELDING fumes , *COPPER , *MILD steel , *LUNG tumors , *LUNG diseases - Abstract
Welding fumes are a Group 1 (carcinogenic to humans) carcinogen as classified by the International Agency for Research on Cancer. The process of welding creates inhalable fumes rich in iron (Fe) that may also contain known carcinogenic metals such as chromium (Cr) and nickel (Ni). Epidemiological evidence has shown that both mild steel (Fe-rich) and stainless steel (Fe-rich + Cr + Ni) welding fume exposure increases lung cancer risk, and experimental animal data support these findings. Copper-nickel (CuNi) welding processes have not been investigated in the context of lung cancer. Cu is intriguing, however, given the role of Cu in carcinogenesis and cancer therapeutics. This study examines the potential for a CuNi fume to induce mechanistic key characteristics of carcinogenesis in vitro and to promote lung tumorigenesis, using a two-stage mouse bioassay, in vivo. Male A/J mice, initiated with 3-methylcholanthrene (MCA; 10 µg/g), were exposed to CuNi fumes or air by whole-body inhalation for 9 weeks (low deposition-LD and high deposition-HD) and then sacrificed at 30 weeks. In BEAS-2B cells, the CuNi fume-induced micronuclei and caused DNA damage as measured by γ-H2AX. The fume exhibited high reactivity and a dose–response in cytotoxicity and oxidative stress. In vivo , MCA/CuNi HD and LD significantly decreased lung tumor size and adenomas. MCA/CuNi HD exposure significantly decreased gross-evaluated tumor number. In summary, the CuNi fume in vitro exhibited characteristics of a carcinogen, but in vivo , the exposure resulted in smaller tumors, fewer adenomas, less hyperplasia severity, and with HD exposure, less overall lung lesions/tumors. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Development of a thermal spray coating aerosol generator and inhalation exposure system
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Afshari, Aliakbar A., McKinney, Walter, Cumpston, Jared L., Leonard, Howard D., Cumpston, James B., Meighan, Terence G., Jackson, Mark, Friend, Sherri, Kodali, Vamsi, Lee, Eun Gyung, and Antonini, James M.
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- 2022
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8. Toxicity evaluation following pulmonary exposure to an as-manufactured dispersed boron nitride nanotube (BNNT) material in vivo
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Xin, Xing, Barger, Mark, Roach, Katherine A., Bowers, Lauren, Stefaniak, Aleksandr B., Kodali, Vamsi, Glassford, Eric, Dunn, Kevin L., Dunn, Kevin H., Wolfarth, Michael, Friend, Sherri, Leonard, Stephen S., Kashon, Michael, Porter, Dale W., Erdely, Aaron, and Roberts, Jenny R.
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- 2020
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9. Histopathology of the broad class of carbon nanotubes and nanofibers used or produced in U.S. facilities in a murine model
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Fraser, Kelly, Hubbs, Ann, Yanamala, Naveena, Mercer, Robert R., Stueckle, Todd A., Jensen, Jake, Eye, Tracy, Battelli, Lori, Clingerman, Sidney, Fluharty, Kara, Dodd, Tiana, Casuccio, Gary, Bunker, Kristin, Lersch, Traci L., Kashon, Michael L., Orandle, Marlene, Dahm, Matthew, Schubauer-Berigan, Mary K., Kodali, Vamsi, and Erdely, Aaron
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- 2021
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10. Modulation of susceptibility to lung bacterial infection by engineered nanomaterials: In vitro and in vivo correspondence based on macrophage phagocytic function
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Thrall, Brian D., Kodali, Vamsi, Skerrett, Shawn, Thomas, Dennis G., Frevert, Charles W., Pounds, Joel G., and Teeguarden, Justin G.
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- 2019
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11. The NCBI Comparative Genome Viewer (CGV) is an interactive visualization tool for the analysis of whole-genome eukaryotic alignments.
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Rangwala, Sanjida H., Rudnev, Dmitry V., Ananiev, Victor V., Oh, Dong-Ha, Asztalos, Andrea, Benica, Barrett, Borodin, Evgeny A., Bouk, Nathan, Evgeniev, Vladislav I., Kodali, Vamsi K., Lotov, Vadim, Mozes, Eyal, Omelchenko, Marina V., Savkina, Sofya, Sukharnikov, Ekaterina, Virothaisakun, Joël, Murphy, Terence D., Pruitt, Kim D., and Schneider, Valerie A.
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DATA visualization ,MULTIPLE comparisons (Statistics) ,CHROMOSOMES ,RESEARCH personnel ,SCIENTIFIC community ,GENOMES - Abstract
We report a new visualization tool for analysis of whole-genome assembly-assembly alignments, the Comparative Genome Viewer (CGV) (https://ncbi.nlm.nih.gov/genome/cgv/). CGV visualizes pairwise same-species and cross-species alignments provided by National Center for Biotechnology Information (NCBI) using assembly alignment algorithms developed by us and others. Researchers can examine large structural differences spanning chromosomes, such as inversions or translocations. Users can also navigate to regions of interest, where they can detect and analyze smaller-scale deletions and rearrangements within specific chromosome or gene regions. RefSeq or user-provided gene annotation is displayed where available. CGV currently provides approximately 800 alignments from over 350 animal, plant, and fungal species. CGV and related NCBI viewers are undergoing active development to further meet needs of the research community in comparative genome visualization. Commonly used genome browsers only show one genome assembly at a time and cannot show comparisons between multiple genomes. This study develops a new visualization tool called the Comparative Genome Viewer (CGV) that aids in the pairwise comparison of whole-genome eukaryotic assembly-assembly alignments. [ABSTRACT FROM AUTHOR]
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- 2024
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12. The pulmonary toxicity of carboxylated or aminated multi-walled carbon nanotubes in mice is determined by the prior purification method
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Taylor-Just, Alexia J., Ihrie, Mark D., Duke, Katherine S., Lee, Ho Young, You, Dorothy J., Hussain, Salik, Kodali, Vamsi K., Ziemann, Christina, Creutzenberg, Otto, Vulpoi, Adriana, Turcu, Flaviu, Potara, Monica, Todea, Milica, van den Brule, Sybille, Lison, Dominique, and Bonner, James C.
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- 2020
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13. Physicochemical characterization and genotoxicity of the broad class of carbon nanotubes and nanofibers used or produced in U.S. facilities
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Fraser, Kelly, Kodali, Vamsi, Yanamala, Naveena, Birch, M. Eileen, Cena, Lorenzo, Casuccio, Gary, Bunker, Kristin, Lersch, Traci L., Evans, Douglas E., Stefaniak, Aleksandr, Hammer, Mary Ann, Kashon, Michael L., Boots, Theresa, Eye, Tracy, Hubczak, John, Friend, Sherri A., Dahm, Matthew, Schubauer-Berigan, Mary K., Siegrist, Katelyn, Lowry, David, Bauer, Alison K., Sargent, Linda M., and Erdely, Aaron
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- 2020
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14. Oxidative stress, DNA methylation, and telomere length changes in peripheral blood mononuclear cells after pulmonary exposure to metal-rich welding nanoparticles
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Shoeb, Mohammad, Kodali, Vamsi K., Farris, Breanne Y., Bishop, Lindsey M., Meighan, Terence G., Salmen, Rebecca, Eye, Tracy, Friend, Sherri, Schwegler-Berry, Diane, Roberts, Jenny R., Zeidler-Erdely, Patti C., Erdely, Aaron, and Antonini, James M.
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- 2017
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15. Inhalation of welding fumes reduced sperm counts and high fat diet reduced testosterone levels; differential effects in Sprague Dawley and Brown Norway rats
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Skovmand, Astrid, Erdely, Aaron, Antonini, James M., Nurkiewicz, Timothy R., Shoeb, Mohammad, Eye, Tracy, Kodali, Vamsi, Loeschner, Katrin, Vidmar, Janja, Agerholm, Jørgen S., Goericke-Pesch, Sandra, Vogel, Ulla, and Hougaard, Karin S.
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- 2020
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16. Initiation of Pulmonary Fibrosis after Silica Inhalation in Rats is linked with Dysfunctional Shelterin Complex and DNA Damage Response
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Shoeb, Mohammad, Mustafa, Gul M., Joseph, Pius, Umbright, Christina, Kodali, Vamsi, Roach, Katherine A., Meighan, Terence, Roberts, Jenny R., Erdely, Aaron, and Antonini, James M.
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- 2019
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17. Lung toxicity, deposition, and clearance of thermal spray coating particles with different metal profiles after inhalation in rats.
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Antonini, James M., Kodali, Vamsi, Meighan, Terence G., McKinney, Walter, Cumpston, Jared L., Leonard, Howard D., Cumpston, James B., Friend, Sherri, Leonard, Stephen S., Andrews, Ronnee, Zeidler-Erdely, Patti C., Erdely, Aaron, Lee, Eun Gyung, and Afshari, Aliakbar A.
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METAL spraying , *LUNGS , *LIQUID metals , *COATING processes , *METALS , *SURFACE coatings , *STAINLESS steel - Abstract
Thermal spray coating is a process in which molten metal is sprayed onto a surface. Little is known about the health effects associated with these aerosols. Sprague-Dawley rats were exposed to aerosols (25 mg/m3 × 4 hr/d × 4 d) generated during thermal spray coating using different consumables [i.e. stainless-steel wire (PMET731), Ni-based wire (PMET885), Zn-based wire (PMET540)]. Control animals received air. Bronchoalveolar lavage was performed at 4 and 30 d post-exposure to assess lung toxicity. The particles were chain-like agglomerates and similar in size (310–378 nm). Inhalation of PMET885 aerosol caused a significant increase in lung injury and inflammation at both time points. Inhalation of PMET540 aerosol caused a slight but significant increase in lung toxicity at 4 but not 30 d. Exposure to PMET731 aerosol had no effect on lung toxicity. Overall, the lung responses were in the order: PMET885≫PMET540 >PMT731. Following a shorter exposure (25 mg/m3 × 4 h/d × 1d), lung burdens of metals from the different aerosols were determined by ICP-AES at 0, 1, 4 and 30 d post-exposure. Zn was cleared from the lungs at the fastest rate with complete clearance by 4 d post-exposure. Ni, Cr, and Mn had similar rates of clearance as nearly half of the deposited metal was cleared by 4 d. A small but significant percentage of each of these metals persisted in the lungs at 30 d. The pulmonary clearance of Fe was difficult to assess because of inherently high levels of Fe in control lungs. [ABSTRACT FROM AUTHOR]
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- 2023
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18. Improved reference genome of Aedes aegypti informs arbovirus vector control
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Matthews, Benjamin J., Dudchenko, Olga, Kingan, Sarah B., Koren, Sergey, Antoshechkin, Igor, Crawford, Jacob E., Glassford, William J., Herre, Margaret, Redmond, Seth N., Rose, Noah H., Weedall, Gareth D., Wu, Yang, Batra, Sanjit S., Brito-Sierra, Carlos A., Buckingham, Steven D., Campbell, Corey L., Chan, Saki, Cox, Eric, Evans, Benjamin R., Fansiri, Thanyalak, Filipović, Igor, Fontaine, Albin, Gloria-Soria, Andrea, Hall, Richard, Joardar, Vinita S., Jones, Andrew K., Kay, Raissa G. G., Kodali, Vamsi K., Lee, Joyce, Lycett, Gareth J., Mitchell, Sara N., Muehling, Jill, Murphy, Michael R., Omer, Arina D., Partridge, Frederick A., Peluso, Paul, Aiden, Aviva Presser, Ramasamy, Vidya, Rašić, Gordana, Roy, Sourav, Saavedra-Rodriguez, Karla, Sharan, Shruti, Sharma, Atashi, Smith, Melissa Laird, Turner, Joe, Weakley, Allison M., Zhao, Zhilei, Akbari, Omar S., Black, IV, William C., Cao, Han, Darby, Alistair C., Hill, Catherine A., Johnston, J. Spencer, Murphy, Terence D., Raikhel, Alexander S., Sattelle, David B., Sharakhov, Igor V., White, Bradley J., Zhao, Li, Aiden, Erez Lieberman, Mann, Richard S., Lambrechts, Louis, Powell, Jeffrey R., Sharakhova, Maria V., Tu, Zhijian, Robertson, Hugh M., McBride, Carolyn S., Hastie, Alex R., Korlach, Jonas, Neafsey, Daniel E., Phillippy, Adam M., and Vosshall, Leslie B.
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- 2018
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19. Effect of Age, High-Fat Diet, and Rat Strain on Serum Biomarkers and Telomere Length and Global DNA Methylation in Peripheral Blood Mononuclear Cells
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Antonini, James M., Kodali, Vamsi, Meighan, Terence G., Roach, Katherine A., Roberts, Jenny R., Salmen, Rebecca, Boyce, Greg R., Zeidler-Erdely, Patti C., Kashon, Michael, Erdely, Aaron, and Shoeb, Mohammad
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- 2019
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20. All that is silver is not toxic: silver ion and particle kinetics reveals the role of silver ion aging and dosimetry on the toxicity of silver nanoparticles
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Smith, Jordan N., Thomas, Dennis G., Jolley, Hadley, Kodali, Vamsi K., Littke, Matthew H., Munusamy, Prabhakaran, Baer, Donald R., Gaffrey, Matthew J., Thrall, Brian D., and Teeguarden, Justin G.
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- 2018
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21. P539: Fostering a common language in clinical genomics: MANE Select as a universal standard to report clinical variants
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Pujar, Shashikant, Loveland, Jane, Astashyn, Alex, Bennett, Ruth, Berry, Andrew, Cox, Eric, Davidson, Claire, Ermolaeva, Olga, Farrell, Catherine, Fatima, Reham, Goldfarb, Tamara, Gonzalez, Jose, Haddad, Diana, Hardy, Matthew, Hunt, Toby, Jackson, John, Joardar, Vinita, Kay, Michael, Kodali, Vamsi, McGarvey, Kelly, Mudge, Jonathan, Murphy, Michael, Rangwala, Sanjida, Thibaud-Nissen, Françoise, Vatsan, Anjana, Craig, Wallin, David, Webb, Frankish, Adam, Cunningham, Fiona, and Murphy, Terence
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- 2023
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22. Mouse genome annotation by the RefSeq project
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McGarvey, Kelly M., Goldfarb, Tamara, Cox, Eric, Farrell, Catherine M., Gupta, Tripti, Joardar, Vinita S., Kodali, Vamsi K., Murphy, Michael R., O’Leary, Nuala A., Pujar, Shashikant, Rajput, Bhanu, Rangwala, Sanjida H., Riddick, Lillian D., Webb, David, Wright, Mathew W., Murphy, Terence D., and Pruitt, Kim D.
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- 2015
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23. MMP-9-Dependent Serum-Borne Bioactivity Caused by Multiwalled Carbon Nanotube Exposure Induces Vascular Dysfunction via the CD36 Scavenger Receptor
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Aragon, Mario, Erdely, Aaron, Bishop, Lindsey, Salmen, Rebecca, Weaver, John, Liu, Jim, Hall, Pamela, Eye, Tracy, Kodali, Vamsi, Zeidler-Erdely, Patti, Stafflinger, Jillian E., Ottens, Andrew K., and Campen, Matthew J.
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- 2016
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24. Aerosol physicochemical determinants of carbon black and ozone inhalation co-exposure induced pulmonary toxicity.
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Majumder, Nairrita, Kodali, Vamsi, Velayutham, Murugesan, Goldsmith, Travis, Amedro, Jessica, Khramtsov, Valery V, Erdely, Aaron, Nurkiewicz, Timothy R, Harkema, Jack R, Kelley, Eric E, and Hussain, Salik
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CARBON-black , *MICROBIOLOGICAL aerosols , *TRANSFORMING growth factors-beta , *THYMIC stromal lymphopoietin , *OZONE , *AEROSOLS , *AIR pollution - Abstract
Air pollution accounts for more than 7 million premature deaths worldwide. Using ultrafine carbon black (CB) and ozone (O3) as a model for an environmental co-exposure scenario, the dose response relationships in acute pulmonary injury and inflammation were determined by generating, characterizing, and comparing stable concentrations of CB aerosols (2.5, 5.0, 10.0 mg/m3), O3 (0.5, 1.0, 2.0 ppm) with mixture CB + O3 (2.5 + 0.5, 5.0 + 1.0, 10.0 + 2.0). C57BL6 male mice were exposed for 3 h by whole body inhalation and acute toxicity determined after 24 h. CB itself did not cause any alteration, however, a dose response in pulmonary injury/inflammation was observed with O3 and CB + O3. This increase in response with mixtures was not dependent on the uptake but was due to enhanced reactivity of the particles. Benchmark dose modeling showed several-fold increase in potency with CB + O3 compared with CB or O3 alone. Principal component analysis provided insight into response relationships between various doses and treatments. There was a significant correlation in lung responses with charge-based size distribution, total/alveolar deposition, oxidant generation, and antioxidant depletion potential. Lung tissue gene/protein response demonstrated distinct patterns that are better predicted by either particle dose/aerosol responses (interleukin-1β, keratinocyte chemoattractant, transforming growth factor beta) or particle reactivity (thymic stromal lymphopoietin, interleukin-13, interleukin-6). Hierarchical clustering showed a distinct signature with high dose and a similarity in mRNA expression pattern of low and medium doses of CB + O3. In conclusion, we demonstrate that the biological outcomes from CB + O3 co-exposure are significantly greater than individual exposures over a range of aerosol concentrations and aerosol characteristics can predict biological outcome. [ABSTRACT FROM AUTHOR]
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- 2023
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25. Influence of Impurities from Manufacturing Process on the Toxicity Profile of Boron Nitride Nanotubes.
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Kodali, Vamsi, Keun Su Kim, Roberts, Jenny R., Bowers, Lauren, Wolfarth, Michael G., Hubczak, John, Xing Xin, Eye, Tracy, Friend, Sherri, Stefaniak, Aleksandr B., Leonard, Stephen S., Jakubinek, Michael, and Erdely, Aaron
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- 2022
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26. Population genomics of the critically endangered kākāpō
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Dussex, Nicolas, van der Valk, Tom, Morales, Hernán E., Wheat, Christopher W., Díez-del-Molino, David, von Seth, Johanna, Foster, Yasmin, Kutschera, Verena E., Guschanski, Katerina, Rhie, Arang, Phillippy, Adam M., Korlach, Jonas, Howe, Kerstin, Chow, William, Pelan, Sarah, Mendes Damas, Joanna D., Lewin, Harris A., Hastie, Alex R., Formenti, Giulio, Fedrigo, Olivier, Guhlin, Joseph, Harrop, Thomas W.R., Le Lec, Marissa F., Dearden, Peter K., Haggerty, Leanne, Martin, Fergal J., Kodali, Vamsi, Thibaud-Nissen, Françoise, Iorns, David, Knapp, Michael, Gemmell, Neil J., Robertson, Fiona, Moorhouse, Ron, Digby, Andrew, Eason, Daryl, Vercoe, Deidre, Howard, Jason, Jarvis, Erich D., Robertson, Bruce C., and Dalén, Love
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- 2021
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27. Antioxidants Complement the Requirement for Protein Chaperone Function to Maintain β-Cell Function and Glucose Homeostasis
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Han, Jaeseok, Song, Benbo, Kim, Jiun, Kodali, Vamsi K., Pottekat, Anita, Wang, Miao, Hassler, Justin, Wang, Shiyu, Pennathur, Subramaniam, Back, Sung Hoon, Katze, Michael G., and Kaufman, Randal J.
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- 2015
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28. Celastrol induces unfolded protein response-dependent cell death in head and neck cancer
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Fribley, Andrew M., Miller, Justin R., Brownell, Amy L., Garshott, Danielle M., Zeng, Qinghua, Reist, Tyler E., Narula, Neha, Cai, Peter, Xi, Yue, Callaghan, Michael U., Kodali, Vamsi, and Kaufman, Randal J.
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- 2015
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29. The dynamic disulphide relay of quiescin sulphydryl oxidase
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Alon, Assaf, Grossman, Iris, Gat, Yair, Kodali, Vamsi K., DiMaio, Frank, Mehlman, Tevie, Haran, Gilad, Baker, David, Thorpe, Colin, and Fass, Deborah
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Tumors -- Development and progression -- Research ,Oxidases -- Physiological aspects -- Research ,Cysteine -- Physiological aspects -- Research ,Environmental issues ,Science and technology ,Zoology and wildlife conservation - Abstract
Protein stability, assembly, localization and regulation often depend on the formation of disulphide crosslinks between cysteine side chains. Enzymes known as sulphydryl oxidases catalyse de novo disulphide formation and initiate [...]
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- 2012
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30. Quantitative Site-Specific Profiling of S-Glutathionylation in Macrophages in Response to Oxidative Stress Induced by Engineered Nanoparticles: 249
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Duan, Jicheng, Kodali, Vamsi K, Gaffrey, Matthew J, Chu, Rosalie K, Moore, Ronald J, Smith, Richard D, Thrall, Brian D, and Qian, Weijun
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- 2014
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31. Welding fume inhalation exposure and high-fat diet change lipid homeostasis in rat liver
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Boyce, Greg R., Shoeb, Mohammad, Kodali, Vamsi, Meighan, Terence G., Roach, Katherine A., McKinney, Walter, Stone, Samuel, Powell, Matthew J., Roberts, Jenny R., Zeidler-Erdely, Patti C., Erdely, Aaron, and Antonini, James M.
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- 2020
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32. Lung toxicity profile of inhaled copper-nickel welding fume in A/J mice.
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Zeidler-Erdely, Patti C., Erdely, Aaron, Kodali, Vamsi, Andrews, Ronnee, Antonini, James, Trainor-DeArmitt, Taylor, Salmen, Rebecca, Battelli, Lori, Grose, Lindsay, Kashon, Michael, Service, Samantha, McKinney, Walter, Stone, Samuel, and Falcone, Lauryn
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LUNGS ,WELDING fumes ,MICE ,STAINLESS steel welding ,GAS metal arc welding ,WEIGHT loss ,HEAVY metals - Abstract
Objective: Stainless steel welding creates fumes rich in carcinogenic metals such as chromium (Cr). Welding consumables devoid of Cr are being produced in an attempt to limit worker exposures to toxic and carcinogenic metals. The study objective was to characterize a copper-nickel (Cu-Ni) fume generated using gas metal arc welding (GMAW) and determine the pulmonary deposition and toxicity of the fume in mice exposed by inhalation. Materials and Methods: Male A/J mice (6–8 weeks of age) were exposed to air or Cu-Ni welding fumes for 2 (low deposition) or 4 (high deposition) hours/day for 10 days. Mice were sacrificed, and bronchoalveolar lavage (BAL), macrophage function, and histopathological analyses were performed at different timepoints post-exposure to evaluate resolution. Results and Discussion: Characterization of the fume indicated that most of the particles were between 0.1 and 1 µm in diameter, with a mass median aerodynamic diameter of 0.43 µm. Metal content of the fume was Cu (∼76%) and Ni (∼12%). Post-exposure, BAL macrophages had a reduced ability to phagocytose E. coli, and lung cytotoxicity was evident and significant (>12%–19% fold change). Loss of body weight was also significant at the early timepoints. Lung inflammation, the predominant finding identified by histopathology, was observed as a subacute response early that progressively resolved by 28 days with only macrophage aggregates remaining late (84 days). Conclusions: Overall, there was high acute lung toxicity with a resolution of the response in mice which suggests that the Cu-Ni fume may not be ideal for reducing toxic and inflammatory lung effects. [ABSTRACT FROM AUTHOR]
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- 2022
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33. Bioactivity of Circulatory Factors After Pulmonary Exposure to Mild or Stainless Steel Welding Fumes.
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Kodali, Vamsi, Shoeb, Mohammad, Meighan, Terence G, Eye, Tracy, Friend, Sherri A, Hubczak, John, Kashon, Michael L, Zeidler-Erdely, Patti C, Antonini, James M, and Erdely, Aaron
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STAINLESS steel welding , *WELDING fumes , *GAS metal arc welding , *MILD steel , *STAINLESS steel , *SPRAGUE Dawley rats , *ELECTRIC welding - Abstract
Studies suggest that alterations in circulating factors are a driver of pulmonary-induced cardiovascular dysfunction. To evaluate, if circulating factors effect endothelial function after a pulmonary exposure to welding fumes, an exposure known to induce cardiovascular dysfunction, serum collected from Sprague Dawley rats 24 h after an intratracheal instillation exposure to 2 mg/rat of 2 compositionally distinct metal-rich welding fume particulates (manual metal arc welding using stainless steel electrodes [MMA-SS] or gas metal arc welding using mild steel electrodes [GMA-MS]) or saline was used to test molecular and functional effects of in vitro cultures of primary cardiac microvascular endothelial cells (PCMEs) or ex vivo organ cultures. The welding fumes elicited significant pulmonary injury and inflammation with only minor changes in measured serum antioxidant and cytokine levels. PCME cells were challenged for 4 h with serum collected from exposed rats, and 84 genes related to endothelial function were analyzed. Changes in relative mRNA patterns indicated that serum from rats exposed to MMA-SS, and not GMA-MS or PBS, could influence several functional aspects related to endothelial cells, including cell migration, angiogenesis, inflammation, and vascular function. The predictions were confirmed using a functional in vitro assay (scratch assay) as well as an ex vivo multicellular environment (aortic ring angiogenesis assay), validating the concept that endothelial cells can be used as an effective screening tool of exposed workers for determining bioactivity of altered circulatory factors. Overall, the results indicate that pulmonary MMA-SS fume exposure can cause altered endothelial function systemically via altered circulating factors. [ABSTRACT FROM AUTHOR]
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- 2020
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34. Using liquid chromatography mass spectrometry (LC-MS) to assess the effect of age, high-fat diet, and rat strain on the liver metabolome.
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Boyce, Greg, Shoeb, Mohammad, Kodali, Vamsi, Meighan, Terence, Roberts, Jenny R., Erdely, Aaron, Kashon, Michael, and Antonini, James M.
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HIGH-fat diet ,MASS spectrometry ,LIQUID chromatography ,RATTUS norvegicus ,PRINCIPAL components analysis - Abstract
The goal of this study was to use liquid chromatography mass spectrometry to assess metabolic changes of two different diets in three distinct rat strains. Sprague-Dawley, Fischer 344, and Brown-Norway male rats were maintained on a high-fat, or regular diet for 24 weeks. Liver tissue was collected at 4, 12, and 24 weeks to assess global small molecule metabolite changes using high resolution accurate mass spectrometry coupled to ultra-high-performance liquid chromatography. The results of the global metabolomics analysis revealed significant changes based on both age and diet within all three strains. Principal component analysis revealed that the influence of diet caused a greater variation in significantly changing metabolites than that of age for the Brown Norway and Fisher 344 strains, whereas diet had the greatest influence in the Sprague Dawley strain only at the 4-week time point. As expected, metabolites involved in lipid metabolism were changed in the animals maintained on a high fat diet compared to the regular diet. There were also significant changes observed in the concentration of Tri carboxylic acid cycle intermediates that were extracted from the liver of all three strains based on diet. The results of this study showed that a high fat diet caused significant liver and metabolic changes compared to a regular diet in multiple rat strains. The inbred Fisher 344 and Brown Norway rats were more metabolically sensitive to the diet changes than outbred Sprague Dawley strain. The study also showed that age, as was the case for Sprague Dawley, is an important variable to consider when assessing metabolic changes. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
35. Association of occupational exposures with ex vivo functional immune response in workers handling carbon nanotubes and nanofibers.
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Schubauer-Berigan, Mary K., Dahm, Matthew M., Toennis, Christine A., Sammons, Deborah L., Eye, Tracy, Kodali, Vamsi, Zeidler-Erdely, Patti C., and Erdely, Aaron
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CARBON nanotubes ,IMMUNE response ,MULTIWALLED carbon nanotubes ,EMPLOYEES ,CROSS-sectional method - Abstract
The objective of this study was to evaluate the association between carbon nanotube and nanofiber (CNT/F) exposure and ex vivo responses of whole blood challenged with secondary stimulants, adjusting for potential confounders, in a cross-sectional study of 102 workers. Multi-day exposure was measured by CNT/F structure count (SC) and elemental carbon (EC) air concentrations. Demographic, lifestyle and other occupational covariate data were obtained via questionnaire. Whole blood collected from each participant was incubated for 18 hours with and without two microbial stimulants (lipopolysaccharide/LPS and staphylococcal enterotoxin type B/SEB) using TruCulture technology to evaluate immune cell activity. Following incubation, supernatants were preserved and analyzed for protein concentrations. The stimulant:null response ratio for each individual protein was analyzed using multiple linear regression, followed by principal component (PC) analysis to determine whether patterns of protein response were related to CNT/F exposure. Adjusting for confounders, CNT/F metrics (most strongly, the SC-based) were significantly (p < 0.05) inversely associated with stimulant:null ratios of several individual biomarkers: GM-CSF, IFN-γ, interleukin (IL)-2, IL-4, IL-5, IL-10, IL-17, and IL-23. CNT/F metrics were significantly inversely associated with PC1 (a weighted mean of most biomarkers, explaining 25% of the variance in the protein ratios) and PC2 (a biomarker contrast, explaining 14%). Among other occupational exposures, only solvent exposure was significant (inversely related to PC2). CNT/F exposure metrics were uniquely related to stimulant responses in challenged whole blood, illustrating reduced responsiveness to a secondary stimulus. This approach, if replicated in other exposed populations, may present a relatively sensitive method to evaluate human response to CNT/F or other occupational exposures. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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36. Effect of a High-Fat Diet and Occupational Exposure in Different Rat Strains on Lung and Systemic Responses: Examination of the Exposome in an Animal Model.
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Antonini, James M, Kodali, Vamsi, Shoeb, Mohammad, Kashon, Michael, Roach, Katherine A, Boyce, Gregory, Meighan, Terence, Stone, Samuel, McKinney, Walter, Boots, Theresa, Roberts, Jenny R, Zeidler-Erdely, Patti C, and Erdely, Aaron
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HIGH-fat diet , *ENVIRONMENTAL exposure , *STAINLESS steel welding , *WELDING fumes , *ANIMAL models in research - Abstract
The exposome is the measure of all exposures of an individual in a lifetime and how those exposures relate to health. The goal was to examine an experimental model integrating multiple aspects of the exposome by collecting biological samples during critical life stages of an exposed animal that are applicable to worker populations. Genetic contributions were assessed using strains of male rats with different genetic backgrounds (Fischer-344, Sprague Dawley, and Brown-Norway) maintained on a regular or high-fat diet for 24 weeks. At week 7 during diet maintenance, groups of rats from each strain were exposed to stainless steel welding fume (WF; 20 mg/m3 × 3 h/d × 4 days/week × 5 weeks) or air until week 12, at which time some animals were euthanized. A separate set of rats from each strain were allowed to recover from WF exposure until the end of the 24-week period. Bronchoalveolar lavage fluid and serum were collected at 7, 12, and 24 weeks to assess general health indices. Depending on animal strain, WF exposure and high-fat diet together worsened kidney toxicity as well as altered different serum enzymes and proteins. Diet had minimal interaction with WF exposure for pulmonary toxicity endpoints. Experimental factors of diet, exposure, and strain were all important, depending on the health outcome measured. Exposure had the most significant influence related to pulmonary responses. Strain was the most significant contributor regarding the other health indices examined, indicating that genetic differences possibly drive the exposome effect in each strain. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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37. Quiescin sulfhydryl oxidase from Trypanosoma brucei: catalytic activity and mechanism of a QSOX family member with a single thioredoxin domain
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Kodali, Vamsi K. and Thorpe, Colin
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Hydrogen peroxide -- Chemical properties ,Oxidases -- Chemical properties ,Protein folding -- Analysis ,Thioredoxin -- Structure ,Thioredoxin -- Chemical properties ,Trypanosoma brucei -- Physiological aspects ,Trypanosoma brucei -- Genetic aspects ,Biological sciences ,Chemistry - Abstract
The first enzymatic characterization of single-thioredoxin (Trx) quiescin sulfhydryl oxidase (QSOX) flavoenzymes from vertebrates which catalyzes the direct, facile, insertion of disulfide bonds into reduced unfolded proteins with the reduction of oxygen to hydrogen peroxide is reported. The single-Trx domain QSOX is observed to show remarkable similarity in enzymatic behavior to its double-Trx metazoan couterparts.
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- 2010
38. Toxicity of Airborne Metals
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Kodali, Vamsi K., Erdely, Aaron, and Zeidler-Erdely, Patti C.
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- 2015
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39. Grouping of carbonaceous nanomaterials based on association of patterns of inflammatory markers in BAL fluid with adverse outcomes in lungs.
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Yanamala, Naveena, Desai, Ishika C., Miller, William, Kodali, Vamsi K., Syamlal, Girija, Roberts, Jenny R., and Erdely, Aaron D.
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NANOSTRUCTURED materials ,LUNGS ,CARBON-black ,CARBON nanotubes ,FLUIDS ,CARBONACEOUS aerosols - Abstract
Carbonaceous nanomaterials (CNMs) are universally being used to make commodities, as they present unique opportunities for development and innovation in the fields of engineering, biotechnology, etc. As technology advances to incorporate CNMs in industry, the potential exposures associated with these particles also increase. CNMs have been found to be associated with substantial pulmonary toxicity, including inflammation, fibrosis, and/or granuloma formation in animal models. This study attempts to categorize the toxicity profiles of various carbon allotropes, in particular, carbon black, different multi-walled carbon nanotubes, graphene-based materials, and their derivatives. Statistical and machine learning-based approaches were used to identify groups of CNMs with similar pulmonary toxicity responses from a panel of proteins measured in bronchoalveolar lavage (BAL) fluid samples and with similar pathological outcomes in the lungs. Thus, grouped particles, based on their pulmonary toxicity profiles, were used to select a small set of proteins that could potentially identify and discriminate between the toxicity profiles associated within each group. Specifically, MDC/CCL22 and MIP-3β/CCL19 were identified as common protein markers associated with both toxicologically distinct groups of CNMs. In addition, the persistent expression of other selected protein markers in BAL fluid from each group suggested their ability to predict toxicity in the lungs, i.e. fibrosis and microgranuloma formation. The advantages of such approaches can have positive implications for further research in toxicity profiling. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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40. Surface area- and mass-based comparison of fine and ultrafine nickel oxide lung toxicity and augmentation of allergic response in an ovalbumin asthma model.
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Roach, Katherine A., Anderson, Stacey E., Stefaniak, Aleksandr B., Shane, Hillary L., Kodali, Vamsi, Kashon, Michael, and Roberts, Jenny R.
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NICKEL oxides ,IMMUNOGLOBULIN E ,LUNGS ,RESPIRATORY allergy ,SURFACE area ,ASTHMA - Abstract
Background: The correlation of physico-chemical properties with mechanisms of toxicity has been proposed as an approach to predict the toxic potential of the vast number of emerging nanomaterials. Although relationships have been established between properties and the acute pulmonary inflammation induced by nanomaterials, properties' effects on other responses, such as exacerbation of respiratory allergy, have been less frequently explored. Methods: In this study, the role of nickel oxide (NiO) physico-chemical properties in the modulation of ovalbumin (OVA) allergy was examined in a murine model. Results: 181 nm fine (NiO-F) and 42 nm ultrafine (NiO-UF) particles were characterized and incorporated into a time course study where measured markers of pulmonary injury and inflammation were associated with NiO particle surface area. In the OVA model, exposure to NiO, irrespective of any metric was associated with elevated circulating total IgE levels. Serum and lung cytokine levels were similar with respect to NiO surface area. The lower surface area was associated with an enhanced Th2 profile, whereas the higher surface area was associated with a Th1-dominant profile. Surface area-normalized groups also exhibited similar alterations in OVA-specific IgE levels and lung neutrophil number. However, lung eosinophil number and allergen challenge-induced alterations in lung function related more to particle size, wherein NiO-F was associated with an increased enhanced pause response and NiO-UF was associated with increased lung eosinophil burden. Conclusions: Collectively, these findings suggest that although NiO surface area correlates best with acute pulmonary injury and inflammation following respiratory exposure, other physico-chemical properties may contribute to the modulation of immune responses in the lung. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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41. Pulmonary toxicity and lung tumorigenic potential of surrogate metal oxides in gas metal arc welding–stainless steel fume: Iron as a primary mediator versus chromium and nickel.
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Falcone, Lauryn M., Erdely, Aaron, Salmen, Rebecca, Keane, Michael, Battelli, Lori, Kodali, Vamsi, Bowers, Lauren, Stefaniak, Aleksandr B., Kashon, Michael L., Antonini, James M., and Zeidler-Erdely, Patti C.
- Subjects
METALLIC oxides ,GAS metal arc welding ,CHROMIUM ,STAINLESS steel ,LUNG tumors - Abstract
In 2017, the International Agency for Research on Cancer classified welding fumes as “carcinogenic to humans” (Group 1). Both mild steel (MS) welding, where fumes lack carcinogenic chromium and nickel, and stainless steel (SS) increase lung cancer risk in welders; therefore, further research to better understand the toxicity of the individual metals is needed. The objectives were to (1) compare the pulmonary toxicity of chromium (as Cr(III) oxide [Cr
2 O3 ] and Cr (VI) calcium chromate [CaCrO4 ]), nickel [II] oxide (NiO), iron [III] oxide (Fe2 O3 ), and gas metal arc welding-SS (GMAW-SS) fume; and (2) determine if these metal oxides can promote lung tumors. Lung tumor susceptible A/J mice (male, 4–5 weeks old) were exposed by oropharyngeal aspiration to vehicle, GMAW-SS fume (1.7 mg), or a low or high dose of surrogate metal oxides based on the respective weight percent of each metal in the fume: Cr2 O3 + CaCrO4 (366 + 5 μg and 731 + 11 μg), NiO (141 and 281 μg), or Fe2 O3 (1 and 2 mg). Bronchoalveolar lavage, histopathology, and lung/liver qPCR were done at 1, 7, 28, and 84 days post-aspiration. In a two-stage lung carcinogenesis model, mice were initiated with 3-methylcholanthrene (10 μg/g; intraperitoneal; 1x) or corn oil then exposed to metal oxides or vehicle (1 x/week for 5 weeks) by oropharyngeal aspiration. Lung tumors were counted at 30 weeks post-initiation. Results indicate the inflammatory potential of the metal oxides was Fe2 O3 > Cr2 O3 + CaCrO4 > NiO. Overall, the pneumotoxic effects were negligible for NiO, acute but not persistent for Cr2 O3 + CaCrO4 , and persistent for the Fe2 O3 exposures. Fe2 O3 , but not Cr2 O3 + CaCrO4 or NiO significantly promoted lung tumors. These results provide experimental evidence that Fe2 O3 is an important mediator of welding fume toxicity and support epidemiological findings and the IARC classification. [ABSTRACT FROM AUTHOR]- Published
- 2018
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42. Respirable Uranyl-Vanadate-Containing Particulate Matter Derived From a Legacy Uranium Mine Site Exhibits Potentiated Cardiopulmonary Toxicity.
- Author
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Zychowski, Katherine E, Kodali, Vamsi, Harmon, Molly, Tyler, Christina R, Sanchez, Bethany, Suarez, Yoselin Ordonez, Herbert, Guy, Wheeler, Abigail, Avasarala, Sumant, and Cerrato, José M
- Subjects
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URANYL compounds , *VANADATES , *PARTICULATE matter , *TOXICITY testing , *LABORATORY mice - Abstract
Exposure to windblown particulate matter (PM) arising from legacy uranium (U) mine sites in the Navajo Nation may pose a human health hazard due to their potentially high metal content, including U and vanadium (V). To assess the toxic impact of PM derived from Claim 28 (a priority U mine) compared with background PM, and consider the putative role of metal species U and V. Two representative sediment samples from Navajo Nation sites (Background PM and Claim 28 PM) were obtained, characterized in terms of chemistry and morphology, and fractioned to the respirable (< 10 µm) fraction. Mice were dosed with either PM sample, uranyl acetate, or vanadyl sulfate via aspiration (100 µg), with assessments of pulmonary and vascular toxicity 24 h later. Particulate matter samples were also examined for in uitro effects on cytotoxicity, oxidative stress, phagocytosis, and inflammasome induction. Claim 28 PM10 was highly enriched with U and V and exhibited a unique nanoparticle ultrastructure compared with background PM10. Claim 28 PM10 exhibited enhanced pulmonary and vascular toxicity relative to background PM10. Both U and V exhibited complementary pulmonary inflammatory potential, with U driving a classical inflammatory cytokine profile (elevated interleukin [IL]-1β, tumor necrosis factor-α, and keratinocyte chemoattractant/human growth-regulated oncogene) while V preferentially induced a different cytokine pattern (elevated IL-5, IL-6, and IL-10). Claim 28 PM10 was more potent than background PM10 in terms of in uitro cytotoxicity, impairment of phagocytosis, and oxidative stress responses. Resuspended PM10 derived from U mine waste exhibit greater cardiopulmonary toxicity than background dusts. Rigorous exposure assessment is needed to gauge the regional health risks imparted by these unremediated sites. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
43. ISD3: a particokinetic model for predicting the combined effects of particle sedimentation, diffusion and dissolution on cellular dosimetry for in vitro systems.
- Author
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Thomas, Dennis G., Smith, Jordan N., Thrall, Brian D., Baer, Donald R., Jolley, Hadley, Munusamy, Prabhakaran, Kodali, Vamsi, Demokritou, Philip, Cohen, Joel, and Teeguarden, Justin G.
- Subjects
PARTICLE size determination ,CELL culture ,TOXICOLOGICAL chemistry ,SILVER ions ,RADIATION dosimetry - Abstract
Background: The development of particokinetic models describing the delivery of insoluble or poorly soluble nanoparticles to cells in liquid cell culture systems has improved the basis for dose-response analysis, hazard ranking from high-throughput systems, and now allows for translation of exposures across in vitro and in vivo test systems. Complimentary particokinetic models that address processes controlling delivery of both particles and released ions to cells, and the influence of particle size changes from dissolution on particle delivery for cell-culture systems would help advance our understanding of the role of particles and ion dosimetry on cellular toxicology. We developed ISD3, an extension of our previously published model for insoluble particles, by deriving a specific formulation of the Population Balance Equation for soluble particles. Results: ISD3 describes the time, concentration and particle size dependent dissolution of particles, their delivery to cells, and the delivery and uptake of ions to cells in in vitro liquid test systems. We applied the model to calculate the particle and ion dosimetry of nanosilver and silver ions in vitro after calibration of two empirical models, one for particle dissolution and one for ion uptake. Total media ion concentration, particle concentration and total cell-associated silver time-courses were well described by the model, across 2 concentrations of 20 and 110 nm particles. ISD3 was calibrated to dissolution data for 20 nm particles as a function of serum protein concentration, but successfully described the media and cell dosimetry time-course for both particles at all concentrations and time points. We also report the finding that protein content in media affects the initial rate of dissolution and the resulting near-steady state ion concentration in solution for the systems we have studied. Conclusions: By combining experiments and modeling, we were able to quantify the influence of proteins on silver particle solubility, determine the relative amounts of silver ions and particles in exposed cells, and demonstrate the influence of particle size changes resulting from dissolution on particle delivery to cells in culture. ISD3 is modular and can be adapted to new applications by replacing descriptions of dissolution, sedimentation and boundary conditions with those appropriate for particles other than silver. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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44. Sparse Supervised Classification Methods Predict and Characterize Nanomaterial Exposures: Independent Markers of MWCNT Exposures.
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Yanamala, Naveena, Orandle, Marlene S., Kodali, Vamsi K., Bishop, Lindsey, Zeidler-Erdely, Patti C., Roberts, Jenny R., Castranova, Vincent, and Erdely, Aaron
- Subjects
CARBON nanotubes ,FIBROSIS - Abstract
Recent experimental evidence indicates significant pulmonary toxicity of multiwalled carbon nanotubes (MWCNTs), such as inflammation, interstitial fibrosis, granuloma formation, and carcinogenicity. Although numerous studies explored the adverse potential of various CNTs, their comparability is often limited. This is due to differences in administered dose, physicochemical characteristics, exposure methods, and end points monitored. Here, we addressed the problem through sparse classification method, a supervised machine learning approach that can reduce the noise contained in redundant variables for discriminating among MWCNT-exposed and MWCNT-unexposed groups. A panel of proteins measured from bronchoalveolar lavage fluid (BAL) samples was used to predict exposure to various MWCNT and determine markers that are attributable to MWCNT exposure and toxicity in mice. Using sparse support vector machine–based classification technique, we identified a small subset of proteins clearly distinguishing each exposure. Macrophage-derived chemokine (MDC/CCL22), in particular, was associated with various MWCNT exposures and was independent of exposure method employed, that is, oropharyngeal aspiration versus inhalation exposure. Sustained expression of some of the selected protein markers identified also suggests their potential role in MWCNT-induced toxicity and proposes hypotheses for future mechanistic studies. Such approaches can be used more broadly for nanomaterial risk profiling studies to evaluate decisions related to dose/time–response relationships that could delineate experimental variables from exposure markers. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
45. New materials and methods for studying macrophages at interfaces
- Author
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Kodali, Vamsi Krishna
- Subjects
570 Life sciences - Abstract
Macrophages are a key cellular component of the immune system. In the body they act as front line immune defense and are vital chemical factories that respond to their environment by secreting various chemical mediators. A complete understanding of the molecular details of phagocytotic process and macrophages ability to modulate the signaling activity is still lacking. In the present thesis we designed and used novel nano-materials to understand and modulate macrophage behavior. In order to decipher the cell mechanics and signaling occurring during phagocytotic uptake, we used hollow polyelectrolyte capsules as force sensors. In order to enumerate the forces from the deformations, the capsules were calibrated and a stiffness of 0.11 ± 0.02 nN/nm was found. Using a swept field confocal microscope, we could follow the deformations occurring on the capsule during the phagocytotic uptake. This allowed us for the first time to decipher the mechanics of phagocytosis uptake in its natural state without applying any external mechanical forces or perturbing the cells. It was observed that macrophages during the retraction phase of the uptake, buckled or irreversibly deformed the capsules. From the mechanical characterization, we know that it takes 150 nN to buckle the capsules, this upper limit of the “PhagoSensor” approach is thirty fold higher than the values previously measured by other techniques. To systematically decipher the mechanistic roles of individual molecules in phagocytotic cup formation, we inhibited key signaling molecules PI3-Kinase and SYK, the eccentricity of the deformed capsules was found to be 0.87 ± 0.05 and 0.75 ± 0.05 respectively. This showed that the activation occurs in a sequence. In the second part of the thesis, new implant surfaces were designed for people having a propensity for chronic inflammation. These engineered surfaces can modulate and make macrophages secrete anti-inflammation cytokines. The surfaces comprised of nanopatterned substrates with regular hexagonal spacing of 36, 63, 80 and 125 nm, decorated with Fc fragments. There was a modulation in cell area and cytokine production on the nanopatterns. It was found that the Fc nanopatterns were superior in eliciting anti-inflammation response (TGF-ß & IL-10) than random presentation of Fc fragments. We found that the anti-inflammation effect starts after 24 hrs and at 48 hrs we could see reduced pro-inflammation. Comparing the pro- and anti-inflammatory cytokine production, it was concluded that 36 nm spaced patterns are ideal for eliciting cytokine mediated anti-inflammation signaling. To include both the beneficial effects of polymer surfaces and nanopatterning, a new protein nanopatterning approach for thermochemical nanolithography (TCNL) was developed. This technique can generate high-resolution, multi-protein patterns in arbitrary shapes on polymer substrates. TCNL uses a resistively heated AFM tip to unmask amine groups. We modified the micro and nano patterns generated to include different chemical functionalities and thereby allowing us to bind multiple proteins on the same substrate in different shapes. Several approaches have been developed to immobilize proteins and other biomolecules like DNA onto these templates. These templates are stable and can be stored for later bio-functionalization for at least 4-6 weeks. A strategy to prevent protein adsorption on the surfaces was developed. It was demonstrated that these passivated surfaces reduced the non-specific binding of proteins by approximately 20 times. Finally, the bioactivity of the patterned proteins was demonstrated using an in-vitro protein assay and in-vivo cell assay. Makrophagen sind eine der Schlüsselkomponenten des Immunsystems. Diese Zellen bilden die vorderste Linie der Immunabwehr gegen eindringende Pathogene und dienen als lebenswichtige chemische Fabriken, die auf ihre Umgebung mit der Segregation verschiedener Zytokine und chemischer Mediatoren reagieren. Ein umfassendes Verständnis der molekularen Details des phagozygotischen Prozesses und der Fähigkeit der Makrophagen die Signalaktivität zu modulieren fehlt bis heute. Nanometerstarke, hohle, 4,5 µm große Polyelektrolytkapseln wurden als Kraftsensoren benutzt, um die Mechanik während der Phagozytose zu untersuchen. Um diese Kräfte aus den beobachteten Deformationen zu bestimmen, wurden die Kapseln zuerst kalibriert und mechanisch charakterisiert. Die Steifigkeit der Kapseln war 0,11?0,02 nN/nm. Die Dynamik der Kapseln während der Phagozytose wurde mit Hilfe eines swept-field Konfokalmikroskops verfolgt. Dies erlaubte es uns, erstmalig die Mechanik der phagozytotischen Aufnahme in ihrem natürlichen Zustand ohne das Anwenden externer Kräfte oder anderweitiger Störung der Zellen zu messen. Es konnte beobachtet werden, dass Makrophagen während der Rückzugphase des Aufnahmeprozesses die Kapseln eindellten oder irreversibel zerstören. Aus der mechanischen Charakterisierung ist bekannt, dass ca. 150 nN benötigt werden, um die Kapseln einzudellen. Diese mit dem „Phagosensor“ gemessene Wert ist 30 fach höher als alle zuvor mit anderen Techniken gemessene Werte. Um die mechanistische Rolle individueller Moleküle bei der Bildung des phagozytotischen Cups zu entschlüsseln, wurden die Schlüsselsignalmoleküle PI3-Kinase und SYK inhibiert. Wie erwartet war die Exzentrität der deformierten Kapseln für SYK inaktivierte Zellen 0,87?0,05 und für PI3-Kinase inaktivierte Zellen 0,75?0,05. So konnte gezeigt werden, dass die Aktivierung sequenziell verläuft. Im zweiten Teil dieser Arbeit wurden neue Implantatoberflächen entwickelt für Patienten mit einer Neigung zu chronischen Entzündungen. Diese Oberflächen können Makrophagen modulieren und dazu bringen, anti-inflammatorische Zytokine zu segregieren. Die Oberfläche dieser Substrate war mit nanostrukturierten Fc-Fragmenten in hexagonalen Abständen von 36, 63, 80 und 125 nm dekoriert. Es konnte eine Modulierung der Zellfläche und der Zytokinproduktion auf den Nanostrukturen gezeigt werden. Desweiteren konnte nachgewiesen werden, dass nanostrukturierte Fc-Fragmente eine stärkere anti-inflammatorische Antwort (TGF-ß & IL-10) auslösen als zufällig verteilte. Die anti-inflammatorische Antwort begann nach 24 h und bis zu 48 h konnte eine reduzierte Entzündungsantwort beobachtet werden. Wenn man die pro- und anti-inflammatorische Zytokinproduktion betrachtet, kann gefolgert werden, dass Nanostrukturen mit 36 nm optimal für das Auslösen einer anti-inflammatorischen Antwort sind. Um die Vorteile von Polymeroberflächen und Nanostrukturierung zu verbinden, wurde eine neue Strukturierungsmethode, die sogenannte thermochemische Nanolithographie (TCNL), entwickelt. Diese Technik kann hochaufgelöste multi-Proteinstrukturen in beliebigen Formen auf Polymeroberflächen generieren. TCNL verwendet eine widerstandserhitzte AFM-Spitze, um Aminofunktionen zu entschützen. TCNL ist 106 Mal schneller als Standard-Dip-Pen-Nanolithographie. Die hergestellten Mikro-und Nanostrukturen wurden so verändert, dass verschiedene chemische Funktionalitäten resultierten. Es wurden verschiedene Verfahren entwickelt, um Proteine oder andere Biomoleküle auf diesen Mustern zu immobilisieren. Die Flexibilität dieses Ansatzes wurde durch die Strukturierung mehrerer verschiedener Proteine auf einer Oberfläche in verschiedenen Formen demonstriert. Die mit TCNL hergestellten Oberflächen sind stabil und können für eine spätere Biofunktionalisierung mindestens 4 bis 6 Wochen aufbewahrt werden. Es wurde weiterhin eine Polyethylenglykol-Passivierung entwickelt, für die gezeigt werden konnte, dass unspezifische Proteinadsorption um einen Faktor von 20 reduziert war. Schließlich konnte die Bioaktivität der Proteinstrukturen in in-vitro Expimenten, wie auch in in-vivo Zellexperimenten gezeigt werden.
- Published
- 2010
46. Acute in vitro and in vivo toxicity of a commercial grade boron nitride nanotube mixture.
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Kodali, Vamsi K., Roberts, Jenny R., Shoeb, Mohammad, Wolfarth, Michael G., Bishop, Lindsey, Eye, Tracy, Barger, Mark, Roach, Katherine A., Friend, Sherri, Schwegler-Berry, Diane, Chen, Bean T., Stefaniak, Aleksandr, Jordan, Kevin C., Whitney, Roy R., Porter, Dale W., and Erdely, Aaron D.
- Subjects
- *
BORON nitride , *NANOTUBES , *MULTIWALLED carbon nanotubes , *MONOCYTES , *INTERLEUKIN-18 - Abstract
Boron nitride nanotubes (BNNTs) are an emerging engineered nanomaterial attracting significant attention due to superior electrical, chemical and thermal properties. Currently, the toxicity profile of this material is largely unknown. Commercial grade BNNTs are composed of a mixture (BNNT-M) of ∼50–60% BNNTs, and ∼40–50% impurities of boron and hexagonal boron nitride. We performed acutein vitroandin vivostudies with commercial grade BNNT-M, dispersed by sonication in vehicle, in comparison to the extensively studied multiwalled carbon nanotube-7 (MWCNT-7). THP-1 wild-type and NLRP3-deficient human monocytic cells were exposed to 0–100 µg/ml and C57BL/6 J male mice were treated with 40 µg of BNNT-M forin vitroandin vivostudies, respectively.In vitro, BNNT-M induced a dose-dependent increase in cytotoxicity and oxidative stress. This was confirmedin vivofollowing acute exposure increase in bronchoalveolar lavage levels of lactate dehydrogenase, pulmonary polymorphonuclear cell influx, loss in mitochondrial membrane potential and augmented levels of 4-hydroxynonenal. Uptake of this material caused lysosomal destabilization, pyroptosis and inflammasome activation, corroborated by an increase in cathepsin B, caspase 1, increased protein levels of IL-1β and IL-18 bothin vitroandin vivo. Attenuation of these effects in NLRP3-deficient THP-1 cells confirmed NLRP3-dependent inflammasome activation by BNNT-M. BNNT-M induced a similar profile of inflammatory pulmonary protein production when compared to MWCNT-7. Functionally, pretreatment with BNNT-M caused suppression in bacterial uptake by THP-1 cells, an effect that was mirrored in challenged alveolar macrophages collected from exposed mice and attenuated with NLRP3 deficiency. Analysis of cytokines secreted by LPS-challenged alveolar macrophages collected afterin vivoexposure to dispersions of BNNT-M showed a differential macrophage response. The observed results demonstrated acute inflammation and toxicityin vitroandin vivofollowing exposure to sonicated BNNT-M was in part due to NLRP3 inflammasome activation. [ABSTRACT FROM PUBLISHER]
- Published
- 2017
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47. Evaluation of the molecular mechanisms associated with cytotoxicity and inflammation after pulmonary exposure to different metal-rich welding particles.
- Author
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Shoeb, Mohammad, Kodali, Vamsi, Farris, Breanne, Bishop, Lindsey M., Meighan, Terence, Salmen, Rebecca, Eye, Tracy, Roberts, Jenny R., Zeidler-Erdely, Patti, Erdely, Aaron, and Antonini, James M.
- Subjects
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WELDING , *CELL-mediated cytotoxicity , *LUNG diseases , *ENVIRONMENTAL exposure , *HEME oxygenase - Abstract
Welding generates a complex aerosol of incidental nanoparticles and cytotoxic metals, such as chromium (Cr), manganese (Mn), nickel (Ni), and iron (Fe). The goal was to use bothin vivoandin vitromethodologies to determine the mechanisms by which different welding fumes may damage the lungs. Sprague-Dawley rats were treated by intratracheal instillation (ITI) with 2.0 mg of gas metal arc-mild steel (GMA-MS) or manual metal arc-stainless steel (MMA-SS) fumes or saline (vehicle control). At 1, 3, and 10 days, bronchoalveolar lavage (BAL) was performed to measure lung toxicity. To assess molecular mechanisms of cytotoxicity, RAW264.7 cells were exposed to both welding fumes for 24 h (0–100 μg/ml). Fume composition was different: MMA-SS (41% Fe, 29% Cr, 17% Mn, 3% Ni) versus GMA-MS (85% Fe, 14% Mn). BAL indicators of lung injury and inflammation were increased by MMA-SS at all time points and by GMA-MS at 3 and 10 days after exposure. RAW264.7 cells exposed to MMA-SS had elevated generation of reactive oxygen species (ROS), protein-HNE (P-HNE) adduct formation, activation of ERK1/2, and expression of cyclooxygenase-2 (COX-2) compared to GMA-MS and control. Increased generation of ROS due to MMA-SS exposure was confirmed by increased expression of Nrf2 and heme oxygenase-1 (HO-1). Results ofin vitrostudies provide evidence that stainless steel welding fume mediate inflammatory responses via activation of ROS/P-HNE/ERK1/2/Nrf2 signaling pathways. These findings were corroborated by elevated expression of COX-2, Nrf2, and HO-1 in homogenized lung tissue collected 1 day afterin vivoexposure. [ABSTRACT FROM PUBLISHER]
- Published
- 2017
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48. Oxidative Stress and Nanomaterial-Cellular Interactions.
- Author
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Kodali, Vamsi and Thrall, Brian D.
- Published
- 2015
- Full Text
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49. Evaluation of pulmonary and systemic toxicity following lung exposure to graphite nanoplates: a member of the graphene-based nanomaterial family.
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Roberts, Jenny R., Mercer, Robert R., Stefaniak, Aleksandr B., Seehra, Mohindar S., Geddam, Usha K., Chaudhuri, Ishrat S., Kyrlidis, Angelos, Kodali, Vamsi K., Sager, Tina, Kenyon, Allison, Bilgesu, Suzan A., Eye, Tracy, Scabilloni, James F., Leonard, Stephen S., Fix, Natalie R., Schwegler-Berry, Diane, Farris, Breanne Y., Wolfarth, Michael G., Porter, Dale W., and Castranova, Vincent
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PULMONARY toxicology ,LUNG physiology ,GRAPHENE -- Physiological effect ,NANOSTRUCTURED materials synthesis ,LUNG injuries - Abstract
Background: Graphene, a monolayer of carbon, is an engineered nanomaterial (ENM) with physical and chemical properties that may offer application advantages over other carbonaceous ENMs, such as carbon nanotubes (CNT). The goal of this study was to comparatively assess pulmonary and systemic toxicity of graphite nanoplates, a member of the graphene-based nanomaterial family, with respect to nanoplate size. Methods: Three sizes of graphite nanoplates [20 μm lateral (Gr20), 5 μm lateral (Gr5), and <2 μm lateral (Gr1)] ranging from 8-25 nm in thickness were characterized for difference in surface area, structure,, zeta potential, and agglomeration in dispersion medium, the vehicle for in vivo studies. Mice were exposed by pharyngeal aspiration to these 3 sizes of graphite nanoplates at doses of 4 or 40 μg/mouse, or to carbon black (CB) as a carbonaceous control material. At 4 h, 1 day, 7 days, 1 month, and 2 months post-exposure, bronchoalveolar lavage was performed to collect fluid and cells for analysis of lung injury and inflammation. Particle clearance, histopathology and gene expression in lung tissue were evaluated. In addition, protein levels and gene expression were measured in blood, heart, aorta and liver to assess systemic responses. Results: All Gr samples were found to be similarly composed of two graphite structures and agglomerated to varying degrees in DM in proportion to the lateral dimension. Surface area for Gr1 was approximately 7-fold greater than Gr5 and Gr20, but was less reactive reactive per m2. At the low dose, none of the Gr materials induced toxicity. At the high dose, Gr20 and Gr5 exposure increased indices of lung inflammation and injury in lavage fluid and tissue gene expression to a greater degree and duration than Gr1 and CB. Gr5 and Gr20 showed no or minimal lung epithelial hypertrophy and hyperplasia, and no development of fibrosis by 2 months post-exposure. In addition, the aorta and liver inflammatory and acute phase genes were transiently elevated in Gr5 and Gr20, relative to Gr1. Conclusions: Pulmonary and systemic toxicity of graphite nanoplates may be dependent on lateral size and/or surface reactivity, with the graphite nanoplates > 5 μm laterally inducing greater toxicity which peaked at the early time points post-exposure relative to the 1-2 μm graphite nanoplate. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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50. The IRE1α/XBP1s Pathway Is Essential for the Glucose Response and Protection of β Cells.
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Hassler, Justin R., Scheuner, Donalyn L., Wang, Shiyu, Han, Jaeseok, Kodali, Vamsi K., Li, Philip, Nguyen, Julie, George, Jenny S., Davis, Cory, Wu, Shengyang P., Bai, Yongsheng, Sartor, Maureen, Cavalcoli, James, Malhi, Harmeet, Baudouin, Gregory, Zhang, Yaoyang, Yates III, John R., Itkin-Ansari, Pamela, Volkmann, Niels, and Kaufman, Randal J.
- Subjects
GLUCOSE ,PANCREATIC beta cells ,PROINSULIN ,BIOSYNTHESIS ,MESSENGER RNA ,RNA splicing - Abstract
Although glucose uniquely stimulates proinsulin biosynthesis in β cells, surprisingly little is known of the underlying mechanism(s). Here, we demonstrate that glucose activates the unfolded protein response transducer inositol-requiring enzyme 1 alpha (IRE1α) to initiate X-box-binding protein 1 (Xbp1) mRNA splicing in adult primary β cells. Using mRNA sequencing (mRNA-Seq), we show that unconventional Xbp1 mRNA splicing is required to increase and decrease the expression of several hundred mRNAs encoding functions that expand the protein secretory capacity for increased insulin production and protect from oxidative damage, respectively. At 2 wk after tamoxifen-mediated Ire1α deletion, mice develop hyperglycemia and hypoinsulinemia, due to defective β cell function that was exacerbated upon feeding and glucose stimulation. Although previous reports suggest IRE1α degrades insulin mRNAs, Ire1α deletion did not alter insulin mRNA expression either in the presence or absence of glucose stimulation. Instead, β cell failure upon Ire1α deletion was primarily due to reduced proinsulin mRNA translation primarily because of defective glucose-stimulated induction of a dozen genes required for the signal recognition particle (SRP), SRP receptors, the translocon, the signal peptidase complex, and over 100 other genes with many other intracellular functions. In contrast, Ire1α deletion in β cells increased the expression of over 300 mRNAs encoding functions that cause inflammation and oxidative stress, yet only a few of these accumulated during high glucose. Antioxidant treatment significantly reduced glucose intolerance and markers of inflammation and oxidative stress in mice with β cell-specific Ire1α deletion. The results demonstrate that glucose activates IRE1α-mediated Xbp1 splicing to expand the secretory capacity of the β cell for increased proinsulin synthesis and to limit oxidative stress that leads to β cell failure. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
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