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A covalently bonded hexanuclear neutral complex, [Mn6(μ3-O)2(3-MeO-salox)6(OAc)2(H2O)4] (1), has been synthesized and characterized by single crystal X-ray diffraction analysis along with IR and HRMS studies. Complex 1 has been found to selectively interact with human serum albumin (HSA), a model transport protein. The interaction of 1 with HSA was investigated by monitoring the change in the absorbance value of HSA at λ = 280 nm with increasing concentration of 1. Likewise, fluorescence titrations were carried out under two conditions: (i) titration of a 5 μM solution of complex 1 with the gradual addition of HSA, showing a ∼9-fold fluorescence intensity enhancement at 424 nm, upon excitation at 300 nm; and (ii) upon excitation at 295 nm, titration of 5 μM HSA solution with the incremental addition of complex 1, showing a quenching of fluorescence intensity at 334 nm, with simultaneous development of a new emission band at 424 nm. A linear form of the Stern–Volmer equation gives KSV = 9.77 × 104 M−1 and the Benesi–Hildebrand plot yields the binding constant as KBH = 1.98 × 105 M−1 at 298 K. The thermodynamic parameters, ΔS°, ΔH°, and ΔG°, were estimated by using the van't Hoff relationship which infer the major contribution of hydrophobic interactions between HSA and 1. It was observed that quenching of HSA emission arises mainly through a dynamic quenching mechanism as indicated by the dependence of average lifetime 〈τ〉 on the concentration of 1. The changes in the CD (circular dichroism) spectral pattern of HSA in the presence of 1 clearly establish the variation of HSA secondary structure on interaction with 1. The most probable interaction region in HSA for 1 was determined from molecular docking studies which establish the preferential trapping of 1 in the subdomain IIA of site I in HSA and substantiated by the results of site-specific marker studies. Complex 1 was further evaluated for its antiproliferative effects in lung cancer A549 cells, which strictly inhibits the growth of the cells in both 2D and 3D mammospheres, indicating its potential application as an anticancer drug. [ABSTRACT FROM AUTHOR]

Here, we report the design and synthesis of a D⋯π⋯A-based fluorescent probe, (E)-4-(4-(dibutylamine)-2-hydroxystyryl)-1-methylquinolin-1-ium (DHMQ), which is nonfluorescent in ∼100% PBS buffer medium due to a twisted intra molecular charge transfer (TICT) phenomenon and it becomes highly fluorescent (∼149 fold) in the presence of human serum albumin (HSA), owing to the restriction of its intramolecular free rotation inside the hydrophobic binding cavity of HSA. The site-selective fluorescence displacement assay and molecular docking studies clearly reveal that DHMQ selectively binds at subdomain IB of HSA. The 3σ/slope method was adopted to determine the limit of detection (LOD) value, which was as low as 2.39 nM in ∼100% PBS medium, indicating its high sensitivity towards HSA. The low dissociation constant value [Kd = (1.066 ± 0.017) μM] suggests a strong complexation between the DHMQ and HSA. Importantly, it has been demonstrated that DHMQ is capable of detecting HSA in real human serum and urine samples and was found to be suitable for live cell imaging of HSA. [ABSTRACT FROM AUTHOR]

Human serum albumin (HSA) is regarded as a useful biomarker for rapid medical diagnosis of various disorders mainly related to the kidneys and liver. Hence, it is crucial to identify and monitor the HSA level in complex biofluids (urine and blood samples) using a simple approach. Herein, we have designed and synthesized an intramolecular charge transfer (ICT) based environment-sensitive fluorescent molecular probe, (E)-2-(3-(2-(5-methoxy-1H-indol-3-yl)vinyl)-5,5-dimethylcyclohex-2-en-1-ylidene)malononitrile (DCI-MIN), that can selectively interact with HSA in PBS buffer solution and exhibit a ~78-fold enhancement in fluorescence intensity with a significant Stokes shift (~126 nm), which is important to avoid interference from the excitation light. The significant red fluorescence response can be attributed to the suppression of free intramolecular rotation of the DCI-MIN probe inside the hydrophobic binding cavity of HSA and the low polar microenvironment present within HSA. According to the 3σ/slope method, the detection limit was found to be 1.01 nM (0.0671 mg L-1) in aqueous solutions, which is significantly lower than the normal level of HSA in healthy urine and blood serum, indicating its high sensitivity. DCI-MIN has the ability to exhibit useful applications, including the detection and quantification of HSA concentration in complex biofluids (human urine and blood samples) as well as the imaging of serum albumin in living cells. [ABSTRACT FROM AUTHOR]

The aging-associated increase of cancer risk is linked with stromal fibroblast senescence and concomitant cancer- associated fibroblast (CAF) activation. Surprisingly little is known about the role of androgen receptor (AR) signaling in this context.We have found downmodulated AR expression in dermal fibroblasts underlying premalignant skin cancer lesions (actinic keratoses and dysplastic nevi) as well as in CAFs from the 3 major skin cancer types, squamous cell carcinomas (SCCs), basal cell carcinomas, and melanomas. Functionally, decreased AR expression in primary human dermal fibroblasts (HDFs) from multiple individuals induced early steps of CAF activation, and in an orthotopic skin cancer model, AR loss in HDFs enhanced tumorigenicity of SCC and melanoma cells. Forming a complex, AR converged with CSL/RBP-J[kappa] in transcriptional repression of key CAF effector genes. AR and CSL were positive determinants of each other's expression, with BET inhibitors, which counteract the effects of decreased CSL, restoring AR expression and activity in CAFs. Increased AR expression in these cells overcame the consequences of CSL loss and was by itself sufficient to block the growth and tumor-enhancing effects of CAFs on neighboring cancer cells. As such, the findings establish AR as a target for stroma-focused cancer chemoprevention and treatment., IntroductionThe aging-associated increase of many cancer types has been linked with stromal fibroblast senescence and concomitant production of diffusible growth factors, cytokines, and extracellular matrix/ remodeling proteins (1) that are [...]

Here, we report the design and synthesis of a Schiff base probe, DBNHC ((E)-2-(2,4-dihydroxybenzylidene)-N-(naphthalen-1-yl)hydrazine-1-carbothioamide), and its interaction with bovine serum albumin (BSA). In ∼100% PBS buffer, the probe DBNHC can self-assemble into nonfluorescent nanoaggregates due to the aggregation caused quenching (ACQ) effect. However, it becomes highly fluorescent (∼14 fold) in the presence of BSA which facilitates the disassembly of nanoaggregates into its monomer. The site-selective fluorescence displacement assay and molecular docking simulations reveal that mainly hydrogen bonding, π⋯sulphur and π⋯alkyl interactions are responsible for the disassembly of nanoaggregates leading to encapsulation of DBNHC monomer at site II in BSA, resulting in a cyan green emission. The detection limit determined by the 3σ/slope method was found to be 58 nM, and the lower dissociation constant [Kd = (1.506 ± 0.196) μM] value suggests strong binding between the probe and BSA. Further, DBNHC was used for cell incubation and in vitro fluorescence imaging of BSA. [ABSTRACT FROM AUTHOR]

Human populations of Black African ancestry have a relatively high risk of aggressive cancer types, including keratinocyte‐derived squamous cell carcinomas (SCCs). We show that primary keratinocytes (HKCs) from Black African (Black) versus White Caucasian (White) individuals have on average higher oncogenic and self‐renewal potential, which are inversely related to mitochondrial electron transfer chain activity and ATP and ROS production. HSD17B7 is the top‐ranked differentially expressed gene in HKCs and Head/Neck SCCs from individuals of Black African versus Caucasian ancestries, with several ancestry‐specific eQTLs linked to its expression. Mirroring the differences between Black and White HKCs, modulation of the gene, coding for an enzyme involved in sex steroid and cholesterol biosynthesis, determines HKC and SCC cell proliferation and oncogenicity as well as mitochondrial OXPHOS activity. Overall, the findings point to a targetable determinant of cancer susceptibility among different human populations, amenable to prevention and management of the disease. SYNOPSIS: Differences in individuals' cancer susceptibility can be attributed, in part, to specific genetic and epigenetic variations. Human populations of Black African ancestry have a higher risk of aggressive cancer of various types, including keratinocyte‐derived squamous cell carcinomas (SCCs). Higher oncogenic and self‐renewal potential with lower mitochondrial respiratory and OXPHOS activities were observed in keratinocytes from Black African versus White Caucasian individuals.HSD17B7 was the top‐ranked differentially expressed gene in primary keratinocytes and Head/Neck SCCs from Black African versus Caucasian populations, with ancestry‐specific eQTLs linked to its expression.HSD17B7 codes for a targetable enzyme involved in sex steroid and cholesterol biosynthesis.HSD17B7 was found to play a key role in control of keratinocyte stem cell and oncogenic potential as well as mitochondrial OXPHOS activity. [ABSTRACT FROM AUTHOR]

Oral submucous fibrosis (OSMF) is a chronic inflammatory disease of the oral cavity but the pathogenesis of the disease is still uncertain among the areca nut chewers. Every chewer does not show up with fibrotic changes that further extend to genetic basis of OSMF pathogenesis. Genetic predisposition has been now identified as a major risk factor for increasing the susceptibility toward the disease among these chewers. In this study, two single nucleotide polymorphism (SNP) of COL1A2 rs42542 (Exon 28, G1645C) and rs421587 (Intron 28, 665+15A>G) showing mRNA splice variant trait with exon 28 skipping, extended exon 28 and intron 28 retention. The polymorphisms of the COL1A2 gene was identified by polymerase chain reaction‐direct genomic DNA sequencing from 187 patients with OSMF and 188 control participants matched on age, gender, and ethnicity. COL1A2 alternative splice variants from mRNA in human oral biopsy tissues obtained from OSMF patient and controls were confirmed by using reverse transcription PCRs (RT‐PCRs). Significant genotypic associations were observed for an exon 28 SNP (GC; P < [OR‐2.35; CI {1.44‐3.83}; P <.001] and CC [OR‐6.99; CI {1.83‐31.24}; P =.001) induces Ala to Pro substitution at amino acid 459 of COL1A2 in OSMF patients. Exon skipping is significantly associated with both the SNPs. Our results confirm the role of rs42542 and rs421587 in COL1A2 alternative splicing and support a strong role in susceptibility to OSMF, and could have served as surrogate markers. [ABSTRACT FROM AUTHOR]

A new, highly sensitive probe L2 for the selective detection of Hg2+ in organo-aqueous (H2O:CH3CN, 1:1, v/v, HEPES buffer, pH 7.2) medium has been synthesized from rhodamine 6G-hydrazide and 4-nitroindole-3-carboxaldehyde. It was thoroughly characterized by physicochemical techniques including single crystal X-ray diffraction studies. The reaction of L2 with Hg2+ gives a 1:1 stoichiometry resulting in a 146 fold fluorescence enhancement and a binding constant (Kf) of 3 × 104 M−1. The spirolactam form of the probe is non-fluorescent; however, it shows dual channel (absorbance and fluorescence) recognition of Hg2+ via CHEF effect through the opening of the spirolactam ring. The quantum yields of L2 (0.00045) and L2-Hg2+ (0.29) show the higher stability of complex in the excited state over the free ligand. The 44.5 nM LOD value demonstrates the detection of Hg2+ at a very low concentration range. Cell imaging studies show the cytoplasmic recognition of Hg2+ by L2. Experimental results are comparable with theoretical values obtained by DFT studies. The fluorescence emission of the complex was completely quenched by I- and from the reversibility studies an advance level INHIBIT logic gate and memory device can be framed. [ABSTRACT FROM AUTHOR]

A novel hexa-coordinating rhodamine-based chemosensor, HL6, with N4O2 donor atoms, selectively and rapidly recognizes Fe3+ in the presence of all biologically relevant as well as toxic metal ions, numerous anions (except for F− and I−, which quench FI) and amino acids. The lower detection limit (110 nM) along with cytoplasmic cell imaging applications with negligible cytotoxicity provides a good opportunity towards in vitro/in vivo cell imaging of Fe3+ ions. Scanning electron microscopy (SEM) studies reveal a spherical microstructure for the free ligand, HL6, which melts upon increasing the applied voltage (≥2 kV); however, this is reduced in size in the presence of SDS, morphology remaining the same. [L6-Fe]2+ gives hexagonal rod-like microstructures due to π…π stacking extended in a one dimensional fashion, which, in the presence of SDS, turn into cubic microstructures. However, in the presence of HSA both HL6 and [L6-Fe]2+ agglomerated severely. A plot of FI (or r) vs. [SDS] at constant [L6-Fe2+] (20 μM) shows a rapid decrease in FI (or r); FI or r reaches a minimum at ∼2 mM SDS and then increases and becomes saturated at ≥8 mM SDS. The initial rapid decrease in FI or r with the increase in [SDS] arises due to the breakdown of the self-assembled microstructures of [L6-Fe]2+ formed probably through π…π stacking in pure aqueous solution in the presence of SDS (≤2 mM). The increase in FI or r with [SDS] beyond 2 mM may arise due to trapping of the [L6-Fe]2+ moiety inside the micellar cavity thereby giving it a thermodynamically rigid structure. Again, fluorescence anisotropy measured as a function of HSA concentration (0–70 μM) at a fixed concentration of HL6 and Fe3+ (20 μM each) at 555 nm showed a gradual increase in r with the increase in [HSA]. Site selective binding and molecular modeling studies revealed that [L6-Fe]2+ predominantly binds in the subdomain IIA of HSA by both hydrophobic and electrostatic forces. A circular dichroism (CD) study clearly points towards the reduction in α-helical organization of the protein and subsequent increase in the coiled structure upon binding with [L6-Fe]2+ indicating a small but definitive partial unfolding of the protein. [ABSTRACT FROM AUTHOR]

A sensor (HL5) based on rhodamine 6G–en and 3-(3,5-dimethyl-pyrazol-1-ylmethyl)-2-hydroxy-5-methyl-benzaldehyde (HL4) has been developed for a highly sensitive and selective CHEF based recognition of trivalent metal ions M3+ (M = Al, Fe and Cr) over mono- and di-valent and other biologically abundant trivalent metal ions with prominent enhancement in absorption and emission intensities. A large enhancement of fluorescence intensities for Fe3+ (21 fold), Al3+ (14 fold) and Cr3+ (10 fold) was observed upon addition of 1.8 equivalents of these metals into the probe in methanol/H2O (1 : 1, v/v, pH 7.2) with the possibility of naked eye detection. The corresponding Kf values were evaluated to be 6.7 × 104 M−1 (Fe3+); 8.2 × 104 M−1 (Al3+) and 6.0 × 104 M−1 (Cr3+). The quantum yields of HL5 and [HL5–Fe3+] and [HL5–Cr3+] and [HL5–Al3+] complexes in methanol/H2O (1 : 1, v/v, pH 7.2) are found to be 0.013, 0.290, 0.120, and 0.158, respectively, using rhodamine-6G as the standard. The LOD for Fe3+, Al3+ and Cr3+ were determined by 3σ methods with values 0.29, 0.34 and 0.31 μM, respectively. An arsenate ion snatches Al from the Al–HL5 complex and quenches its fluorescence via its ring closed spirolactam form. Advanced level molecular logic devices using the inputs 2 and 4 and memory devices, have been constructed. The low cytotoxicity and large enhancement in fluorescence intensity of HL5 upon complexation with M3+ metal ions make the probe suitable for bio-imaging of M3+ (M = Al, Fe and Cr) in living cells and native cellular iron pools. [ABSTRACT FROM AUTHOR]

Cholera, an acute infection of the small intestine, is caused by Vibrio cholerae. The present study identified a hypothetical protein in V. cholerae O395, which was predicted to be acquired through horizontal gene transfer the origin of which was found to be from a phage. Its expression was further confirmed by RT-PCR. Homology based 3D model of the hypothetical protein indicated DksA like homologue. Protein binding site of 3D-model revealed a deep cleft which may influence the dimer formation and interaction with ds-DNA molecule. Also, canonical function of direct interaction with RNA polymerase (RNAP) holoenzyme in complex with ppGpp suggests its dual role in the pathogenesis of cholera. [ABSTRACT FROM AUTHOR]

ContextThe effect of 6-gingerol (6G), the bioactive component ofZingiber officinaleRoscoe (Zingiberaceae), in the reduction ofVibriocholerae(Vibrionaceae)-induced inflammation has not yet been reported. Materials and methodsCell viability assay was performed to determine the working concentration of 6G. Elisa and RT-PCR were performed with Int 407 cells treated with 50 μM 6G and 100 multiplicity of infection (MOI)V.choleraefor 0, 2, 3, 3.5, 6 and 8 h to determine the concentration of IL-8, IL-6, IL-1α and IL-1β in both protein and RNA levels. Furthermore, the effect of 50 μM 6G on upstream MAP-kinases and NF-κB signalling pathways was evaluated at 0, 10, 15, 30, 60 and 90 min. ResultsThe effective dose (ED50) value of 6G was found to be 50 μM as determined by cell viability assay. Pre-treatment with 50 μM 6G reducedV.choleraeinfection-triggered levels of IL-8, IL-6, IL-1α and IL-1β by 3.2-fold in the protein level and two-fold in the RNA level at 3.5 h. The levels of MAP-kinases signalling molecules like p38 and ERK1/2 were also reduced by two- and three-fold, respectively, after 30 min of treatment. Additionally, there was an increase in phosphorylated IκBα and down-regulation of p65 resulting in down-regulation of NF-κB pathway. ConclusionOur results showed that 6G could modulate the anti-inflammatory responses triggered byV.cholerae-induced infection in intestinal epithelial cells by modulating NF-κB pathway. [ABSTRACT FROM PUBLISHER]

A new 8-hydroxyquinoline-pyrazole based highly sensitive and selective Al3+ sensor, 8Q-NH-Pyz (H2L3), was found to exhibit a turn-on fluorescence enhancement (FE) as high as 157 fold with Kd = (1.76 ± 0.06) × 10−5 M. The 1 : 1 binding stoichiometry was revealed from the linear fit of (Fmax−F0)/(F−F0) vs. 1/[Al3+] of the fluorescence titration data which was further substantiated by Job's method and HRMS studies. The LOD determined by 3σ methods was found to be 4.29 nM and quantum yields were determined to be 0.002 and 0.28 for the ligand and its Al3+ complex, respectively. The tentative coordination environment in the [Al(L3)(H2O)]+ complex was delineated by DFT calculations. TDDFT calculations reveal spectral features comparable to the experimental ones. This constitutes the first report on the fluorescence sensing of Al3+ and hence F− in a purely aqueous medium. [ABSTRACT FROM AUTHOR]

A new type of easily synthesized rhodamine-based chemosensor L3, with potential NO2 donor atoms, selectively and rapidly recognizes Hg2+ ions in the presence of all biologically relevant metal ions and toxic heavy metals. A very low detection limit (78 nM) along with cytoplasmic cell imaging applications with no or negligible cytotoxicity indicate good potential for in vitro/in vivo cell imaging studies. SEM and TEM studies reveal strongly agglomerated aggregations in the presence of 5 mM SDS which turn into isolated core shell microstructures in the presence of 9 mM SDS. The presence of SDS causes an enhanced quantum yield (φ) and stability constant (Kf) compared to those in the absence of SDS. Again, the FI of the [L3–Hg]2+ complex in an aqueous SDS (9 mM) medium is unprecedentedly enhanced (∼143 fold) compared to that in the absence of SDS. All of these observations clearly manifest in the enhanced rigidity of the [L3–Hg]2+ species in the micro-heterogeneous environment significantly restricting its dynamic movements. This phenomenon may be ascribed as an aggregation induced emission enhancement (AIEE). The fluorescence anisotropy assumes a maximum at 5 mM SDS due to strong trapping (sandwiching) of the doubly positively charged [L3–Hg]2+ complex between two co-facial laminar microstructures of SDS under pre-miceller conditions where there is a strong electrostatic interaction that causes an improved inhibition to dynamic movement of the probe-mercury complex. On increasing the SDS concentration there is a phase transition in the SDS microstructures and micellization starts to prevail at SDS ≥ 7.0 mM. The doubly positively charged [L3–Hg]2+ complex is trapped inside the hydrophobic inner core of the micelle which is apparent from the failure to quench the fluorescence of the complex on adding 10 equivalents of H2EDTA2− solution but in the absence of SDS it is quenched effectively. [ABSTRACT FROM AUTHOR]

A 2-hydroxy-5-methyl-benzene-1,3-dicarboxaldehyde di-oxime based turn-on blue emission fluorescent probe was found to recognize both AsO2− and H2AsO4− in a purely aqueous medium in intra and extra-cellular conditions. Self-organization of the ligand in the absence and presence of AsO2− and H2AsO4− was investigated by DLS, optical microscopy, optical fluorescence microscopy and FE-SEM methods. [ABSTRACT FROM AUTHOR]

Background: The aim of this study is to evaluate the expression of human telomerase reverse transcription (hTERT) enzyme in chronic periodontitis (CP) and aggressive periodontitis (AgP) compared with healthy individuals. Methods: A total of 79 individuals consented to participate in the study. The study sample comprised healthy individuals (n = 30), patients with CP (n = 30), and patients with AgP (n = 19). Gingival tissue was collected and evaluated for hTERT expression by Western blot and immunohistochemical methods. Reverse transcription polymerase chain rea c tion was performed using the gingival crevicular fluid (GCF) samples. Results: The hTERT messenger RNA (mRNA) and protein expression was significantly higher in AgP compared with CP (P <0.001). In GCF, 53.33% of patients with CP and 68.42% of patients with AgP were showing hTERT mRNA expression, but it was not detected in the control group. The AgP tissue showed higher hTERT expression compared with CP (P <0.001). The hTERT mRNA expression did not show a correlation with gingival index (GI), plaque index (PI), probing depth (PD), and clinical attachment loss (AL) in patients with AgP, whereas hTERT protein expression was strongly correlated with GI, PI, PD, and AL in patients with AgP. The protein expression of hTERT shows significant but mo d era te correlation with GI and AL in p a tien ts with CP. Conclusion: High expression of hTERT might be associated with periodontal disease progression, suggesting that hTERT could be a potential prognostic marker. [ABSTRACT FROM AUTHOR]

Heat shock protein-47 (Hsp-47) is exclusive collagen specific molecular chaperone involved in the maturation, processing and secretion of procollagen. Hsp-47 is consistently upregulated in several fibrotic diseases. Till date there is no potential antifibrotic small molecule drug available and Hsp-47 is known to be potential therapeutic target for fibrotic disorder and drug designing. We used the de novo drug design approach followed by pharmacophore generation and virtual screening to propose Hsp-47 based antifibrotic molecules. We used e-LEAD server for de novo drug design and ZINCPharmer for 3D pharmacophore generation and virtual screening. The virtually screened molecule may inhibit direct recruitment of collagen triple helix to interact with Hsp-47 and act as antifibrotic drug. [ABSTRACT FROM AUTHOR]

A diformyl-p-cresol (DFC)-8-aminoquinoline based dual signaling probe was found to exhibit colorimetric and fluorogenic properties on selective binding towards Mg2+ and Zn2+. Turn-on fluorescent enhancements (FE) as high as 40 fold and 53 fold in 9 : 1 MeCN/water (v/v) at pH 7.2 in HEPES buffer for Mg2+ and Zn2+, respectively, were observed. The binding constants determined from the fluorescence titration data are: K = (1.52 ± 0.21) × 105 M−1 and (9.34 ± 4.0) × 103 M−2 at n = 1 and 0.5, for Mg2+ and Zn2+, respectively. The L : M binding ratios were also determined by Job's method, which support the above findings. This is further substantiated by HRMS analysis. Due to solubility in mixed organo-aqueous solvents as well as cell permeability it could be used for the in vitro/in vivo cell imaging of Mg2+ and Zn2+ ions with no or negligible cytotoxicity. This probe could be made selective towards Mg2+ over Zn2+ in the presence of TPEN, both under intra- and extracellular conditions and is superior to other Mg2+ probes which suffer from selectivity of Mg2+ over Ca2+ or Zn2+. Furthermore the dissociation constant (Kd = 6.60 μM) of the Mg2+-(DFC-8-AQ) complex is far lower than the so far reported Mg2+ probes which fall in the mM range. [ABSTRACT FROM AUTHOR]

Hereditary breast cancer constitutes 5-10% of all breast cancer cases. Inherited mutations in the BRCA1 and BRCA2 tumor-suppressor genes account for the majority of hereditary breast cancer cases. The BRCA1 C-terminal region (BRCT) has a functional duplicated globular domain, which helps with DNA damage repair and cell cycle checkpoint protein control. More than 100 distinct BRCA1 missense variants with structural and functional effects have been documented within the BRCT domain. Interpreting the results of mutation screening of tumor-suppressor genes that can have high-risk susceptibility mutations is increasingly important in clinical practice. This study includes a novel mutation, p.His1746 Pro (c.5237A>C), which was found in BRCA1 exon 20 of a breast cancer patient. In silico analysis suggests that this mutation could alter the stability and orientation of the BRCT domain and the differential binding of the BACH1 substrate. [ABSTRACT FROM AUTHOR]

Vibrio cholerae, the causative agent of epidemic cholera, has been a constant source of concern for decades. It has constantly evolved itself in order to survive the changing environment. Acquisition of new genetic elements through genomic islands has played a major role in its evolutionary process. In this present study a hypothetical protein was identified which was present in one of the predicted genomic island regions of the large chromosome of V. cholerae O395 showing a strong homology with a conserved phage encoded protein. In-silico physicochemical analysis revealed that the hypothetical protein was a periplasmic protein. Homology modeling study indicated that the hypothetical protein was an unconventional and atypical serine protease belonging to HtrA protein family. The predicted 3D-model of the hypothetical protein revealed a catalytic centre serine utilizing a single catalytic residue for proteolysis. The predicted catalytic triad may help to deduce the active site for the recruitment of the substrate for proteolysis. The active site arrangements of this predicted serine protease homologue with atypical catalytic triad is expected to allow these proteases to work in different environments of the host. [ABSTRACT FROM AUTHOR]

Developing simple probes to sense Al 3+ in vivo and in vitro in real time is highly desirable as Al 3+ imbalance has been linked to a variety of diseases in human being. Here, we introduce a new, highly selective and sensitive Schiff base chemosensor, H 2 bpet , based on benzophenone that can detect Al 3+ in a 0.01% ethanol in 50 mM HEPES buffer medium by fluorimetric sensing. The structure of the probe, H 2 bpet involves existence of keto−–enol tautomerism. Single crystal X-ray diffraction study reveals prevalence of keto form of H 2 bpet in the solid state. The binding properties of H 2 bpet with Al 3+ was thoroughly investigated by fluorescence spectroscopy and ESI–MS analyses. The binding of Al 3+ to the probe H 2 bpet , induces distinct 1 H and 13 C NMR shifts in favour of H 2 bpet (keto form):Al 3+ aggregate. The sensing mechanism of H 2 bpet toward Al 3+ and composition of H 2 bpet:Al 3+ aggregate was proposed and established by DFT/TDDFT calculations. Its application in fluorescent imaging in HepG2 cells was also tested. This report demonstrates an advancement in detection of Al 3+ with the introduction of a new benzophenone containing Schiff base chemosensor. [ABSTRACT FROM AUTHOR]

Nitric oxide (NO) is a ubiquitous messenger molecule playing a key role in various physiological and pathological processes. However, producing a selective turn-on fluorescence response to NO is a challenging task due to (a) the very short half-life of NO (typically in the range of 0.1-10 s) in the biological milieu and (b) false positive responses to reactive carbonyl species (RCS) (e.g., dehydroascorbic acid and methylglyoxal etc.) and some other reactive oxygen/nitrogen species (ROS/RNS), especially with o -phenylenediamine (OPD) based fluorosensors. To avoid these limitations, NO sensors should be designed in such a way that they react spontaneously with NO to give turn-on response within the time frame of t 1/2 (typically in the range of 0.1-10 s) of NO and λ em in the visible wavelength along with good cell permeability to achieve biocompatibility. With these views in mind, a N-nitrosation based fluorescent sensor, NDAQ, has been developed that is highly selective to NO with ∼27-fold fluorescence enhancement at λ em = 542 nm with high sensitivity (LOD = 7 ± 0.4 nM) and shorter response time, eliminating the interference of other reactive species (RCS/ROS/RNS). Furthermore, all the photophysical studies with NDAQ have been performed in 98% aqueous medium at physiological pH, indicating its good stability under physiological conditions. The kinetic assay illustrates the second-order dependency with respect to NO concentration and first-order dependency with respect to NDAQ concentration. The biological studies reveal the successful application of the probe to track both endogenous and exogenous NO in living organisms.

Background: Oral submucous fibrosis (OSF) is a debilitating collagen-metabolic disorder leading to submucosal fibrosis and trismus. Lysyl oxidase (LOX), a critical collagen biosynthetic enzyme, is up-regulated in OSF. Polymorphisms in the Lysyl oxidase gene have been associated with increased risk of OSF and might affect normal collagen synthesis, accumulation, or degradation, crucial in determining fibrosis severity., Methods: One hundred OSF cases and 100 controls were genotyped for LOX G473A(Arg158Gln) polymorphism by polymerase chain reaction-restriction fragment length polymorphism. The expression of LOX was estimated both by quantitative mRNA analysis and western blot. Total soluble collagen was evaluated from mucosal tissue obtained from OSF cases. Immunohistochemical (IHC) localization of type 1 collagen was performed in mucosal tissue obtained from patients carrying various genotypes., Results: Heterozygous G473A genotype was significantly higher in OSF cases [2.063(95% CI =1.059-4.016)], among 26-40 years age-group [4.375(95% CI=1.323-14.267),p=0.029] and in male patients [2.38 (95% CI= 1.107-5.121), p= 0.042]. LOX expression was significantly higher in cases of the heterozygous or homozygous carrier (p <0.001). We found the total soluble collagen level significantly (p <0.001) higher among patients carrying GA or AA genotype. IHC revealed focal deposition of type1 collagen in the submucosal tissue; comparatively higher deposition was evident in mucosal tissue of OSF patients carrying AA genotype., Conclusions: These findings suggest LOX G473A polymorphism confers an increased risk of OSF and may affect collagen accumulation in OSF cases.

Melanoma susceptibility differs significantly in male versus female populations. Low levels of androgen receptor (AR) in melanocytes of the two sexes are accompanied by heterogeneous expression at various stages of the disease. Irrespective of expression levels, genetic and pharmacological suppression of AR activity in melanoma cells blunts proliferation and induces senescence, while increased AR expression or activation exert opposite effects. AR down-modulation elicits a shared gene expression signature associated with better patient survival, related to interferon and cytokine signaling and DNA damage/repair. AR loss leads to dsDNA breakage, cytoplasmic leakage, and STING activation, with AR anchoring the DNA repair proteins Ku70/Ku80 to RNA Pol II and preventing RNA Pol II-associated DNA damage. AR down-modulation or pharmacological inhibition suppresses melanomagenesis, with increased intratumoral infiltration of macrophages and, in an immune-competent mouse model, cytotoxic T cells. AR provides an attractive target for improved management of melanoma independent of patient sex., Competing Interests: Disclosures: R. Dummer had intermittent, project-focused consulting and/or advisory relationships with Novartis, Merck Sharp & Dhome (MSD), Bristol-Myers Squibb (BMS), Roche, Amgen, Takeda, Pierre Fabre, Sun Pharma, Sanofi, Catalym, Second Genome, Regeneron, and Alligator outside the submitted work. No other disclosures were reported., (© 2020 Ma et al.)

A diformyl-p-cresol (DFC)-8-aminoquinoline based dual signaling probe was found to exhibit colorimetric and fluorogenic properties on selective binding towards Mg(2+) and Zn(2+). Turn-on fluorescent enhancements (FE) as high as 40 fold and 53 fold in 9 : 1 MeCN/water (v/v) at pH 7.2 in HEPES buffer for Mg(2+) and Zn(2+), respectively, were observed. The binding constants determined from the fluorescence titration data are: K = (1.52 ± 0.21) × 10(5) M(-1) and (9.34 ± 4.0) × 10(3) M(-2) at n = 1 and 0.5, for Mg(2+) and Zn(2+), respectively. The L : M binding ratios were also determined by Job's method, which support the above findings. This is further substantiated by HRMS analysis. Due to solubility in mixed organo-aqueous solvents as well as cell permeability it could be used for the in vitro/in vivo cell imaging of Mg(2+) and Zn(2+) ions with no or negligible cytotoxicity. This probe could be made selective towards Mg(2+) over Zn(2+) in the presence of TPEN, both under intra- and extracellular conditions and is superior to other Mg(2+) probes which suffer from selectivity of Mg(2+) over Ca(2+) or Zn(2+). Furthermore the dissociation constant (Kd = 6.60 μM) of the Mg(2+)-() complex is far lower than the so far reported Mg(2+) probes which fall in the mM range.

Vibrio cholerae, the causative agent of epidemic cholera, has been a constant source of concern for decades. It has constantly evolved itself in order to survive the changing environment. Acquisition of new genetic elements through genomic islands has played a major role in its evolutionary process. In this present study a hypothetical protein was identified which was present in one of the predicted genomic island regions of the large chromosome of V. cholerae O395 showing a strong homology with a conserved phage encoded protein. In-silico physicochemical analysis revealed that the hypothetical protein was a periplasmic protein. Homology modeling study indicated that the hypothetical protein was an unconventional and atypical serine protease belonging to HtrA protein family. The predicted 3D-model of the hypothetical protein revealed a catalytic centre serine utilizing a single catalytic residue for proteolysis. The predicted catalytic triad may help to deduce the active site for the recruitment of the substrate for proteolysis. The active site arrangements of this predicted serine protease homologue with atypical catalytic triad is expected to allow these proteases to work in different environments of the host.