Search

Genome-wide association studies for severe malaria (SM) have identified 30 genetic variants mostly located in non-coding regions. Here, we aimed to identify potential causal genetic variants located in these loci and demonstrate their functional activity. We systematically investigated the regulatory effect of the SNPs in linkage disequilibrium (LD) with the malaria-associated genetic variants. Annotating and prioritizing genetic variants led to the identification of a regulatory region containing five ATP2B4 SNPs in LD with rs10900585. We found significant associations between SM and rs10900585 and our candidate SNPs (rs11240734, rs1541252, rs1541253, rs1541254, and rs1541255) in a Senegalese population. Then, we demonstrated that both individual SNPs and the combination of SNPs had regulatory effects. Moreover, CRISPR/Cas9-mediated deletion of this region decreased ATP2B4 transcript and protein levels and increased Ca2+ intracellular concentration in the K562 cell line. Our data demonstrate that severe malaria-associated genetic variants alter the expression of ATP2B4 encoding a plasma membrane calcium-transporting ATPase 4 (PMCA4) expressed on red blood cells. Altering the activity of this regulatory element affects the risk of SM, likely through calcium concentration effect on parasitaemia. [ABSTRACT FROM AUTHOR]

The article presents the AMS (accelerator mass spectrometry) radiocarbon dating results of the baobab of Warang, Senegal. The investigation of the baobab revealed that it consists of 18 partially fused stems, which represents the largest number of stems reported for an African baobab. Three stems build the ring that closes a false cavity, while 15 stems grow outside the ring. Seven wood samples were collected from the false cavity and from the outer part of other stems. The dating results evinced that the stems belong to four different generations, out of which the first generation is around 500 years old. We also documented the presence of false stems, which emerge from a large adjacent stem, are triangular in horizontal section and act as an anchor. The baobab of Warang possesses 12 ordinary stems and 6 false stems. [ABSTRACT FROM AUTHOR]

We studied the lateral forces arising during the vertical indentation of the cell membrane by an optically trapped microbead, using back focal plane interferometry to determine force components in all directions. We analyzed the cell-microbead interaction and showed that indeed the force had also lateral components. Using the Hertz model, we calculated and compared the elastic moduli resulting from the total and vertical forces, showing that the differences are important and the total force should be considered. To confirm our results we analyzed cells from two breast cancer cell lines: MDA-MB-231 and HBL-100, known to have different cancer aggressiveness and hence stiffness. [ABSTRACT FROM PUBLISHER]

The heterogeneous reaction of NO(2) on Saharan sand collected from different locations has been studied at 298 K and 25% relative humidity using a horizontal coated-wall flow tube. The sand samples originated from Mauritania, Algeria, Morocco and Tunisia and were taken as simplified proxies for mineral dust. While the uptake in the dark was always very small, a photo-enhanced uptake of NO(2) was observed on all four samples showing that natural minerals do have a photochemical activity. The uptake coefficient gamma(BET) was measured for all sands. In the dark, the gamma(BET) values are (1.60 +/- 0.24) x 10(-8), (0.43 +/- 0.06) x 10(-8), (0.94 +/- 0.14) x 10(-8) and (0.59 +/- 0.09) x 10(-8) for the samples from Mauritania, Algeria, Morocco and Tunisia, respectively. Under realistic atmospheric conditions, the observed photo-enhancement leads to uptake coefficients of (1.46 +/- 0.21) x 10(-7), (0.35 + 0.05) x 10(-7), (1.30 +/- 0.19) x 10(-7) and (0.89 +/- 0.13) x 10(-7), respectively, i.e. an enhancement factor ranging from 8 to 15. This study shows that the photochemistry of natural minerals will impact significantly on the heterogeneous chemistry of NO(2).