1. Towards a Change in the Diagnostic Algorithm of Autism Spectrum Disorders: Evidence Supporting Whole Exome Sequencing as a First-Tier Test
- Author
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Ana María Camacho, Olalla Sierra Tomillo, Belén Gil-Fournier, Rogelio Simón, Alejandro Segura-Tudela, Juan Francisco Quesada-Espinosa, Maria Isabel Arranz Cano, Arancha Díaz de Bustamante, José Miguel Lezana Rosales, Pablo Morales-Pérez, Noemí Núñez, Rubén Pérez de la Fuente, Soraya Ramiro León, María Teresa Darnaude, Maria Isabel Alvarez-Mora, María José Gómez Rodríguez, Rebeca Villares Alonso, Carmen Palma Milla, Patricia Ramos Gómez, M. Moreno-García, Alexandra Juárez Rufián, Ana Arteche-López, Irene Hidalgo Mayoral, Irene Gómez-Manjón, and María Teresa Sánchez Calvín
- Subjects
Male ,0301 basic medicine ,Pediatrics ,Autism Spectrum Disorder ,Fragile X Mental Retardation Protein ,0302 clinical medicine ,Neurodevelopmental disorder ,chromosomal microarray ,Chromosomes, Human ,Copy-number variation ,Child ,Genetics (clinical) ,Exome sequencing ,Oligonucleotide Array Sequence Analysis ,medicine.diagnostic_test ,Age Factors ,Fragile X syndrome ,FMR1 testing ,Autism spectrum disorder ,Child, Preschool ,Female ,Algorithms ,Adult ,medicine.medical_specialty ,Adolescent ,lcsh:QH426-470 ,Sensitivity and Specificity ,Article ,Keywords: autism spectrum disorder ,Young Adult ,03 medical and health sciences ,mental disorders ,Genetics ,medicine ,Humans ,Genetic Testing ,Genetic testing ,business.industry ,Infant ,medicine.disease ,FMR1 ,lcsh:Genetics ,Early Diagnosis ,030104 developmental biology ,copy number variations ,diagnostic yield ,Autism ,business ,exome sequencing ,030217 neurology & neurosurgery - Abstract
Autism spectrum disorder (ASD) is a prevalent and extremely heterogeneous neurodevelopmental disorder (NDD) with a strong genetic component. In recent years, the clinical relevance of de novo mutations to the aetiology of ASD has been demonstrated. Current guidelines recommend chromosomal microarray (CMA) and a FMR1 testing as first-tier tests, but there is increasing evidence that support the use of NGS for the diagnosis of NDDs. Specifically in ASD, it has not been extensively evaluated and, thus, we performed and compared the clinical utility of CMA, FMR1 testing, and/or whole exome sequencing (WES) in a cohort of 343 ASD patients. We achieved a global diagnostic rate of 12.8% (44/343), the majority of them being characterised by WES (33/44, 75%) compared to CMA (9/44, 20.4%) or FMR1 testing (2/44, 4.5%). Taking into account the age at which genetic testing was carried out, we identified a causal genetic alteration in 22.5% (37/164) of patients over 5 years old, but only in 3.9% (7/179) of patients under this age. Our data evidence the higher diagnostic power of WES compared to CMA in the study of ASD and support the implementation of WES as a first-tier test for the genetic diagnosis of this disorder, when there is no suspicion of fragile X syndrome.
- Published
- 2021