13 results on '"Huifang Yuan"'
Search Results
2. Potential for host-symbiont communication via neurotransmitters and neuromodulators in an aneural animal, the marine sponge Amphimedon queenslandica
- Author
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Xueyan Xiang, Arturo A. Vilar Gomez, Simone P. Blomberg, Huifang Yuan, Bernard M. Degnan, and Sandie M. Degnan
- Subjects
Amphimedon ,dopamine ,neurotransmitter evolution ,origin of nervous system ,symbiosis ,trace amines ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Interkingdom signalling within a holobiont allows host and symbionts to communicate and to regulate each other’s physiological and developmental states. Here we show that a suite of signalling molecules that function as neurotransmitters and neuromodulators in most animals with nervous systems, specifically dopamine and trace amines, are produced exclusively by the bacterial symbionts of the demosponge Amphimedon queenslandica. Although sponges do not possess a nervous system, A. queenslandica expresses rhodopsin class G-protein-coupled receptors that are structurally similar to dopamine and trace amine receptors. When sponge larvae, which express these receptors, are exposed to agonists and antagonists of bilaterian dopamine and trace amine receptors, we observe marked changes in larval phototactic swimming behaviour, consistent with the sponge being competent to recognise and respond to symbiont-derived trace amine signals. These results indicate that monoamines synthesised by bacterial symbionts may be able to influence the physiology of the host sponge.
- Published
- 2023
- Full Text
- View/download PDF
3. GmbZIP1 negatively regulates ABA-induced inhibition of nodulation by targeting GmENOD40–1 in soybean
- Author
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Shimin Xu, Shanshan Song, Xiaoxu Dong, Xinyue Wang, Jun Wu, Ziyin Ren, Xuesong Wu, Jingjing Lu, Huifang Yuan, Xinying Wu, Xia Li, and Zhijuan Wang
- Subjects
ABA ,Nodulation ,GmbZIP1 ,GmENOD40–1 ,Soybean ,Botany ,QK1-989 - Abstract
Abstract Background Abscisic acid (ABA) plays an important role in plant growth and adaptation through the ABA signaling pathway. The ABA-responsive element binding (AREB/ABF) family transcriptional factors are central regulators that integrate ABA signaling with various signaling pathways. It has long been known that ABA inhibits rhizobial infection and nodule formation in legumes, but the underlying molecular mechanisms remain elusive. Results Here, we show that nodulation is very sensitive to ABA and exogenous ABA dramatically inhibits rhizobial infection and nodule formation in soybean. In addition, we proved that GmbZIP1, an AREB/ABF transcription factor, is a major regulator in both nodulation and plant response to ABA in soybean. GmbZIP1 was specifically expressed during nodule formation and development. Overexpression of GmbZIP1 resulted in reduced rhizobial infection and decreased nodule number. Furthermore, GmbZIP1 is responsive to ABA, and ectopic overexpression of GmbZIP1 increased sensitivity of Arabidopsis plants to ABA during seed germination and postgerminative growth, and conferred enhanced drought tolerance of plants. Remarkably, we found that GmbZIP1 directly binds to the promoter of GmENOD40–1, a marker gene for nodule formation, to repress its expression. Conclusion Our results identified GmbZIP1 as a node regulator that integrates ABA signaling with nodulation signaling to negatively regulate nodule formation.
- Published
- 2021
- Full Text
- View/download PDF
4. High efficient oxygen reduction performance of Fe/Fe3C nanoparticles in situ encapsulated in nitrogen-doped carbon via a novel microwave-assisted carbon bath method
- Author
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Mincong Liu, Xue Yin, Xuhong Guo, Libing Hu, Huifang Yuan, Gang Wang, Fu Wang, Long Chen, Lili Zhang, and Feng Yu
- Subjects
Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Fe-based carbon materials are widely considered promising to replace Pt/C as next-generation electrocatalysts towards oxygen reduction reaction (ORR). However, the preparation of Fe-based carbon materials is still carried out by conventional heating method (CHM). Herein, a novel microwave-assisted carbon bath method (MW-CBM) was proposed, which only took 35 min to synthesize Fe/Fe3C nanoparticles encapsulated in N-doped carbon layers derived from Prussian blue (PB). The catalyst contained large specific surface area and mesoporous structure, abundant Fe-Nx and CN active sites, unique core-shell structure. Due to the synergistic effects of these features, the as-prepared Fe/Fe3C@NC-2 displayed outstanding ORR activity with onset potential of 0.98 VRHE and half-wave potential of 0.87 VRHE, which were more positive than 20 wt.% Pt/C (0.93 VRHE and 0.82 VRHE). Besides, Fe/Fe3C@NC-2 gave a better stability and methanol tolerance than Pt/C towards ORR in alkaline media, too. Keywords: Fe/Fe3C nanoparticles, Prussian blue, Microwave, Carbon bath method, Oxygen reduction reaction
- Published
- 2019
- Full Text
- View/download PDF
5. Effective Oxygen Reduction Reaction Performance of FeCo Alloys In Situ Anchored on Nitrogen-Doped Carbon by the Microwave-Assistant Carbon Bath Method and Subsequent Plasma Etching
- Author
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Mincong Liu, Feng Yu, Cunhua Ma, Xueyan Xue, Haihai Fu, Huifang Yuan, Shengchao Yang, Gang Wang, Xuhong Guo, and Lili Zhang
- Subjects
FeCo alloy ,oxygen reduction reaction ,microwave-assisted carbon bath method ,plasma ,defect sites ,Chemistry ,QD1-999 - Abstract
Electrocatalysts with strong stability and high electrocatalytic activity have received increasing interest for oxygen reduction reactions (ORRs) in the cathodes of energy storage and conversion devices, such as fuel cells and metal-air batteries. However, there are still several bottleneck problems concerning stability, efficiency, and cost, which prevent the development of ORR catalysts. Herein, we prepared bimetal FeCo alloy nanoparticles wrapped in Nitrogen (N)-doped graphitic carbon, using Co-Fe Prussian blue analogs (Co3[Fe(CN)6]2, Co-Fe PBA) by the microwave-assisted carbon bath method (MW-CBM) as a precursor, followed by dielectric barrier discharge (DBD) plasma treatment. This novel preparation strategy not only possessed a fast synthesis rate by MW-CBM, but also caused an increase in defect sites by DBD plasma treatment. It is believed that the co-existence of Fe/Co-N sites, rich active sites, core-shell structure, and FeCo alloys could jointly enhance the catalytic activity of ORRs. The obtained catalyst exhibited a positive half-wave potential of 0.88 V vs. reversible hydrogen electrode (RHE) and an onset potential of 0.95 V vs. RHE for ORRs. The catalyst showed a higher selectivity and long-term stability than Pt/C towards ORR in alkaline media.
- Published
- 2019
- Full Text
- View/download PDF
6. Cloning and Functional Analysis of Pax6 from the Hydrothermal Vent Tubeworm Ridgeia piscesae.
- Author
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Huifang Yuan, Wei Wang, Bin Hu, Changkun Pan, Mingliang Chen, Linlin Ke, Lirong Yang, and Jianming Chen
- Subjects
Medicine ,Science - Abstract
The paired box 6 (Pax6) gene encodes a transcription factor essential for eye development in a wide range of animal lineages. Here we describe the cloning and characterization of Pax6 gene from the blind hydrothermal vent tubeworm Ridgeia piscesae (RpPax6). The deduced RpPax6 protein shares extensive sequence identity with Pax6 proteins from other species and contains both the paired domain and a complete homeodomain. Phylogenetic analysis indicates that it clusters with the corresponding sequence from the closely related species Platynereis dumerilii (P. dumerilii) of Annelida. Luciferase reporter assay indicate that RpPax6 protein suppresses the transcription of sine oculis (so) in D. melanogaster, interfering with the C-terminal of RpPax6. Taking advantage of Drosophila model, we show that RpPax6 expression is not able to rescue small eye phenotype of ey2 mutant, only to cause a more severe headless phenotype. In addition, RpPax6 expression induced apoptosis and inhibition of apoptosis can partially rescue RpPax6-induced headless phenotype. We provide evidence RpPax6 plays at least two roles: it blocks the expression of later-acting transcription factors in the eye development cascade, and it promotes cell apoptosis. Our results indicate alternation of the Pax6 function may be one of the possible causes that lead the eye absence in vestimentiferan tubeworms.
- Published
- 2016
- Full Text
- View/download PDF
7. High efficient oxygen reduction performance of Fe/Fe3C nanoparticles in situ encapsulated in nitrogen-doped carbon via a novel microwave-assisted carbon bath method
- Author
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Lili Zhang, Gang Wang, Libing Hu, Long Chen, Xue Yin, Xuhong Guo, Fu Wang, Mincong Liu, Huifang Yuan, and Feng Yu
- Subjects
In situ ,Prussian blue ,Materials science ,lcsh:T ,Materials Science (miscellaneous) ,chemistry.chemical_element ,Nanoparticle ,lcsh:Technology ,Catalysis ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,Mechanics of Materials ,lcsh:TA1-2040 ,Specific surface area ,Chemical Engineering (miscellaneous) ,Methanol ,Mesoporous material ,lcsh:Engineering (General). Civil engineering (General) ,Carbon - Abstract
Fe-based carbon materials are widely considered promising to replace Pt/C as next-generation electrocatalysts towards oxygen reduction reaction (ORR). However, the preparation of Fe-based carbon materials is still carried out by conventional heating method (CHM). Herein, a novel microwave-assisted carbon bath method (MW-CBM) was proposed, which only took 35 min to synthesize Fe/Fe3C nanoparticles encapsulated in N-doped carbon layers derived from Prussian blue (PB). The catalyst contained large specific surface area and mesoporous structure, abundant Fe-Nx and CN active sites, unique core-shell structure. Due to the synergistic effects of these features, the as-prepared Fe/Fe3C@NC-2 displayed outstanding ORR activity with onset potential of 0.98 VRHE and half-wave potential of 0.87 VRHE, which were more positive than 20 wt.% Pt/C (0.93 VRHE and 0.82 VRHE). Besides, Fe/Fe3C@NC-2 gave a better stability and methanol tolerance than Pt/C towards ORR in alkaline media, too. Keywords: Fe/Fe3C nanoparticles, Prussian blue, Microwave, Carbon bath method, Oxygen reduction reaction
- Published
- 2019
8. GmbZIP1 negatively regulates ABA-induced inhibition of nodulation by targeting GmENOD40–1 in soybean
- Author
-
Xiaoxu Dong, Xinying Wu, Xuesong Wu, Jingjing Lu, Shimin Xu, Zhijuan Wang, Huifang Yuan, Jun Wu, Ziyin Ren, Shanshan Song, Xinyue Wang, and Xia Li
- Subjects
0106 biological sciences ,0301 basic medicine ,Drought tolerance ,Regulator ,Plant Development ,Plant Science ,Biology ,Nodulation ,01 natural sciences ,Marker gene ,Plant Root Nodulation ,03 medical and health sciences ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,lcsh:Botany ,Arabidopsis ,Abscisic acid ,Transcription factor ,organic chemicals ,fungi ,food and beverages ,biology.organism_classification ,Plants, Genetically Modified ,lcsh:QK1-989 ,Cell biology ,030104 developmental biology ,chemistry ,ABA ,Germination ,GmbZIP1 ,GmENOD40–1 ,Soybeans ,Signal transduction ,Soybean ,010606 plant biology & botany ,Research Article ,Abscisic Acid ,Rhizobium ,Signal Transduction ,Transcription Factors - Abstract
BackgroundAbscisic acid (ABA) plays an important role in plant growth and adaptation through the ABA signaling pathway. The ABA-responsive element binding (AREB/ABF) family transcriptional factors are central regulators that integrate ABA signaling with various signaling pathways. It has long been known that ABA inhibits rhizobial infection and nodule formation in legumes, but the underlying molecular mechanisms remain elusive.ResultsHere, we show that nodulation is very sensitive to ABA and exogenous ABA dramatically inhibits rhizobial infection and nodule formation in soybean. In addition, we proved that GmbZIP1, an AREB/ABF transcription factor, is a major regulator in both nodulation and plant response to ABA in soybean.GmbZIP1was specifically expressed during nodule formation and development. Overexpression ofGmbZIP1resulted in reduced rhizobial infection and decreased nodule number. Furthermore,GmbZIP1is responsive to ABA, and ectopic overexpression ofGmbZIP1increased sensitivity of Arabidopsis plants to ABA during seed germination and postgerminative growth, and conferred enhanced drought tolerance of plants. Remarkably, we found that GmbZIP1 directly binds to the promoter ofGmENOD40–1, a marker gene for nodule formation, to repress its expression.ConclusionOur results identified GmbZIP1 as a node regulator that integrates ABA signaling with nodulation signaling to negatively regulate nodule formation.
- Published
- 2021
9. Effective Oxygen Reduction Reaction Performance of FeCo Alloys In Situ Anchored on Nitrogen-Doped Carbon by the Microwave-Assistant Carbon Bath Method and Subsequent Plasma Etching
- Author
-
Huifang Yuan, Lili Zhang, Xueyan Xue, Shengchao Yang, Gang Wang, Cunhua Ma, Haihai Fu, Mincong Liu, Xuhong Guo, and Feng Yu
- Subjects
Prussian blue ,oxygen reduction reaction ,Materials science ,Plasma etching ,General Chemical Engineering ,Nanoparticle ,chemistry.chemical_element ,FeCo alloy ,Dielectric barrier discharge ,microwave-assisted carbon bath method ,Article ,Bimetal ,Catalysis ,lcsh:Chemistry ,chemistry.chemical_compound ,lcsh:QD1-999 ,chemistry ,Chemical engineering ,Reversible hydrogen electrode ,General Materials Science ,defect sites ,Carbon ,plasma - Abstract
Electrocatalysts with strong stability and high electrocatalytic activity have received increasing interest for oxygen reduction reactions (ORRs) in the cathodes of energy storage and conversion devices, such as fuel cells and metal-air batteries. However, there are still several bottleneck problems concerning stability, efficiency, and cost, which prevent the development of ORR catalysts. Herein, we prepared bimetal FeCo alloy nanoparticles wrapped in Nitrogen (N)-doped graphitic carbon, using Co-Fe Prussian blue analogs (Co3[Fe(CN)6]2, Co-Fe PBA) by the microwave-assisted carbon bath method (MW-CBM) as a precursor, followed by dielectric barrier discharge (DBD) plasma treatment. This novel preparation strategy not only possessed a fast synthesis rate by MW-CBM, but also caused an increase in defect sites by DBD plasma treatment. It is believed that the co-existence of Fe/Co-N sites, rich active sites, core-shell structure, and FeCo alloys could jointly enhance the catalytic activity of ORRs. The obtained catalyst exhibited a positive half-wave potential of 0.88 V vs. reversible hydrogen electrode (RHE) and an onset potential of 0.95 V vs. RHE for ORRs. The catalyst showed a higher selectivity and long-term stability than Pt/C towards ORR in alkaline media.
- Published
- 2019
10. Hermite spectral collocation methods for fractional PDEs in unbounded domains
- Author
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Tao Tang, Tao Zhou, and Huifang Yuan
- Subjects
Work (thermodynamics) ,Hermite polynomials ,Collocation ,Physics and Astronomy (miscellaneous) ,Computer science ,Basis function ,010103 numerical & computational mathematics ,Numerical Analysis (math.NA) ,01 natural sciences ,010101 applied mathematics ,Task (computing) ,Spectral collocation ,FOS: Mathematics ,Applied mathematics ,Mathematics - Numerical Analysis ,0101 mathematics ,Scaling - Abstract
This work is concerned with spectral collocation methods for fractional PDEs in unbounded domains. The method consists of expanding the solution with proper global basis functions and imposing collocation conditions on the Gauss-Hermite points. In this work, two Hermite-type functions are employed to serve as basis functions. Our main task is to find corresponding differentiation matrices which are computed recursively. Two important issues relevant to condition numbers and scaling factors will be discussed. Applications of the spectral collocation methods to multi-term fractional PDEs are also presented. Several numerical examples are carried out to demonstrate the effectiveness of the proposed methods.
- Published
- 2018
11. FAST FOURIER-LIKE MAPPED CHEBYSHEV SPECTRAL-GALERKIN METHODS FOR PDES WITH INTEGRAL FRACTIONAL LAPLACIAN IN UNBOUNDED DOMAINS.
- Author
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CHANGTAO SHENG, JIE SHEN, TAO TANG, LI-LIAN WANG, and HUIFANG YUAN
- Subjects
FRACTIONAL integrals ,NONLINEAR Schrodinger equation ,BIORTHOGONAL systems - Abstract
In this paper, we propose a fast spectral-Galerkin method for solving PDEs involving an integral fractional Laplacian in R
d , which is built upon two essential components: (i) the Dunford-- Taylor formulation of the fractional Laplacian; and (ii) Fourier-like biorthogonal mapped Chebyshev functions (MCFs) as basis functions. As a result, the fractional Laplacian can be fully diagonalized, and the complexity of solving an elliptic fractional PDE is quasi-optimal, i.e., O((N log2 N)d ) with N being the number of modes in each spatial direction. Ample numerical tests for various decaying exact solutions show that the convergence of the fast solver perfectly matches the order of theoretical error estimates. With a suitable time discretization, the fast solver can be directly applied to a large class of nonlinear fractional PDEs. As an example, we solve the fractional nonlinear Schrödinger equation by using the fourth-order time-splitting method together with the proposed MCF--spectral-Galerkin method. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
12. RATIONAL SPECTRAL METHODS FOR PDEs INVOLVING FRACTIONAL LAPLACIAN IN UNBOUNDED DOMAINS.
- Author
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TAO TANG, LI-LIAN WANG, HUIFANG YUAN, and TAO ZHOU
- Subjects
SOBOLEV spaces ,FOURIER transforms ,GEGENBAUER polynomials ,ALGORITHMS - Abstract
Many PDEs involving fractional Laplacian are naturally set in unbounded domains with underlying solutions decaying slowly and subject to certain power law. Their numerical solutions are underexplored. This paper aims at developing accurate spectral methods using rational basis (or modified mapped Gegenbauer functions) for such models in unbounded domains. The main building block of the spectral algorithms is the explicit representations for the Fourier transform and fractional Laplacian of the rational basis, derived from some useful integral identities related to modified Bessel functions. With these at our disposal, we can construct rational spectral-Galerkin and direct collocation schemes by precomputing the associated fractional differentiation matrices. We obtain optimal error estimates of rational spectral approximation in the fractional Sobolev spaces and analyze the optimal convergence of the proposed Galerkin scheme. We also provide ample numerical results to show that the rational method outperforms the Hermite function approach. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
13. Cloning and Functional Analysis of Pax6 from the Hydrothermal Vent Tubeworm Ridgeia piscesae
- Author
-
Lirong Yang, Changkun Pan, Linlin Ke, Wei Wang, Jianming Chen, Mingliang Chen, Bin Hu, and Huifang Yuan
- Subjects
0106 biological sciences ,0301 basic medicine ,PAX6 Transcription Factor ,Paired Box ,Gene Expression ,lcsh:Medicine ,Apoptosis ,01 natural sciences ,Biochemistry ,Database and Informatics Methods ,Transcription (biology) ,Melanogaster ,Medicine and Health Sciences ,Cloning, Molecular ,lcsh:Science ,Phylogeny ,Multidisciplinary ,biology ,Cell Death ,Drosophila Melanogaster ,Animal Models ,Phenotype ,Cell biology ,Insects ,Phenotypes ,Experimental Organism Systems ,Cell Processes ,Drosophila ,Drosophila melanogaster ,Anatomy ,Sequence Analysis ,Research Article ,Arthropoda ,Bioinformatics ,Research and Analysis Methods ,010603 evolutionary biology ,03 medical and health sciences ,Model Organisms ,Protein Domains ,Ocular System ,Sequence Motif Analysis ,DNA-binding proteins ,Genetics ,Animals ,Homeobox ,Gene Regulation ,Amino Acid Sequence ,Gene ,Transcription factor ,Sequence Homology, Amino Acid ,lcsh:R ,Organisms ,Biology and Life Sciences ,Proteins ,Polychaeta ,Cell Biology ,biology.organism_classification ,Invertebrates ,Regulatory Proteins ,030104 developmental biology ,Eyes ,lcsh:Q ,PAX6 ,sense organs ,Head ,Transcription Factors - Abstract
The paired box 6 (Pax6) gene encodes a transcription factor essential for eye development in a wide range of animal lineages. Here we describe the cloning and characterization of Pax6 gene from the blind hydrothermal vent tubeworm Ridgeia piscesae (RpPax6). The deduced RpPax6 protein shares extensive sequence identity with Pax6 proteins from other species and contains both the paired domain and a complete homeodomain. Phylogenetic analysis indicates that it clusters with the corresponding sequence from the closely related species Platynereis dumerilii (P. dumerilii) of Annelida. Luciferase reporter assay indicate that RpPax6 protein suppresses the transcription of sine oculis (so) in D. melanogaster, interfering with the C-terminal of RpPax6. Taking advantage of Drosophila model, we show that RpPax6 expression is not able to rescue small eye phenotype of ey2 mutant, only to cause a more severe headless phenotype. In addition, RpPax6 expression induced apoptosis and inhibition of apoptosis can partially rescue RpPax6-induced headless phenotype. We provide evidence RpPax6 plays at least two roles: it blocks the expression of later-acting transcription factors in the eye development cascade, and it promotes cell apoptosis. Our results indicate alternation of the Pax6 function may be one of the possible causes that lead the eye absence in vestimentiferan tubeworms.
- Published
- 2016
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