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One dimensional (1-D)[superscript 1] H and [superscript 13]C NMR experiments are common tools used in undergraduate organic laboratories to characterize synthesized molecules. However, 1-D NMR spectra cannot always provide unambiguous structure determination. In research laboratories, advanced NMR spectroscopy methods are employed for structural assignments of synthesized molecules. This experiment is designed to introduce undergraduate students to the application of an advanced method of [superscript 1]H NMR spectroscopy, the 1-D selective nuclear Overhauser effect (NOE) experiment, to fully characterize the structure of two compounds. The experiment features a two-step green chemistry synthesis to produce the two compounds. In the first step of the synthesis, 4-methylaniline ("para"-toluidine) is acetylated to form 4'-methylacetanilide ("para"-acetotoluidide). The 1-D selective NOE method is used to identify the two different methyl groups present in 4'-methylacetanilide and to assign the aromatic protons. For the second step of the synthesis, bromination of the aromatic ring of 4'-methylacetanilide is accomplished using Oxone and ammonium bromide in an aqueous solvent. The 1-D selective NOE method is applied to determine the regioselective product of the bromination reaction. The 1-D selective NOE experiment is readily accessible and easily implemented. Successful interpretation of the 1-D selective NOE results leaves students confident in making structural assignments that would otherwise be based solely on theory or software prediction.

Increasingly, the undergraduate chemistry curriculum includes nuclear magnetic resonance (NMR) spectroscopy. Advanced NMR techniques are often taught including two-dimensional gradient-based experiments. An investigation of intermolecular forces including viscosity, by a variety of methods, is often integrated in the undergraduate physical and organic laboratory curricula. An experiment is described that couples advanced NMR techniques with the investigation of viscosity, a physical property based on molecular structure. (Contains 1 table and 5 figures.)

The microstructural stability of composite electrodes during electrochemical cycling is critically important as it dictates the performance of Li-ion batteries. The issue becomes even more important for the high capacity alloying anode such as silicon that typically exhibits dramatic lithiation–delithiation-induced volume changes. The solid electrolyte interphase (SEI) layer formed on the active electrode surface has a profound effect on the overall microstructural stability of composite electrodes. An ideal SEI layer allows Li+ ions in and out of the electrode, but is an insulator to electrons, preventing the electrolyte from being further reduced. However, the SEI layers formed during initial lithiation may experience changes or degradation with subsequent cycling, adversely affecting the electrode performance. A combination of hyperpolarized 129Xe and 7Li nuclear magnetic resonance spectroscopies was applied to probe the microstructures of nanocomposite silicon electrodes at various stages of the lithiation–delithiation cycle. The results obtained from this study shed light on the degradation mechanism of nanocomposite Si electrodes upon electrochemical cycling and should prove useful in the effort to design more robust electrodes in the future. [ABSTRACT FROM AUTHOR]

Presilphiperfolan-8[beta]-ol synthase, encoded by the BcBOT2 gene from the necrotrophic plant pathogen Botrytis cinerea, has catalyzed the multistep cyclization of farnesyl diphosphate to the tricyclic sesquiterpene alcohol presilphiperfolan-8[beta]-ol, the precursor of the phytotoxin botrydial. The results have described the conformation of enzyme-bound farnesyl diphosphate at the active site of presilphiperfolan-8[beta]-ol synthase.

An internal reference correlated diffusion-ordered NMR spectroscopy (DOSY) method is described for calculating the formula weight (FW) of unknown species in different solvents with different concentrations. The guidelines and other factors are discussed for successful application of this internal reference correlated DOSY method.

Various NMR techniques were used to study a chiral lithium amide and n-BuLi in tol-[d.sub.8] solution system. The results provide insight into the critical role of Li-amide/n-BuLi complex in the asymmetric addition of n-BuLi to aldehydes.

Antibiotic pentalenoactone is produced by Streptomyces species and is derived from the sesquiterpene hydrocarbon, pentalene. The molecular cloning and biochemical characterization of a second Streptomyces coelicolor terpene synthase is reported, which catalyze the [MG.sup.2+]- dependent cyclization of farnesyl diphosphate (FPP) to a novel sesquiterpene, epiisozizaene.

This enhancement of a classic laboratory experiment investigates the kinetic and thermodynamic control of a reaction utilizing ¹H NMR spectroscopy instead of melting point analysis to determine the product distribution. In this experiment, semicarbazide is reacted with cyclohexanone and 2-furaldehyde under varying buffer and temperature conditions to yield semicarbazone derivative products. After ¹H NMR analysis of the products, students compile the class data in a cooperative setting facilitated by graduate teaching assistants. As a result, students are able to analyze a larger data set in this cooperative learning environment in order to describe the product distribution of the reaction on the basis of trends as opposed to using a single data set. The application of 1H NMR spectroscopy to determine the product distribution of the reaction introduces a modern approach to study a well-established example of the kinetic and thermodynamic control of a reaction. [ABSTRACT FROM AUTHOR]

Mesoporous silicon sponge (MSS) is considered as a promising anode material for lithium ion batteries because of its preformed meso/macro porous structures that can accommodate large volume expansion during the lithiation process and its superior electrochemical performance. Temperature dependent hyperpolarized (HP) 129Xe NMR was applied to characterize the structure and porosity of MSS materials with varying pores and particle sizes. Our results reveal irregular pore structures with the presence of micropores inside the larger meso/macropore channels and each MSS material has its own characteristic pore environment with a varying degree of nonuniformity and connectivity of pores. This study demonstrates that HP 129Xe NMR is a potentially useful tool for providing a fingerprint of the structure and connectivity of the pores for each material, complementary to other characterization techniques. [ABSTRACT FROM AUTHOR]

Solution characterizations and ligand binding constants were determined for n-butyllithium in hydrocarbon and ethereal solvents using diffusion-ordered NMR. In hydrocarbon solvents, n-butyllithium exists primarily as an octamer at -40 °C and deaggregates to a hexamer when the temperature is increased. In the presence of THF or diethyl ether, n-butyllithium exists predominantly as a tetra-solvated tetramer and deaggregates to a tetra-solvated dimer in the presence of a large excess or neat THF. The ligand binding constants for the tetra-solvated tetramers were measured using ¹H NMR/DOSY titration. [ABSTRACT FROM AUTHOR]

We report the direct measurement of ligand-binding constants of organolithium complexes using a ¹H NMR/diffusion-ordered NMR spectroscopy (DOSY) titration technique. Lithium hexamethyldisilazide complexes with ethereal and ester donor ligands (THF, diethyl ether, MTBE, THP, tert-butyl acetate) are characterized using ¹H NMR and X-ray crystallography. Their aggregation and solvation states are confirmed using diffusion coefficient-formula weight correlation analysis, and the ¹H NMR/DOSY titration technique is applied to obtain their binding constants. Our work suggests that steric hindrance of ethereal ligands plays an important role in the aggregation, solvation, and reactivity of these complexes. It is noteworthy that diffusion methodology is utilized to obtain binding constants. [ABSTRACT FROM AUTHOR]

We report on the generation of a perfluoroalkyl Grignard reagent (FRMgX) by exchange reaction between a perfluoroalkyl iodide (FR-I) and a Grignard reagent (RMgX). 19F NMR was applied to monitor the generation of n-C3F7MgCl. Additional NMR techniques, including 19F COSY, NOESY, and pulsed gradient spin-echo (PGSE) diffusion NMR, were invoked to assign peaks observed in 19F spectrum. Schlenk equilibrium was observed and was significantly influenced by solvent, diethyl ether, or THF. [ABSTRACT FROM AUTHOR]

We report extension of the D-FW analysis using referenced ²H DOSY. This technique was developed in response to limitations due to peak overlay in ¹H DOSY spectra. We find a corresponding linear relationship (R² > 0.99) between log D and log FW as the basis of the D-FW analysis. The solution-state structure of THF solvated lithium diisopropyl amide (LDA) in hydrocarbon solvent was chosen to demonstrate the reliability of the methodology. We observe an equilibrium between monosolvated and disolvated dimeric LDA complexes at room temperature. Additionally we demonstrate the application of the ²H D-FW analysis using a compound with an exchangeable proton that is readily labeled with ²H. Hence, the ²H DOSY D-FW analysis is shown to provide results consistent with the ¹H DOSY method, thereby greatly extending the applicability of the D-FW analysis. [ABSTRACT FROM AUTHOR]

The solution structures of three mixed aggregates dissolved in toluene-d8 consisting of the lithiated amides derived from (S)-N-isopropyl-1-((triisopropylsilyl)oxy)propan-2-amine, (R)-N-(1-phenyl-2-((triisopropylsilyl)oxy)ethyl)propan-2-amine, or (S)-N-isobutyl-3-methyl-1-((triisopropylsilyl)oxy)butan-2-amine and n-butyllithium are characterized by various NMR experiments including diffusion-ordered NMR spectroscopy with diffusion coefficient-formula weight correlation analyses (D-FW) and other one- and two-dimensional NMR techniques. We report that steric hindrance of R1 and R2 groups of the chiral lithium amide controls the aggregation state of the mixed aggregates. With a less hindered R2 group, lithium (S)-N-isopropyl-1-((triisopropylsilyl)oxy)propan-2-amide forms mostly a 2:2 ladder-type mixed aggregate with n-butyllithium. Increase of steric hindrance of the R1 and R2 groups suppresses the formation of the 2:2 mixed aggregate and promotes formation of a 2:1 mixed aggregate. We observe that lithium (S)-N-isobutyl-3-methyl-1-((triisopropylsilyl)oxy)butan-2-amide forms both a 2:2 mixed aggregate and a 2:1 mixed trimer with n-butyllithium. Further increase in the steric hindrance of R1 and R2 groups results in the formation of only 2:1 mixed aggregate as observed with lithium (R)-N-(1-phenyl-2-((triisopropylsilyl)oxy)ethyl)propan-2-amide. [ABSTRACT FROM AUTHOR]

We report the development of isotopic-labeled 13C diffusion-ordered NMR spectroscopy (DOSY) NMR with diffusion coefficient-formula weight (D-FW) analysis and its application in characterizing the aggregation state of methyllithium aggregates and complexes with several widely used diamines. Commercially available 13c-labeled benzene and several easily synthesized 13C-labeled compounds using 13C-labeled iodomethane as the isotopic source are developed as internal references for diflusion-formula weight analysis (D-FW). The technique greatly expands die applicability of DOSY D-FW analysis to a much wider variety of compounds because of isotopic labeling. These results reveal that methyllithium exists as a tetrasolvated tetramer in diethyl ether and exclusively as bis-solvated dirners with chelating diamines [ABSTRACT FROM AUTHOR]

The crystal structure of a mixed aggregate containing lithiated (S)-N-ethyl-3-methyl-1-(triisopropylsilyloxy)- butan-2-amine derived from (S)-valinol and cyclopentyllithium is determined by X-ray diffraction. The mixed aggregate adopts a ladder structure in the solid state. The ladder-type mixed aggregate is also the major species in a toluene-d8 solution containing an approximately 1:1 molar ratio of the lithiated chiral amide to cyclopentyllithium. A variety of NMR experiments including diffusion-ordered NMR spectroscopy (DOSY) with diffusion coefficient-formula (D-FW) weight correlation analyses and other one- and two-dimensional NMR techniques allowed us to characterize the complex in solution. Solution state structures of the mixed aggregates of n-butyl, sec-butyllithium, isopropyllithium with lithiated (S)-N-ethyl-3-methyl-1-(triisopropylsilyloxy)butan-2-amine are also reported. Identical dimeric, laddertype, mixed aggregates are the major species at a stoichiometric ratio of 1:1 lithium chiral amide to alkyllithium in toluene-d8 solution for all of the different alkyllithium reagents. [ABSTRACT FROM AUTHOR]

The solid-state structures of unsolvated, hexameric cyclopentyllithium and tetrameric cyclopentyllithium tetrahydrofuran solvate were determined by single-crystal X-ray diffraction. Cyclopentyllithium easily crystallized in hydrocarbon solvents. Solution-state structural analyses of cyclopentyllithium and cyclopentyllithium-tetrahydrofuran complexes in toluene-d8 were also carried out by diffusion-ordered NMR spectroscopy with diffusion coefficient-formula weight correlation analyses and other one- and two-dimensional NMR techniques. The solution-state studies suggest that unsolvated cyclopentyllithium exists as hexamer and tetramer equilibrating with each other. Upon solvation with tetrahydrofuran, cyclopentyllithium exists mostly as a tetrahydrofuran tetrasolvated tetramer. [ABSTRACT FROM AUTHOR]

Solution-state characterization of sec-butyllithium in [D8]toluene was conducted by utilizing a variety of NMR spectroscopic experiments including diffusion-ordered NMR spectroscopy (DOSY) with diffusion-coefficient-formula-weight correlation analyses and other one- and two-dimensional NMR spectroscopic techniques. These results suggest that sec-butyllithium exists primarily as a tetramer/hexamer mixture in hydrocarbon solvents. However, the presence of roughly 2-5 % (by mol ratio) lithium sec-butoxide in both commercially available and laboratory-synthesized sec-butyllithium solutions due to the reaction with adventitious dioxygen will lead to the formation of a 1:5 sec-butoxide/ sec-butyllithium mixed hexamer. A sec-butoxide/ sec-butyllithium mixed octamer will emerge when the proportion of butoxide to butyllithium increases. [ABSTRACT FROM AUTHOR]

The solid state structure of lithiated (S)-N¹,N¹-bis(2-methoxyethyl)-N²,3-dimethylbutane-1,2-diamine, which is a chiral amide base synthesized from (S)-valine was determined by single-crystal X-ray diffraction. The complex in solution state is also characterized by a variety of NMR experiments including diffusion-ordered NMR spectroscopy (DOSY) with diffusion coefficient-formula weight correlation analyses and other one- and two-dimensional NMR techniques by dissolving the crystal in toluene-d8. The crystallography and NMR results suggest that the chiral amide is dimeric in both solid and solution states. [ABSTRACT FROM AUTHOR]

The article presents a study which discusses m/p-cresol-based novolac resin synthesis in di-tert-butyl dicarbonate (t-BOC) using multidimensional nuclear magnetic resonance (NMR) spectroscopy. The study uses Bruker 400 MHz Avance instrument to record the NMR spectra in 400.13 megahertz (MHz) frequency. Results show that polymer macrostructure leads the signal in the NMR spectrum in the range of molecular weights.

Summary: Two presumptive terpene synthases of unknown biochemical function encoded by the sscg_02150 and sscg_03688 genes of Streptomyces clavuligerus ATCC 27074 were individually expressed in Escherichia coli as N-terminal-His6-tag proteins, using codon-optimized synthetic genes. Incubation of recombinant SSCG_02150 with farnesyl diphosphate (1, FPP) gave (-)-δ-cadinene (2) while recombinant SSCG_03688 converted FPP to (+)-T-muurolol (3). Individual incubations of (-)-δ-cadinene synthase with [1,1-2H2]FPP (1a), (1S)-[1-2H]-FPP (1b), and (1R)-[1-2H]-FPP (1c) and NMR analysis of the resulting samples of deuterated (-)-δ-cadinene supported a cyclization mechanism involving the intermediacy of nerolidyl diphosphate (4) leading to a helminthogermacradienyl cation 5. Following a 1,3-hydride shift of the original H-1 si of FPP, cyclization and deprotonation will give (-)-δ-cadinene. Similar incubations with recombinant SSCG_03688 supported an analogous mechanism for the formation of (+)-T-muurolol (3), also involving a 1,3-hydride shift of the original H-1 si of FPP. [ABSTRACT FROM AUTHOR]

The utility of recently introduced 6Li diffusion-ordered NMR spectroscopy (DOSY) is demonstrated. 6Li DOSY results can be correlated to 1H data through 2-D 6Li{1H} heteronuclear Overhauser effect NMR spectroscopy (HOESY) experiments. 6Li DOSY quickly confirms 1H DOSY results and allows unambiguous assignment of resonances to specific aggregates. Well known aggregates of lithium-6 n-butyllithium (n-Bu6Li) are examined in deuterated tetrahydrofuran (THF-d8) solution as an example, and to reaffirm the previous literature conclusions about these complexes. [ABSTRACT FROM AUTHOR]

We report the direct measurement of ligand-binding constants of organolithium complexes using a 1 H NMR/diffusion-ordered NMR spectroscopy (DOSY) titration technique. Lithium hexamethyldisilazide complexes with ethereal and ester donor ligands (THF, diethyl ether, MTBE, THP, tert-butyl acetate) are characterized using 1 H NMR and X-ray crystallography. Their aggregation and solvation states are confirmed using diffusion coefficient-formula weight correlation analysis, and the 1 H NMR/DOSY titration technique is applied to obtain their binding constants. Our work suggests that steric hindrance of ethereal ligands plays an important role in the aggregation, solvation, and reactivity of these complexes. It is noteworthy that diffusion methodology is utilized to obtain binding constants.

A metastable, polymorphic hexameric crystal structure of lithium pinacolone enolate (LiOPin) is reported along with three preparation methods. NMR-based structural characterization implies that the lithium pinacolate hexamer deaggregates to a tetramer in toluene but retains mainly the hexameric structure in nonaromatic hydrocarbon solvents such as cyclohexane. Moreover, the presence of a small amount of lithium aldolate (LiOA) dramatically influences the aggregation state of LiOPin by forming a mixed aggregate with a 3:1 ratio (LiOPin 3 ·LiOA).

We report on the generation of a perfluoroalkyl Grignard reagent ((F)RMgX) by exchange reaction between a perfluoroalkyl iodide ((F)R-I) and a Grignard reagent (RMgX). (19)F NMR was applied to monitor the generation of n-C3F7MgCl. Additional NMR techniques, including (19)F COSY, NOESY, and pulsed gradient spin-echo (PGSE) diffusion NMR, were invoked to assign peaks observed in (19)F spectrum. Schlenk equilibrium was observed and was significantly influenced by solvent, diethyl ether, or THF.

We report extension of the D-FW analysis using referenced (2)H DOSY. This technique was developed in response to limitations due to peak overlay in (1)H DOSY spectra. We find a corresponding linear relationship (R(2) > 0.99) between log D and log FW as the basis of the D-FW analysis. The solution-state structure of THF solvated lithium diisopropyl amide (LDA) in hydrocarbon solvent was chosen to demonstrate the reliability of the methodology. We observe an equilibrium between monosolvated and disolvated dimeric LDA complexes at room temperature. Additionally we demonstrate the application of the (2)H D-FW analysis using a compound with an exchangeable proton that is readily labeled with (2)H. Hence, the (2)H DOSY D-FW analysis is shown to provide results consistent with the (1)H DOSY method, thereby greatly extending the applicability of the D-FW analysis.

We report the crystal structure of a substoichiometric, HMPA-trisolvated lithium pinacolone enolate tetramer (LiOPin)4·HMPA3 abbreviated as T3. In this tetramer one HMPA binds to lithium more strongly than the other two causing a reduction in spatial symmetry with corresponding loss of C3 symmetry. A variety of NMR experiments, including HMPA titration, diffusion coefficient-formula weight (D-FW) analysis, and other multinuclear one- and two-dimensional NMR techniques reveal that T3 is the major species in hydrocarbon solution when more than 0.6 equiv of HMPA is present. Due to a small amount of moisture from HMPA or air leaking into the solution, a minor complex was identified and confirmed by X-ray diffraction analysis as a mixed aggregate containing enolate, lithium hydroxide, and HMPA in a 4:2:4 ratio, [(LiOPin)4·(LiOH)2·HMPA4], that we refer to as pseudo-T4. A tetra-HMPA-solvated lithium cyclopentanone enolate tetramer was also prepared and characterized by X-ray diffraction, leading to the conclusion that steric effects dominate the formation and solvation of the pinacolone aggregates. An unusual mixed aggregate consisting of pinacolone enolate, lithium diisopropyl amide, lithium oxide, and HMPA in the ratio 5:1:1:2 is also described.

Four different chiral diamino diethers synthesized from N-isopropyl valinol or N-isopropyl alaninol were lithiated with n-butyllithium in tetrahydrofuran or diethyl ether. Crystal structures of the dilithiated diamino diethers were determined by X-ray diffraction. Three dilithiated diamino diethers including (2S,2'S)-1,1'-(butane-1,4-diylbis(oxy))bis(N-isopropylpropan-2-amine) 7, (2S,2'S)-1,1'-(pentane-1,5-diylbis(oxy))bis(N-isopropylpropan-2-amine) 8, and (2S,2'S)-1,1'-(heptane-1,7-diylbis(oxy))bis(N-isopropyl-3-methylbutan-2-amine) 9 are dimers, whereas dilithiated (2S,2'S)-1,1'-(pentane-1,5-diylbis(oxy))bis(N-isopropyl-3-methylbutan-2-amine) 10 is a monomer. The lithium atoms in all crystal structures adopt a nonequivalent coordination protocol and exist in two different environments in which one of the lithium atoms is tetra-coordinated while the other one is tri-coordinated. The solution structures of the dilithiated diamino diethers are also characterized by a variety of NMR experiments including diffusion-ordered NMR spectroscopy (DOSY) with diffusion coefficient-formula (D-FW) weight correlation analyses and other one- and two-dimensional NMR techniques.

The solution structures of three mixed aggregates dissolved in toluene-d8 consisting of the lithiated amides derived from (S)-N-isopropyl-1-((triisopropylsilyl)oxy)propan-2-amine, (R)-N-(1-phenyl-2-((triisopropylsilyl)oxy)ethyl)propan-2-amine, or (S)-N-isobutyl-3-methyl-1-((triisopropylsilyl)oxy)butan-2-amine and n-butyllithium are characterized by various NMR experiments including diffusion-ordered NMR spectroscopy with diffusion coefficient-formula weight correlation analyses (D-FW) and other one- and two-dimensional NMR techniques. We report that steric hindrance of R1 and R2 groups of the chiral lithium amide controls the aggregation state of the mixed aggregates. With a less hindered R2 group, lithium (S)-N-isopropyl-1-((triisopropylsilyl)oxy)propan-2-amide forms mostly a 2:2 ladder-type mixed aggregate with n-butyllithium. Increase of steric hindrance of the R1 and R2 groups suppresses the formation of the 2:2 mixed aggregate and promotes formation of a 2:1 mixed aggregate. We observe that lithium (S)-N-isobutyl-3-methyl-1-((triisopropylsilyl)oxy)butan-2-amide forms both a 2:2 mixed aggregate and a 2:1 mixed trimer with n-butyllithium. Further increase in the steric hindrance of R1 and R2 groups results in the formation of only 2:1 mixed aggregate as observed with lithium (R)-N-(1-phenyl-2-((triisopropylsilyl)oxy)ethyl)propan-2-amide.

We report the development of isotopic-labeled (13)C diffusion-ordered NMR spectroscopy (DOSY) NMR with diffusion coefficient-formula weight (D-FW) analysis and its application in characterizing the aggregation state of methyllithium aggregates and complexes with several widely used diamines. Commercially available (13)C-labeled benzene and several easily synthesized (13)C-labeled compounds using (13)C-labeled iodomethane as the isotopic source are developed as internal references for diffusion-formula weight analysis (D-FW). The technique greatly expands the applicability of DOSY D-FW analysis to a much wider variety of compounds because of isotopic labeling. These results reveal that methyllithium exists as a tetrasolvated tetramer in diethyl ether and exclusively as bis-solvated dimers with chelating diamines.