33 results on '"Haselmayer P"'
Search Results
2. Building a programme theory of a specialist paediatric palliative and hospice care programme: development process and methodological reflection
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Martin Wallner, Daniela Haselmayer, Martin Nagl-Cupal, Jasmin Eppel-Meichlinger, and Hanna Mayer
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Complex interventions ,Programme theory ,Theory-driven evaluation ,Paediatric palliative care ,Programme evaluation (MeSH) ,Hospice and palliative care nursing (MeSH) ,Special situations and conditions ,RC952-1245 - Abstract
Abstract Background Paediatric palliative and hospice care aims to improve the quality of life of children with life-limiting and life-threatening conditions and their families. The number of these patients has risen significantly in recent years, resulting in an increased need for palliative care for this population. Although the need for paediatric palliative and hospice care is growing, meaningful outcome evaluation to demonstrate its effectiveness as a complex healthcare intervention is in its early stages. For complex interventions (programmes), theory-based evaluations have grown in prominence in recent years. They seek to understand how and why an intervention works by uncovering its underlying mechanisms by means of programme theory. To support both outcome evaluation in paediatric palliative care and a reflective practice of programme theorizing, we aimed to describe the construction of a programme theory for a specialist paediatric palliative and hospice care programme in Austria and to offer a reflective account of its development process. Methods We drew on a combination of theory-based evaluation frameworks to construct a programme theory consisting of an action and a change component. Through multiple iterations, incorporating different stakeholders’ perspectives and drawing on different sources of knowledge and theory, we theorized how and why the programme likely achieves its intended outcomes. Results The programme theory outlines the proposed chains of events, causal mechanisms and outcomes of a specialist paediatric palliative and hospice care programme for children and families in several areas corresponding to its main conceptual tenets. Through a range of activities and interventions, the programme triggers coping and adaptation mechanisms that ultimately contribute to family and child wellbeing in physical, psychological, social, and spiritual dimensions. Established trust and partnership between children/families and healthcare professionals as well as a person-centered and family-centered approach were identified as enabling factors. Conclusions Our findings provide insights into how a specialized paediatric palliative and hospice care programme works to achieve its intended outcomes for children and families. This helps demonstrate its impact, contributing to meaningful outcome evaluation and service improvement.
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- 2024
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3. Identifying lupus Patient Subsets Through Immune Cell Deconvolution of Gene Expression Data in Two Atacicept Phase II Studies
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Matthew Studham, Cristina Vazquez‐Mateo, Eileen Samy, Philipp Haselmayer, Aida Aydemir, P. Alexander Rolfe, Joan T. Merrill, Eric F. Morand, Julie DeMartino, Amy Kao, and Robert Townsend
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Diseases of the musculoskeletal system ,RC925-935 - Abstract
Objective To use cell‐based gene signatures to identify patients with systemic lupus erythematous (SLE) in the phase II/III APRIL–SLE and phase IIb ADDRESS II trials most likely to respond to atacicept. Methods A published immune cell deconvolution algorithm based on Affymetrix gene array data was applied to whole blood gene expression from patients entering APRIL‐SLE. Five distinct patient clusters were identified. Patient characteristics, biomarkers, and clinical response to atacicept were assessed per cluster. A modified immune cell deconvolution algorithm was developed based on RNA sequencing data and applied to ADDRESS II data to identify similar patient clusters and their responses. Results Patients in APRIL‐SLE (N = 105) were segregated into the following five clusters (P1‐5) characterized by dominant cell subset signatures: high neutrophils, T helper cells and natural killer (NK) cells (P1), high plasma cells and activated NK cells (P2), high B cells and neutrophils (P3), high B cells and low neutrophils (P4), or high activated dendritic cells, activated NK cells, and neutrophils (P5). Placebo‐ and atacicept‐treated patients in clusters P2,4,5 had markedly higher British Isles Lupus Assessment Group (BILAG) A/B flare rates than those in clusters P1,3, with a greater treatment effect of atacicept on lowering flares in clusters P2,4,5. In ADDRESS II, placebo‐treated patients from P2,4,5 were less likely to be SLE Responder Index (SRI)‐4, SRI‐6, and BILAG‐Based Combined Lupus Assessment responders than those in P1,3; the response proportions again suggested lower placebo effect and a greater treatment differential for atacicept in P2,4,5. Conclusion This exploratory analysis indicates larger differences between placebo‐ and atacicept‐treated patients with SLE in a molecularly defined patient subset.
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- 2023
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4. EVOBRUTINIB TREATMENT REDUCES THE DAMAGE TO THE CNS AND INCREASES THE NUMBER OF CLASSICAL DENDRITIC CELLS IN EXPERIMENTAL MULTIPLE SCLEROSIS
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Mari Paz Serrano-Regal, Leticia Calahorra, Inmaculada Alonso-García, Ursula Boschert, Philipp Haselmayer, María Cristina Ortega, Isabel Machin-Diaz, Celia Camacho-Toledano, Jennifer García-Arocha, and Diego Clemente
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
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5. Candidates rather than context shape campaign sentiment in French Presidential Elections (1965–2017)
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Haselmayer, Martin
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- 2021
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6. Inhibition of Bruton’s tyrosine kinase interferes with pathogenic B-cell development in inflammatory CNS demyelinating disease
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Torke, Sebastian, Pretzsch, Roxanne, Häusler, Darius, Haselmayer, Philipp, Grenningloh, Roland, Boschert, Ursula, Brück, Wolfgang, and Weber, Martin S.
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- 2020
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7. Gender Bias in Asylum Adjudications: Evidence for Leniency toward Token Women
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Ecker, Alejandro, Ennser-Jedenastik, Laurenz, and Haselmayer, Martin
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- 2020
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8. Negative campaigning and its consequences: a review and a look ahead
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Haselmayer, Martin
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- 2019
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9. Identification of pharmacodynamic biomarker hypotheses through literature analysis with IBM Watson.
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Sonja Hatz, Scott Spangler, Andrew Bender, Matthew Studham, Philipp Haselmayer, Alix M B Lacoste, Van C Willis, Richard L Martin, Harsha Gurulingappa, and Ulrich Betz
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Medicine ,Science - Abstract
BackgroundPharmacodynamic biomarkers are becoming increasingly valuable for assessing drug activity and target modulation in clinical trials. However, identifying quality biomarkers is challenging due to the increasing volume and heterogeneity of relevant data describing the biological networks that underlie disease mechanisms. A biological pathway network typically includes entities (e.g. genes, proteins and chemicals/drugs) as well as the relationships between these and is typically curated or mined from structured databases and textual co-occurrence data. We propose a hybrid Natural Language Processing and directed relationships-based network analysis approach using IBM Watson for Drug Discovery to rank all human genes and identify potential candidate biomarkers, requiring only an initial determination of a specific target-disease relationship.MethodsThrough natural language processing of scientific literature, Watson for Drug Discovery creates a network of semantic relationships between biological concepts such as genes, drugs, and diseases. Using Bruton's tyrosine kinase as a case study, Watson for Drug Discovery's automatically extracted relationship network was compared with a prominent manually curated physical interaction network. Additionally, potential biomarkers for Bruton's tyrosine kinase inhibition were predicted using a matrix factorization approach and subsequently compared with expert-generated biomarkers.ResultsWatson's natural language processing generated a relationship network matching 55 (86%) genes upstream of BTK and 98 (95%) genes downstream of Bruton's tyrosine kinase in a prominent manually curated physical interaction network. Matrix factorization analysis predicted 11 of 13 genes identified by Merck subject matter experts in the top 20% of Watson for Drug Discovery's 13,595 ranked genes, with 7 in the top 5%.ConclusionTaken together, these results suggest that Watson for Drug Discovery's automatic relationship network identifies the majority of upstream and downstream genes in biological pathway networks and can be used to help with the identification and prioritization of pharmacodynamic biomarker evaluation, accelerating the early phases of disease hypothesis generation.
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- 2019
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10. Negative campaigning among coalition partners
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Martin Haselmayer and Marcelo Jenny
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Political science - Abstract
In democracies with multi-party competition, government parties face a dual challenge in election campaigns: on the one hand, they have to compete against and criticize their coalition partners. On the other hand, they should avoid virulent attacks on their partners to preserve their chances of future collaboration in government. Going beyond a dichotomous operationalization of negative campaigning, this manuscript analyses the tonality and volume of negative campaigning. Studying 3030 party press releases in four national Austrian election campaigns, different patterns for the tonality and frequency of negative campaigning reflect the electoral dilemma of government parties. Coalition parties criticize each other abundantly but refrain from ‘burning bridges’ with their partners through virulent attacks. These findings have implications for studying negative campaigning and coalition politics.
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- 2018
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11. Sentiment analysis of political communication: combining a dictionary approach with crowdcoding
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Haselmayer, Martin and Jenny, Marcelo
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- 2016
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12. A role for Toll-like receptor mediated signals in neutrophils in the pathogenesis of the anti-phospholipid syndrome.
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Gerd Gladigau, Philipp Haselmayer, Inge Scharrer, Markus Munder, Nadine Prinz, Karl Lackner, Hansjörg Schild, Pamela Stein, and Markus P Radsak
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Medicine ,Science - Abstract
The anti-phospholipid syndrome (APS) is characterized by recurrent thrombosis and occurrence of anti-phospholipid antibodies (aPL). aPL are necessary, but not sufficient for the clinical manifestations of APS. Growing evidence suggests a role of innate immune cells, in particular polymorphonuclear neutrophils (PMN) and Toll-like receptors (TLR) to be additionally involved. aPL activate endothelial cells and monocytes through a TLR4-dependent signalling pathway. Whether this is also relevant for PMN in a similar way is currently not known. To address this issue, we used purified PMN from healthy donors and stimulated them in the presence or absence of human monoclonal aPL and the TLR4 agonist LPS monitoring neutrophil effector functions, namely the oxidative burst, phagocytosis, L-Selectin shedding and IL-8 production. aPL alone were only able to induce minor activation of PMN effector functions at high concentrations. However, in the additional presence of LPS the activation threshold was markedly lower indicating a synergistic activation pathway of aPL and TLR in PMN. In summary, our results indicate that PMN effector functions are directly activated by aPL and boosted by the additional presence of microbial products. This highlights a role for PMN as important innate immune effector cells that contribute to the pathophysiology of APS.
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- 2012
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13. Soluble Triggering Receptor Expressed on Myeloid Cells 1 Is Released in Patients with Stable Chronic Obstructive Pulmonary Disease
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Markus P. Radsak, Christian Taube, Philipp Haselmayer, Stefan Tenzer, Helmut R. Salih, Rainer Wiewrodt, Roland Buhl, and Hansjörg Schild
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Immunologic diseases. Allergy ,RC581-607 - Abstract
Chronic obstructive pulmonary disease (COPD) is increasingly recognized as a systemic disease that is associated with increased serum levels of markers of systemic inflammation. The triggering receptor expressed on myeloid cells 1 (TREM-1) is a recently identified activating receptor on neutrophils, monocytes, and macrophage subsets. TREM-1 expression is upregulated by microbial products such as the toll-like receptor ligand lipoteichoic acid of Gram-positive or lipopolysaccharides of Gram-negative bacteria. In the present study, sera from 12 COPD patients (GOLD stages I–IV, FEV1 51 ± 6%) and 10 healthy individuals were retrospectively analyzed for soluble TREM-1 (sTREM-1) using a newly developed ELISA. In healthy subjects, sTREM-1 levels were low (median 0.25 ng/mL, range 0–5.9 ng/mL). In contrast, levels of sTREM-1 in sera of COPD patients were significantly increased (median 11.68 ng/mL, range 6.2–41.9 ng/mL, P
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- 2007
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14. The pathogenesis of the anti-phospholipid syndrome: Toll-like receptor mediated signals in participating neutrophils: P0058
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Stein, P., Gladigau, G., Haselmayer, P., Scharrer, I., and Lackner, K.
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- 2012
15. A role of Toll-like receptor mediated Signals in Neutrophils in the pathogenesis of the anti-phospholipid syndrome: V816
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Stein, P., Gladigau, G., Haselmayer, P., Scharrer, I., Lackner, K. J., and Radsak, M. P.
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- 2011
16. Diminished CXCR5 expression in peripheral blood of patients with Sjögren's syndrome may relate to both genotype and salivary gland homing.
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Aqrawi, L. A., Ivanchenko, M., Björk, A., Ramírez Sepúlveda, J. I., Imgenberg‐Kreuz, J., Kvarnström, M., Haselmayer, P., Jensen, J. L., Nordmark, G., Chemin, K., Skarstein, K., and Wahren‐Herlenius, M.
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SJOGREN'S syndrome ,CHEMOKINE receptors ,PROTEIN expression ,SALIVARY glands ,LOCUS (Genetics) ,PATIENTS - Abstract
Summary: Genetic investigations of Sjögren's syndrome (SS) have identified a susceptibility locus at p23.3 of chromosome 11, which contains the CXCR5 gene. C‐X‐C motif chemokine receptor 5 (CXCR5) is a chemokine receptor expressed on B and T cell subsets, and binds the chemotactic ligand C‐X‐C motif chemokine ligand 13 (CXCL13). In this study we aimed to link the genetic association with functional effects and explore the CXCR5/CXCL13 axis in SS. Expression quantitative trait loci analysis of the 11q23.3 locus was performed using B cell mRNA expression data from genotyped individuals. Lymphocyte surface markers were assessed by flow cytometry, and CXCL13 levels by a proximity extension assay. CXCR5
+ and CXCL13+ cells in minor salivary glands were detected using immunohistochemistry. Our results demonstrated that SS‐associated genetic polymorphisms affected the expression of CXCR5 (P < 0·01). Notably, a decreased percentage of CXCR5+ cells, with lower CXCR5 expression, was observed for most circulating B and T cell subsets in SS patients, reaching statistical significance in CD19+ CD27+ immunoglobulin (Ig)D+ marginal zone (P < 0·001), CD19+ CD27+ IgD– memory (P < 0·05) and CD27‐IgD double‐negative (P < 0·01) B cells and CD4+ CXCR3– CCR6+ Th17 cells (P < 0·05). CXCL13 levels were increased in patient plasma (P < 0·001), and immunohistochemical staining revealed expression of CXCL13 and higher numbers of CXCR5+ cells (P < 0·0001) within focal infiltrates and interstitially in salivary glands of SS patients. In conclusion, we link a genetic susceptibility allele for SS to a functional phenotype in terms of decreased CXCR5 expression. The decrease of CXCR5+ cells in circulation was also related to homing of B and T cells to the autoimmune target organ. Therapeutic drugs targeting the CXCR5/CXCL13 axis may be useful in SS. [ABSTRACT FROM AUTHOR]- Published
- 2018
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17. Hawthorne and the Cenci
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Haselmayer, Louis A.
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- 1942
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18. The Doggett-Crane Manuscript Album.
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HASELMAYER, LOUIS A.
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The article discusses a manuscript album owned by Iowa Wesleyan College's library. The album contains autographs, letters and documents and was created by activist Kate Newell Doggett to be sold at the Western Illinois Sanitary Fair to raise funds for soldiers wounded in the U.S. Civil War. Doggett's work as an activist and her participation in sanitary fairs are noted. The album includes antislavery documents by former Massachusetts governor John Albion Andrew, journalist Theodore Tilton and former U.S. president Andrew Johnson as well as autographs and letters by pastor Theodore Parker and author Josiah Phillips Quincy. Poems by Henry Wadsworth Longfellow and Ralph Waldo Emerson were also included in the album.
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- 1960
19. Das Deutsche Kollegium: Wesleyan's Teutonic Past.
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HASELMAYER, LOUIS A.
- Abstract
The article discusses the history of the Iowa Wesleyan College at Mt. Pleasant, Iowa. The author talks about the history of the German Building (also known as the Music Building or Physics Building) on the college's campus. The author explains that this building used to be the German College from 1873 to 1909. The German population in Iowa is examined. The Southwest German Conference of 1870 is mentioned, where the college was first planned. Subjects of the article also include German Methodist ministers, the German library, and the growth of the student body.
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- 1960
20. A COMPARISON OF POINT COUNTS AND SOUND RECORDING AS BIRD SURVEY METHODS IN AMAZONIAN SOUTHEAST PERU
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Haselmayer, John and Quinn, James S.
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- 2000
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21. Identifying lupus Patient Subsets Through Immune Cell Deconvolution of Gene Expression Data in Two Atacicept Phase II Studies.
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Studham M, Vazquez-Mateo C, Samy E, Haselmayer P, Aydemir A, Rolfe PA, Merrill JT, Morand EF, DeMartino J, Kao A, and Townsend R
- Abstract
Objective: To use cell-based gene signatures to identify patients with systemic lupus erythematous (SLE) in the phase II/III APRIL-SLE and phase IIb ADDRESS II trials most likely to respond to atacicept., Methods: A published immune cell deconvolution algorithm based on Affymetrix gene array data was applied to whole blood gene expression from patients entering APRIL-SLE. Five distinct patient clusters were identified. Patient characteristics, biomarkers, and clinical response to atacicept were assessed per cluster. A modified immune cell deconvolution algorithm was developed based on RNA sequencing data and applied to ADDRESS II data to identify similar patient clusters and their responses., Results: Patients in APRIL-SLE (N = 105) were segregated into the following five clusters (P1-5) characterized by dominant cell subset signatures: high neutrophils, T helper cells and natural killer (NK) cells (P1), high plasma cells and activated NK cells (P2), high B cells and neutrophils (P3), high B cells and low neutrophils (P4), or high activated dendritic cells, activated NK cells, and neutrophils (P5). Placebo- and atacicept-treated patients in clusters P2,4,5 had markedly higher British Isles Lupus Assessment Group (BILAG) A/B flare rates than those in clusters P1,3, with a greater treatment effect of atacicept on lowering flares in clusters P2,4,5. In ADDRESS II, placebo-treated patients from P2,4,5 were less likely to be SLE Responder Index (SRI)-4, SRI-6, and BILAG-Based Combined Lupus Assessment responders than those in P1,3; the response proportions again suggested lower placebo effect and a greater treatment differential for atacicept in P2,4,5., Conclusion: This exploratory analysis indicates larger differences between placebo- and atacicept-treated patients with SLE in a molecularly defined patient subset., (© 2023 EMD Serono, Inc and The Authors. ACR Open Rheumatology published by Wiley Periodicals LLC on behalf of American College of Rheumatology.)
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- 2023
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22. Discovery of M5049: A Novel Selective Toll-Like Receptor 7/8 Inhibitor for Treatment of Autoimmunity.
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Vlach J, Bender AT, Przetak M, Pereira A, Deshpande A, Johnson TL, Reissig S, Tzvetkov E, Musil D, Morse NT, Haselmayer P, Zimmerli SC, Okitsu SL, Walsky RL, and Sherer B
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- Animals, Female, Gene Expression Regulation drug effects, HEK293 Cells, Humans, Leukocytes, Mononuclear drug effects, Leukocytes, Mononuclear metabolism, Mice, Mice, Inbred C57BL, Models, Molecular, Protein Conformation, Toll-Like Receptor 7 chemistry, Toll-Like Receptor 7 metabolism, Toll-Like Receptor 8 chemistry, Toll-Like Receptor 8 metabolism, Autoimmunity drug effects, Drug Discovery, Toll-Like Receptor 7 antagonists & inhibitors, Toll-Like Receptor 8 antagonists & inhibitors
- Abstract
Toll-like receptor (TLR) 7 and TLR8 are transmembrane receptors that recognize single-stranded RNA. Activation of these receptors results in immune cell stimulation and inflammatory cytokine production, which is normally a protective host response. However, aberrant activation of TLR7/8 is potentially pathogenic and linked to progression of certain autoimmune diseases such as lupus. Thus, we hypothesize that an inhibitor that blocks TLR7/8 would be an effective therapeutic treatment. Prior efforts to develop inhibitors of TLR7/8 have been largely unsuccessful as a result of the challenge of producing a small-molecule inhibitor for these difficult targets. Here, we report the characterization of M5049 and compound 2, molecules which were discovered in a medicinal chemistry campaign to produce dual TLR7/8 inhibitors with drug-like properties. Both compounds showed potent and selective activity in a range of cellular assays for inhibition of TLR7/8 and block synthetic ligands and natural endogenous RNA ligands such as microRNA and Alu RNA. M5049 was found to be potent in vivo as TLR7/8 inhibition efficaciously treated disease in several murine lupus models and, interestingly, was efficacious in a disease context in which TLR7/8 activity has not previously been considered a primary disease driver. Furthermore, M5049 had greater potency in disease models than expected based on its in vitro potency and pharmacokinetic/pharmacodynamic properties. Because of its preferential accumulation in tissues, and ability to block multiple TLR7/8 RNA ligands, M5049 may be efficacious in treating autoimmunity and has the potential to provide benefit to a variety of patients with varying disease pathogenesis. SIGNIFICANCE STATEMENT: This study reports discovery of a novel toll-like receptor (TLR) 7 and TLR8 inhibitor (M5049); characterizes its binding mode, potency/selectivity, and pharmacokinetic and pharmacodynamic properties; and demonstrates its potential for treating autoimmune diseases in two mouse lupus models. TLR7/8 inhibition is unique in that it may block both innate and adaptive autoimmunity; thus, this study suggests that M5049 has the potential to benefit patients with autoimmune diseases., Competing Interests: J.V., A.T.B., M.P., A.P., A.D., T.J., E.T., N.T.M., S.F.-Z., S.L.O., R.W., and B.S. are employees of EMD Serono, Billerica (a business of Merck KGaA, Darmstadt, Germany). S.R., D.M., and P.H are employees of Merck KGaA, Darmstadt, Germany., (Copyright © 2021 by The Author(s).)
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- 2021
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23. Efficacy and Pharmacodynamic Modeling of the BTK Inhibitor Evobrutinib in Autoimmune Disease Models.
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Haselmayer P, Camps M, Liu-Bujalski L, Nguyen N, Morandi F, Head J, O'Mahony A, Zimmerli SC, Bruns L, Bender AT, Schroeder P, and Grenningloh R
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- Agammaglobulinaemia Tyrosine Kinase immunology, Animals, Arthritis, Rheumatoid enzymology, Arthritis, Rheumatoid immunology, Arthritis, Rheumatoid pathology, B-Lymphocytes enzymology, B-Lymphocytes pathology, Disease Models, Animal, Female, Humans, Lupus Erythematosus, Systemic enzymology, Lupus Erythematosus, Systemic immunology, Lupus Erythematosus, Systemic pathology, Mice, U937 Cells, Agammaglobulinaemia Tyrosine Kinase antagonists & inhibitors, Arthritis, Rheumatoid drug therapy, B-Lymphocytes immunology, Lupus Erythematosus, Systemic drug therapy, Lymphocyte Activation drug effects, Piperidines pharmacology, Pyrimidines pharmacology
- Abstract
Because of its role in mediating both B cell and Fc receptor signaling, Bruton's tyrosine kinase (BTK) is a promising target for the treatment of autoimmune diseases such as rheumatoid arthritis (RA) and systemic lupus erythematosus (SLE). Evobrutinib is a novel, highly selective, irreversible BTK inhibitor that potently inhibits BCR- and Fc receptor - mediated signaling and, thus, subsequent activation and function of human B cells and innate immune cells such as monocytes and basophils. We evaluated evobrutinib in preclinical models of RA and SLE and characterized the relationship between BTK occupancy and inhibition of disease activity. In mouse models of RA and SLE, orally administered evobrutinib displayed robust efficacy, as demonstrated by reduction of disease severity and histological damage. In the SLE model, evobrutinib inhibited B cell activation, reduced autoantibody production and plasma cell numbers, and normalized B and T cell subsets. In the RA model, efficacy was achieved despite failure to reduce autoantibodies. Pharmacokinetic/pharmacodynamic modeling showed that mean BTK occupancy in blood cells of 80% was linked to near-complete disease inhibition in both RA and SLE mouse models. In addition, evobrutinib inhibited mast cell activation in a passive cutaneous anaphylaxis model. Thus, evobrutinib achieves efficacy by acting both on B cells and innate immune cells. Taken together, our data show that evobrutinib is a promising molecule for the chronic treatment of B cell - driven autoimmune disorders., (Copyright © 2019 by The American Association of Immunologists, Inc.)
- Published
- 2019
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24. Identification of pharmacodynamic biomarker hypotheses through literature analysis with IBM Watson.
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Hatz S, Spangler S, Bender A, Studham M, Haselmayer P, Lacoste AMB, Willis VC, Martin RL, Gurulingappa H, and Betz U
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- Agammaglobulinaemia Tyrosine Kinase antagonists & inhibitors, Agammaglobulinaemia Tyrosine Kinase genetics, Agammaglobulinaemia Tyrosine Kinase metabolism, Area Under Curve, Databases, Factual, Humans, Metabolic Networks and Pathways, Natural Language Processing, ROC Curve, Small Molecule Libraries pharmacokinetics, Biomarkers analysis, Drug Discovery methods
- Abstract
Background: Pharmacodynamic biomarkers are becoming increasingly valuable for assessing drug activity and target modulation in clinical trials. However, identifying quality biomarkers is challenging due to the increasing volume and heterogeneity of relevant data describing the biological networks that underlie disease mechanisms. A biological pathway network typically includes entities (e.g. genes, proteins and chemicals/drugs) as well as the relationships between these and is typically curated or mined from structured databases and textual co-occurrence data. We propose a hybrid Natural Language Processing and directed relationships-based network analysis approach using IBM Watson for Drug Discovery to rank all human genes and identify potential candidate biomarkers, requiring only an initial determination of a specific target-disease relationship., Methods: Through natural language processing of scientific literature, Watson for Drug Discovery creates a network of semantic relationships between biological concepts such as genes, drugs, and diseases. Using Bruton's tyrosine kinase as a case study, Watson for Drug Discovery's automatically extracted relationship network was compared with a prominent manually curated physical interaction network. Additionally, potential biomarkers for Bruton's tyrosine kinase inhibition were predicted using a matrix factorization approach and subsequently compared with expert-generated biomarkers., Results: Watson's natural language processing generated a relationship network matching 55 (86%) genes upstream of BTK and 98 (95%) genes downstream of Bruton's tyrosine kinase in a prominent manually curated physical interaction network. Matrix factorization analysis predicted 11 of 13 genes identified by Merck subject matter experts in the top 20% of Watson for Drug Discovery's 13,595 ranked genes, with 7 in the top 5%., Conclusion: Taken together, these results suggest that Watson for Drug Discovery's automatic relationship network identifies the majority of upstream and downstream genes in biological pathway networks and can be used to help with the identification and prioritization of pharmacodynamic biomarker evaluation, accelerating the early phases of disease hypothesis generation., Competing Interests: Funding for this study was provided by Merck KGaA, Darmstadt Germany (https://www.emdgroup.com). Sonja Hatz, Philipp Haselmayer, Harsha Gurulingappa, and Ulrich Betz are employed by Merck KGaA. Andrew Bender and Matthew Studham are employed by EMD Serono. Scott Spangler, Alix Lacoste, Van C Willis, and Richard L Martin were all employed by IBM Watson Health during the time this research was conducted. None of these interests affected the choice of what and where to publish but the topic (pharmacodynamic biomarkers for BTK therapy) was of interest to Merck and learning what IBM's techniques showed in this case was also of interest to them. Watson for Drug Discovery is a product of IBM Watson Health. There are no patents, products in development or other marketed products to declare. This does not alter our adherence to all the PLOS ONE policies on data and materials.
- Published
- 2019
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25. A mouse model of systemic lupus erythematosus responds better to soluble TACI than to soluble BAFFR, correlating with depletion of plasma cells.
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Haselmayer P, Vigolo M, Nys J, Schneider P, and Hess H
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- Animals, Autoantibodies biosynthesis, Autoimmunity, B-Cell Activating Factor antagonists & inhibitors, B-Cell Activating Factor immunology, B-Cell Activation Factor Receptor administration & dosage, B-Cell Activation Factor Receptor immunology, B-Lymphocytes immunology, Flow Cytometry, Kidney immunology, Kidney pathology, Lupus Erythematosus, Systemic physiopathology, Lupus Erythematosus, Systemic therapy, Mice, Plasma Cells pathology, Transmembrane Activator and CAML Interactor Protein immunology, Tumor Necrosis Factor Ligand Superfamily Member 13 antagonists & inhibitors, Tumor Necrosis Factor Ligand Superfamily Member 13 immunology, Disease Models, Animal, Lupus Erythematosus, Systemic immunology, Plasma Cells immunology, Transmembrane Activator and CAML Interactor Protein administration & dosage
- Abstract
The TNF family cytokines B-cell activating factor (BAFF) and a proliferation-inducing ligand (APRIL) support plasma cell survival. It is known that inhibitors of BAFF only (BAFFR-Fc) or BAFF and APRIL (TACI-Fc) administered early enough in an NZB/NZW F1 mouse model of systemic lupus erythematosus (SLE) ameliorate clinical outcomes, pointing to a pathogenic role of BAFF. In the present study, TACI-Fc administrated at a later stage of disease, after onset of autoimmunity, decreased the number of bone marrow plasma cells and slowed down further formation of autoantibodies. TACI-Fc prevented renal damage during a 12-week treatment period regardless of autoantibody levels, while BAFFR-Fc did not despite a similar BAFF-blocking activity in vivo. TACI-Fc also decreased established plasma cells in a T-dependent hapten/carrier immunization system better than single inhibitors of BAFF or APRIL, and sometimes better than combined single inhibitors with at least equivalent BAFF and APRIL inhibitory activities. These results indicate that TACI-Fc can prevent symptoms of renal damage in a mouse model of SLE when BAFFR-Fc cannot, and point to a plasticity of plasma cells for survival factors. Targeting plasma cells with TACI-Fc might be beneficial to prevent autoantibody-mediated damages in SLE., (© 2017 The Authors. European Journal of Immunology published by WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2017
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26. Ability of Bruton's Tyrosine Kinase Inhibitors to Sequester Y551 and Prevent Phosphorylation Determines Potency for Inhibition of Fc Receptor but not B-Cell Receptor Signaling.
- Author
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Bender AT, Gardberg A, Pereira A, Johnson T, Wu Y, Grenningloh R, Head J, Morandi F, Haselmayer P, and Liu-Bujalski L
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- Agammaglobulinaemia Tyrosine Kinase, Cell Line, Tumor, Cluster Analysis, Crystallography, X-Ray, Enzyme Activation drug effects, Humans, Models, Molecular, Mutant Proteins metabolism, Phosphorylation drug effects, Protein Kinase Inhibitors chemistry, Protein-Tyrosine Kinases chemistry, Protein-Tyrosine Kinases metabolism, Protein Kinase Inhibitors pharmacology, Protein-Tyrosine Kinases antagonists & inhibitors, Receptors, Antigen, B-Cell metabolism, Receptors, Fc metabolism, Signal Transduction drug effects, Tyrosine metabolism
- Abstract
Bruton's tyrosine kinase (Btk) is expressed in a variety of hematopoietic cells. Btk has been demonstrated to regulate signaling downstream of the B-cell receptor (BCR), Fc receptors (FcRs), and toll-like receptors. It has become an attractive drug target because its inhibition may provide significant efficacy by simultaneously blocking multiple disease mechanisms. Consequently, a large number of Btk inhibitors have been developed. These compounds have diverse binding modes, and both reversible and irreversible inhibitors have been developed. Reported herein, we have tested nine Btk inhibitors and characterized on a molecular level how their interactions with Btk define their ability to block different signaling pathways. By solving the crystal structures of Btk inhibitors bound to the enzyme, we discovered that the compounds can be classified by their ability to trigger sequestration of Btk residue Y551. In cells, we found that sequestration of Y551 renders it inaccessible for phosphorylation. The ability to sequester Y551 was an important determinant of potency against FcεR signaling as Y551 sequestering compounds were more potent for inhibiting basophils and mast cells. This result was true for the inhibition of FcγR signaling as well. In contrast, Y551 sequestration was less a factor in determining potency against BCR signaling. We also found that Btk activity is regulated differentially in basophils and B cells. These results elucidate important determinants for Btk inhibitor potency against different signaling pathways and provide insight for designing new compounds with a broader inhibitory profile that will likely result in greater efficacy., (Copyright © 2017 by The American Society for Pharmacology and Experimental Therapeutics.)
- Published
- 2017
- Full Text
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27. Characterization of Novel PI3Kδ Inhibitors as Potential Therapeutics for SLE and Lupus Nephritis in Pre-Clinical Studies.
- Author
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Haselmayer P, Camps M, Muzerelle M, El Bawab S, Waltzinger C, Bruns L, Abla N, Polokoff MA, Jond-Necand C, Gaudet M, Benoit A, Bertschy Meier D, Martin C, Gretener D, Lombardi MS, Grenningloh R, Ladel C, Petersen JS, Gaillard P, and Ji H
- Abstract
SLE is a complex autoimmune inflammatory disease characterized by pathogenic autoantibody production as a consequence of uncontrolled T-B cell activity and immune-complex deposition in various organs, including kidney, leading to tissue damage and function loss. There is a high unmet need for better treatment options other than corticosteroids and immunosuppressants. Phosphoinositol-3 kinase δ (PI3Kδ) is a promising target in this respect as it is essential in mediating B- and T-cell function in mouse and human. We report the identification of selective PI3Kδ inhibitors that blocked B-, T-, and plasmacytoid dendritic cell activities in human peripheral blood and in primary cell co-cultures (BioMAP(®)) without detecting signs of undesired toxicity. In an IFNα-accelerated mouse SLE model, our PI3Kδ inhibitors blocked nephritis development, whether administered at the onset of autoantibody appearance or the onset of proteinuria. Disease amelioration correlated with normalized immune cell numbers in the spleen, reduced immune-complex deposition as well as reduced inflammation, fibrosis, and tissue damage in the kidney. Improvements were similar to those achieved with a frequently prescribed drug for lupus nephritis, the potent immunosuppressant mycophenolate mofetil. Finally, we established a pharmacodynamics/pharmacokinetic/efficacy model that revealed that a sustained PI3Kδ inhibition of 50% is sufficient to achieve full efficacy in our disease model. These data demonstrate the therapeutic potential of PI3Kδ inhibitors in SLE and lupus nephritis.
- Published
- 2014
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28. A role for Toll-like receptor mediated signals in neutrophils in the pathogenesis of the anti-phospholipid syndrome.
- Author
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Gladigau G, Haselmayer P, Scharrer I, Munder M, Prinz N, Lackner K, Schild H, Stein P, and Radsak MP
- Subjects
- Antiphospholipid Syndrome immunology, Antiphospholipid Syndrome metabolism, Apoptosis, CD11b Antigen immunology, Flow Cytometry, Humans, Interleukin-8 biosynthesis, L-Selectin metabolism, Lipopolysaccharides pharmacology, Neutrophil Activation, Neutrophils drug effects, Neutrophils immunology, Phagocytosis, Respiratory Burst, Antiphospholipid Syndrome physiopathology, Neutrophils metabolism, Signal Transduction physiology, Toll-Like Receptor 4 physiology
- Abstract
The anti-phospholipid syndrome (APS) is characterized by recurrent thrombosis and occurrence of anti-phospholipid antibodies (aPL). aPL are necessary, but not sufficient for the clinical manifestations of APS. Growing evidence suggests a role of innate immune cells, in particular polymorphonuclear neutrophils (PMN) and Toll-like receptors (TLR) to be additionally involved. aPL activate endothelial cells and monocytes through a TLR4-dependent signalling pathway. Whether this is also relevant for PMN in a similar way is currently not known. To address this issue, we used purified PMN from healthy donors and stimulated them in the presence or absence of human monoclonal aPL and the TLR4 agonist LPS monitoring neutrophil effector functions, namely the oxidative burst, phagocytosis, L-Selectin shedding and IL-8 production. aPL alone were only able to induce minor activation of PMN effector functions at high concentrations. However, in the additional presence of LPS the activation threshold was markedly lower indicating a synergistic activation pathway of aPL and TLR in PMN. In summary, our results indicate that PMN effector functions are directly activated by aPL and boosted by the additional presence of microbial products. This highlights a role for PMN as important innate immune effector cells that contribute to the pathophysiology of APS.
- Published
- 2012
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29. Signaling pathways of the TREM-1- and TLR4-mediated neutrophil oxidative burst.
- Author
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Haselmayer P, Daniel M, Tertilt C, Salih HR, Stassen M, Schild H, and Radsak MP
- Subjects
- Blotting, Western, Cell Separation, Enzyme Activation immunology, Flow Cytometry, Humans, Membrane Glycoproteins immunology, Models, Molecular, Neutrophils metabolism, Phosphatidylinositol 3-Kinases immunology, Phosphatidylinositol 3-Kinases metabolism, Proto-Oncogene Proteins c-akt immunology, Proto-Oncogene Proteins c-akt metabolism, Receptors, Immunologic immunology, Toll-Like Receptor 4 immunology, Triggering Receptor Expressed on Myeloid Cells-1, p38 Mitogen-Activated Protein Kinases immunology, p38 Mitogen-Activated Protein Kinases metabolism, Membrane Glycoproteins metabolism, Neutrophils immunology, Receptors, Immunologic metabolism, Respiratory Burst immunology, Signal Transduction immunology, Toll-Like Receptor 4 metabolism
- Abstract
The triggering receptor expressed on myeloid cells 1 (TREM-1) is involved in the innate inflammatory response to microbial infections. Activation and expression of TREM-1 by polymorphonuclear neutrophils (PMN) occurs in concert with Toll-like receptors (TLR) such as TLR4 for bacterial lipopolysaccharide. However, it is currently unclear how this is mediated on a molecular level. Using pharmacological inhibitors and Western blot analysis we demonstrate that phosphatidyl inositide 3-kinase, phospholipase C and the mitogen-activated kinase p38MAPK are essential for the TREM-1- and TLR4-induced oxidative burst of human PMN. The activation of protein kinase B and extracellular signal-related kinase show characteristic phosphorylation patterns upon single or co-ligation indicating individual activation pathways of both receptors. Taken together, we provide new insights into the mechanisms how TREM-1 and TLR interact creating synergistic activation in PMN. These results shed a new light on our understanding of how the innate inflammatory responses are regulated and might contribute to the development of future concepts for the treatment of severe inflammatory conditions such as sepsis., ((c) 2009 S. Karger AG, Basel.)
- Published
- 2009
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30. TREM-1 ligand expression on platelets enhances neutrophil activation.
- Author
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Haselmayer P, Grosse-Hovest L, von Landenberg P, Schild H, and Radsak MP
- Subjects
- Animals, Disease Models, Animal, Gene Expression Regulation drug effects, Humans, Immunity, Innate drug effects, Integrins metabolism, Lipopolysaccharides pharmacology, Membrane Glycoproteins genetics, Membrane Glycoproteins metabolism, Mice, Pneumonia drug therapy, Pneumonia metabolism, Protein Binding drug effects, Receptors, Immunologic genetics, Receptors, Immunologic metabolism, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Recombinant Fusion Proteins pharmacology, Selectins metabolism, Sepsis drug therapy, Sepsis metabolism, Triggering Receptor Expressed on Myeloid Cells-1, Blood Platelets metabolism, Ligands, Membrane Glycoproteins pharmacology, Neutrophil Activation drug effects, Neutrophils metabolism
- Abstract
The triggering receptor expressed on myeloid cells 1 (TREM-1) plays an important role in the innate immune response related to severe infections and sepsis. Modulation of TREM-1-associated activation improves the outcome in rodent models for pneumonia and sepsis. However, the identity and occurrence of the natural TREM-1 ligands are so far unknown, impairing the further understanding of the biology of this receptor. Here, we report the presence of a ligand for TREM-1 on human platelets. Using a recombinant TREM-1 fusion protein, we demonstrate specific binding of TREM-1 to platelets. TREM-1-specific signals are required for the platelet-induced augmentation of polymorphonuclear leukocyte (PMN) effector functions (provoked by LPS). However, TREM-1 interaction with its ligand is not required for platelet/PMN complex formation, which is dependent on integrins and selectins. Taken together, the results indicate that the TREM-1 ligand is expressed by platelets, and the TREM-1/ligand interaction contributes to the amplification of LPS-induced PMN activation. Our results shed new light on our understanding of TREM-1 and its role in the innate inflammatory response in infections and might contribute to the development of future concepts to treat sepsis.
- Published
- 2007
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31. Soluble triggering receptor expressed on myeloid cells 1 is released in patients with stable chronic obstructive pulmonary disease.
- Author
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Radsak MP, Taube C, Haselmayer P, Tenzer S, Salih HR, Wiewrodt R, Buhl R, and Schild H
- Subjects
- Enzyme-Linked Immunosorbent Assay, Humans, Pulmonary Disease, Chronic Obstructive pathology, Recombinant Proteins blood, Recombinant Proteins metabolism, Respiratory Function Tests, Retrospective Studies, Transfection, Triggering Receptor Expressed on Myeloid Cells-1, Biomarkers blood, Membrane Glycoproteins blood, Membrane Glycoproteins metabolism, Pulmonary Disease, Chronic Obstructive blood, Pulmonary Disease, Chronic Obstructive metabolism, Receptors, Immunologic blood
- Abstract
Chronic obstructive pulmonary disease (COPD) is increasingly recognized as a systemic disease that is associated with increased serum levels of markers of systemic inflammation. The triggering receptor expressed on myeloid cells 1 (TREM-1) is a recently identified activating receptor on neutrophils, monocytes, and macrophage subsets. TREM-1 expression is upregulated by microbial products such as the toll-like receptor ligand lipoteichoic acid of Gram-positive or lipopolysaccharides of Gram-negative bacteria. In the present study, sera from 12 COPD patients (GOLD stages I-IV, FEV1 51 +/- 6%) and 10 healthy individuals were retrospectively analyzed for soluble TREM-1 (sTREM-1) using a newly developed ELISA. In healthy subjects, sTREM-1 levels were low (median 0.25 ng/mL, range 0-5.9 ng/mL). In contrast, levels of sTREM-1 in sera of COPD patients were significantly increased (median 11.68 ng/mL, range 6.2-41.9 ng/mL, P<.05). Furthermore, serum levels of sTREM-1 showed a significant negative correlation with lung function impairment. In summary, serum concentrations of sTREM-1 are increased in patients with COPD. Prospective studies are warranted to evaluate the relevance of sTREM-1 as a potential marker of the disease in patients with COPD.
- Published
- 2007
- Full Text
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32. Herpes virus entry mediator synergizes with Toll-like receptor mediated neutrophil inflammatory responses.
- Author
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Haselmayer P, Tenzer S, Kwon BS, Jung G, Schild H, and Radsak MP
- Subjects
- Cell Degranulation immunology, Cell Survival immunology, Cells, Cultured, Humans, Inflammation Mediators immunology, Interleukin-8 metabolism, Ligands, Phagocytosis immunology, Respiratory Burst immunology, Neutrophil Activation immunology, Neutrophils immunology, Receptors, Tumor Necrosis Factor, Member 14 immunology, Toll-Like Receptors immunology
- Abstract
In microbial infections polymorphnuclear neutrophils (PMN) constitute a major part of the innate host defence, based upon their ability to rapidly accumulate in inflamed tissues and clear the site of infection from microbial pathogens by their potent effector mechanisms. The recently described transmembrane receptor herpes virus entry mediator (HVEM) is a member of the tumour necrosis factor receptor super family and is expressed on many haematopoietic cells, including T cells, B cells, natural killer cells, monocytes and PMN. Interaction of HVEM with the natural ligand LIGHT on T cells has a costimulatory effect, and increases the bactericidal activity of PMN. To further characterize the function of HVEM on PMN, we evaluated the effect of receptor ligation on human PMN effector functions using an agonistic monoclonal antibody. Here we demonstrate that activation of HVEM causes activation of neutrophil effector functions, including respiratory burst, degranulation and release of interleukin-8 in synergy with ligands for Toll-like receptors or GM-CSF. In addition, stimulation via HVEM enhanced neutrophil phagocytic activity of complement opsonized, but not of non-opsonized, particles. In conclusion, these results indicate a new, as yet unknown, participation of HVEM in the innate immune response and points to a new link between innate and adaptive immunity.
- Published
- 2006
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33. Interaction of TLR2 and TLR4 ligands with the N-terminal domain of Gp96 amplifies innate and adaptive immune responses.
- Author
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Warger T, Hilf N, Rechtsteiner G, Haselmayer P, Carrick DM, Jonuleit H, von Landenberg P, Rammensee HG, Nicchitta CV, Radsak MP, and Schild H
- Subjects
- Animals, CD8-Positive T-Lymphocytes immunology, Dogs, Endotoxins metabolism, Humans, Inflammation, Lipopolysaccharides metabolism, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Membrane Glycoproteins chemistry, Toll-Like Receptor 2 chemistry, Toll-Like Receptor 4 chemistry
- Abstract
Activation of dendritic cells by ligands for Toll-like receptors (TLR) is a crucial event in the initiation of innate and adaptive immune responses. Several classes of TLR ligands have been identified that interact with distinct members of the TLR-family. TLR4 ligands include lipopolysaccharide derived from different Gram-negative bacteria and viral proteins. Recent reports have demonstrated the TLR-mediated activation of dendritic cells by heat shock proteins (HSPs). However, doubts were raised as to what extent this effect was due to lipopolysaccharide contaminations of the HSP preparations. We re-examined this phenomenon using Gp96 or its N-terminal domain, nominally endotoxin-free (<0.5 enzyme units/mg). As described previously, innate immune cells are activated by Gp96 at high concentrations (> or =50 microg/ml) but not at lower concentrations. However, preincubation of low amounts of Gp96 with TLR2 and TLR4 ligands at concentrations unable to activate dendritic cells by themselves results in the production of high levels of proinflammatory cytokines, up-regulation of activation markers, and amplification of T cell activation. Our results provide significant new insights into the mechanism of HSP-mediated dendritic cell activation and present a new function of HSPs in the amplification of dendritic cell activation by bacterial products and induction of adaptive immune responses.
- Published
- 2006
- Full Text
- View/download PDF
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