27 results on '"Harber, J."'
Search Results
2. Further Analysis of Railplugs as a New Type of Ignitor
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Matthews, R. D., Hall, M. J., Faidley, R. W., Chiu, J. P., Zhao, X. W., Annezer, I., Koenig, M. H., Harber, J. F., Darden, M. H., Weldon, W. F., and Nichols, S. P.
- Published
- 1992
3. P2.06-02 Mesothelioma Stratified Therapy (MiST): A Phase IIA Umbrella Trial for Accelerating the Development of Precision Medicines
- Author
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Fennell, D., Hudka, M., Darlison, L., Lord, K., Bzura, A., Dzialo, J., Pritchard, C., Harber, J., Takata, T., Popat, S., Krebs, M., Nolan, L., Greystoke, A., Richards, C., Wells-Jordan, P., Branson, A., Gaba, A., Bhundia, V., Scotland, M., Mohamed, S., Dawson, A., Poille, C., Cowley, C., Walter, H., King, A., and Thomas, A.
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- 2019
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4. Clinical audit. Treatment of deep vein thrombosis in the community.
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Harber J
- Published
- 1999
5. The Human Poliovirus Receptor.
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GROMEIER, M., LU, H.-H., BERNHARDT, G., HARBER, J. J., BIBB, J. A., and WIMMER, E.
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- 1995
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6. Gender-related therapist attributions in couples therapy: a preliminary multiple case study investigation.
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Stabb, Sally D., Cox, Deborah L., Harber, Jerry L., Stabb, S D, Cox, D L, and Harber, J L
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GENDER ,ATTRIBUTION (Social psychology) ,SEX discrimination ,COUPLES therapy ,FAMILY psychotherapy - Abstract
Differential treatment by gender has been an ongoing area of concern and uncertainty both in society at large and in clinical research. In this investigation, therapist attributions over the course of therapy for three different couples were coded and analyzed to determine if cause for positive and negative events was assigned differentially to females and males. Additionally, the stability and globality dimensions of the therapist's attributions about the couples were examined for stereotypical gender-related patterns. Results indicate no gender differences in locus of causal attributions but some gender-related patterns in stability and globality dimensions. Implications for both couples therapy and gender bias in couples research are discussed. [ABSTRACT FROM AUTHOR]
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- 1997
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7. Our A&E is the best in the country but the hospital still faces closure.
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Harber J
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- 2007
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8. A gut microbiota rheostat forecasts responsiveness to PD-L1 and VEGF blockade in mesothelioma.
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Zhang M, Bzura A, Baitei EY, Zhou Z, Spicer JB, Poile C, Rogel J, Branson A, King A, Barber S, Kamata T, Dzialo J, Harber J, Greystoke A, Nusrat N, Faulkner D, Sun Q, Nolan L, Hahne JC, Scotland M, Walter H, Darlison L, Morgan B, Bajaj A, Brookes C, Hollox EJ, Lubawska D, Jama M, Griffiths G, Nakas A, Kutywayo K, Luo JL, Klampatsa A, Cooper A, Halder K, Wells-Jordan P, Zhou H, Dudbridge F, Thomas A, Richards CJ, Pritchard C, Yang H, Barer M, and Fennell DA
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- Humans, Male, Female, Middle Aged, Aged, Mesothelioma, Malignant drug therapy, Vascular Endothelial Growth Factor A metabolism, Mesothelioma immunology, Mesothelioma drug therapy, Mesothelioma microbiology, Mesothelioma pathology, Tumor Microenvironment immunology, Lung Neoplasms drug therapy, Lung Neoplasms immunology, Lung Neoplasms pathology, Lung Neoplasms genetics, Lung Neoplasms microbiology, Treatment Outcome, Gastrointestinal Microbiome drug effects, Bevacizumab therapeutic use, Bevacizumab pharmacology, B7-H1 Antigen metabolism, B7-H1 Antigen antagonists & inhibitors, Antibodies, Monoclonal, Humanized therapeutic use, Immune Checkpoint Inhibitors therapeutic use, Immune Checkpoint Inhibitors pharmacology
- Abstract
Malignant mesothelioma is a rare tumour caused by asbestos exposure that originates mainly from the pleural lining or the peritoneum. Treatment options are limited, and the prognosis is dismal. Although immune checkpoint blockade (ICB) can improve survival outcomes, the determinants of responsiveness remain elusive. Here, we report the outcomes of a multi-centre phase II clinical trial (MiST4, NCT03654833) evaluating atezolizumab and bevacizumab (AtzBev) in patients with relapsed mesothelioma. We also use tumour tissue and gut microbiome sequencing, as well as tumour spatial immunophenotyping to identify factors associated with treatment response. MIST4 met its primary endpoint with 50% 12-week disease control, and the treatment was tolerable. Aneuploidy, notably uniparental disomy (UPD), homologous recombination deficiency (HRD), epithelial-mesenchymal transition and inflammation with CD68
+ monocytes were identified as tumour-intrinsic resistance factors. The log-ratio of gut-resident microbial genera positively correlated with radiological response to AtzBev and CD8+ T cell infiltration, but was inversely correlated with UPD, HRD and tumour infiltration by CD68+ monocytes. In summary, a model is proposed in which both intrinsic and extrinsic determinants in mesothelioma cooperate to modify the tumour microenvironment and confer clinical sensitivity to AtzBev. Gut microbiota represent a potentially modifiable factor with potential to improve immunotherapy outcomes for individuals with this cancer of unmet need., (© 2024. The Author(s).)- Published
- 2024
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9. Immunotherapy approaches for malignant pleural mesothelioma.
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Fennell DA, Dulloo S, and Harber J
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- Humans, Immunotherapy methods, Tumor Microenvironment, Lung Neoplasms drug therapy, Mesothelioma therapy, Mesothelioma, Malignant, Pleural Neoplasms drug therapy, Pleural Neoplasms pathology, Vaccines therapeutic use
- Abstract
Over the past decade, immune-checkpoint inhibitors (ICIs) have revolutionized the treatment of cancer. In mesothelioma, a rare cancer with a dismal prognosis generally caused by exposure to asbestos, treatment with single or dual ICIs results in robust improvements in overall survival over previous standard-of-care therapies, both in the first-line and relapsed disease settings. Predictive biological features that underpin response to ICIs remain poorly understood; however, insights into the immune microenvironment and genomic landscape of mesothelioma as well as into their association with response or acquired resistance to ICIs are emerging. Several studies of rational combinations involving ICIs with either another ICI or a different agent are ongoing, with emerging evidence of synergistic antitumour activity. Non-ICI-based immunotherapies, such as peptide-based vaccines and mesothelin-targeted chimeric antigen receptor T cells, have demonstrated promising efficacy. Moreover, results from pivotal trials of dendritic cell vaccines and viral cytokine delivery, among others, are eagerly awaited. In this Review, we comprehensively summarize the key steps in the development of immunotherapies for mesothelioma, focusing on strategies that have led to randomized clinical evaluation and emerging predictors of response. We then forecast the future treatment opportunities that could arise from ongoing research., (© 2022. Springer Nature Limited.)
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- 2022
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10. Taxonomic synopsis of Berberis (Berberidaceae) from the northern Hengduan mountains region in China, with descriptions of seven new species.
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Li YK, Harber J, Peng C, Du ZQ, Xing YW, and Yu CC
- Abstract
Though Berberis (Berberidaceae) is widely distributed across the Eurasian landmass it is most diverse in the Himalaya-Hengduan Mountain (HHM) region. There are more than 200 species in China where it is one of the most common mountain shrubs. The study on the taxonomy and evolution of Berberis in this region can thus provide an important insight into the origin and diversification of its flora. A prerequisite to this is mapping and describing the various species of Berberis in the region - a task that despite recent progress is by no means complete. It is clear that in China there may be a significant number of species still to be described and that even with published species much about their distribution remains to be discovered. As a contribution to the first of these tasks seven new species from the northern Hengduan Mountain of N. Sichuan and S. Qinghai: Berberis chinduensis , Berberis degexianensis , Berberis jiajinshanensis , Berberis jinwu , Berberis litangensis , Berberis longquensis and Berberis riparia , are described here. Differences in overall morphology and especially in floral structures with each other and with similar species of Berberis in the same region are presented. The report is the result of phylogenetic analyses based on plastome and partial nrDNA sequences of both the seven proposed new species and a significant number of similar species already published. Provisional conclusions as to the insights provides on the history of the genetic divergence are discussed., Competing Interests: The authors declare no conflict of interests., (© 2022 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd.)
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- 2022
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11. Matter of TIME: the tumor-immune microenvironment of mesothelioma and implications for checkpoint blockade efficacy.
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Harber J, Kamata T, Pritchard C, and Fennell D
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- Female, Humans, Immune Checkpoint Inhibitors pharmacology, Male, Prognosis, Tumor Microenvironment, Immune Checkpoint Inhibitors therapeutic use, Immunotherapy methods, Mesothelioma drug therapy
- Abstract
Malignant pleural mesothelioma (MPM) is an incurable cancer with a dismal prognosis and few effective treatment options. Nonetheless, recent positive phase III trial results for immune checkpoint blockade (ICB) in MPM herald a new dawn in the fight to advance effective treatments for this cancer. Tumor mutation burden (TMB) has been widely reported to predict ICB in other cancers, but MPM is considered a low-TMB tumor. Similarly, tumor programmed death-ligand 1 (PD-L1) expression has not been proven predictive in phase III clinical trials in MPM. Consequently, the precise mechanisms that determine response to immunotherapy in this cancer remain unknown. The present review therefore aimed to synthesize our current understanding of the tumor immune microenvironment in MPM and reflects on how specific cellular features might impact immunotherapy responses or lead to resistance. This approach will inform stratified approaches to therapy and advance immunotherapy combinations in MPM to improve clinical outcomes further., Competing Interests: Competing interests: DF reports grants from Astex Therapeutics, Boehringer Ingelheim, MSD and Bayer;personal fees from Aldeyra, Inventiva and Paredox; non-financial support from Clovis, Eli Lilly and BMS; and personal fees and non-financial support from Roche. The authors have no other disclosures., (© Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY. Published by BMJ.)
- Published
- 2021
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12. Author Correction: Clonal architecture in mesothelioma is prognostic and shapes the tumour microenvironment.
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Zhang M, Luo JL, Sun Q, Harber J, Dawson AG, Nakas A, Busacca S, Sharkey AJ, Waller D, Sheaff MT, Richards C, Wells-Jordan P, Gaba A, Poile C, Baitei EY, Bzura A, Dzialo J, Jama M, Le Quesne J, Bajaj A, Martinson L, Shaw JA, Pritchard C, Kamata T, Kuse N, Brannan L, De Philip Zhang P, Yang H, Griffiths G, Wilson G, Swanton C, Dudbridge F, Hollox EJ, and Fennell DA
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- 2021
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13. Clonal architecture in mesothelioma is prognostic and shapes the tumour microenvironment.
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Zhang M, Luo JL, Sun Q, Harber J, Dawson AG, Nakas A, Busacca S, Sharkey AJ, Waller D, Sheaff MT, Richards C, Wells-Jordan P, Gaba A, Poile C, Baitei EY, Bzura A, Dzialo J, Jama M, Le Quesne J, Bajaj A, Martinson L, Shaw JA, Pritchard C, Kamata T, Kuse N, Brannan L, De Philip Zhang P, Yang H, Griffiths G, Wilson G, Swanton C, Dudbridge F, Hollox EJ, and Fennell DA
- Subjects
- Clone Cells metabolism, Clone Cells pathology, Cluster Analysis, Cohort Studies, Humans, Kaplan-Meier Estimate, Prognosis, Tumor Microenvironment genetics, Tumor Suppressor Proteins classification, Exome Sequencing methods, Chromosome Deletion, Lung Neoplasms genetics, Mesothelioma genetics, Mutation, Pleural Neoplasms genetics, Tumor Suppressor Proteins genetics
- Abstract
Malignant Pleural Mesothelioma (MPM) is typically diagnosed 20-50 years after exposure to asbestos and evolves along an unknown evolutionary trajectory. To elucidate this path, we conducted multi-regional exome sequencing of 90 tumour samples from 22 MPMs acquired at surgery. Here we show that exomic intratumour heterogeneity varies widely across the cohort. Phylogenetic tree topology ranges from linear to highly branched, reflecting a steep gradient of genomic instability. Using transfer learning, we detect repeated evolution, resolving 5 clusters that are prognostic, with temporally ordered clonal drivers. BAP1/-3p21 and FBXW7/-chr4 events are always early clonal. In contrast, NF2/-22q events, leading to Hippo pathway inactivation are predominantly late clonal, positively selected, and when subclonal, exhibit parallel evolution indicating an evolutionary constraint. Very late somatic alteration of NF2/22q occurred in one patient 12 years after surgery. Clonal architecture and evolutionary clusters dictate MPM inflammation and immune evasion. These results reveal potentially drugable evolutionary bottlenecking in MPM, and an impact of clonal architecture on shaping the immune landscape, with potential to dictate the clinical response to immune checkpoint inhibition.
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- 2021
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14. Poliovirus and its cellular receptor: a molecular genetic dissection of a virus/receptor affinity interaction.
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Solecki D, Gromeier M, Harber J, Bernhardt G, and Wimmer E
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- Animals, Evolution, Molecular, Genes, Viral, Humans, Models, Molecular, Molecular Biology, Organ Specificity, Poliomyelitis etiology, Poliovirus physiology, Protein Conformation, Receptors, Virus chemistry, Poliovirus genetics, Poliovirus pathogenicity, Receptors, Virus genetics, Receptors, Virus physiology
- Abstract
The ability of a virus to attach to a susceptible host cell is of utmost importance for the initiation of viral life cycle. Cell surface proteins called viral receptors mediate the initial steps of virus attachment and uptake. Poliovirus (PV) is one of the most studied animal viruses and its interaction with its cellular receptor, the human poliovirus receptor (hPVR) has been well characterized. This review will present our current understanding of the PV/hPVR interaction at the genetic and biochemical level. In addition, we will also discuss the implications of the PV/hPVR interaction on PV tissue tropism and the evolution of the three PV serotypes.
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- 1998
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15. Canyon rim residues, including antigenic determinants, modulate serotype-specific binding of polioviruses to mutants of the poliovirus receptor.
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Harber J, Bernhardt G, Lu HH, Sgro JY, and Wimmer E
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- Animals, Base Sequence, Capsid genetics, Capsid ultrastructure, Cell Line, DNA, Viral, Defective Viruses metabolism, HeLa Cells, Humans, Mice, Molecular Sequence Data, Mutation, Neutralization Tests, Poliovirus isolation & purification, Poliovirus physiology, Receptors, Virus genetics, Receptors, Virus ultrastructure, Serotyping, Virus Replication, Capsid metabolism, Epitopes metabolism, Poliovirus metabolism, Receptors, Virus metabolism
- Abstract
Several mouse cell lines expressing hybrid human poliovirus receptors (hPVRs) bearing mutations in the first immunoglobulin-like domain were previously characterized for their defective binding and replication of poliovirus type 1 Mahoney (G. Bernhardt, J. Harber, A. Zibert, M. DeCrombrugghe, and E. Wimmer, Virology, 203, 344-356, 1994). Here we report that these mutant hPVRs were utilized to explore differences in the binding behavior of the three serotypes of poliovirus. Type 3 polioviruses (both Sabin and the neurovirulent Leon strain) clearly bound to the hPVR mutant Q130G/GD, but were incapable of initiating infection. Also, binding at 25 degrees of poliovirus types 2 and 3 to cell lines expressing the hPVR mutants P84SYS/HPGA, L99GAE/AAAA, and D117F was greater than type 1 poliovirus. Further study of the serotype-specific interaction with mutant hPVRs was accomplished with antigenic hybrid viruses. Improved binding by antigenic hybrid viruses demonstrated that serotype-specific binding to mutant hPVRs is, in part, determined by the amino acid sequence of neutralization antigenic sites (NAgs) and the probable conformational rearrangement of amino acids adjacent to the NAg sites. Finally, site-directed mutants of poliovirus were utilized to determine the relative contributions, to hPVR interactions, of individual amino acids with solvent accessible side chains in the viral canyon. Of the 18 viable virus mutants produced, 3 (D1226A, I1089A, and VPEK1166HPGA) expressed impaired replication phenotypes on the mutant hPVR cell lines P84SYS/HYSA and D117F. A location at the rim of the poliovirus canyon was implicated for the interaction of the amino terminal domain of the poliovirus receptor with conserved and serotype-specific viral surface amino acids. The possible involvement of elements of neutralization antigenic sites in receptor binding may explain, in part, why poliovirus exists in only three serotypes.
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- 1995
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16. Mouse neurovirulence determinants of poliovirus type 1 strain LS-a map to the coding regions of capsid protein VP1 and proteinase 2Apro.
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Lu HH, Yang CF, Murdin AD, Klein MH, Harber JJ, Kew OM, and Wimmer E
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- Animals, Base Sequence, Capsid Proteins, DNA, Complementary chemistry, Female, HeLa Cells, Hot Temperature, Humans, Mice, Mutation, Structure-Activity Relationship, Virulence, Capsid genetics, Cysteine Endopeptidases genetics, Genes, Viral, Poliovirus genetics, Poliovirus pathogenicity, Viral Proteins
- Abstract
Poliovirus type 1 strain LS-a [PV1(LS-a)] is a OV variant adapted to mice by multiple passages through mouse and monkey tissues. To investigate the molecular basis underlying mouse neurovirulence of PV1(LS-a), a cDNA of the viral genome containing nucleotides 112 to 7441 was cloned, and the nucleotide sequence was determined. Compared with that of the mouse avirulent progenitor PV1(Mahoney), 54 nucleotide changes were found in the genome of the PV1(LS-a) virus, resulting in 20 amino acid substitutions in the virus polyprotein. Whereas the nucleotide changes were scattered throughout the genome, the amino acid substitutions were largely clustered in the capsid proteins and, to a certain extent, in the virus proteinase 2Apro. By in vitro mutagenesis, PV1(LS-a)-specific capsid mutations were introduced into a cDNA clone of PV1(Mahoney). We show that neither the individual amino acid mutations nor combinations of mutations in the region encoding VP1 conferred to PV1(Mahoney) the mouse-adapted phenotype of PV1(LS-a). Chimeric cDNA studies demonstrated that a recombinant type 1 virus containing the PV1(LS-a) sequence from nucleotide 2470 to nucleotide 3625 displayed a neurovirulent phenotype in mice. Further dissection of this region revealed that mouse neurovirulence of PV1(LS-a) was determined by multiple mutations in regions encoding both viral proteinase 2Apro and capsid protein VP1. The mouse neurovirulent viruses, PV1(LS-a), W1-M/LS-Pf [nucleotides 496 to 3625 from PV1(LS-a)], and W1-M/LS-NP [nucleotides 2470 to 3625 from PV1(LS-a)], showed increased sensitivity to heat treatment at 45 degrees C for 1 h. Surprisingly, the thermolabile phenotype was also displayed by a recombinant of PV1(Mahoney) carrying a PV1(LS-a) DNA fragment encoding the N-terminal portion of 2Apro. This suggests that base substitutions in the region encoding 2Apro affected capsid stability, thereby contributing to the neurovirulence of the virus in mice.
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- 1994
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17. The poliovirus receptor: identification of domains and amino acid residues critical for virus binding.
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Bernhardt G, Harber J, Zibert A, deCrombrugghe M, and Wimmer E
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- Animals, Antibodies, Monoclonal immunology, Binding Sites, Cell Adhesion Molecules metabolism, Intercellular Adhesion Molecule-1, Mice, Models, Molecular, Mutation, Receptors, Virus physiology, Structure-Activity Relationship, Poliovirus metabolism, Receptors, Virus chemistry
- Abstract
The N-terminal domain 1 of the human poliovirus receptor (hPVR), a three-domain, immunoglobulin-like molecule, was previously shown to be necessary and sufficient to confer poliovirus (PV) susceptibility to mouse cells. However, studies with truncated versions of hPVR suggested that the C-terminal hPVR domains may contribute to receptor function. We describe sets of hybrid receptors, constructed between hPVR and hICAM-1 (human intercellular adhesion molecule-1) that were tested in mouse cells for hPVR functionally. Whereas the context in which hPVR is expressed is of minor importance, all three domains of hPVR are required to reach wild-type function. Single and multiple amino acid exchanges were introduced into the first hPVR domain in order to localize regions that were involved in virus-receptor interactions. The mutations were analyzed for their ability to bind PV1 (Mahoney) or monoclonal antibodies as well as their ability to support viral replication in either the hPVR alpha or hybrid hPVR-hICAM-1 receptor context. When placed into a model of the V domain of hPVR, the effect of the mutations indicated that the C'C"D as well as the DE region harbored amino acids that contacted the PV1(M) surface in the process of receptor-virus complex formation. The binding of the virus to the receptor and subsequent uptake into the cells were linked; no hPVR mutants were observed that bound the virus but blocked infection. N-glycosylation of the four sites in domains 1 and 2 is not required for hPVR function, but glycosylation in domain 1 has a greater effect on receptor function than that of domain 2.
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- 1994
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18. Antibody-complexed foot-and-mouth disease virus, but not poliovirus, can infect normally insusceptible cells via the Fc receptor.
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Mason PW, Baxt B, Brown F, Harber J, Murdin A, and Wimmer E
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- Animals, Antibody Specificity, Aphthovirus immunology, CHO Cells, Cell Line, Cricetinae, Disease Susceptibility immunology, Fluorescent Antibody Technique, Kidney, L Cells, Mice, Neutralization Tests, Poliovirus immunology, Receptors, Fc genetics, Receptors, Virus immunology, Transfection, Antibodies, Monoclonal physiology, Aphthovirus physiology, Poliovirus physiology, Receptors, Fc physiology, Receptors, Virus physiology, Virus Replication
- Abstract
Poliovirus and foot-and-mouth disease virus (FMDV) initiate infection by binding to specific cell surface receptors, which is followed by a poorly understood disassembly process. To probe these early steps of infection, the ability of poliovirus and FMDV to infect cells following binding through an alternative receptor was examined. For these studies, a Chinese hamster ovary (CHO) cell line expressing the B2 isoform of the murine Fc receptor (FcR) was used. Both viruses were able to bind to this cell line in an antibody-dependent manner, but only FMDV was able to productively infect these cells following binding through the FcR. These results suggest that the natural poliovirus receptor has dual functions in binding and destabilizing the virus particle, whereas the putative FMDV receptor may only be necessary for virion binding. These findings are consistent with differences in virion architecture which predict a more intimate virion-receptor association for poliovirus than for FMDV.
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- 1993
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19. Construction and characterization of a poliovirus/rhinovirus antigenic hybrid.
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Altmeyer R, Murdin AD, Harber JJ, and Wimmer E
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- Amino Acid Sequence, Antibodies, Viral immunology, Antigens, Viral immunology, Base Sequence, Cloning, Molecular, DNA, Recombinant, Molecular Sequence Data, Neutralization Tests, Receptors, Virus metabolism, Antigens, Viral genetics, Poliovirus genetics, Poliovirus immunology, Rhinovirus genetics, Rhinovirus immunology
- Abstract
In order to study the properties of foreign antigenic sites expressed on poliovirus a hybrid was constructed in which neutralization antigenic site IA of poliovirus type 1 strain Mahoney [PV1(M)] was replaced by neutralization immunogenic site IA (NImIA) of human rhinovirus 14 (HRV14). The resulting hybrid was viable, but growth was impaired in comparison to PV1(M). The hybrid expressed both PV1(M) and HRV14 antigenic determinants. When inoculated into rabbits it elicited neutralizing antibodies against both PV1(M) and HRV14. Furthermore, the hybrid was efficiently neutralized by polyclonal antisera specific for either PV1(M) or HRV14 and by three out of five monoclonal antibodies directed to NImIA. The monoclonal antibodies also blocked binding of the hybrid to the cellular receptor for poliovirus. One of them is thought to neutralize rhinovirus in this manner, and it appears that NImIA is expressed in a sufficiently favorable context on the hybrid for the same mechanism to be effective. This can be interpreted to mean that the interactions between the parental viruses and their respective cellular receptors are very similar.
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- 1991
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20. Catalysis of poliovirus VP0 maturation cleavage is not mediated by serine 10 of VP2.
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Harber JJ, Bradley J, Anderson CW, and Wimmer E
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- Amino Acid Sequence, Base Sequence, Capsid metabolism, Capsid Proteins, Codon genetics, HeLa Cells metabolism, Humans, Models, Molecular, Molecular Sequence Data, Mutagenesis, Site-Directed, Oligonucleotide Probes, Poliovirus isolation & purification, Poliovirus metabolism, Protein Conformation, RNA, Viral genetics, RNA, Viral isolation & purification, Virion genetics, Capsid genetics, Poliovirus genetics, Serine
- Abstract
The maturation of the poliovirus capsid occurs as the result of a single unexplained proteolytic event during which 58 to 59 copies of the 60 VP0 capsid protein precursors are cleaved. An autocatalytic mechanism for cleavage of VP0 to VP4 and VP2 was proposed by Arnold et al. (E. Arnold, M. Luo, G. Vriend, M. G. Rossman, A. C. Palmenberg, G. D. Parks, M. J. Nicklin, and E. Wimmer, Proc. Natl. Acad. Sci. USA 84:21-25, 1987) in which serine 10 of VP2 is activated by virion RNA to catalyze VP4-VP2 processing. The hypothesis rests on the observation that a hydrogen bond was observed between serine 10 of VP2 (S2010) and the carboxyl terminus of VP4 in three mature picornaviral atomic structures: rhinovirus 14, mengovirus, and poliovirus type 1 (Mahoney). We constructed mutant viruses with cysteine (S2010C) or alanine (S2010A) replacing serine 10 of VP2; these exhibited normal proteolytic processing of VP0. While our results do not exclude an autocatalytic mechanism for the maturation cleavage, they do eliminate the conserved S2010 residue as the catalytic amino acid.
- Published
- 1991
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21. Myristoylation of the poliovirus polyprotein is required for proteolytic processing of the capsid and for viral infectivity.
- Author
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Kräusslich HG, Hölscher C, Reuer Q, Harber J, and Wimmer E
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- Alanine, Capsid metabolism, Codon genetics, Glycine, HeLa Cells metabolism, Humans, Mutation, Myristic Acid, Poliovirus pathogenicity, Poliovirus physiology, Transcription, Genetic, Virulence, Virus Replication, Capsid genetics, Myristic Acids metabolism, Poliovirus genetics, Protein Biosynthesis, Protein Processing, Post-Translational
- Abstract
The poliovirus polyprotein is cotranslationally linked to myristic acid at its amino-terminal glycine residue. We investigated the role of myristoylation in the viral replication cycle by site-directed mutagenesis of this glycine codon. Synthetic full-length RNA transcripts carrying a Gly-to-Ala mutation (G4002A) gave no infectious virus on transfection into permissive cells (HeLa). However, mutant viral RNA was replicated in the transfected cells, albeit at a reduced level. The virus-specific polypeptide P1, the precursor for the capsid proteins, was found in HeLa cells transfected with wild-type or mutant RNA, but only the wild-type P1 was myristoylated; the G4002A mutant P1 was not myristoylated. We also introduced the G4002A mutation into an in vitro transcription-translation vector encoding poliovirus P1 precursor. Processing of the mutant precursor by poliovirus-infected cell lysate (providing 3Cpro and 3CDpro activities) was severely inhibited, whereas the normally inefficient cleavage by purified 3Cpro was not affected. These results suggest that the myristic acid moiety of the P1 precursor may be required for efficient processing by 3CDpro.
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- 1990
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22. Periodic acid-Schiff stain in childhood acute lymphoblastic leukemia: lack of independent prognostic value.
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Lanham GR, Kalwinsky DK, Williams DL, Melvin SL, Harber JR, Motroni TA, and Stass SA
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- Adolescent, Bone Marrow pathology, Child, Child, Preschool, Cytogenetics, Humans, Leukemia, Lymphoid genetics, Leukemia, Lymphoid pathology, Prognosis, Regression Analysis, Risk, Histocytochemistry, Leukemia, Lymphoid metabolism, Periodic Acid-Schiff Reaction
- Abstract
The authors reviewed 250 consecutive children with ALL to determine if the periodic acid-Schiff (PAS) score was a useful, independent predictor of time to failure. PAS stains were scored from 0 to 400 and divided into low- and high-score groups using a variance-ratio test (F test) to optimize any effect of PAS on prognosis. Although the effect of PAS score considered alone approached significance for time to failure, the PAS score lost all significance when the patients were divided into standard-risk and high-risk groups on the basis of peripheral white count, central nervous system involvement, mediastinal mass, or E-rosette positivity at diagnosis. A Cox regression analysis was performed on a subgroup of 198 patients for whom cytogenetic studies were also available. The PAS score again approached the level of significance when considered alone but was of no significance after the effects of peripheral white count, pseudodiploidy, mediastinal mass, and E-rosette positivity were removed. The authors conclude that the PAS stain has no independent prognostic significance in childhood ALL.
- Published
- 1985
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23. Measures of visual closure.
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Harber JR
- Subjects
- Child, Form Perception, Humans, Learning Disabilities psychology, Perceptual Closure, Visual Perception
- Published
- 1979
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24. Clinical relevance of lymphoblast biological features in children with acute lymphoblastic leukemia.
- Author
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Kalwinsky DK, Roberson P, Dahl G, Harber J, Rivera G, Bowman WP, Pui CH, Ochs J, Abromowitch M, and Costlow ME
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- Adolescent, Adult, Analysis of Variance, Child, Child, Preschool, Combined Modality Therapy, Female, Humans, Infant, Karyotyping, Leukocyte Count, Male, Models, Biological, Phenotype, Ploidies, Prognosis, T-Lymphocytes immunology, Time Factors, Leukemia, Lymphoid genetics, Leukemia, Lymphoid pathology, Leukemia, Lymphoid therapy
- Abstract
Improvements in therapy for childhood acute lymphoblastic leukemia (ALL) have led us to reevaluate the prognostic significance of lymphoblast characteristics at diagnosis. From application of univariate and multivariate statistical methods, we determined the relationship of five blast cell features to treatment outcome in 250 patients who were enrolled in two clinical trials at this center from May 1979 through April 1982. Karyotype ploidy, lymphoblast morphology, and immunophenotype were each significantly related to prognosis as measured by time to failure, while periodic acid-Schiff reactivity and glucocorticoid receptor number lacked prognostic implication for this patient population. In addition, clinical features of initial WBC count, age, and race were also significant independent variables in predicting treatment response. By multivariate analysis, both ploidy and morphology contributed prognostic information to a clinical model based on WBC count, age, and race. If the model was adjusted for impact of ploidy, however, French-American-British morphology no longer contributed additional prognostic information. Our findings suggest that many traditional biological features used to estimate prognosis in ALL can be discarded in favor of clinical features (leukocyte count, age, and race) and cytogenetics (ploidy) for planning of future clinical trials.
- Published
- 1985
- Full Text
- View/download PDF
25. Chromosomal translocations play a unique role in influencing prognosis in childhood acute lymphoblastic leukemia.
- Author
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Williams DL, Harber J, Murphy SB, Look AT, Kalwinsky DK, Rivera G, Melvin SL, Stass S, and Dahl GV
- Subjects
- Child, Child, Preschool, Female, Humans, Leukemia, Lymphoid mortality, Male, Ploidies, Prognosis, Risk, Leukemia, Lymphoid genetics, Translocation, Genetic
- Abstract
Certain types of chromosomal abnormalities have been shown to exert strong independent influence on treatment outcome in acute lymphoblastic leukemia (ALL). To identify the changes most closely associated with prognosis, we analyzed the completely banded blast cell karyotypes of 161 children with this disease. One hundred twenty-five cases had one or more chromosomal abnormalities, with 45 showing translocations. The frequency of translocations was highest (58%) among patients with pseudodiploid karyotypes and lowest (0%) in the hyperdiploid group defined by 51 or more chromosomes. During the maximum 6-year follow-up period, 30 of the 45 patients with a translocation failed therapy, compared with only 27 of the 116 who lacked this feature. Life-table estimates of event-free survival indicate that only 14% of the translocation group will be in complete remission at 3 years. The percentages of failures associated with random and nonrandom translocations were virtually identical (68% v 65%). When entered in a Cox proportional hazards model with seven other types of chromosomal abnormalities, and then with 11 clinical and laboratory variables of known prognostic value in ALL, translocation emerged as the strongest single predictor of treatment outcome (P less than 0.0001). The model indicated that translocation increases the risk of treatment failure six times by comparison with the absence of this feature. These findings offer an explanation for the majority of early treatment failures in childhood ALL, including those previously attributed to ploidy classification.
- Published
- 1986
26. Perception and perceptual-motor integration: there is a difference.
- Author
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Harber JR
- Subjects
- Age Factors, Child, Female, Humans, Intelligence, Male, Psychological Tests, Motor Skills, Reading, Visual Perception
- Abstract
Explored the independence of perceptual and perceptual-motor performance in a group of second graders with effects of chronological age and intelligence controlled. Resulting correlation indicated that 16% of the variance of one variable is predictable from the other variable, supporting the growing evidence that these two skills are to a large degree independent.
- Published
- 1979
- Full Text
- View/download PDF
27. Suppression of lactation. A comparison of bromocriptine and prostaglandin E2.
- Author
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England MJ, Tjallinks A, Hofmeyr J, and Harber J
- Subjects
- Female, Humans, Pregnancy, Prolactin blood, Bromocriptine pharmacology, Dinoprostone pharmacology, Lactation drug effects
- Abstract
Women in the puerperium who requested lactation suppression were randomly allocated to receive bromocriptine from puerperal day 1 to 14 or prostaglandin E2 from day 3 or 4 for 24 hours. Subjectively, lactation suppression was satisfactory in all cases. Objective measurements showed a trend toward more-effective early suppression with bromocriptine. After discharge from the hospital, 3 of the 21 women who received prostaglandin E2 complained of mild breast tenderness, whereas 10 of the 22 who received bromocriptine reported severe "rebound" breast tenderness.
- Published
- 1988
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