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Knowledge of altitudinal patterns in soil C, N and P distribution is important for understanding biogeochemical processes in mountainous forests, yet the influence of slope aspects on soil stoichiometry has been largely neglected in previous studies. In this paper, a total number of 150 topsoil samples at four altitudes (3700, 3900, 4100, 4380 m a.s.l.) on sunny and shady slopes of Sygera mountains in the Southeastern Tibet were collected. Soil C, N and P contents, and pH, were measured. Soil temperature, moisture and richness of plant species were investigated at each sampling site. The results showed that: 1) in sunny slope, soil C, N and P concentrations increased with the increase in altitude, whereas soil C:N, C:P, and N:P decreased along the altitudinal gradient on s. Soil moisture was the main regulator of soil nutrition and stoichiometric ratios. 2) In shady slope, soil C and N contents had no significant difference along the altitudinal gradient except the higher values at low altitude, whereas soil P increased first and then decreased. Soil C:N increased with the increase in altitude, whereas C:P and N:P decreased first and then increased. Soil temperature and species richness were the main factors influencing soil nutrition and stoichiometric ratios. 3) Decoupling of soil C:N:P stoichiometry was observed in shady slope owing to changes in soil pH and temperature. 4) The rich contents of soil C and P were observed at two slopes along the altitudinal gradient, and high capacity of N supply existed at the topsoil in shady slope. These results suggested that slope aspect plays an important role in shaping the altitudinal pattern of soil C:N:P stoichiometry in mountainous forests.

Alzheimer's disease (AD) is an age‐related neurodegenerative disorder characterized by amyloid‐β (Aβ) deposition and neurofibrillary tangles. Although the NAD+‐dependent deacetylases SIRT1 and SIRT2 play pivotal roles in age‐related diseases, their cooperative effects in AD have not yet been elucidated. Here, we report that the SIRT2:SIRT1 ratio is elevated in the brains of aging mice and in the AD mouse models. In HT22 mouse hippocampal neuronal cells, Aβ challenge correlates with decreased SIRT1 expression, while SIRT2 expression is increased. Overexpression of SIRT1 prevents Aβ‐induced neurotoxicity. We find that SIRT1 impedes SIRT2‐mediated APP deacetylation by inhibiting the binding of SIRT2 to APP. Deletion of SIRT1 reduces APP recycling back to the cell surface and promotes APP transiting toward the endosome, thus contributing to the amyloidogenic processing of APP. Our findings define a mechanism for neuroprotection by SIRT1 through suppression of SIRT2 deacetylation, and provide a promising avenue for therapeutic intervention of AD. [ABSTRACT FROM AUTHOR]

Litsea coreana var. lanuginose is an evergreen shrub or small tree of the genus Lauraceae. The complete chloroplast genome of L. coreana var. sinensis is 152,834 bp in length, containing an LSC region of 93,789 bp, an SSC region of 18,913 bp, and a pair of inverted repeats (IRA and IRB) of 20,066 bp each. The genome encodes of 127 genes, including 81 protein-coding genes, 8 ribosomal RNA genes, 36 transfer RNA genes, and 2 pseudogenes. Most of these genes occurred in a single copy, whereas 13 genes occurred in double copies, including all rRNA, 6 tRNA, and 3 protein-coding genes. The overall GC content is 39.1%. Phylogenetic analysis of cp genomes from 29 species of Lauraceae showed that cp genomes of L. coreana var. sinensis is most related to those of L. glutinosa, Laurus nobilis, and Lindera glauca.

Nutrient resorption and stoichiometry ratios are vital indicators to explore nutrient transfer and use efficiency for plants, particularly under the condition of nutrient limitation. However, the changing rules about nutrient resorption and ecological stoichiometry homeostasis are still unclear with the development of plantations. We determined carbon (C), nitrogen (N), and phosphorus (P) concentrations in soil and in fresh and senesced needles along a chronosequence of Pinus massoniana plantations (10, 20, 30, and 36 years old) in Guizhou Province, China. We also calculated the N and P resorption efficiency (NRE and PRE, respectively) and the homeostasis coefficient. The results showed that fresh and senesced needles' C and N concentrations maintained an increasing trend, whereas their P concentrations decreased initially and subsequently increased as the plantations' ages increased. Fresh needles' N:P ratios indicated that N limitation existed before 20 years old, while P limitation appeared in the 30-year-old plantations. The NRE and PRE showed patterns of increasing initially and decreasing subsequently along the chronosequence of P. massoniana plantations, which was coupled with weak stoichiometric homeostasis to reduce nutrient deficiency. Therefore, the appropriate nutrient management measurements should be induced to promote tree growth and the sustainable development of P. massoniana plantations. [ABSTRACT FROM AUTHOR]

Camellia oleifera (Abel) is an economic tree species and one of the four largest oil plants in the world. The leaf and twig responses and plasticity indices of C. oleifera were investigated under four light regimes in Pinus massoniana understory plantations, namely, 100% light intensity (CK), 75% of CK (HL), 50% of CK (ML), and 30% of CK (LL). The morphological characteristics, biomass allocation, and physiological characteristics of C. oleifera leaves and twigs under different light regimes, as well as their plasticity indexes, were comprehensively evaluated. The results showed that leaf area, and specific leaf area, leaf total carbon, total nitrogen, total phosphorus and chlorophyll contents, and photosynthesis increased, which indicates that plants have the strongest adaptability under HL. No fruit appeared in twigs under LL and ML. The plastic morphological traits were greater than the biomass allocation and physiological traits. The plasticity of palisade/sponge tissue thickness and lower epidermis thickness were the lowest. In conclusion, C. oleifera have differences in sensitivity and regulation mechanism according to their differences in leaf morphological characteristics, biomass allocation physiological indicators, and response to light regimes. C. oleifera plants showed obvious phenotypic inhibition under CK, while they can adjust their strategies for using light energy to maintain their own growth and development under HL. The wide range of light adaptation and strong plasticity of C. oleifera may be two important reasons for its existence in heterogeneous habitats, but it needs at least 75% light regimes to complete its normal growth development and fruit setting. The study provides insights into the optimum light regimes for the improvement of the quality and efficiency of C. oleifera in P. massoniana understory plantations. [ABSTRACT FROM AUTHOR]

Four evergreen broadleaf Rhododendron spp. (Rhododendrons), namely, Rhododendron aganniphum, R. nyingchiense, R. wardii, and R. triflorum, occur in harsh subalpine habitats in the southwest Qinghai-Tibet Plateau (QTP), China. Considering that the four Rhododendrons cannot escape their unique environment, they must evolve a set of adaptations to survive, but the information is lacking. To uncover their physiological adaptation characteristics, in the present study, we monitored their physiological characteristics by determination of their seasonal variation in antioxidant enzyme activity, osmotic adjustment substrates, and carbohydrate contents, and their pigment content and photosynthetic efficiency. The results showed that superoxide dismutase (SOD), peroxidase (POD), catalase (CAT) activities and proline content of four Rhododendrons had a significant difference in autumn and were insignificant in summer. Specifically, R. aganniphum had the maximum protective enzyme activity and proline content in winter as well as chl a, b, and car contents. The values of maximal quantum yield (Fv/Fm), photochemical efficiency (ΦPSII), and non-photochemical quenching (NPQ) of four Rhododendrons were significantly higher in summer than in other seasons. The lower qP indicated the four Rhododendrons were susceptible to photoinhibition. Overall, the four Rhododendrons had similar physical characteristics in subalpine habitats. The parameters of the maximum quantum yield of photosystem II (PSII), the actual quantum yield of PSII, the non-photochemical chlorophyll fluorescence quenching, and chlorophyll a content increased in summer. Meanwhile, the protective enzyme activity and total soluble sugar content, proline content, and carotenoid content increased in spring, autumn, and winter. These results suggested that the four Rhododendrons can adapt to subalpine habitats by heat dissipation to avoid the damage of excessive radiation during the warm season while scavenging reactive oxygen and increasing the intracellular fluid concentration to avoid damage caused by chilling temperatures during the cold seasons. These findings would provide a reference for the conservation and application of these valuable ornamental evergreen broadleaf Rhododendrons, and enrich theory of plant eco-physiology in the high altitudes of the QTP. [ABSTRACT FROM AUTHOR]

Five Larix species (L. griffithii, L. speciose, L. himalaica, L. kongboensis, and L. potaninii var. australis), have survived on the Qinghai-Tibet Plateau (QTP) under specific climate conditions for decades. The lack of genomic information seriously hinders research on the evolution, conservation and ecology of these Larix resources. In this study, complete chloroplast (cp) genomes of the 5 species were assembled and compared based on next generation sequencing technology combined with polymerase chain reaction validation. The results show that the 5 cp genomes are relatively conservative in size, gene content and arrangement, and border variation. Phylogenetic analysis showed that the species are closely related as well as to seven other species of the same genus. In addition, the 5 cp genomes contained few simple sequence repeats and relatively low nucleotide variability; thus, 12 candidate polymorphic cp DNA markers will be helpful for further research on relevant population genetics. These results will provide valuable genetic information for the conservation, evolution and ecology of these species and their relatives. [ABSTRACT FROM AUTHOR]

Sophora moorcroftiana, a Leguminosae shrub species that is restricted to the arid and semi-arid regions of the Qinghai-Tibet Plateau, is an ecologically important foundation species and exhibits substantial drought tolerance in the Plateau. There are no functional genomics resources in public databases for understanding the molecular mechanism underlying the drought tolerance of S. moorcroftiana. Therefore, we performed a large-scale transcriptome sequencing of this species under drought stress using the Illumina sequencing technology. A total of 62,348,602 clean reads were obtained. The assembly of the clean reads resulted in 146,943 transcripts, including 66,026 unigenes. In the assembled sequences, 1534 transcription factors were identified and classified into 23 different common families, and 9040 SSR loci, from di- to hexa-nucleotides, whose repeat number is greater than five, were presented. In addition, we performed a gene expression profiling analysis upon dehydration treatment. The results indicated significant differences in the gene expression profiles among the control, mild stress and severe stress. In total, 4687, 5648 and 5735 genes were identified from the comparison of mild versus control, severe versus control and severe versus mild stress, respectively. Based on the differentially expressed genes, a Gene Ontology annotation analysis indicated many dehydration-relevant categories, including ‘response to water ‘stimulus’ and ‘response to water deprivation’. Meanwhile, the Kyoto Encyclopedia of Genes and Genomes pathway analysis uncovered some important pathways, such as ‘metabolic pathways’ and ‘plant hormone signal transduction’. In addition, the expression patterns of 25 putative genes that are involved in drought tolerance resulting from quantitative real-time PCR were consistent with their transcript abundance changes as identified by RNA-seq. The globally sequenced genes covered a considerable proportion of the S. moorcroftiana transcriptome, and the expression results may be useful to further extend the knowledge on the drought tolerance of this plant species that survives under Plateau conditions. [ABSTRACT FROM AUTHOR]

Aging is a primary risk factor for neurodegenerative diseases, such as Alzheimer's disease (AD). SIRT2, an NAD+(nicotinamide adenine dinucleotide)-dependent deacetylase, accumulates in the aging brain. Here, we report that, in the amyloid precursor protein (APP)/PS1 transgenic mouse model of AD, genetic deletion of SIRT2 or pharmacological inhibition of SIRT2 ameliorates cognitive impairment. We find that suppression of SIRT2 enhances acetylation of APP, which promotes non-amyloidogenic processing of APP at the cell surface, leading to increased soluble APP-α (sAPPα). We discover that lysines 132 and 134 of the major pathogenic protein β-amyloid (Aβ) precursor are acetylated and that these residues are deacetylated by SIRT2. Strikingly, exogenous expression of wild-type or an acetylation-mimic APP mutant protects cultured primary neurons from Aβ42 challenge. Our study identifies SIRT2-mediated deacetylation of APP on K132 and K134 as a regulated post-translational modification (PTM) and suggests inhibition of SIRT2 as a potential therapeutic strategy for AD. [Display omitted] • SIRT2 interacts with and deacetylates the highly conserved N terminus of APP • SIRT2 inhibition promotes APP non-amyloidogenic processing at the cell surface • Acetylation of APP-K132/134 is neuroprotective in cultured hippocampal neurons • SIRT2 inhibition improves cognitive deficiency in Alzheimer's disease mouse model Bai et al. show that SIRT2, a sirtuin deacetylase, interacts with the high-affinity ligand E1 domain of APP. Inhibition of SIRT2 has beneficial effects in APP/PS1 mice by maintaining acetylation of APP on the K132 and K134 residues, promoting production of neuroprotective sAPPα. [ABSTRACT FROM AUTHOR]

Sophora moorcroftiana (Benth.) Baker is an endemic woody species distributed in the Qinghai–Tibet Plateau (QTP), a part of the world characterized by high altitude and cold weather. In this study, the genetic diversity of S. moorcroftiana was evaluated based on 300 representative samples of 15 populations using 20 polymorphic SSR markers, and its potential distribution was predicted according to 19 bioclimatic factors using MaxEnt modeling. Results showed the population genetic diversity of S. moorcroftiana was generally not high (around 0.5), and the range of variation was small (0.437–0.539). Altitude, rather than other environmental factors, was the key factor affecting the present genetic diversity. Moreover, due to climate change in the QTP, the suitable area is increasing and will continue to increase by 48.35%, 84.44%, 101.98%, and 107.30% in the four future periods of 2030s, 2050s, 2070s, and 2090s, respectively, compared to the present, which is beneficial for S. moorcroftiana. These results will provide a theoretical basis for the development of germplasm conservation strategies for S. moorcroftiana and enrich information on the impacts of climate change on plants in the QTP. [ABSTRACT FROM AUTHOR]

Male sterility caused by stamen petalody is a key factor for a low fruit set rate and a low yield of Camellia oleifera but can serve as a useful genetic tool because it eliminates the need for artificial emasculation. However, its molecular regulation mechanism still remains unclear. In this study, transcriptome was sequenced and analyzed on two types of bud materials, stamen petalody mutants and normal materials, at six stages of stamen development based on integrated single-molecule real-time (SMRT) technology with unique molecular identifiers (UMI) and RNA-seq technology to identify the hub genes responsible for stamen petalody in C. oleifera. The results show that a large number of alternative splicing events were identified in the transcriptome. A co-expression network analysis of MADSs and all the differentially expressed genes between the mutant stamens and the normal materials showed that four MADS transcription factor genes, CoSEP3.1, CoAGL6, CoSEP3.2, and CoAP3, were predicted to be the hub genes responsible for stamen petalody. Among these four, the expression patterns of CoAGL6 and CoSEP3.2 were consistently high in the mutant samples, but relatively low in the normal samples at six stages, while the patterns of CoSEP3.1 and CoAP3 were initially low in mutants and then were upregulated during development but remained relatively high in the normal materials. Furthermore, the genes with high connectivity to the hub genes showed significantly different expression patterns between the mutant stamens and the normal materials at different stages. qRT-PCR results showed a similar expression pattern of the hub genes in the RNA-seq. These results lay a solid foundation for the directive breeding of C. oleifera varieties and provide references for the genetic breeding of ornamental Camellia varieties. [ABSTRACT FROM AUTHOR]

Pinus massoniana is the major afforestation and vegetation restoration tree in southern China, and it plays an important role in the sustainable development of plantations. However, long-term single planting of P. massoniana has resulted in the decline of soil quality and forest productivity, and a soil fertility assessment is urgently needed. We selected P. massoniana plantations of four age stages for plot investigation and sampling to determine the soil physicochemical properties, microbial diversity and composition, and enzyme activities at different soil depths. The results showed that soil total phosphorus (TP) and available phosphorus (AP) decreased with the increase of age, especially low C/N ratio and high C/P and N/P ratio in the 30-year and 36-year stands, leading to P limitation. Meanwhile, the bacterial Shannon index also decreased with the increase of age and was positively correlated with AP, NO3−-N, and pH. However, the fungal Shannon index decreased first and then increased with the increase of age; soil acid phosphatase (S-ACP) and urease activities showed a similar trend. Correlation analysis demonstrated that the increase of total organic carbon (TOC) and total nitrogen (TN) promoted the increase of fungal Shannon index, which was beneficial to the secretion of more enzymes. We found that soil physicochemical properties, microbial diversity, and enzyme activity decreased simultaneously when soil depths increased. Moreover, Acidobacteria and Basidiomycota were the most abundant bacterial and fungal communities, respectively, followed by Proteobacteria and Actinobacteria for bacteria and Ascomycota for fungi, and these microbial taxa were significantly affected by soil water content (SWC), TOC, AP, and C/P. In conclusion, this work reveals the potential correlation among soil physicochemical properties, microbial diversity and composition, and enzyme activities, and revealed potential correlations among them which will help to improve understanding of soil conditions and provide a reference for rational management of soil resources. [ABSTRACT FROM AUTHOR]

Climate change considerably affects vegetation growth and may lead to changes in vegetation distribution. Leopard-skin camphor is an endangered species, and the main raw material for hawk tea, and has various pharmacodynamic functions. Studying the potential distribution of two leopard-skin camphor varieties under climate change should assist in the effective protection of these species. We collected the distribution point data for 130 and 89 Litsea coreana Levl. var. sinensis and L. coreana Levl. var. lanuginosa, respectively, and data for 22 environmental variables. We also predicted the potential distribution of the two varieties in China using the maximum entropy (MaxEnt) model and analyzed the key environmental factors affecting their distribution. Results showed that the two varieties are mainly located in the subtropical area south of the Qinling Mountains–Huai River line in the current and future climate scenarios, and the potentially suitable area for L. coreana Levl. var. lanuginosa is larger than that of L. coreana Levl. var. sinensis. Compared with current climatic conditions, the potentially suitable areas of the two leopard-skin camphor varieties will move to high-latitude and -altitude areas and the total suitable area will increase slightly, while moderately and highly suitable areas will be significantly reduced under future climatic scenarios. For example, under a 2070-RCP8.5 (representative of a high greenhouse gas emission scenario in the 2070s) climatic scenario, the highly suitable areas of L. coreana Levl. var. sinensis and L. coreana Levl. var. lanuginosa are 6900 and 300 km2, and account for only 10.27% and 0.21% of the current area, respectively. Temperature is the key environmental factor affecting the potential distribution of the two varieties, especially the mean daily diurnal range (Bio2) and the min temperature of the coldest month (Bio6). The results can provide a reference for relevant departments in taking protective measures to prevent the decrease or extinction of the species under climate change. [ABSTRACT FROM AUTHOR]

The complete chloroplast genome ofJuniperus cedrusis a circular molecule of 127 126 bp in length with 115 single copy genes and two duplicated genes (trnI-CAUandtrnQ-UUG). The genome contains 82 protein-coding genes, four ribosomal RNA genes and 33 transfer RNA genes. In these genes, eight genes (rpl16, rpl2, rpoC1, petD, petB, ndhB, ndhAandatpF) harbor a single intron and two genes (rps12andycf3) harbor two introns. Like other sequenced chloroplast genomes of conifers, this genome does not contain canonical inverted repeats (IRs), and the overall GC content ofJ. cedruschloroplast DNA is 35%. The phylogenetic analysis revealed thatJ. cedrusis more closely related toJ. scopulorumandJ. bermudiana. [ABSTRACT FROM AUTHOR]

The complete chloroplast genome of the wildCupressus gigantea(Cupressaceae) is determined in this study. The circular genome is 128 244 bp in length with 115 single copy genes and two duplicated genes (trnI-CAUandtrnQ-UUG). This genome contains 82 protein-coding genes, four ribosomal RNA genes and 31 transfer RNA genes. In these genes, eight genes (atpF, rpoC1, ndhA, ndhB, petB, petD, rpl16andrpl2) harbor a single intron and two genes (rps12andycf3) harbor two introns. This genome does not contain canonical IRs, and the overall GC content is 34.7%. A maximum parsimony phylogenetic analysis revealed thatC. giganteaandC. sempervirensare more closely related. [ABSTRACT FROM AUTHOR]

The complete chloroplast (cp) genome of theSinopodophyllum hexandrum(Berberidaceae) was determined in this study. The circular genome is 157,940 bp in size, and comprises a pair of inverted repeat (IR) regions of 26,077 bp each, a large single-copy (LSC) region of 86,460 bp and a small single-copy (SSC) region of 19,326 bp. The GC content of the whole cp genome was 38.5%. A total of 133 genes were identified, including 88 protein-coding genes, 37 tRNA genes and eight rRNA genes. The whole cp genome consists of 114 unique genes, and 19 genes are duplicated in the IR regions. The phylogenetic analysis revealed thatS. hexandrumis closely related toNandina domesticawithin the family Berberidaceae. [ABSTRACT FROM AUTHOR]

Abstract: P21-activated kinase 4 (PAK4), a serine/threonine protein kinase, has involved in the regulation of cytoskeletal reorganization, cell proliferation, gene transcription, oncogenic transformation and cell invasion. Moreover, PAK4 overexpression, genetic amplification and mutations were detected in a variety of human tumors, which make it potential therapeutic target. In this paper we found that LCH-7749944, a novel and potent PAK4 inhibitor, effectively suppressed the proliferation of human gastric cancer cells through downregulation of PAK4/c-Src/EGFR/cyclin D1 pathway. In addition, LCH-7749944 significantly inhibited the migration and invasion of human gastric cancer cells in conjunction with concomitant blockage of PAK4/LIMK1/cofilin and PAK4/MEK-1/ERK1/2/MMP2 pathways. Interestingly, LCH-7749944 also inhibited the formation of filopodia and induced cell elongation in SGC7901 cells. Importantly, LCH-7749944 caused successful inhibition of EGFR activity due to its inhibitory effect on PAK4. Taken together, these results provided novel insights into the development of PAK4 inhibitor and potential therapeutic strategies for gastric cancer. [Copyright &y& Elsevier]

Fungi play key roles in forest ecosystems and help to shape the forest's diverse functions. However, little is known about the diversity of phyllospheric fungi or their possible relationships with fungal communities residing in different micro-environments of Pinus massoniana forests. We investigated seven different sample types: mature needles (NM), dead needles (ND), needles falling as litter (L), fermenting needles (F), humus (H), top soil (0–20 cm) (TS), and secondary soil (20–40 cm) (SS). These seven fungal communities were examined and compared with ITS amplicons using a high-throughput sequencing technique. A total of 1213 fungal operational taxonomic units (OTUs) were obtained at a 97% sequence similarity level. Distinct fungal communities were associated with different sample types. A greater number of OTUs were present in both NM and F samples than those shared by both NM and TS samples, indicating that phyllospheric fungi may play crucial roles in litter decomposition. Sixty OTUs (the core microbiome) were found in all sample types, and they may probably play different ecological roles in different sample types. These findings extend our knowledge of the fungal diversity of the phyllosphere and its possible interactions with fungal communities found in distinct forest micro-habitats. • Phyllospheric fungal diversity of Pinus massoniana was firstly investigated. • Fungal communities varied among differ micro-environments in P. massoniana forests. • Phyllospheric fungal community shared more OTUs with fermenting litter than soil. • A core microbiome composed of sixty OTUs was identified in P. massoniana forest. • The core microbiome may play a vital role in organic matter decomposition in forests, e.g., litter decomposition. [ABSTRACT FROM AUTHOR]

Competing Interests: No potential conflicts of interest are disclosed.

Oncogenic stress induces DNA damage repair (DDR) that permits escape from mitotic catastrophe and allows early precursor lesions during the evolution of cancer. SAMHD1, a dNTPase protecting cells from viral infections, has been recently found to participate in DNA damage repair process. However, its role in tumorigenesis remains largely unknown. Here, we show that SAMHD1 is up-regulated in early-stage human carcinoma tissues and cell lines under oxidative stress or genotoxic insults. We further demonstrate that de-ubiquitinating enzyme USP7 interacts with SAMHD1 and de-ubiquitinates it at lysine 421, thus stabilizing SAMHD1 protein expression for further interaction with CtIP for DDR, which promotes tumor cell survival under genotoxic stress. Furthermore, SAMHD1 levels positively correlates with USP7 in various human carcinomas, and is associated with an unfavorable survival outcome in patients who underwent chemotherapy. Moreover, USP7 inhibitor sensitizes tumor cells to chemotherapeutic agents by decreasing SAMHD1 in vitro and in vivo. These findings suggest that de-ubiquitination of SAMHD1 by USP7 promotes DDR to overcome oncogenic stress and affect chemotherapy sensitivity., (© 2023. The Author(s).)

Sophora moorcroftiana is a leguminous plant endemic to the Qinghai-Tibet Plateau. It has excellent abiotic stress tolerance and is considered an ideal species for local ecological restoration. However, the lack of genetic diversity in the seed traits of S. moorcroftiana hinders its conservation and utilization on the plateau. Therefore, in this study, genotypic variation and phenotypic correlations were estimated for nine seed traits among 15 accessions of S. moorcroftiana over two years, 2014 and 2019, respectively from 15 sample points. All traits evaluated showed significant ( P < 0.05) genotypic variation. In 2014, accession mean repeatability was high for seed perimeter, length, width, and thickness, and 100-seed weight. In 2019, mean repeatability for seed perimeter and thickness, and 100-seed weight were high. The estimates of mean repeatability for seed traits across the two years ranged from 0.382 for seed length to 0.781 for seed thickness. Pattern analysis showed that 100-seed weight was significantly positively correlated with traits such as seed perimeter, length, width, and thickness, and identified populations with breeding pool potential. In the biplot, principal components 1 and 2 explained 55.22% and 26.72% of the total variation in seed traits, respectively. These accessions could produce breeding populations for recurrent selection to develop S. moorcroftiana varieties suitable for restoring the fragile ecological environment of the Qinghai-Tibet Plateau., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Dong, Guo, Li, Li, Zuo and Long.)

Background: Chloroplast genomes are usually circular molecules, and most of them are tetrad structures with two inverted repeat (IR) regions, a large single-copy region, and a small single-copy region. IR contraction and expansion are among the genetic diversities during the evolution of plant chloroplast genomes. The only previously released tool for the visualization of junction sites of the regions does not consider the diversity of the starting point of genomes, which leads to incorrect results or even no results for the examination of IR contraction and expansion., Results: In this work, a new tool named CPJSdraw was developed for visualizing the junction sites of chloroplast genomes. CPJSdraw can format the starting point of the irregular linearized genome, correct the junction sites of IR and single-copy regions, display the tetrad structure, visualize the junction sites of any number (≥1) of chloroplast genomes, show the transcription direction of genes adjacent to junction sites, and indicate the IR expansion or contraction of chloroplast genomes., Conclusions: CPJSdraw is a software that is universal and reliable in analysis and visualization of IR expansion or contraction of chloroplast genomes. CPJSdraw has more accurate analysis and more complete functions when compared with previously released tool. CPJSdraw as a perl package and tested data are available at http://dx.doi.org/10.5281/zenodo.7669480 for English users. In addition, an online version with a Chinese interface is available at http://cloud.genepioneer.com:9929/#/tool/alltool/detail/335., Competing Interests: Lei Xu, Haidong Gao, Lei Liu, and Xiangyang Zhou are employed by Nanjing Genepioneer Biotechnologies Co., Ltd. The authors declare there are no competing interests., (©2023 Li et al.)

Progerin, a product of LMNA mutation, leads to multiple nuclear abnormalities in patients with Hutchinson-Gilford progeria syndrome (HGPS), a devastating premature aging disorder. Progerin also accumulates during physiological aging. Here, we demonstrate that impaired insulin-like growth factor 1 receptor (IGF-1R)/Akt signaling pathway results in severe growth retardation and premature aging in Zmpste24 -/- mice, a mouse model of progeria. Mechanistically, progerin mislocalizes outside of the nucleus, interacts with the IGF-1R, and down-regulates its expression, leading to inhibited mitochondrial respiration, retarded cell growth, and accelerated cellular senescence. Pharmacological treatment with the PTEN (phosphatase and tensin homolog deleted on chromosome 10) inhibitor bpV (HOpic) increases Akt activity and improves multiple abnormalities in Zmpste24-deficient mice. These findings provide previously unidentified insights into the role of progerin in regulating the IGF-1R/Akt signaling in HGPS and might be useful for treating LMNA -associated progeroid disorders.

The lamellar body (LB), a concentric structure loaded with surfactant proteins and phospholipids, is an organelle specific to type 2 alveolar epithelial cells (AT2). However, the origin of LBs has not been fully elucidated. We have previously reported that autophagy regulates Weibel-Palade bodies (WPBs) formation, and here we demonstrated that autophagy is involved in LB maturation, another lysosome-related organelle. We found that during development, LBs were transformed from autophagic vacuoles containing cytoplasmic contents such as glycogen. Fusion between LBs and autophagosomes was observed in wild-type neonate mice. Moreover, the markers of autophagic activity, microtubule-associated protein 1 light chain 3B (LC3B), largely co-localized on the limiting membrane of the LB. Both autophagy-related gene 7 ( Atg7 ) global knockout and conditional Atg7 knockdown in AT2 cells in mice led to defects in LB maturation and surfactant protein B production. Additionally, changes in autophagic activity altered LB formation and surfactant protein B production. Taken together, these results suggest that autophagy plays a critical role in the regulation of LB formation during development and the maintenance of LB homeostasis during adulthood., Competing Interests: Competing Interests: The authors have declared that no competing interest exists., (© The author(s).)

Reactive oxygen species (ROS) are generally small, short-lived and highly reactive molecules, initially thought to be a pathological role in the cell. A growing amount of evidence in recent years argues for ROS functioning as a signaling intermediate to facilitate cellular adaptation in response to pathophysiological stress through the regulation of autophagy. Autophagy is an essential cellular process that plays a crucial role in recycling cellular components and damaged organelles to eliminate sources of ROS in response to various stress conditions. A large number of studies have shown that DNA damage response (DDR) transducer ataxia-telangiectasia mutated (ATM) protein can also be activated by ROS, and its downstream signaling pathway is involved in autophagy regulation. This review aims at providing novel insight into the regulatory mechanism of ATM activated by ROS and its molecular basis for inducing autophagy, and revealing a new function that ATM can not only maintain genome homeostasis in the nucleus, but also as a ROS sensor trigger autophagy to maintain cellular homeostasis in the cytoplasm., Competing Interests: Competing Interests: The authors have declared that no competing interest exists., (© The author(s).)