35 results on '"Florian Weinberger"'
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2. Piezo2 is not an indispensable mechanosensor in murine cardiomyocytes
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Benjamin Kloth, Giulia Mearini, Florian Weinberger, Justus Stenzig, Birgit Geertz, Jutta Starbatty, Diana Lindner, Udo Schumacher, Hermann Reichenspurner, Thomas Eschenhagen, and Marc N. Hirt
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Medicine ,Science - Abstract
Abstract A short-term increase in ventricular filling leads to an immediate (Frank-Starling mechanism) and a slower (Anrep effect) rise in cardiac contractility, while long-term increased cardiac load (e.g., in arterial hypertension) decreases contractility. Whether these answers to mechanical tension are mediated by specific sensors in cardiomyocytes remains elusive. In this study, the piezo2 protein was evaluated as a potential mechanosensor. Piezo2 was found to be upregulated in various rat and mouse cardiac tissues upon mechanical or pharmacological stress. To investigate its function, C57BL/6J mice with homozygous cardiomyocyte-specific piezo2 knockout [Piezo2-KO] were created. To this end, α-MHC-Cre mice were crossed with homozygous “floxed” piezo2 mice. α-MHC-Cre mice crossed with wildtype mice served as controls [WT-Cre+]. In cardiomyocytes of Piezo2-KO mice, piezo2 mRNA was reduced by > 90% and piezo2 protein was not detectable. Piezo2-KO mice displayed no morphological abnormalities or altered cardiac function under nonstressed conditions. In a subsequent step, hearts of Piezo2-KO or WT-Cre+-mice were stressed by either three weeks of increased afterload (angiotensin II, 2.5 mg/kg/day) or one week of hypercontractility (isoprenaline, 30 mg/kg/day). As expected, angiotensin II treatment in WT-Cre+-mice resulted in higher heart and lung weight (per body weight, + 38%, + 42%), lower ejection fraction and cardiac output (− 30%, − 39%) and higher left ventricular anterior and posterior wall thickness (+ 34%, + 37%), while isoprenaline led to higher heart weight (per body weight, + 25%) and higher heart rate and cardiac output (+ 24%, + 54%). The Piezo2-KO mice reacted similarly with the exception that the angiotensin II-induced increases in wall thickness were blunted and the isoprenaline-induced increase in cardiac output was slightly less pronounced. As cardiac function was neither severely affected under basal nor under stressed conditions in Piezo2-KO mice, we conclude that piezo2 is not an indispensable mechanosensor in cardiomyocytes.
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- 2022
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3. The invasive alga Gracilaria vermiculophylla in the native northwest Pacific under ocean warming: Southern genetic consequence and northern range expansion
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Yi-Jia Liu, Kai-Le Zhong, Alexander Jueterbock, Shimada Satoshi, Han-Gil Choi, Florian Weinberger, Jorge Assis, and Zi-Min Hu
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biodiversity conservation ,climate change ,microsatellite genotyping, peripheral populations ,range limits ,genetic lineage loss ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Ocean warming is one of the most important factors in shaping the spatial distribution and genetic biodiversity of marine organisms worldwide. The northwest Pacific has been broadly illustrated as an essential seaweed diversity hotspot. However, few studies have yet investigated in this region on whether and how past and ongoing climate warming impacted the distribution and genetic pools of coastal seaweeds. Here, we chose the invasive species Gracilaria vermiculophylla as a model, and identified multiple genetic lineages in the native range through genome-scale microsatellite genotyping. Subsequently, by reconstructing decadal trends of sea surface temperature (SST) change between 1978 and 2018, we found that SST in northern Japan and the East China Sea indeed increased broadly by 0.25-0.4°C/decade. The projections of species distribution models (SDMs) under different future climate change scenarios (RCP 2.6, RCP 4.5, RCP 6.0 and RCP 8.5) indicated that a unique genetic pool of G. vermiculophylla at its current southern range limit (i.e. the South China Sea) is at high risk of disappearance, and that the populations at its current northern range limit (i.e. in Hokkaido region) will undergo poleward expansions, particularly by the year 2100. Such responses, along with this species’ limited dispersal potential, may considerably alter the contemporary distribution and genetic composition of G. vermiculophylla in the northwest Pacific, and ultimately threaten ecological services provided by this habitat-forming species and other associated functional roles.
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- 2022
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4. Elevated Temperature-Induced Epimicrobiome Shifts in an Invasive Seaweed Gracilaria vermiculophylla
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Luisa Düsedau, Yifei Ren, Minglei Hou, Martin Wahl, Zi-Min Hu, Gaoge Wang, and Florian Weinberger
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epibacterial communities ,16S rRNA gene amplicon sequencing ,elevated temperature ,Gracilaria vermiculophylla ,Biology (General) ,QH301-705.5 - Abstract
Epibacterial communities on seaweeds are affected by several abiotic factors such as temperature and acidification. Due to global warming, surface seawater temperatures are expected to increase by 0.5–5 °C in the next century. However, how epibacterial communities associated with seaweeds will respond to global warming remains unknown. In this study, we investigated the response of epibacterial communities associated with the invasive Gracilaria vermiculophylla exposed to 3 °C above ambient temperature for 4 months using a benthocosm system in Kiel, Germany, and 16S rRNA gene amplicon sequencing. The results showed that elevated temperature affected the beta-diversity of the epibacterial communities. Some potential seaweed pathogens such as Pseudoalteromonas, Vibrio, Thalassotalea, and Acinetobacter were identified as indicator genera at the elevated temperature level. Thirteen core raw amplicon sequence variants in the elevated temperature group were the same as the populations distributed over a wide geographical range, indicating that these core ASVs may play an important role in the invasive G. vermicullophylla. Overall, this study not only contributes to a better understanding of how epibacterial communities associated with G. vermiculophylla may adapt to ocean warming, but also lays the foundation for further exploration of the interactions between G. vermiculophylla and its epimicrobiota.
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- 2023
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5. In vivo grafting of large engineered heart tissue patches for cardiac repair
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Richard J. Jabbour, Thomas J. Owen, Pragati Pandey, Marina Reinsch, Brian Wang, Oisín King, Liam Steven Couch, Dafni Pantou, David S. Pitcher, Rasheda A. Chowdhury, Fotios G. Pitoulis, Balvinder S. Handa, Worrapong Kit-Anan, Filippo Perbellini, Rachel C. Myles, Daniel J. Stuckey, Michael Dunne, Mayooran Shanmuganathan, Nicholas S. Peters, Fu Siong Ng, Florian Weinberger, Cesare M. Terracciano, Godfrey L. Smith, Thomas Eschenhagen, and Sian E. Harding
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Cardiology ,Stem cells ,Medicine - Abstract
Engineered heart tissue (EHT) strategies, by combining cells within a hydrogel matrix, may be a novel therapy for heart failure. EHTs restore cardiac function in rodent injury models, but more data are needed in clinically relevant settings. Accordingly, an upscaled EHT patch (2.5 cm × 1.5 cm × 1.5 mm) consisting of up to 20 million human induced pluripotent stem cell–derived cardiomyocytes (hPSC-CMs) embedded in a fibrin-based hydrogel was developed. A rabbit myocardial infarction model was then established to test for feasibility and efficacy. Our data showed that hPSC-CMs in EHTs became more aligned over 28 days and had improved contraction kinetics and faster calcium transients. Blinded echocardiographic analysis revealed a significant improvement in function in infarcted hearts that received EHTs, along with reduction in infarct scar size by 35%. Vascularization from the host to the patch was observed at week 1 and stable to week 4, but electrical coupling between patch and host heart was not observed. In vivo telemetry recordings and ex vivo arrhythmia provocation protocols showed that the patch was not pro-arrhythmic. In summary, EHTs improved function and reduced scar size without causing arrhythmia, which may be due to the lack of electrical coupling between patch and host heart.
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- 2021
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6. Arginine:Glycine Amidinotransferase Is Essential for Creatine Supply in Mice During Chronic Hypoxia
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Juliane Hannemann, Kathrin Cordts, Anika Seniuk, Chi-un Choe, Lena Schmidt-Hutten, Jorge Duque Escobar, Florian Weinberger, Rainer Böger, and Edzard Schwedhelm
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creatine ,homoarginine ,hypoxia ,L-arginine:glycine amidinotransferase ,pulmonary hypertension ,Physiology ,QP1-981 - Abstract
Objective: Chronic hypoxia induces pulmonary and cardiovascular pathologies, including pulmonary hypertension (PH). L-arginine:glycine amidinotransferase (AGAT) is essential for homoarginine (hArg) and guanidinoacetate synthesis, the latter being converted to creatine by guanidinoacetate methyltransferase. Low hArg concentrations are associated with cardiovascular morbidity and predict mortality in patients with PH. We therefore aimed to investigate the survival and cardiac outcome of AGAT knockout (Agat−/−) mice under hypoxia and a possible rescue of the phenotype.Methods:Agat−/− mice and wild-type (WT) littermates were subjected to normoxia or normobaric hypoxia (10% oxygen) for 4 weeks. A subgroup of Agat−/− mice was supplemented with 1% creatine from weaning. Survival, hematocrit, blood lactate and glucose, heart weight-to-tibia length (HW/TL) ratio, hArg plasma concentration, and Agat and Gamt expression in lung, liver, and kidneys were evaluated.Results: After 6 h of hypoxia, blood lactate was lower in Agat−/−-mice as compared to normoxia (p < 0.001). Agat−/− mice died within 2 days of hypoxia, whereas Agat−/− mice supplemented with creatine and WT mice survived until the end of the study. In WT mice, hematocrit (74 ± 4 vs. 55 ± 2%, mean ± SD, p < 0.001) and HW/TL (9.9 ± 1.3 vs. 7.3 ± 0.7 mg/mm, p < 0.01) were higher in hypoxia, while hArg plasma concentration (0.25 ± 0.06 vs. 0.38 ± 0.12 μmol/L, p < 0.01) was lower. Agat and Gamt expressions were differentially downregulated by hypoxia in lung, liver, and kidneys.Conclusion:Agat and Gamt are downregulated in hypoxia. Agat−/− mice are nonviable in hypoxia. Creatine rescues the lethal phenotype, but it does not reduce right ventricular hypertrophy of Agat−/− mice in hypoxia.
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- 2021
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7. Geographic variation in fitness‐related traits of the bladderwrack Fucus vesiculosus along the Baltic Sea‐North Sea salinity gradient
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Francisco R. Barboza, Jonne Kotta, Florian Weinberger, Veijo Jormalainen, Patrik Kraufvelin, Markus Molis, Hendrik Schubert, Henrik Pavia, Göran M. Nylund, Lena Kautsky, Ellen Schagerström, Esther Rickert, Mahasweta Saha, Stein Fredriksen, Georg Martin, Kaire Torn, Ari Ruuskanen, and Martin Wahl
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environmental gradient ,foundation species ,Fucus vesiculosus ,intraspecific variation ,Ecology ,QH540-549.5 - Abstract
Abstract In the course of the ongoing global intensification and diversification of human pressures, the study of variation patterns of biological traits along environmental gradients can provide relevant information on the performance of species under shifting conditions. The pronounced salinity gradient, co‐occurrence of multiple stressors, and accelerated rates of change make the Baltic Sea and its transition to North Sea a suitable region for this type of study. Focusing on the bladderwrack Fucus vesiculosus, one of the main foundation species on hard‐bottoms of the Baltic Sea, we analyzed the phenotypic variation among populations occurring along 2,000 km of coasts subjected to salinities from 4 to >30 and a variety of other stressors. Morphological and biochemical traits, including palatability for grazers, were recorded at 20 stations along the Baltic Sea and four stations in the North Sea. We evaluated in a common modeling framework the relative contribution of multiple environmental drivers to the observed trait patterns. Salinity was the main and, in some cases, the only environmental driver of the geographic trait variation in F. vesiculosus. The decrease in salinity from North Sea to Baltic Sea stations was accompanied by a decline in thallus size, photosynthetic pigments, and energy storage compounds, and affected the interaction of the alga with herbivores and epibiota. For some traits, drivers that vary locally such as wave exposure, light availability or nutrient enrichment were also important. The strong genetic population structure in this macroalgae might play a role in the generation and maintenance of phenotypic patterns across geographic scales. In light of our results, the desalination process projected for the Baltic Sea could have detrimental impacts on F. vesiculosus in areas close to its tolerance limit, affecting ecosystem functions such as habitat formation, primary production, and food supply.
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- 2019
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8. Linking Ecology to Genetics to Better Understand Adaptation and Evolution: A Review in Marine Macrophytes
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Zi-Min Hu, Kai-Le Zhong, Florian Weinberger, De-Lin Duan, Stefano G. A. Draisma, and Ester A. Serrão
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adaptive genetic variation ,divergent selection ,ecological processes ,phenotypic plasticity ,ploidy diversity ,genetic consequences ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Ecological processes and intra-specific genetic diversity reciprocally affect each other. While the importance of uniting ecological variables and genetic variation to understand species’ plasticity, adaptation, and evolution is increasingly recognized, only few studies have attempted to address the intersection of population ecology and genetics using marine macrophyte as models. Representative empirical case studies on genetic diversity are reviewed that explore ecological and evolutionary processes in marine macrophytes. These include studies on environment-induced phenotypic plasticity and associated ecological adaptation; population genetic variation and structuring driven by ecological variation; and ecological consequences mediated by intraspecific and interspecific diversity. Knowledge gaps are also discussed that impede the connection of ecology and genetics in macrophytes and possible approaches to address these issues. Finally, an eco-evolutionary perspective is advocated, by incorporating structural-to-functional genomics and life cycle complexity, to increase the understanding of the adaptation and evolution of macrophytes in response to environmental heterogeneity.
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- 2020
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9. Simulated Heatwaves Lead to Upregulated Chemical Defense of a Marine Foundation Macrophyte Against Microbial Colonizers
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Chi Guan, Mahasweta Saha, and Florian Weinberger
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chemical defense ,Zostera marina ,heatwaves ,fouling ,climate extremes ,plant–climate interactions ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Climate change is characterized not only by an increase in mean temperature, but also an increase in the variability around the means causing extreme events like marine heatwaves. These events are expected to have strong influence on the ecology of marine foundation species such as the eelgrass Zostera marina. Bacterial and macroscopic foulers are ubiquitous in the marine environment; they can have detrimental impacts on macrophytes and warming is known to enhance bacterial fouling. Thus, to investigate the consequence of heatwaves on the chemical defense of eelgrass against microbial colonizers, we incubated Z. marina plants in the Kiel Outdoor Benthocosm system under ambient control conditions and two different heatwave treatments: a treatment experiencing two spring heatwaves followed by a summer heatwave, and a treatment only experiencing just the summer heatwave. The capacity to deter microbial colonizers was found to be significantly up-regulated in Z. marina from both heatwave treatments in comparison to Z. marina under control conditions, suggesting defense regulation of Z. marina in response to marine heatwaves. We conclude climate extremes such as heatwaves can trigger a regulation in the defense capacity, which could be necessary for resilience against climate change scenarios. Such dynamics in rapid regulation of defense capacity as found in this study could also apply to other host plant – microbe interactions under scenarios of ongoing climate change or extreme climate events like heatwaves.
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- 2020
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10. MtDNA-Based Phylogeography of the Red Alga Agarophyton vermiculophyllum (Gigartinales, Rhodophyta) in the Native Northwest Pacific
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Kai-Le Zhong, Xiao-Han Song, Han-Gil Choi, Shimada Satoshi, Florian Weinberger, Stefano G. A. Draisma, De-Lin Duan, and Zi-Min Hu
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Agarophyton vermiculophyllum ,cox1 ,genetic lineages ,marginal sea ,phylogeography ,red seaweed ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
The repeated transgression and regression of coastlines mediated by the late Quaternary glacial–interglacial cycles make the northwest Pacific a hot spot to study marine speciation and population diversity. The red alga Agarophyton vermiculophyllum is an ecologically important species native to the northwest Pacific, capturing considerable research interest due to its wide-range invasiveness in Europe and North America. However, the knowledge of phylogeographic structure and intraspecific genetic diversity across the entire native range was still scarce. Here, we used 1,214-bp of mitochondrial cytochrome c oxidase subunit 1 (cox1) to explore phylogeographic patterns, lineage structure, and population genetic differentiation of 48 A. vermiculophyllum populations in the northwest Pacific. Our DNA data revealed overall high haplotype diversity and low nucleotide diversity and five phylogeographically structured genetic lineages that diverged significantly from each other. S-DIVA analysis showed the ancestors of A. vermiculophyllum originating from multiple areas encompassing the Japan–Pacific coast, East and South China Seas. This combined evidence indicates that A. vermiculophyllum might have survived in multiple scattered glacial refugia during the late Quaternary climate oscillations in the northwest Pacific. Such knowledge may help to better understand how palaeoclimate interacted with contemporary environments to contribute to intraspecific genetic variation and provide a new perspective for conserving natural resource of A. vermiculophyllum in the northwest Pacific.
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- 2020
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11. Salinity and Time Can Alter Epibacterial Communities of an Invasive Seaweed
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Mahasweta Saha, Robert M. W. Ferguson, Shawn Dove, Sven Künzel, Rafael Meichssner, Sven C. Neulinger, Finn Ole Petersen, and Florian Weinberger
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salinity ,time ,invasive ,seaweed ,epibacteria ,community ,Microbiology ,QR1-502 - Abstract
The establishment of epibacterial communities is fundamental to seaweed health and fitness, in modulating ecological interactions and may also facilitate adaptation to new environments. Abiotic factors like salinity can determine bacterial abundance, growth and community composition. However, influence of salinity as a driver of epibacterial community composition (until species level) has not been investigated for seaweeds and especially under long time scales. We also do not know how abiotic stressors may influence the ‘core’ bacterial species of seaweeds. Following an initial (immediately after field collection) sampling of epibacterial community of an invasive red seaweed Agarophyton vermicullophylum, we conducted a long term mesocosm experiment for 5 months, to examine the influence of three different salinities (low, medium and high) at two different time points (3 months after start of experiment and 5 months, i.e., at the end of experiment) on the epibacterial community richness and composition of Agarophyton. Metagenomic sequencing showed that epibacterial communities changed significantly according to salinity and time points sampled. Epibacterial richness was significantly different between low and high salinities at both time points. Epibacterial richness also varied significantly between 3 months (after start of experiment) and 5 months (end of experiment) within low, medium and high salinity level. Irrespective of salinity levels and time points sampled 727 taxa consistently appeared in all Agarophyton samples hinting at the presence of core bacterial species on the surface of the alga. Our results indicate that both salinity and time can be major driving forces in structuring epibacterial communities of seaweeds with respect to richness and β-diversity. We highlight the necessity of conducting long term experiments allowing us to detect and understand epibacterial succession over time on seaweeds.
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- 2020
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12. Shifting beach wrack composition in the SW Baltic Sea and its effect on beach use
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Florian Weinberger, Swantje Sundt, Nadja Staerck, Christine Merk, Rolf Karez, and Katrin Rehdanz
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beach management ,beach user behavior ,beach wrack ,coastal eutrophication ,nuisance seaweed ,seaweed odor ,Biology (General) ,QH301-705.5 ,Ecology ,QH540-549.5 - Abstract
Beach visitors rate beach quality in large part by its appearance. Removal of natural beach litter (called beach wrack) has, therefore, high priority for beach managers in coastal areas dependent on revenues from tourism. Focusing on the German Baltic Sea coast, the amount of beach wrack has increased by a factor of approximately 3.4 between 1977 and 2012/2013. At the same time, the composition of macrophyte communities underwent a severe change from late successional stages (eelgrass and bladder wrack) toward more ephemeral communities. Correspondingly, the contribution of bladder wrack to seaweed litter alone dropped from 75% in 1977 to 18.1% today, while the contribution of ephemeral and nutrient-opportunistic seaweeds increased by a factor larger than 6.2 to approximately 44%. Such seaweed opportunists could have a higher potential for olfactorial nuisance than late successional macrophytes. To test this hypothesis, odors extracted from equal amounts of nutrient-opportunistic and non-opportunistic species that had been partially degraded under equal conditions were compared in a public survey. Participants graded the smell of opportunistic species, in particular Ceramium tenuicorne, consistently as more intense and less pleasant than the odor of non-opportunistic species. The particularly high potential of Ceramium litter and the relatively lower potential of eelgrass litter for deterrence were confirmed in field experiments. We conclude that the documented compositional shift in macrophyte communities at German Baltic Sea coasts since the onset of eutrophication has caused a shift of beach wrack composition toward species with a higher potential for olfactorial deterrence, which could explain recent concerns of beach managers about beach wrack despite the limited increase of biomass in the study area.
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- 2021
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13. Chemically Mediated Microbial 'Gardening' Capacity of a Seaweed Holobiont Is Dynamic
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Mahasweta Saha, Shawn Dove, and Florian Weinberger
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seaweed ,holobiont ,microbial gardening ,salinity ,A. vermiculophyllum ,Biology (General) ,QH301-705.5 - Abstract
Terrestrial plants are known to “garden” the microbiota of their rhizosphere via released metabolites (that can attract beneficial microbes and deter pathogenic microbes). Such a “gardening” capacity is also known to be dynamic in plants. Although microbial “gardening” has been recently demonstrated for seaweeds, we do not know whether this capacity is a dynamic property in any aquatic flora like in terrestrial plants. Here, we tested the dynamic microbial “gardening” capacity of seaweeds using the model invasive red seaweed Agarophyton vermiculophyllum. Following an initial extraction of surface-associated metabolites (immediately after field collection), we conducted a long-term mesocosm experiment for 5 months to test the effect of two different salinities (low = 8.5 and medium = 16.5) on the microbial “gardening” capacity of the alga over time. We tested “gardening” capacity of A. vermiculophyllum originating from two different salinity levels (after 5 months treatments) in settlement assays against three disease causing pathogenic bacteria and seven protective bacteria. We also compared the capacity of the alga with field-collected samples. Abiotic factors like low salinity significantly increased the capacity of the alga to deter colonization by pathogenic bacteria while medium salinity significantly decreased the capacity of the alga over time when compared to field-collected samples. However, capacity to attract beneficial bacteria significantly decreased at both tested salinity levels when compared to field-collected samples. Dynamic microbial “gardening” capacity of a seaweed to attract beneficial bacteria and deter pathogenic bacteria is demonstrated for the first time. Such a dynamic capacity as found in the current study could also be applicable to other aquatic host–microbe interactions. Our results may provide an attractive direction of research towards manipulation of salinity and other abiotic factors leading to better defended A. vermiculophyllum towards pathogenic bacteria thereby enhancing sustained production of healthy A. vermiculophyllum in farms.
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- 2020
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14. Chemical Defence of a Seagrass against Microfoulers and Its Seasonal Dynamics
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Chi Guan, Mahasweta Saha, and Florian Weinberger
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rosmarinic acid ,fouling ,epibiosis ,Zostera ,chemical defence ,seasonal fluctuation ,epibiotic bacteria ,microfouling ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
In marine environments bacterial microfoulers are an important determinant for the settlement of algal and animal macrofoulers. At the same time fouling is usually subject to seasonal fluctuation. Additionally, the seagrass Zostera marina is prone to microfouling, although this marine spermatophyte is known to be chemically defended against bacterial settlers. Spermatophytes are often capable of induced or activated defences against biological enemies such as pathogens or herbivores, but it is still unknown whether they can fine-tune their antifouling-defence according to settlement pressure. We therefore assessed the seasonality of bacterial settlement pressure, defence against microsettlers and concentrations of a previously identified defence compound, rosmarinic acid, on surfaces of Z. marina. All examined variables peaked in summer, while they tended to be lower in spring and autumn. The seasonality of defence activity and rosmarinic acid surface concentration was positively correlated with the seasonal fluctuation of fouling pressure, which suggests that Z. marina can adjust its defence level to the relatively high bacterial fouling pressure in summer. Besides of biotic factors the seasonal change of environmental factors, such as nitrogen supply, and in particular temperature, also affected the defence level, either directly or through indirect effects on the microbial settlers.
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- 2019
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15. Rescue of cardiomyopathy through U7snRNA‐mediated exon skipping in Mybpc3‐targeted knock‐in mice
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Christina Gedicke‐Hornung, Verena Behrens‐Gawlik, Silke Reischmann, Birgit Geertz, Doreen Stimpel, Florian Weinberger, Saskia Schlossarek, Guillaume Précigout, Ingke Braren, Thomas Eschenhagen, Giulia Mearini, Stéphanie Lorain, Thomas Voit, Patrick A. Dreyfus, Luis Garcia, and Lucie Carrier
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alternative splicing ,antisense oligoribonucleotide ,cardiac myosin‐binding protein‐C ,exon skipping ,hypertrophic cardiomyopathy ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Abstract Exon skipping mediated by antisense oligoribonucleotides (AON) is a promising therapeutic approach for genetic disorders, but has not yet been evaluated for cardiac diseases. We investigated the feasibility and efficacy of viral‐mediated AON transfer in a Mybpc3‐targeted knock‐in (KI) mouse model of hypertrophic cardiomyopathy (HCM). KI mice carry a homozygous G>A transition in exon 6, which results in three different aberrant mRNAs. We identified an alternative variant (Var‐4) deleted of exons 5–6 in wild‐type and KI mice. To enhance its expression and suppress aberrant mRNAs we designed AON‐5 and AON‐6 that mask splicing enhancer motifs in exons 5 and 6. AONs were inserted into modified U7 small nuclear RNA and packaged in adeno‐associated virus (AAV‐U7‐AON‐5+6). Transduction of cardiac myocytes or systemic administration of AAV‐U7‐AON‐5+6 increased Var‐4 mRNA/protein levels and reduced aberrant mRNAs. Injection of newborn KI mice abolished cardiac dysfunction and prevented left ventricular hypertrophy. Although the therapeutic effect was transient and therefore requires optimization to be maintained over an extended period, this proof‐of‐concept study paves the way towards a causal therapy of HCM.
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- 2013
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16. Conserved and species-specific oxylipin pathways in the wound-activated chemical defense of the noninvasive red alga Gracilaria chilensis and the invasive Gracilaria vermiculophylla
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Martin Rempt, Florian Weinberger, Katharina Grosser, and Georg Pohnert
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activated chemical defense ,invasive species ,oxylipins ,prostaglandins ,red algae ,regulation ,Science ,Organic chemistry ,QD241-441 - Abstract
Chemical defense of the invasive red alga Gracilaria vermiculophylla has been studied and compared to that of the noninvasive but related Gracilaria chilensis. Both species rely on a wound-activated chemical defense that makes them less attractive to the herbivorous sea snail Echinolittorina peruviana. The chemical stress response of both species was monitored by LC–ESIMS-based metabolic profiling and revealed commonalities and differences. Both algae rely on a rapid lipoxygenase mediated transformation of arachidonic acid to known and novel oxylipins. Common products are 7,8-dihydroxyeicosatetraenoic acid and a novel eicosanoid with an unusual γ-lactone moiety. Several prostaglandins were predominantly formed by the invasive species. The role of some of these metabolites was investigated by surveying the attachment of E. peruviana on artificial food containing the respective oxylipins. Both algae species are defended against this general herbivore by 7,8-dihydroxyeicosatetraenoic acid, whereas the prostaglandins and the novel oxylipins were inactive at naturally occurring concentrations. The role of different oxylipins in the invasive potential of Gracilaria spp. is discussed.
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- 2012
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17. Development and characterization of microsatellite loci for the haploid–diploid red seaweed Gracilaria vermiculophylla
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Nicole M. Kollars, Stacy A. Krueger-Hadfield, James E. Byers, Thomas W. Greig, Allan E. Strand, Florian Weinberger, and Erik E. Sotka
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Complex life cycles ,Biological invasions ,Seaweed ,Microsatellites ,Haploid-diploid ,Gracilaria vermiculophylla ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Microsatellite loci are popular molecular markers due to their resolution in distinguishing individual genotypes. However, they have rarely been used to explore the population dynamics in species with biphasic life cycles in which both haploid and diploid stages develop into independent, functional organisms. We developed microsatellite loci for the haploid–diploid red seaweed Gracilaria vermiculophylla, a widespread non-native species in coastal estuaries of the Northern hemisphere. Forty-two loci were screened for amplification and polymorphism. Nine of these loci were polymorphic across four populations of the extant range with two to eleven alleles observed. Mean observed and expected heterozygosities ranged from 0.265 to 0.527 and 0.317 to 0.387, respectively. Overall, these markers will aid in the study of the invasive history of this seaweed and further studies on the population dynamics of this important haploid–diploid primary producer.
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- 2015
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18. Defence chemistry modulation by light and temperature shifts and the resulting effects on associated epibacteria of Fucus vesiculosus.
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Mahasweta Saha, Martin Rempt, Stephanie B Stratil, Martin Wahl, Georg Pohnert, and Florian Weinberger
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Medicine ,Science - Abstract
The goals of this study were (1) to investigate whether Fucus vesiculosus regulates the production of its antifouling defence chemicals against epibacteria in response to light limitation and temperature shifts and (2) to investigate if different surface concentrations of defence compounds shape epibacterial communities. F. vesiculosus was incubated in indoor mesocosms at five different temperature conditions (5 to 25°C) and in outdoor mesocosms under six differently reduced sunlight conditions (0 to 100%), respectively. Algal surface concentrations of previously identified antifouling compounds--dimethylsulphopropionate (DMSP), fucoxanthin and proline--were determined and the bacterial community composition was characterized by in-depth sequencing of the 16S-rRNA gene. Altogether, the effect of different treatment levels upon defence compound concentrations was limited. Under all conditions DMSP alone appeared to be sufficiently concentrated to warrant for at least a partial inhibitory action against epibiotic bacteria of F. vesiculosus. In contrast, proline and fucoxanthin rarely reached the necessary concentration ranges for self-contained inhibition. Nonetheless, in both experiments along with the direct influence of temperature and light, all three compounds apparently affected the overall bacterial community composition associated with F. vesiculosus since tendencies for insensitivity towards all three compounds were observed among bacterial taxa that typically dominate those communities. Given that the concentrations of at least one of the compounds (in most cases DMSP) were always high enough to inhibit bacterial settlement, we conclude that the capacity of F. vesiculosus for such defence will hardly be compromised by shading or warming to temperatures up to 25°C.
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- 2014
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19. Metabolomic assessment of induced and activated chemical defence in the invasive red alga Gracilaria vermiculophylla.
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Göran M Nylund, Florian Weinberger, Martin Rempt, and Georg Pohnert
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Medicine ,Science - Abstract
In comparison with terrestrial plants the mechanistic knowledge of chemical defences is poor for marine macroalgae. This restricts our understanding in the chemically mediated interactions that take place between algae and other organisms. Technical advances such as metabolomics, however, enable new approaches towards the characterisation of the chemically mediated interactions of organisms with their environment. We address defence responses in the red alga Gracilaria vermiculophylla using mass spectrometry based metabolomics in combination with bioassays. Being invasive in the north Atlantic this alga is likely to possess chemical defences according to the prediction that well-defended exotics are most likely to become successful invaders in systems dominated by generalist grazers, such as marine macroalgal communities. We investigated the effect of intense herbivore feeding and simulated herbivory by mechanical wounding of the algae. Both processes led to similar changes in the metabolic profile. Feeding experiments with the generalist isopod grazer Idotea baltica showed that mechanical wounding caused a significant increase in grazer resistance. Structure elucidation of the metabolites of which some were up-regulated more than 100 times in the wounded tissue, revealed known and novel eicosanoids as major components. Among these were prostaglandins, hydroxylated fatty acids and arachidonic acid derived conjugated lactones. Bioassays with pure metabolites showed that these eicosanoids are part of the innate defence system of macroalgae, similarly to animal systems. In accordance with an induced defence mechanism application of extracts from wounded tissue caused a significant increase in grazer resistance and the up-regulation of other pathways than in the activated defence. Thus, this study suggests that G. vermiculophylla chemically deters herbivory by two lines of defence, a rapid wound-activated process followed by a slower inducible defence. By unravelling involved pathways using metabolomics this work contributes significantly to the understanding of activated and inducible defences for marine macroalgae.
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- 2011
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20. Cross-Host Protection of Marine Bacteria Against Macroalgal Disease
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Florian Weinberger, Jiasui Li, Suhelen Egan, Marwan E Majzoub, and Mahasweta Saha
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0303 health sciences ,Pseudoalteromonas arctica ,Ecology ,030306 microbiology ,Host (biology) ,Soil Science ,Zoology ,Biology ,biology.organism_classification ,medicine.disease_cause ,Thallus ,law.invention ,03 medical and health sciences ,Probiotic ,Marine bacteriophage ,Algae ,Microbial ecology ,law ,medicine ,14. Life underwater ,Pathogen ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
Despite an increasing awareness of disease impacts on both cultivated and native seaweed populations, the development of marine probiotics has been limited and predominately focused on farmed animals. Bleaching (loss of thallus pigmentation) is one of the most prevalent diseases observed in marine macroalgae. Endemic probiotic bacteria have been characterized to prevent bleaching disease in red macroalgae Agarophyton vermiculophyllum and Delisea pulchra; however, the extent to which probiotic strains provide cross-protection to non-endemic hosts and the influence of native microbiota remain unknown. Using A. vermiculophyllum as a model, we demonstrate that co-inoculation with the pathogen Pseudoalteromonas arctica G-MAN6 and D. pulchra probiotic strain Phaeobacter sp. BS52 or Pseudoalteromonas sp. PB2-1 reduced the disease risks compared to the pathogen only treatment. Moreover, non-endemic probiotics outperformed the endemic probiotic strain Ralstonia sp. G-NY6 in the presence of the host natural microbiota. This study highlights how the native microbiota can impact the effectiveness of marine probiotics and illustrates the potential of harnessing probiotics that can function across different hosts to mitigate the impact of emerging marine diseases.
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- 2022
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21. Vegetation of the supralittoral and upper sublittoral zones of the Western German Baltic Sea coast: a phytosociological study
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Dmitry Afanasyev, Florian Weinberger, Sophie Steinhagen, and Shamil Abdullin
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Plant Science ,Aquatic Science ,Ecology, Evolution, Behavior and Systematics - Abstract
Supralittoral and shallow water seaweed communities are particularly exposed to impacts such as climate change and disturbance by humans. Therefore, their classification, the study of composition, and the monitoring of their structural changes are particularly important. A phytosociological survey of the supralittoral and upper sublittoral vegetation of the South West Baltic Sea revealed eight phytobenthos communities with two variants comprising 35 taxa of macrophytes (18 taxa of Chlorophyta, 13 taxa of Rhodophyta and four taxa of Phaeophyceae, Ochrophyta). Five of the eight communities were dominated by Ulvales (Ulva intestinalis, Kornmannia leptoderma, and three Blidingia species), the other three by Fucus vesiculosus. Most Fucus vesiculosus-dominated communities contained U. intestinalis and U. linza as subdominants. Only one of the communities had until now been described as an association ( Ulvetum intestinalis Feldman 1937). The syntaxonomic composition of the investigated vegetation includes both phytocenoses with the domination of green algae ( Ulvetum intestinalis Feldman 1937 and communities of Blidingia marginata, unidentified Blidingia spp. and Kornmannia leptoderma), as well as a number of communities dominated by Fucus vesiculosus. Mainly boreal Atlantic species and cosmopolitans make up the bulk of the species in these associations.
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- 2022
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22. A potential future Fontan modification: preliminary in vitro data of a pressure-generating tube from engineered heart tissue
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Maria Köhne, Charlotta Sophie Behrens, Tim Stüdemann, Constantin von Bibra, Eva Querdel, Aya Shibamiya, Birgit Geertz, Jakob Olfe, Ida Hüners, Stefan Jockenhövel, Michael Hübler, Thomas Eschenhagen, Jörg Siegmar Sachweh, Florian Weinberger, and Daniel Biermann
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Pulmonary and Respiratory Medicine ,Fibrin ,Tissue Engineering ,Heart Ventricles ,Silicones ,Humans ,Myocytes, Cardiac ,Surgery ,General Medicine ,Cardiology and Cardiovascular Medicine - Abstract
European journal of cardio-thoracic surgery 62(2), (2022). doi:10.1093/ejcts/ezac111, Published by Oxford Univ. Press, Oxford
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- 2022
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23. Draft genome and description of Waterburya agarophytonicola gen. nov. sp. nov. (Pleurocapsales, Cyanobacteria): a seaweed symbiont
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Florian Weinberger, Sergei Shalygin, Till Bayer, and Guido Bonthond
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Cyanobacteria ,DNA, Bacterial ,Pleurocapsales ,Biology ,Microbiology ,Genome ,Holobiont ,03 medical and health sciences ,Symbiosis ,Genus ,RNA, Ribosomal, 16S ,Molecular Biology ,Gene ,Phylogeny ,030304 developmental biology ,Genetics ,0303 health sciences ,Original Paper ,Vitamin B12 ,030306 microbiology ,Gracilaria vermiculophylla ,General Medicine ,Sequence Analysis, DNA ,biology.organism_classification ,Seaweed ,Cobalamin ,Rhodophyta ,Cyanobiont - Abstract
This work introduces Waterburya agarophytonicola Bonthond and Shalygin gen. nov., sp. nov, a baeocyte producing cyanobacterium that was isolated from the rhodophyte Agarophyton vermiculophyllum (Ohmi) Gurgel et al., an invasive seaweed that has spread across the northern hemisphere. The new species genome reveals a diverse repertoire of chemotaxis and adhesion related genes, including genes coding for type IV pili assembly proteins and a high number of genes coding for filamentous hemagglutinin family (FHA) proteins. Among a genetic basis for the synthesis of siderophores, carotenoids and numerous vitamins, W. agarophytonicola is potentially capable of producing cobalamin (vitamin B12), for which A. vermiculophyllum is an auxotroph. With a taxonomic description of the genus and species and a draft genome, this study provides as a basis for future research, to uncover the nature of this geographically independent association between seaweed and cyanobiont.
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- 2021
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24. The role of host promiscuity in the invasion process of a seaweed holobiont
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Guido Bonthond, Nadja Stärck, Masahiro Nakaoka, Stacy A. Krueger-Hadfield, Till Bayer, Sven Künzel, Gaoge Wang, and Florian Weinberger
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0106 biological sciences ,Range (biology) ,ved/biology.organism_classification_rank.species ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,Article ,Invasive species ,Intraspecific competition ,Microbial ecology ,03 medical and health sciences ,Algae ,Terrestrial plant ,Humans ,Symbiosis ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,0303 health sciences ,biology ,Ecology ,Host (biology) ,ved/biology ,Microbiota ,15. Life on land ,Seaweed ,biology.organism_classification ,Holobiont ,Promiscuity ,Rhodophyta ,Molecular ecology ,Introduced Species - Abstract
Invasive species are co-introduced with microbiota from their native range and also interact with microbiota found in the novel environment to which they are introduced. Host flexibility toward microbiota, or host promiscuity, is an important trait underlying terrestrial plant invasions. To test whether host promiscuity may be important in macroalgal invasions, we experimentally simulated an invasion in a common garden setting, using the widespread invasive macroalga Agarophyton vermiculophyllum as a model invasive seaweed holobiont. After disturbing the microbiota of individuals from native and non-native populations with antibiotics, we monitored the microbial succession trajectories in the presence of a new source of microbes. Microbial communities were strongly impacted by the treatment and changed compositionally and in terms of diversity but recovered functionally by the end of the experiment in most respects. Beta-diversity in disturbed holobionts strongly decreased, indicating that different populations configure more similar –or more common– microbial communities when exposed to the same conditions. This decline in beta-diversity occurred not only more rapidly, but was also more pronounced in non-native populations, while individuals from native populations retained communities more similar to those observed in the field. This study demonstrates that microbial communities of non-native A. vermiculophyllum are more flexibly adjusted to the environment and suggests that an intraspecific increase in host promiscuity has promoted the invasion process of A. vermiculophyllum. This phenomenon may be important among invasive macroalgal holobionts in general.
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- 2021
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25. DNA barcoding of the German green supralittoral zone indicates the distribution and phenotypic plasticity of Blidingia species and reveals Blidingia cornuta sp. nov
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Florian Weinberger, Sophie Steinhagen, and Luisa Düsedau
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0106 biological sciences ,0303 health sciences ,Phenotypic plasticity ,biology ,business.industry ,010604 marine biology & hydrobiology ,Ontogeny ,Distribution (economics) ,Zoology ,Plant Science ,biology.organism_classification ,01 natural sciences ,DNA barcoding ,Supralittoral zone ,03 medical and health sciences ,Phylogeography ,Blidingia ,Tufa ,14. Life underwater ,business ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
In temperate and subarctic regions of the Northern Hemisphere, green algae of the genus Blidingia are a substantial and environment‐shaping component of the upper and mid‐supralittoral zones. However, taxonomic knowledge on these important green algae is still sparse. In the present study, the molecular diversity and distribution of Blidingia species in the German State of Schleswig‐Holstein was examined for the first time, including Baltic Sea and Wadden Sea coasts and the off‐shore island of Helgoland (Heligoland). In total, three entities were delimited by DNA barcoding, and their respective distributions were verified (in decreasing order of abundance: Blidingia marginata, Blidingia cornuta sp. nov. and Blidingia minima). Our molecular data revealed strong taxonomic discrepancies with historical species concepts, which were mainly based on morphological and ontogenetic characters. Using a combination of molecular, morphological and ontogenetic approaches, we were able to disentangle previous mis‐identifications of B. minima and demonstrate that the distribution of B. minima is more restricted than expected within the examined area. Blidingia minima, the type of the genus name Blidingia, is epitypified within this study by material collected at the type locality Helgoland. In contrast with B. minima, B. marginata shows a higher phenotypic plasticity and is more widely distributed in the study area than previously assumed. The third entity, Blidingia cornuta sp. nov., is clearly delimited from other described Blidingia species, due to unique characters in its ontogenetic development and morphology as well as by its tufA and rbcL sequences.
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- 2021
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26. Surface chemical defence of the eelgrass Zostera marina against microbial foulers
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Stefano Papazian, Delphine Parrot, Barbora Burýšková, Florian Weinberger, and Deniz Tasdemir
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Plant Leaves ,Tandem Mass Spectrometry ,Acclimatization ,Zosteraceae ,lcsh:R ,fungi ,lcsh:Medicine ,lcsh:Q ,Seawater ,lcsh:Science ,Article ,Ecosystem ,Chromatography, Liquid - Abstract
Plants rely on both mechanical and chemical defence mechanisms to protect their surfaces against microorganisms. The recently completed genome of the eelgrass Zostera marina, a marine angiosperm with fundamental importance for coastal ecosystems, showed that its re-adaptation from land to the sea has led to the loss of essential genes (for chemical communication and defence) and structural features (stomata and thick cuticle) that are typical of terrestrial plants. This study was designed to understand the molecular nature of surface protection and fouling-control strategy of eelgrass against marine epiphytic yeasts. Different surface extraction methods and comparative metabolomics by tandem mass spectrometry (LC-MS/MS) were used for targeted and untargeted identification of the metabolite profiles of the leaf surface and the whole tissue extracts. Desorption electrospray ionization-imaging mass spectrometry (DESI-IMS) coupled with traditional bioassays revealed, for the first time, the unique spatial distribution of the eelgrass surface-associated phenolics and fatty acids, as well as their differential bioactivity against the growth and settlement of epiphytic yeasts. This study provides insights into the complex chemical defence system of the eelgrass leaf surface. It suggests that surface-associated metabolites modulate biotic interactions and provide chemical defence and structural protection to eelgrass in its marine environment.
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- 2019
27. miR-21 promotes fibrosis in an acute cardiac allograft transplantation model
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Florian Weinberger, Lucas Van Aelst, Ryo Itagaki, Sandor Batkai, Fareed Ahmad, Sabrina Thum, Amit Sharma, Maria-Teresa Piccoli, Sonja Schrepfer, Jan Fiedler, Xiang Zheng, Michael Heuser, Stephane Heymans, Christine S. Falk, Thomas Thum, Reinhold Förster, Shashi Kumar Gupta, Cardiologie, RS: CARIM - R2.02 - Cardiomyopathy, and MUMC+: MA Med Staf Spec Cardiologie (9)
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0301 basic medicine ,Chemokine ,Pathology ,medicine.medical_specialty ,Heart Diseases ,Physiology ,Cardiac fibrosis ,medicine.medical_treatment ,03 medical and health sciences ,Allograft ,Fibrosis ,Physiology (medical) ,Fibrocyte ,medicine ,Animals ,Transplantation, Homologous ,Heart transplantation ,Mice, Inbred BALB C ,biology ,Interleukin-6 ,Monocyte ,Myocardium ,Graft Survival ,medicine.disease ,Allografts ,Transplantation ,Mice, Inbred C57BL ,Disease Models, Animal ,MicroRNAs ,030104 developmental biology ,medicine.anatomical_structure ,Heart failure ,biology.protein ,Heart Transplantation ,Cardiac transplantation ,Chemokines ,Cardiology and Cardiovascular Medicine ,MiRNA-21 - Abstract
Aims Cardiac transplantation is the only curative therapy for end-stage heart failure. Fibrosis is one of the major causes for impaired function of cardiac allografts. MicroRNAs, a class of small non-coding RNAs, play a critical role in the development of cardiovascular disease, but the role of microRNAs in cardiac allograft failure is not well understood. Methods and results To uncover a role of microRNAs during cardiac graft fibrosis, we generated global microRNA profiles in allogeneic (BALB/c in C57BL/6N) and isogeneic (C57BL/6N in C57BL/6N) murine hearts after transplantation. miR-21 together with cardiac fibrosis was increased in cardiac allografts compared with isografts. Likewise, patients with cardiac rejection after heart transplantation showed increased cardiac miR-21 levels. miR-21 was induced upon treatment with IL-6 in a monocyte cell line. Overexpression of miR-21 in this monocyte cell line activated a fibrotic gene programme and promoted monocyte-to-fibrocyte transition together with activation of chemokine (C-C) motif ligand 2 (monocyte chemoattractant protein 1) via the phosphatase and tensin homologue/activator protein 1 regulatory axis. In vivo , both genetic and pharmacological inhibition of miR-21 successfully reduced fibrosis and fibrocyte accumulation in cardiac allografts. Conclusion Thus, inhibition of miR-21 is a novel strategy to target fibrosis development in cardiac allografts.
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- 2016
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28. Evidence for minimal cardiogenic potential of Sca-1 positive cells in the adult mouse heart
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Lauren E. Neidig, Florian Weinberger, Nathan J. Palpant, John Mignone, Amy M. Martinson, Daniel W. Sorensen, Ingrid Bender, Natsumi Nemoto, Hans Reinecke, Lil Pabon, Jeffery D. Molkentin, Charles E. Murry, and Jop H. van Berlo
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0301 basic medicine ,education.field_of_study ,Population ,Biology ,medicine.disease ,Transplantation ,03 medical and health sciences ,030104 developmental biology ,medicine.anatomical_structure ,Cell culture ,Heart failure ,medicine ,Cancer research ,Bone marrow ,Myocardial infarction ,Progenitor cell ,Stem cell ,education - Abstract
BackgroundDespite modern pharmacotherapy, heart failure remains a major medical burden. The heart has a limited regenerative capacity, and bolstering regeneration might represent new therapeutic approaches for heart failure patients. Various progenitor cells in the heart have been proposed to have cardiomyogenic properties, but this evidence is based mostly on cell culture and transplantation studies. One population of interest is characterized by the expression of Stem Cell Antigen-1 (Sca-1). Here we tested the hypothesis that Sca-1+cells are endogenous progenitors for cardiomyocytes in the adult heart.MethodsWe evaluated the innate cardiogenic potential of Sca-1+cellsin vivoby generating a novel mouse model to genetically lineage-trace the fate of Sca-1 expressing cells. This was accomplished by introducing a tamoxifen-inducible Cre-recombinase into the Sca-1 locus (Sca-1mCm/+). Crossing this mouse line to a Cre-dependent tdTomato reporter line allowed for genetic lineage-tracing of endogenous Sca-1+cells (Sca-1mCmR26tdTomato). The frequency of Sca-1+cardiomyocytes was quantified from dispersed cell preparations and confirmed by in situ histology.ResultsWe validated the genetic lineage tracing mouse model in bone marrow and heart. Unlike previous publications suggesting significant cardiogenic potential, we found that less than 0.02% of cardiomyocytes per year were derived from Sca-1+cells in the adult heart under homeostatic conditions. At six months after myocardial infarction, we found less than 0.01% of cardiomyocytes were derived from Sca-1+cells.ConclusionOur results show that Sca-1+cells in the adult heart have minimal cardiogenic potential under homeostatic conditions or in response to myocardial infarction.
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- 2018
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29. The Identification of Source and Vector of a Prolific Marine Invader
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James E. Byers, Sarah J. Shainker, Mareike Hammann, Nicole M. Kollars, Thomas W. Greig, David C. Murray, Allan E. Strand, Ryuta Terada, Erik E. Sotka, Stacy A. Krueger-Hadfield, and Florian Weinberger
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0106 biological sciences ,Oyster ,Gracilaria vermiculophylla ,Ecology ,010604 marine biology & hydrobiology ,Northern Hemisphere ,Introduced species ,Biology ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Phylogeography ,Vector (epidemiology) ,biology.animal ,Crassostrea ,Identification (biology) ,14. Life underwater - Abstract
The source and vector of an introduced species inform its ecological and evolutionary history and may guide management that seeks to prevent future introductions. Surprisingly, few studies have successfully used genetic tools to independently inform the specific source and pathway of biological invasions. The ecological history of many introduced species, including their origins and vectors, is often based on suppositions or educated guesses. Here, we used mitochondrial and microsatellite genotyping to trace the invasion of the Asian seaweed Gracilaria vermiculophylla (Rhodophyta) along the three coastlines of the Northern Hemisphere to which it has been introduced: the western coast of North America, eastern coast of the United States and the coasts of Europe and northwest Africa. Analyzing 37 native and 53 introduced sites, we identified the Pacific coastline of northeastern Japan as the ultimate source of the Northern Hemisphere invasion. Coincidentally, most exports of the oyster Crassostrea gigas historically originated from this region and both species often grow in close proximity. Based on genetic signatures, each of the three coastlines likely received thalli directly from Japan, as well as material from another introduced coastline (i.e., a secondary invasion). Our ability to document a source region, which was enabled by a robust sampling of locations and loci that previous studies lacked, reflected strong phylogeographic structure along native coastlines. We suggest Gracilaria vermiculophylla is an important representative example of many species likely exported out of Japan by the oyster trade and its genetic signatures that may be a hallmark of oyster introduction legacies.
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- 2016
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30. Conserved and species-specific oxylipin pathways in the wound-activated chemical defense of the noninvasive red alga Gracilaria chilensis and the invasive Gracilaria vermiculophylla
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Katharina Grosser, Florian Weinberger, Martin Rempt, and Georg Pohnert
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0106 biological sciences ,oxylipins ,Red algae ,Snail ,01 natural sciences ,Full Research Paper ,invasive species ,prostaglandins ,lcsh:QD241-441 ,03 medical and health sciences ,chemistry.chemical_compound ,Lipoxygenase ,Algae ,lcsh:Organic chemistry ,biology.animal ,Botany ,14. Life underwater ,lcsh:Science ,030304 developmental biology ,red algae ,0303 health sciences ,biology ,Chemistry ,010604 marine biology & hydrobiology ,Organic Chemistry ,regulation ,Oxylipin ,biology.organism_classification ,activated chemical defense ,biology.protein ,Chemical defense ,Arachidonic acid ,lcsh:Q ,Gracilaria - Abstract
Chemical defense of the invasive red alga Gracilaria vermiculophylla has been studied and compared to that of the noninvasive but related Gracilaria chilensis. Both species rely on a wound-activated chemical defense that makes them less attractive to the herbivorous sea snail Echinolittorina peruviana. The chemical stress response of both species was monitored by LC–ESIMS-based metabolic profiling and revealed commonalities and differences. Both algae rely on a rapid lipoxygenase mediated transformation of arachidonic acid to known and novel oxylipins. Common products are 7,8-dihydroxyeicosatetraenoic acid and a novel eicosanoid with an unusual γ-lactone moiety. Several prostaglandins were predominantly formed by the invasive species. The role of some of these metabolites was investigated by surveying the attachment of E. peruviana on artificial food containing the respective oxylipins. Both algae species are defended against this general herbivore by 7,8-dihydroxyeicosatetraenoic acid, whereas the prostaglandins and the novel oxylipins were inactive at naturally occurring concentrations. The role of different oxylipins in the invasive potential of Gracilaria spp. is discussed.
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- 2012
31. Development and characterization of microsatellite loci for the haploid–diploid red seaweed Gracilaria vermiculophylla
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Allan E. Strand, Nicole M. Kollars, Florian Weinberger, James E. Byers, Thomas W. Greig, Stacy A. Krueger-Hadfield, and Erik E. Sotka
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Range (biology) ,Population ,Zoology ,lcsh:Medicine ,Marine Biology ,General Biochemistry, Genetics and Molecular Biology ,Haploid-diploid ,Algae ,Polymorphism (computer science) ,Genotype ,Genetics ,14. Life underwater ,Allele ,Biological invasions ,education ,Microsatellites ,education.field_of_study ,biology ,Ecology ,General Neuroscience ,fungi ,Gracilaria vermiculophylla ,lcsh:R ,General Medicine ,Complex life cycles ,biology.organism_classification ,Seaweed ,Evolutionary Studies ,Microsatellite ,Ploidy ,General Agricultural and Biological Sciences - Abstract
Microsatellite loci are popular molecular markers due to their resolution in distinguishing individual genotypes. However, they have rarely been used to explore the population dynamics in species with biphasic life cycles in which both haploid and diploid stages develop into independent, functional organisms. We developed microsatellite loci for the haploid–diploid red seaweed Gracilaria vermiculophylla, a widespread non-native species in coastal estuaries of the Northern hemisphere. Forty-two loci were screened for amplification and polymorphism. Nine of these loci were polymorphic across four populations of the extant range with two to eleven alleles observed. Mean observed and expected heterozygosities ranged from 0.265 to 0.527 and 0.317 to 0.387, respectively. Overall, these markers will aid in the study of the invasive history of this seaweed and further studies on the population dynamics of this important haploid–diploid primary producer.
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- 2015
32. Rescue of cardiomyopathy through U7snRNA-mediated exon skipping in Mybpc3 -targeted knock-in mice
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Giulia Mearini, Ingke Braren, Christina Gedicke-Hornung, Saskia Schlossarek, Stéphanie Lorain, Guillaume Précigout, Thomas Voit, Verena Behrens-Gawlik, Birgit Geertz, Patrick A. Dreyfus, Lucie Carrier, Florian Weinberger, Silke Reischmann, Doreen Stimpel, Luis Garcia, Thomas Eschenhagen, Universitaetsklinikum Hamburg-Eppendorf = University Medical Center Hamburg-Eppendorf [Hamburg] (UKE), German Center for Cardiovascular Research (DZHK), Berlin Institute of Health (BIH), Institut de Myologie, Université Pierre et Marie Curie - Paris 6 (UPMC)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Association française contre les myopathies (AFM-Téléthon)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), and HAL UPMC, Gestionnaire
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antisense oligoribonucleotide ,Cardiomyopathy ,030204 cardiovascular system & hematology ,Biology ,medicine.disease_cause ,Adenoviridae ,03 medical and health sciences ,Exon ,Mice ,alternative splicing ,cardiac myosin- binding protein-C ,0302 clinical medicine ,[SDV.MHEP.CSC]Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular system ,Transduction, Genetic ,Gene knockin ,RNA, Small Nuclear ,medicine ,Animals ,Humans ,Protein Isoforms ,Gene Knock-In Techniques ,RNA, Messenger ,cardiac myosin-binding protein-C ,Research Articles ,030304 developmental biology ,0303 health sciences ,Messenger RNA ,Myocardium ,Alternative splicing ,Heart ,Exons ,Genetic Therapy ,Cardiomyopathy, Hypertrophic ,medicine.disease ,hypertrophic cardiomyopathy ,Molecular biology ,Exon skipping ,3. Good health ,[SDV.MHEP.CSC] Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular system ,HEK293 Cells ,RNA splicing ,Mutation ,Cancer research ,Molecular Medicine ,Hypertrophy, Left Ventricular ,Carrier Proteins ,Oligoribonucleotides, Antisense ,exon skipping - Abstract
International audience; Exon skipping mediated by antisense oligoribonucleotides (AON) is a promising therapeutic approach for genetic disorders, but has not yet been evaluated for cardiac diseases. We investigated the feasibility and efficacy of viral-mediated AON transfer in a Mybpc3-targeted knock-in (KI) mouse model of hypertrophic cardiomyopathy (HCM). KI mice carry a homozygous G>A transition in exon 6, which results in three different aberrant mRNAs. We identified an alternative variant (Var-4) deleted of exons 5–6 in wild-type and KI mice. To enhance its expression and suppress aberrant mRNAs we designed AON-5 and AON-6 that mask splicing enhancer motifs in exons 5 and 6. AONs were inserted into modified U7 small nuclear RNA and packaged in adeno-associated virus (AAV-U7-AON-5þ6). Transduction of cardiac myocytes or systemic administration of AAV-U7-AON-5þ6 increased Var-4 mRNA/protein levels and reduced aberrant mRNAs. Injection of newborn KI mice abolished cardiac dysfunction and prevented left ventricular hypertrophy. Although the therapeutic effect was transient and therefore requires optimization to be maintained over an extended period, this proof-of-concept study paves the way towards a causal therapy of HCM.
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- 2013
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33. Phospholipases and Galactolipases Trigger Oxylipin-mediated wound –activated defence in the red alga Gracilaria chilensis against epiphytes
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Theresa Wiesemeier, Juan A. Correa, Jessica Beltrán, Georg Pohnert, Ulrich Lion, Sylvain Faugeron, Florian Weinberger, and Verónica Flores
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Magnetic Resonance Spectroscopy ,food.ingredient ,Eicosatetraenoic acid ,Phospholipase ,Biology ,Biochemistry ,Gas Chromatography-Mass Spectrometry ,chemistry.chemical_compound ,food ,Botany ,Organic Chemicals ,Molecular Biology ,chemistry.chemical_classification ,Organic Chemistry ,Fatty acid ,Galactolipids ,Oxylipin ,Acrochaetium ,chemistry ,Phospholipases ,Rhodophyta ,cardiovascular system ,Eicosanoids ,Molecular Medicine ,lipids (amino acids, peptides, and proteins) ,Arachidonic acid ,Chromatography, Thin Layer ,Epiphyte ,Carboxylic Ester Hydrolases ,Biologie - Abstract
We investigated the wound response of the commercially important red alga, Gracilaria chilensis, in order to obtain insight into its interaction with epiphytic pests. After wounding, the host releases free fatty acids as well as the hydroxylated eicosanoids, 8R-hydroxy eicosatetraenoic acid (8-HETE) and 7S,8R-dihydroxy eicosatetraenoic acid (7,8-di-HETE). While the release of free arachidonic acid and subsequent formation of 8-HETE is controlled by phospholipase A, 7,8-di-HETE production is independent of this lipase. This dihydroxylated fatty acid might be directly released from galactolipids. Physiologically relevant concentrations of oxylipins reduced spore settlement of Acrochaetium sp. (Rhodophyta, Acrochaetiaceae) and suppressed the development of hapteria in Ceramium rubrum (Rhodophyta, Ceramiaceae) when these model epiphytes were exposed to artificial surfaces that contained 8-HETE or 7,8-di-HETE. Thus, the immediate release of oxylipins can be seen as G. chilensis defence against epiphytes. ChemBioChem 2006, 7, 457 – 462 C 2006 Wiley-VCH Verlag GmbH& Co. KGaA, Weinheim 457
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- 2006
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34. Phosphatase inhibitor-1-deficient mice are protected from catecholamine-induced arrhythmias and myocardial hypertrophy.
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Ali El-Armouche, Katrin Wittköpper, Franziska Degenhardt, Florian Weinberger, Michael Didié, Ivan Melnychenko, Michael Grimm, Micha Peeck, Wolfram H. Zimmermann, Bernhard Unsöld, Gerd Hasenfuss, Dobromir Dobrev, and Thomas Eschenhagen
- Subjects
CARDIAC hypertrophy ,ARRHYTHMIA ,PROTEIN kinases ,CATECHOLAMINES ,PHOSPHATASES ,TRANSGENIC mice ,GENE expression ,PHOSPHORYLATION - Abstract
Aims Phosphatase inhibitor-1 (I-1) is a conditional amplifier of β-adrenergic signalling downstream of protein kinase A by inhibiting type-1 phosphatases only in its PKA-phosphorylated form. I-1 is downregulated in failing hearts and thus contributes to β-adrenergic desensitization. It is unclear whether this should be viewed as a predominantly adverse or protective response. Methods and results We generated transgenic mice with cardiac-specific I-1 overexpression (I-1-TG) and evaluated cardiac function and responses to catecholamines in mice with targeted disruption of the I-1 gene (I-1-KO). Both groups were compared with their wild-type (WT) littermates. I-1-TG developed cardiac hypertrophy and mild dysfunction which was accompanied by a substantial compensatory increase in PP1 abundance and activity, confounding causeâeffect relationships. I-1-KO had normal heart structure with mildly reduced sensitivity, but unchanged maximal contractile responses to β-adrenergic stimulation, both in vitro and in vivo. Notably, I-1-KO were partially protected from lethal catecholamine-induced arrhythmias and from hypertrophy and dilation induced by a 7 day infusion with the β-adrenergic agonist isoprenaline. Moreover, I-1-KO exhibited a partially preserved acute β-adrenergic response after chronic isoprenaline, which was completely absent in similarly treated WT. At the molecular level, I-1-KO showed lower steady-state phosphorylation of the cardiac ryanodine receptor/Ca2 release channel and the sarcoplasmic reticulum (SR) Ca2+ATPase-regulating protein phospholamban. These alterations may lower the propensity for diastolic Ca2 release and Ca2 uptake and thus stabilize the SR and account for the protection. Conclusion Taken together, loss of I-1 attenuates detrimental effects of catecholamines on the heart, suggesting I-1 downregulation in heart failure as a beneficial desensitization mechanism and I-1 inhibition as a potential novel strategy for heart failure treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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35. Induction of Phlorotannins and Gene Expression in the Brown Macroalga Fucus vesiculosus in Response to the Herbivore Littorina littorea.
- Author
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Emeline, Creis Bendelac, Ludovic, Delage, Laurent, Vallet, Catherine, Leblanc, Kruse, Inken, Erwan, Ar Gall, Florian, Weinberger, and Philippe, Potin
- Abstract
Mechanisms related to the induction of phlorotannin biosynthesis in marine brown algae remain poorly known. Several studies undertaken on fucoid species have shown that phlorotannins accumulate in the algae for several days or weeks after being exposed to grazing, and this is measured by direct quantification of soluble phenolic compounds. In order to investigate earlier inducible responses involved in phlorotannin metabolism, Fucus vesiculosus was studied between 6 and 72 h of grazing by the sea snail Littorina littorea. In this study, the quantification of soluble phenolic compounds was complemented by a Quantitative real-time PCR (qRT-PCR) approach applied on genes that are potentially involved in either the phlorotannin metabolism or stress responses. Soluble phlorotannin levels remained stable during the kinetics and increased significantly only after 12 h in the presence of grazers, compared to the control, before decreasing to the initial steady state for the rest of the kinetics. Under grazing conditions, the expression of vbpo, cyp450 and ast6 genes was upregulated, respectively, at 6 h, 12 h and 24 h, and cyp450 gene was downregulated after 72 h. Interestingly, the pksIII gene involved in the synthesis of phloroglucinol was overexpressed under grazing conditions after 24 h and 72 h. This study supports the hypothesis that phlorotannins are able to provide an inducible chemical defense under grazing activity, which is regulated at different stages of the stress response. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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