25 results on '"Eoin M. Scanlan"'
Search Results
2. Structural basis of the membrane intramolecular transacylase reaction responsible for lyso-form lipoprotein synthesis
- Author
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Samir Olatunji, Katherine Bowen, Chia-Ying Huang, Dietmar Weichert, Warispreet Singh, Irina G. Tikhonova, Eoin M. Scanlan, Vincent Olieric, and Martin Caffrey
- Subjects
Science - Abstract
In Gram-positive bacteria, lipoprotein intramolecular transacylase Lit produces a lipoprotein variant with less immunogenicity. As such, Lit can be viewed as a virulence factor. Here, structural and functional characterization of the enzyme provides insight into its catalytic mechanism, setting the stage for future studies of Lit as a target for new antibiotics.
- Published
- 2021
- Full Text
- View/download PDF
3. Structures of lipoprotein signal peptidase II from Staphylococcus aureus complexed with antibiotics globomycin and myxovirescin
- Author
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Samir Olatunji, Xiaoxiao Yu, Jonathan Bailey, Chia-Ying Huang, Marta Zapotoczna, Katherine Bowen, Maja Remškar, Rolf Müller, Eoin M. Scanlan, Joan A. Geoghegan, Vincent Olieric, and Martin Caffrey
- Subjects
Science - Abstract
The enzyme LspA from the human pathogen Staphylococcus aureus (MRSA) contributes to the integrity and function of the bacterial cell envelope. Here, authors provide crystal structures of LspA in complex with two natural antibiotics, which have profoundly different structures but inhibit LspA in an identical way.
- Published
- 2020
- Full Text
- View/download PDF
4. Applications of Thiol-Ene Chemistry for Peptide Science
- Author
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Mark D. Nolan and Eoin M. Scanlan
- Subjects
peptides ,bioconjugation ,radical ,thiol (-SH) ,protein ,Chemistry ,QD1-999 - Abstract
Radical thiol-ene chemistry has been demonstrated for a range of applications in peptide science, including macrocyclization, glycosylation and lipidation amongst a myriad of others. The thiol-ene reaction offers a number of advantages in this area, primarily those characteristic of “click” reactions. This provides a chemical approach to peptide modification that is compatible with aqueous conditions with high orthogonality and functional group tolerance. Additionally, the use of a chemical approach for peptide modification affords homogeneous peptides, compared to heterogeneous mixtures often obtained through biological methods. In addition to peptide modification, thiol-ene chemistry has been applied in novel approaches to biological studies through synthesis of mimetics and use in development of probes. This review will cover the range of applications of the radical-mediated thiol-ene reaction in peptide and protein science.
- Published
- 2020
- Full Text
- View/download PDF
5. Exploring chemoselective S-to-N acyl transfer reactions in synthesis and chemical biology
- Author
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Helen M. Burke, Lauren McSweeney, and Eoin M. Scanlan
- Subjects
Science - Abstract
The conversion of thioesters to amides via acyl transfer has become one of the most important synthetic techniques for the chemical synthesis and modification of proteins. This review discusses this S-to-N acyl transfer process, and highlights some of the key applications across chemistry and biology.
- Published
- 2017
- Full Text
- View/download PDF
6. Controlling the Carbon-Bio Interface via Glycan Functional Adlayers for Applications in Microbial Fuel Cell Bioanodes
- Author
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Alessandro Iannaci, Adam Myles, Timothé Philippon, Frédéric Barrière, Eoin M. Scanlan, and Paula E. Colavita
- Subjects
aryldiazonium ,functionalization ,carbon ,microbial fuel cells ,bioanodes ,electrocatalysis ,Organic chemistry ,QD241-441 - Abstract
Surface modification of electrodes with glycans was investigated as a strategy for modulating the development of electrocatalytic biofilms for microbial fuel cell applications. Covalent attachment of phenyl-mannoside and phenyl-lactoside adlayers on graphite rod electrodes was achieved via electrochemically assisted grafting of aryldiazonium cations from solution. To test the effects of the specific bio-functionalities, modified and unmodified graphite rods were used as anodes in two-chamber microbial fuel cell devices. Devices were set up with wastewater as inoculum and acetate as nutrient and their performance, in terms of output potential (open circuit and 1 kΩ load) and peak power output, was monitored over two months. The presence of glycans was found to lead to significant differences in startup times and peak power outputs. Lactosides were found to inhibit the development of biofilms when compared to bare graphite. Mannosides were found, instead, to promote exoelectrogenic biofilm adhesion and anode colonization, a finding that is supported by quartz crystal microbalance experiments in inoculum media. These differences were observed despite both adlayers possessing thickness in the nm range and similar hydrophilic character. This suggests that specific glycan-mediated bioaffinity interactions can be leveraged to direct the development of biotic electrocatalysts in bioelectrochemical systems and microbial fuel cell devices.
- Published
- 2021
- Full Text
- View/download PDF
7. Thiyl Radicals: Versatile Reactive Intermediates for Cyclization of Unsaturated Substrates
- Author
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Dylan M. Lynch and Eoin M. Scanlan
- Subjects
radical ,cyclisation ,thiyl radicals ,sulfur ,carbocyclization ,Organic chemistry ,QD241-441 - Abstract
Sulfur centered radicals are widely employed in chemical synthesis, in particular for alkene and alkyne hydrothiolation towards thioether bioconjugates. The steadfast radical chain process that enables efficient hydrothiolation has been explored in the context of cascade reactions to furnish complex molecular architectures. The use of thiyl radicals offers a much cheaper and less toxic alternative to the archetypal organotin-based radical methods. This review outlines the development of thiyl radicals as reactive intermediates for initiating carbocyclization cascades. Key developments in cascade cyclization methodology are presented and applications for natural product synthesis are discussed. The review provides a chronological account of the field, beginning in the early seventies up to very recent examples; a span of almost 50 years.
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- 2020
- Full Text
- View/download PDF
8. Synthetic Applications of Intramolecular Thiol-Ene 'Click' Reactions
- Author
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Eoin M. Scanlan, Vincent Corcé, and Aoife Malone
- Subjects
free radical ,organic synthesis ,carbohydrate ,peptide ,Organic chemistry ,QD241-441 - Abstract
The intermolecular thiol-ene reaction is emerging as a highly efficient; free-radical mediated “click” process with diverse applications in biofunctionalisation and materials science. The related intramolecular thiol-ene reactions offer significant potential for the preparation of a wide range of sulphur containing heterocycles including synthetic therapeutics such as cyclic peptides and thiosugars. Herein, we review recent advances in intramolecular thiyl-radical mediated reactions and their applications for synthetic and medicinal chemistry.
- Published
- 2014
- Full Text
- View/download PDF
9. Radical-Mediated Reactions of α-Bromo Aluminium Thioacetals, α-Bromothioesters, and Xanthates for Thiolactone Synthesis
- Author
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Ruairí O. McCourt, Fabrice Dénès, and Eoin M. Scanlan
- Subjects
radical fragmentation ,radical cyclisation ,thiyl radical ,Organic chemistry ,QD241-441 - Abstract
Thiolactones have attracted considerable attention in recent years as bioactive natural products, lead compounds for drug discovery, molecular probes, and reagents for polymerisation. We have investigated radical-mediated C-C bond forming reactions as a strategy for thiolactone synthesis. Cyclisation of an α-bromo aluminium thioacetal was investigated under radical conditions. It was found that at low temperature, a radical fragmentation and rearrangement process occurs. A putative reaction mechanism involving a previously unreported aluminium templated thiol-ene step for the rearrangement process is presented. Cyclisation reactions of α-bromo thioesters and α-xanthate thioesters under radical mediated conditions furnished the desired thiolactones in moderate yields.
- Published
- 2018
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10. Aggregation of protein therapeutics enhances their immunogenicity: causes and mitigation strategies
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Silvia Fogli, Paula E. Colavita, Mimmi L. E. Lundahl, and Eoin M. Scanlan
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0301 basic medicine ,Protein therapeutics ,business.industry ,Immunogenicity ,Protein aggregation ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Biochemistry ,03 medical and health sciences ,Chemistry ,030104 developmental biology ,0302 clinical medicine ,Drug development ,Chemistry (miscellaneous) ,030220 oncology & carcinogenesis ,Immunology ,Medicine ,business ,Adverse effect ,Molecular Biology ,Function (biology) ,Clearance ,Immune activation - Abstract
Protein aggregation in biotherapeutics has been identified to increase immunogenicity, leading to immune-mediated adverse effects, such as severe allergic responses including anaphylaxis. The induction of anti-drug antibodies (ADAs) moreover enhances drug clearance rates, and can directly block therapeutic function. In this review, identified immune activation mechanisms triggered by protein aggregates are discussed, as well as physicochemical properties of aggregates, such as size and shape, which contribute to immunogenicity. Furthermore, factors which contribute to protein stability and aggregation are considered. Lastly, with these factors in mind, we encourage an innovative and multidisciplinary approach with regard to further research in the field, with the overall aim to avoid immunogenic aggregation in future drug development., Protein aggregation of biotherapeutics increases their immunogenicity, leading to immune-mediated adverse effects. In this review we discuss immune activation pathways, causes of aggregation and mitigation strategies.
- Published
- 2021
11. Real‐Time Multi‐Photon Tracking and Bioimaging of Glycosylated Theranostic Prodrugs upon Specific Enzyme Triggered Release
- Author
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Thorfinnur Gunnlaugsson, Luke A. Marchetti, D. Clive Williams, Robert B. P. Elmes, Eoin M. Scanlan, Dylan M. Lynch, Elena Calatrava-Pérez, and Gavin J. McManus
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Chemistry ,Organic Chemistry ,Amonafide ,General Chemistry ,Prodrug ,Catalysis ,Theranostic Nanomedicine ,Endogenous enzymes ,Neoplasms ,Biophysics ,Triggered release ,Humans ,Prodrugs ,Pharmacophore ,Precision Medicine ,Cytotoxicity ,Specific enzyme - Abstract
Real-timetracking of pro drug up take, delivery and activation in vivore presents a major challenge for prodrug development. Here in, we demonstrate the use of novel glycosylated theranostics of the cancer pharmacophore Amonafide in highly-selective, enzymatic triggered release. We show that the use of endogenous enzymes for activated release of the therapeutic component can be observed, in real time, and monitored using one and two-photon bioimag-ing, offering unique insight into the prodrug pharmaco kinetic profile. Furthermore, we demonstrate that the potent cytotoxicity of Amonafide is preserved using this targeted approach.
- Published
- 2022
12. Controlling the Carbon-Bio Interface via Glycan Functional Adlayers for Applications in Microbial Fuel Cell Bioanodes
- Author
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Paula E. Colavita, Eoin M. Scanlan, Frédéric Barrière, Timothé Philippon, Adam Myles, Alessandro Iannaci, Trinity College Dublin, Institut des Sciences Chimiques de Rennes (ISCR), Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Université de Rennes (UNIV-RENNES)-Institut National des Sciences Appliquées (INSA), This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 799175 (HiBriCarbon). The results of this publication reflect only the authors’ views and the Commission is not responsible for any use that may be made of the information it contains. This publication has also emanated from research conducted with the financial support of Science Foundation Ireland under Grant No. 13/CDA/2213 and 19/FFP/6761. The authors thank the France-Ireland PHC ULYSSES programme for support, project 36028UB. F.B. thanks Rennes Métropole for the co-funding of a Quartz Crystal Microbalance. T.P. thanks Région Bretagne for the co-funding of his PhD., Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), and Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
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Microbial fuel cell ,microbial fuel cells ,Bioelectric Energy Sources ,Pharmaceutical Science ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,Electrocatalyst ,01 natural sciences ,Article ,Analytical Chemistry ,QD241-441 ,bioanodes ,Polysaccharides ,Drug Discovery ,electrocatalysis ,[CHIM]Chemical Sciences ,Graphite ,Physical and Theoretical Chemistry ,Electrodes ,carbon ,Organic Chemistry ,Adhesiveness ,Quartz crystal microbalance ,021001 nanoscience & nanotechnology ,6. Clean water ,0104 chemical sciences ,Anode ,aryldiazonium ,Chemical engineering ,chemistry ,Chemistry (miscellaneous) ,Biofilms ,Electrode ,Molecular Medicine ,Surface modification ,functionalization ,0210 nano-technology ,Carbon ,Hydrophobic and Hydrophilic Interactions ,bioelectrochemical systems - Abstract
International audience; Surface modification of electrodes with glycans was investigated as a strategy for modulating the development of electrocatalytic biofilms for microbial fuel cell applications. Covalent attachment of phenyl-mannoside and phenyl-lactoside adlayers on graphite rod electrodes was achieved via electrochemically assisted grafting of aryldiazonium cations from solution. To test the effects of the specific bio-functionalities, modified and unmodified graphite rods were used as anodes in two-chamber microbial fuel cell devices. Devices were set up with wastewater as inoculum and acetate as nutrient and their performance, in terms of output potential (open circuit and 1 kΩ load) and peak power output, was monitored over two months. The presence of glycans was found to lead to significant differences in startup times and peak power outputs. Lactosides were found to inhibit the development of biofilms when compared to bare graphite. Mannosides were found, instead, to promote exoelectrogenic biofilm adhesion and anode colonization, a finding that is supported by quartz crystal microbalance experiments in inoculum media. These differences were observed despite both adlayers possessing thickness in the nm range and similar hydrophilic character. This suggests that specific glycan-mediated bioaffinity interactions can be leveraged to direct the development of biotic electrocatalysts in bioelectrochemical systems and microbial fuel cell devices.
- Published
- 2021
- Full Text
- View/download PDF
13. Tailored glycosylated anode surfaces Addressing the exoelectrogen bacterial community via functional layers for microbial fuel cell applications
- Author
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Paula E. Colavita, Frédéric Barrière, Adam Myles, Eoin M. Scanlan, Thomas Flinois, James A. Behan, Alessandro Iannaci, Trinity College Dublin, Institut des Sciences Chimiques de Rennes (ISCR), Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Université de Rennes (UNIV-RENNES)-Institut National des Sciences Appliquées (INSA), 799175, Horizon 2020, 13/CDA/2213, Science Foundation Ireland, GOIPG/2014/399, Irish Research Council, Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), and Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
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Glycosylation ,Microbial fuel cell ,[SDV.BIO]Life Sciences [q-bio]/Biotechnology ,Bioelectric Energy Sources ,Surface Properties ,Biophysics ,02 engineering and technology ,01 natural sciences ,Exoelectrogen ,Contact angle ,Electricity ,Electrochemistry ,Surface roughness ,Physical and Theoretical Chemistry ,Electrodes ,Bacteria ,Chemistry ,Microbiota ,010401 analytical chemistry ,General Medicine ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Anode ,Chemical engineering ,Biofilms ,Electrode ,Wetting ,Cyclic voltammetry ,0210 nano-technology ,[CHIM.OTHE]Chemical Sciences/Other - Abstract
International audience; Grafting of aryldiazonium cations bearing a p-mannoside functionality over microbial fuel cell (MFC) anode materials was performed to investigate the ability of aryl-glycoside layers to regulate colonisation by biocatalytic biofilms. Covalent attachment was achieved via spontaneous reactions and via electrochemically-assisted grafting using potential step experiments. The effect of different functionalisation protocols on MFC performance is discussed in terms of changes in wettability, roughness and electrochemical response of modified electrodes. Water contact angle measurements (WCA) show that aryl-mannoside grafting yields a significant increase in hydrophilic character. Surface roughness determinations via atomic force microscopy (AFM) suggest a more disordered glycan adlayer when electrografting is used to facilitate chemisorption. MFCs were used as living sensors to successfully test the coated electrodes the response of the MFCs in terms of start-up time was accelerated when compared to that of MFC equipped with non-modified electrodes, this suggests a faster development of a mature biofilm community resulting from aryldiazonium modifications, as confirmed by cyclic voltammetry of MFC anodes. These results therefore indicate that modification with glycans offers a bioinspired route to accelerating biofilm colonisation without any adverse effects on final MFC outputs.
- Published
- 2020
- Full Text
- View/download PDF
14. Applications of Thiol-Ene Chemistry for Peptide Science
- Author
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Eoin M. Scanlan and Mark D. Nolan
- Subjects
Glycosylation ,bioconjugation ,Lipid-anchored protein ,Peptide ,02 engineering and technology ,Review ,010402 general chemistry ,01 natural sciences ,lcsh:Chemistry ,chemistry.chemical_compound ,Thiol ene chemistry ,chemistry.chemical_classification ,Peptide modification ,radical ,Aqueous solution ,Bioconjugation ,General Chemistry ,021001 nanoscience & nanotechnology ,Combinatorial chemistry ,0104 chemical sciences ,Chemistry ,chemistry ,lcsh:QD1-999 ,Functional group ,peptides ,0210 nano-technology ,protein ,thiol (-SH) - Abstract
Radical thiol-ene chemistry has been demonstrated for a range of applications in peptide science, including macrocyclisation, glycosylation and lipidation amongst a myriad of others. The thiol-ene reaction offers a number of advantages in this area, primarily those characteristic of “click” reactions. This provides a chemical approach to peptide modification that is compatible with aqueous conditions with high orthogonality and functional group tolerance. Additionally, the use of a chemical approach for peptide modification affords homogeneous peptides, compared to heterogeneous mixtures often obtained through biological methods. In addition to peptide modification, thiol-ene chemistry has been applied in novel approaches to biological studies through synthesis of mimetics and use in development of probes. This review will cover the range of applications of the radical-mediated thiol-ene reaction in peptide and protein science.
- Published
- 2020
15. Exploring chemoselective S-to-N acyl transfer reactions in synthesis and chemical biology
- Author
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Eoin M. Scanlan, Lauren McSweeney, and Helen Burke
- Subjects
chemistry.chemical_classification ,Multidisciplinary ,010405 organic chemistry ,Science ,Thioester formation ,Chemical biology ,General Physics and Astronomy ,Chemical modification ,Peptide ,General Chemistry ,Review Article ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,Chemical synthesis ,General Biochemistry, Genetics and Molecular Biology ,Molecular machine ,Transition state ,0104 chemical sciences ,chemistry ,Biochemistry ,Peptide bond ,lipids (amino acids, peptides, and proteins) - Abstract
S-to-N acyl transfer is a high-yielding chemoselective process for amide bond formation. It is widely utilized by chemists for synthetic applications, including peptide and protein synthesis, chemical modification of proteins, protein-protein ligation and the development of probes and molecular machines. Recent advances in our understanding of S-to-N acyl transfer processes in biology and innovations in methodology for thioester formation and desulfurization, together with an extension of the size of cyclic transition states, have expanded the boundaries of this process well beyond peptide ligation. As the field develops, this chemistry will play a central role in our molecular understanding of Biology., The conversion of thioesters to amides via acyl transfer has become one of the most important synthetic techniques for the chemical synthesis and modification of proteins. This review discusses this S-to-N acyl transfer process, and highlights some of the key applications across chemistry and biology.
- Published
- 2017
16. Carbon Nano-Onions as Non-Cytotoxic Carriers for Cellular Uptake of Glycopeptides and Proteins
- Author
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Marta d’Amora, Eoin M. Scanlan, Danielle Barnes, Rosaria Brescia, Viviana Maffeis, and Silvia Giordani
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biomedical applications ,Biocompatibility ,General Chemical Engineering ,carriers ,chemistry.chemical_element ,Endocytosis Pathway ,biomolecules ,Article ,lcsh:Chemistry ,General Materials Science ,Bovine serum albumin ,chemistry.chemical_classification ,biology ,Biomolecule ,fungi ,technology, industry, and agriculture ,food and beverages ,Glycopeptide ,chemistry ,lcsh:QD1-999 ,scaffolds ,biology.protein ,Biophysics ,Surface modification ,Carbon ,Intracellular ,carbon nano-onions - Abstract
Carbon nano-onions (CNOs) possess favorable properties that make them suitable for biomedical applications, including their small size, ready surface modification, and good biocompatibility. Here, we report the covalent immobilization of a synthetic glycopeptide and the protein bovine serum albumin (BSA) onto the surface of carbon nano-onions using the maleimide&ndash, thiol &ldquo, addition reaction&rdquo, The glycopeptide and BSA are readily transported inside different cell lines, together with carbon nano-onions, through the endocytosis pathway. Our results show that carbon nano-onions are excellent scaffolds for glycopeptides and proteins immobilization and act as intracellular carriers for these biomolecules. These findings open new perspectives in the application of carbon nano-onions as intracellular transporters in diverse biomedical applications.
- Published
- 2019
17. Correction: Glycosylated naphthalimides and naphthalimide Tröger's bases as fluorescent aggregation probes for Con A
- Author
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Elena, Calatrava-Pérez, Jason M, Delente, Sankarasekaran, Shanmugaraju, Chris S, Hawes, Clive D, Williams, Thorfinnur, Gunnlaugsson, and Eoin M, Scanlan
- Subjects
Organic Chemistry ,QD ,Physical and Theoretical Chemistry ,Q1 ,Biochemistry - Abstract
Correction for ‘Glycosylated naphthalimides and naphthalimide Tröger's bases as fluorescent aggregation probes for Con A’ by Elena Calatrava-Pérez et al., Org. Biomol. Chem., 2019, DOI: 10.1039/c8ob02980f.
- Published
- 2019
18. Photocatalytic Initiation of Radical Thiol–ene Reactions Using Carbon-Bi2O3 Nanocomposites
- Author
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Olivier Laethem, Adalberto Camisasca, Viviana Maffeis, Rita Petracca, Eoin M. Scanlan, Ruairí O. McCourt, Paula E. Colavita, and Silvia Giordani
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Nanocomposite ,Bioconjugation ,Materials science ,010405 organic chemistry ,Graphene ,Oxide ,chemistry.chemical_element ,010402 general chemistry ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Nanomaterials ,Catalysis ,law.invention ,chemistry.chemical_compound ,chemistry ,law ,Photocatalysis ,General Materials Science ,Carbon - Abstract
A mild, inexpensive, and general photocatalytic initiation protocol for anti-Markovnikov hydrothiolation of olefins using carbon nanomaterial/metal oxide (carbon NM-MO) composites is reported. Graphene oxide (GO), nanodiamonds (ND), and carbon nano-onions (CNO) displaying bismuth or tungsten oxide nanoparticles adhered to the surface and function as highly efficient photocatalysts for thiol–ene ligation under both UV and visible-light-mediated conditions. The straightforward catalyst preparation, excellent overall yields, ease of purification, and broad substrate scope render this a highly versatile method for bioconjugation.
- Published
- 2018
19. Rapid Access to Thiolactone Derivatives through Radical-Mediated Acyl Thiol-Ene and Acyl Thiol-Yne Cyclization
- Author
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Goar Sánchez-Sanz, Ruairí O. McCourt, Fabrice Dénès, Eoin M. Scanlan, Chimie Et Interdisciplinarité : Synthèse, Analyse, Modélisation (CEISAM), Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST), Université de Nantes (UN)-Université de Nantes (UN)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC), School of Physics & Institute for Discovery [Dublin, Ireland], and University College Dublin [Dublin] (UCD)
- Subjects
chemistry.chemical_classification ,010405 organic chemistry ,Organic Chemistry ,Kinetics ,Substrate (chemistry) ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,0104 chemical sciences ,Thiocarboxylic acid ,chemistry.chemical_compound ,chemistry ,Thiolactone ,Thiol ,Rapid access ,[CHIM]Chemical Sciences ,Physical and Theoretical Chemistry ,Ene reaction - Abstract
A new synthetic approach to thiolactones that employs an efficient acyl thiol–ene (ATE) or acyl thiol–yne (ATY) cyclization to convert unsaturated thiocarboxylic acid derivatives into thiolactones under very mild conditions is described. The high overall yields, fast kinetics, high diastereoselectivity, excellent regiocontrol, and broad substrate scope of these reaction processes render this a very useful approach for diversity-oriented synthesis and drug discovery efforts. A detailed computational rationale is provided for the observed regiocontrol.
- Published
- 2018
- Full Text
- View/download PDF
20. Conformational effects in sugar ions: spectroscopic investigations in the gas phase and in solution
- Author
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Eoin M. Scanlan, Timothy D. Vaden, Svemir Rudić, David P. Gamblin, Benjamin G. Davis, Ram Sagar, Jack Simons, Timothy D. W. Claridge, and Barbara Odell
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chemistry.chemical_classification ,Quantitative Biology::Biomolecules ,Anomeric effect ,Stereochemistry ,Chemistry ,Substituent ,Ab initio ,Protonation ,General Chemistry ,chemistry.chemical_compound ,Computational chemistry ,Density functional theory ,Infrared multiphoton dissociation ,Counterion ,Natural bond orbital - Abstract
We present direct investigations of the conformational preferences of sugars with a positively charged substituent at their anomeric centre, C-1, which display in solution, a preference for an equatorial conformation - an apparent reversal of the normal anomeric effect. The investigations focus on the protonated monosaccharide, d-xylopyranosyl imidazolium in its α and β forms, first probed in a range of different solvents through NMR measurements and then in the gas phase, free of solvent or counterion interactions, through infrared multiphoton dissociation spectroscopy. The results, when compared and discussed in the light of density functional theory, ab initio and natural bond orbital calculations, expose the possible origins of the reversed conformational preference and provide a better understanding of the factors controlling conformational choice. This journal is © The Royal Society of Chemistry 2012.
- Published
- 2016
- Full Text
- View/download PDF
21. Multi-Functionalized Carbon Nano-onions as Imaging Probes for Cancer Cells
- Author
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Silvia Giordani, Lyn Markey, Roberto Marotta, Luis Echegoyen, Kevin Flavin, Marco Frasconi, Giacomo Ceccone, Valentina Spampinato, and Eoin M. Scanlan
- Subjects
Confocal ,Nanoparticle ,Nanotechnology ,surface chemistry ,Electron ,Catalysis ,Nanomaterials ,electron microscopy ,fluorescence ,folate receptor ,nanomaterials ,Carbon ,Folate Receptor 1 ,Humans ,Microscopy, Electron, Transmission ,Nanostructures ,Onions ,Chemistry (all) ,chemistry.chemical_compound ,Transmission ,Fluorescein ,Cytotoxicity ,Microscopy ,Chemistry ,Organic Chemistry ,electron microscopy, fluorescence, folate receptor, nanomaterials, surface chemistry ,General Chemistry ,Folate receptor ,Cancer cell ,Folate receptor 1 - Abstract
Carbon-based nanomaterials have attracted much interest during the last decade for biomedical applications. Multimodal imaging probes based on carbon nano-onions (CNOs) have emerged as a platform for bioimaging because of their cell-penetration properties and minimal systemic toxicity. Here, we describe the covalent functionalization of CNOs with fluorescein and folic acid moieties for both imaging and targeting cancer cells. The modified CNOs display high brightness and photostability in aqueous solutions and their selective and rapid uptake in two different cancer cell lines without significant cytotoxicity was demonstrated. The localization of the functionalized CNOs in late-endosomes cell compartments was revealed by a correlative approach with confocal and transmission electron microscopy. Understanding the biological response of functionalized CNOs with the capability to target cancer cells and localize the nanoparticles in the cellular environment, will pave the way for the development of a new generation of imaging probes for future biomedical studies.
- Published
- 2015
22. Glycoprotein synthesis: an update
- Author
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David P. Gamblin, Benjamin G. Davis, and Eoin M. Scanlan
- Subjects
Text mining ,Models, Chemical ,Glycoprotein synthesis ,Chemistry ,business.industry ,Polysaccharides ,Monosaccharides ,Glycopeptides ,General Chemistry ,Computational biology ,business ,Glycoproteins - Abstract
A review that provides an update on an earlier review on the synthesis of glycoproteins is presented. The review focuses on highlighting key developments in the area from 2002 and provide essential information about the process. It includes specific areas of potential applications of the synthesis process to provide a detailed update. It reveals that carbohydrates continue to play a key role in the synthesis of glycoproteins. Carbohydrates are increasingly being used in synthesizing such proteins, as they are able to modify their other physiochemical properties. The review also reveals that significant developments in glycopeptide or glycoprotein synthesis are increasing the number of potential applications for such proteins. A number of biomedical researchers are developing new drug products, adopting the process of synthesizing glycoproteins.
- Published
- 2009
23. Boron: A key Element in Radical Reactions
- Author
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Andrea Brecht-Forster, Eoin M. Scanlan, Alice Beauseigneur, Arnaud-Pierre Schaffner, Philippe Renaud, Valéry Weber, Florian Montermini, Philippe Panchaud, Barbara Becattini, Davide Pozzi, Vincent Darmency, Cyril Ollivier, and Sarkunam Kandhasamy
- Subjects
Hydroboration ,chemistry ,General Chemical Engineering ,Reagent ,Radical ,Organic chemistry ,chemistry.chemical_element ,Radical initiator ,General Chemistry ,Radical disproportionation ,Cyanation ,Tin ,Boron - Abstract
Boron derivatives are becoming key reagents in radical chemistry. Here, we describe reactions where an organoboron derivative is used as a radical initiator, a chain-transfer reagent, and a radical precursor. For instance,B-alkylcatecholboranes, easily prepared by hydroboration of alkenes, represent a very efficient source of primary, secondary, and tertiary alkyl radicals. Their very high sensitivity toward oxygen- and heteroatom-centered radicals makes them particularly attractive for the development of radical chain processes such as conjugate addition, allylation, alkenylation, and alkynylation. Boron derivatives have also been used to develop an attractive new procedure for the reduction of radicals with alcohols and water. The selected examples presented here demonstrate that boron-containing reagents can efficiently replace tin derivatives in a wide range of radical reactions.
- Published
- 2007
- Full Text
- View/download PDF
24. Bioinspired electro-permeable glycans on carbon: Fouling control for sensing in complex matrices
- Author
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Éadaoin Whelan, James A. Behan, Paula E. Colavita, Alessandro Iannaci, Eoin M. Scanlan, and Adam Myles
- Subjects
Aqueous solution ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,Glassy carbon ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Redox ,0104 chemical sciences ,Contact angle ,Adsorption ,chemistry ,Chemical engineering ,General Materials Science ,0210 nano-technology ,Voltammetry ,Carbon ,Protein adsorption - Abstract
The effect of glycan adlayers on the electrochemical response of glassy carbon electrodes was studied using standard redox probes and complex aqueous matrices. Aryldiazonium cations of aryl-lactoside precursors were used to modify glassy carbon via spontaneous and electrochemically assisted covalent grafting. Contact angle and fluorescence binding using Peanut Agglutinin (PNA) as a diagnostic lectin indicate that electrografting results in adlayers with greater glycan surface density than those obtained via spontaneous reaction. X-ray photoelectron spectroscopy with a fluorinated analog confirmed that electrografting results in multilayers of cross-linked aryl-lactosides. Adsorption studies with Bovine Serum Albumin (BSA) show that aryl-lactoside adlayers minimize unspecific protein adsorption. However, no significant differences were detected between spontaneous and electrografted layers in their ability to resist protein fouling despite their differences in coverage. Voltammetry studies show that spontaneous grafting has minimal effects on the response of standard redox probes in solution, whereas electrografting results in additional charge transfer impedance arising from increased electrode passivation. Bare and lactoside-modified carbon electrodes were tested for the detection of caffeine before and after prolonged exposure to coffee solutions. Spontaneous grafting was found to result in optimal properties by imparting antifouling performance in these complex matrices while preserving fast interfacial charge transfer.
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25. Macrophage innate training induced by IL-4 and IL-13 activation enhances OXPHOS driven anti-mycobacterial responses
- Author
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Mimmi LE Lundahl, Morgane Mitermite, Dylan Gerard Ryan, Sarah Case, Niamh C Williams, Ming Yang, Roisin I Lynch, Eimear Lagan, Filipa M Lebre, Aoife L Gorman, Bojan Stojkovic, Adrian P Bracken, Christian Frezza, Frederick J Sheedy, Eoin M Scanlan, Luke AJ O'Neill, Stephen V Gordon, and Ed C Lavelle
- Subjects
macrophages ,innate immunity ,mycobacterium tuberculosis ,cytokine ,immunometabolism ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Macrophages are a highly adaptive population of innate immune cells. Polarization with IFNγ and LPS into the ‘classically activated’ M1 macrophage enhances pro-inflammatory and microbicidal responses, important for eradicating bacteria such as Mycobacterium tuberculosis. By contrast, ‘alternatively activated’ M2 macrophages, polarized with IL-4, oppose bactericidal mechanisms and allow mycobacterial growth. These activation states are accompanied by distinct metabolic profiles, where M1 macrophages favor near exclusive use of glycolysis, whereas M2 macrophages up-regulate oxidative phosphorylation (OXPHOS). Here, we demonstrate that activation with IL-4 and IL-13 counterintuitively induces protective innate memory against mycobacterial challenge. In human and murine models, prior activation with IL-4/13 enhances pro-inflammatory cytokine secretion in response to a secondary stimulation with mycobacterial ligands. In our murine model, enhanced killing capacity is also demonstrated. Despite this switch in phenotype, IL-4/13 trained murine macrophages do not demonstrate M1-typical metabolism, instead retaining heightened use of OXPHOS. Moreover, inhibition of OXPHOS with oligomycin, 2-deoxy glucose or BPTES all impeded heightened pro-inflammatory cytokine responses from IL-4/13 trained macrophages. Lastly, this work identifies that IL-10 attenuates protective IL-4/13 training, impeding pro-inflammatory and bactericidal mechanisms. In summary, this work provides new and unexpected insight into alternative macrophage activation states in the context of mycobacterial infection.
- Published
- 2022
- Full Text
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