11 results on '"Elena V. Lazareva"'
Search Results
2. Metagenomics data of microbial communities of natural organic matter from the dispersion train of sulfide tailings
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Anton V. Korzhuk, Irina N. Myagkaya, Alexei S. Rozanov, Nikita I. Ershov, Bagai-ool Yu. Saryg-ool, Victor I. Malov, Maria A. Gustaytis, Aleksandra A. Shipova, Elena V. Lazareva, and Sergey E. Peltek
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Metagenomics ,16S rRNA ,Sulfide tailings ,Natural organic matter metagenome ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Science (General) ,Q1-390 - Abstract
Below is data on the microbial diversity of natural organic matter from the Dispersion Train of Sulfide Tailings (northern Salaire Ridge, southwestern Siberia, Russia, Ursk Village). Data was obtained using 16s rRNA amplicon directed metagenomic sequencing on Illumina MiSeq. The raw sequence data used for analysis is available in NCBI under the Sequence Read Archive (SRA) with BioProject No. PRJNA670045 and SRA accession number SRX9314152, SRX9314376. The data sequences of the 16s rRNA gene are presented at the links MW142408-MW142413, MW142414-MW142447.
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- 2021
- Full Text
- View/download PDF
3. Metagenomics dataset used to characterize microbiome in water and sediments of the lake Solenoe (Novosibirsk region, Russia)
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Alla V. Bryanskaya, Aleksandra A. Shipova, Alexei S. Rozanov, Oxana A. Volkova, Elena V. Lazareva, Yulia E. Uvarova, Tatyana N. Goryachkovskaya, and Sergey E. Peltek
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Metagenomics ,Whole genome sequencing ,Next-generation sequencing ,Cyanobacterial community ,Bottom sediments ,Lake Solenoe ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Science (General) ,Q1-390 - Abstract
This is data on the microbial diversity in the floating cyanobacterial community and sediment samples from the lake Solenoe (Novosibirsk region, Russia) obtained by metagenomic methods. Such a detailed data of the microbial diversity of the Novosibirsk oblast lake ecosystem was carried out for the first time. The purpose of our work was to reveal microbial taxonomic diversity and abundance, metabolic pathways and new enzyme findings the studied lake ecosystem using the next-generation sequencing (NGS) technology and metagenomic analysis. The data was obtained using metagenomics DNA whole genome sequencing (WGS) on Illumina NextSeq and NovaSeq. The raw sequence data used for analysis is available in NCBI under the Sequence Read Archive (SRA) with the BioProjects and SRA accession numbers: PRJNA493912 (SRR7943696), PRJNA493952 (SRR7943839) and PRJNA661775 (SRR12601635, SRR12601634, SRR12601633) corresponding to floating cyanobacterial community and sediment layers samples, respectively.
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- 2021
- Full Text
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4. Diversity and Metabolism of Microbial Communities in a Hypersaline Lake along a Geochemical Gradient
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Alla V. Bryanskaya, Aleksandra A. Shipova, Alexei S. Rozanov, Oxana A. Kolpakova, Elena V. Lazareva, Yulia E. Uvarova, Vadim M. Efimov, Sergey M. Zhmodik, Oxana P. Taran, Tatyana N. Goryachkovskaya, and Sergey E. Peltek
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metagenome ,saline lake ,microbial community ,metabolic pathway ,biogeochemical cycle ,Biology (General) ,QH301-705.5 - Abstract
In the south of western Siberia (Russia), there are many unique and unexplored soda, saline, and freshwater lakes. In this study, the results are presented on microbial diversity, its metabolic potential, and their relation with a set of geochemical parameters for a hypersaline lake ecosystem in the Novosibirsk region (Oblast). The metagenomic approach used in this work allowed us to determine the composition and structure of a floating microbial community, the upper layer of silt, and the strata of bottom sediments in a natural saline lake via two bioinformatic approaches, whose results are in good agreement with each other. In the floating microbial community and in the upper layers of the bottom sediment, bacteria of the Proteobacteria (Gammaproteobacteria), Cyanobacteria, and Bacteroidetes phyla were found to predominate. The lower layers were dominated by Proteobacteria (mainly Deltaproteobacteria), Gemmatimonadetes, Firmicutes, and Archaea. Metabolic pathways were reconstructed to investigate the metabolic potential of the microbial communities and other hypothetical roles of the microbial communities in the biogeochemical cycle. Relations between different taxa of microorganisms were identified, as was their potential role in biogeochemical transformations of C, N, and S in a comparative structural analysis that included various ecological niches.
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- 2022
- Full Text
- View/download PDF
5. Metagenomics data of microbial communities of natural organic matter from the dispersion train of sulfide tailings
- Author
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Alexei S. Rozanov, Sergey E. Peltek, Victor I. Malov, M. A. Gustaytis, Elena V. Lazareva, I. N. Myagkaya, Nikita I. Ershov, Aleksandra A. Shipova, Anton V. Korzhuk, and Bagai-ool Yu. Saryg-ool
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Science (General) ,Sulfide ,Microbial diversity ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Natural organic matter ,03 medical and health sciences ,Q1-390 ,0302 clinical medicine ,16S rRNA ,Data Article ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Sulfide tailings ,Multidisciplinary ,Ecology ,Natural organic matter metagenome ,Accession number (bioinformatics) ,Amplicon ,16S ribosomal RNA ,Tailings ,chemistry ,Metagenomics ,Environmental science ,030217 neurology & neurosurgery - Abstract
Below is data on the microbial diversity of natural organic matter from the Dispersion Train of Sulfide Tailings (northern Salaire Ridge, southwestern Siberia, Russia, Ursk Village). Data was obtained using 16s rRNA amplicon directed metagenomic sequencing on Illumina MiSeq. The raw sequence data used for analysis is available in NCBI under the Sequence Read Archive (SRA) with BioProject No. PRJNA670045 and SRA accession number SRX9314152, SRX9314376. The data sequences of the 16s rRNA gene are presented at the links MW142408-MW142413, MW142414-MW142447.
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- 2021
6. Адаптация и интеграция трудовых мигрантов из Центральной Азии в России и странах Европейского союза: компаративный анализ
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Elena V. Lazareva and Elena B. Bedrina
- Subjects
MIGRATION IN THE EUROPEAN UNION ,ТРУДОВАЯ МИГРАЦИЯ ,MIGRATION IN RUSSIA ,Central asia ,LABOUR MIGRATION ,Scopus ,Scientific literature ,MIGRATION PROCESSES ,Economic situation ,Political science ,Development economics ,media_common.cataloged_instance ,European union ,MODELS OF ADAPTATION OF MIGRANTS ,Adaptation (computer science) ,General Environmental Science ,media_common ,General Social Sciences ,General Business, Management and Accounting ,Acculturation ,МИГРАНТЫ ИЗ ЦЕНТРАЛЬНОЙ АЗИИ ,МИГРАЦИОННЫЕ ПРОЦЕССЫ ,МИГРАЦИЯ В РОССИИ ,АДАПТАЦИЯ И ИНТЕГРАЦИЯ МИГРАНТОВ ,МОДЕЛИ АДАПТАЦИИ МИГРАНТОВ ,MIGRANTS FROM CENTRAL ASIA ,МИГРАЦИЯ В ЕВРОПЕЙСКИЙ СОЮЗ ,General Economics, Econometrics and Finance ,ADAPTATION AND INTEGRATION OF MIGRANTS ,Social capital - Abstract
В настоящее время в России происходит трансформация миграционных потоков, временный характер миграции меняется на постоянный. Основная доля мигрантов прибывает из стран Центральной Азии, где демографическая и экономическая ситуация приводит к долгосрочному росту потоков трудовых мигрантов. В этих условиях актуализируются вопросы их адаптации и интеграции. Исследование представляет собой обзор научной литературы, изучающей адаптационные практики трудовых мигрантов. Сравнительный анализ обусловлен важностью использования накопленного опыта европейских стран, которые проводят политику активной интеграции мигрантов. Поиск публикаций, отражающих вопросы изучения факторов и моделей адаптации трудовых мигрантов из Центральной Азии в России и странах Европейского союза, осуществлялся на площадках Scopus, Web of Science, e-Library. Выявлены возросший интерес к теме исследования, рост публикационной активности и увеличение количества совместных исследований данной проблематики представителями разных стран. В большинстве случаев исследователи отмечают роль социального капитала в адаптации мигрантов, длительность процесса аккультурации мигрантов и важность участия принимающего сообщества в этом процессе. Рассматривается опыт двусторонней адаптации в странах ЕС. По мере увеличения потока мигрантов в страны ЕС из Центральной Азии интерес западных исследователей к этой теме будет расти. Результаты исследования могут быть использованы для повышения эффективности изучения миграционных процессов. Currently, the Russian Federation is experiencing a transformation of migration flows from temporary to permanent. The largest share of migrants comes from the countries of Central Asia, where the demographic and economic situation stimulates a long-term increase in flows of labour migrants. In these conditions, it is necessary to examine issues of adaptation and integration of migrants. We review scientific literature on the adaptation practises of labour migrants. We applied the method of comparative analysis due to the importance the accumulated experience of European countries, which chose a policy of active integration. We analysed scientific publications, which are indexed in Scopus, Web of Science, E-library databases, and focused on the factors and models of adaptation of labour migrants from Central Asia in Russia and the countries of the European Union (EU). The study revealed the growing interest in the research topic, increased publication activity and joint research by representatives of different countries. In most cases, researchers note the role of social capital in the adaptation of migrants, the length of the acculturation process of migrants and the importance of participation of the host community in the process. We proposed to consider the experience of bilateral adaptation in the EU countries. As the flow of migrants to the EU countries from Central Asia increases, the interest in this topic on the part of Western researchers will grow. The research results can be used to improve efficiency in the research of migration processes. The article has been prepared with the support of Russian Foundation for Basic Research, the project No. 19–110–50312.
- Published
- 2021
7. Layered Nb-REE ores in the Tomtor Complex (Arctic Siberia): Formation conditions
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N.L. Dobretsov, Sergey M. Zhmodik, Andrey Dar’in, Alexander Tolstov, Nikolay S. Karmanov, I. S. Kirichenko, and Elena V. Lazareva
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lcsh:GE1-350 ,0211 other engineering and technologies ,Geochemistry ,02 engineering and technology ,Authigenic ,Pourbaix diagram ,010501 environmental sciences ,Phosphate ,01 natural sciences ,Hydrothermal circulation ,chemistry.chemical_compound ,chemistry ,Arctic ,Ultramafic rock ,Phase (matter) ,Monazite ,021108 energy ,lcsh:Environmental sciences ,0105 earth and related environmental sciences - Abstract
We study a unique deposit of Nb-REE ores that occur as three orebodies overlying weathered rocks of the Tomtor ultramafic alkaline-carbonatite complex in the northern Sakha Republic (Yakutia). The formation conditions of the rich Tomtor ores remain poorly constrained. Our hypothesis is that these ores, composed of detrital and authigenic minerals, were deposited in a hydrothermal lake. The Eh-pH parameters of water are reconstructed from REE distribution in ores and in monazite, with reference to results of thermodynamic calculations. The stability fields of hydrous Ce, La, and Nd phosphates in the Pourbaix diagrams are proximal in a region within a small range of pH (4-6) and Eh (-0.25 -+0.25 V). Monazite apparently formed by dehydration of the precursor phase of hydrous REE phosphate. This inference is supported by coexistence of Fe3+ and Fe2+ minerals.
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- 2019
8. Mineralogical, geochemical and isotopic (C, O, Sr) features of the unique high-grade REE-Nb ores from the Tomtor deposit (Arctic Siberia, Russia)
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N.L. Dobretsov, Sergey M. Zhmodik, Elena V. Lazareva, Viktor Ponomarchuk, and Alexander Tolstov
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lcsh:GE1-350 ,geography ,geography.geographical_feature_category ,020209 energy ,Geochemistry ,02 engineering and technology ,Massif ,010502 geochemistry & geophysics ,01 natural sciences ,Isotopic composition ,Arctic ,0202 electrical engineering, electronic engineering, information engineering ,Geology ,lcsh:Environmental sciences ,0105 earth and related environmental sciences - Abstract
The mineralogy (SEM), geochemistry (LA-ICP-MS) and isotopic composition of C, O and Sr in carbonates from uniquely high-grade REE-Nb ores of the Tomtor massif is presented. Testing of the formation conditions for uniquely high-grade ores from the Tomtor deposit was conducted.
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- 2019
9. The role of environmental factors for the composition of microbial communities of saline lakes in the Novosibirsk region (Russia)
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Alexey S. Rozanov, T. K. Malup, Sergey E. Peltek, Oxana P. Taran, A. V. Bryanskaya, V. M. Efimov, and Elena V. Lazareva
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0301 basic medicine ,Cyanobacteria ,Microbiology (medical) ,Microorganism ,030106 microbiology ,Microbial communities ,Scytonema ,Biology ,Sodium Chloride ,Microbiology ,Fluorescent in situ hybridization ,Russia ,03 medical and health sciences ,Algae ,Environmental factors ,Phylogeny ,Bacteria ,Ecology ,Research ,Biodiversity ,Plankton ,biology.organism_classification ,Archaea ,Salinity ,Lakes ,030104 developmental biology ,Metagenomics ,Saline lakes - Abstract
Background Nothing is currently known about microbial composition of saline lakes of the Novosibirsk region and its dependence on physical-chemical parameters of waters. We studied the structure of microbial communities of saline lakes of the Novosibirsk region and the effect of physical-chemical parameters of waters on microbial communities of these lakes. Results According to the ion content, the lakes were classified either as chloride or chloride-sulfate types. Water salinity ranges from 4.3 to 290 g L−1. Many diverse microbial communities were found. Filamentous and colonial Cyanobacteria of the genera Scytonema, Aphanocapsa, and/or filamentous Algae dominated in littoral communities. Spatial and temporal organization of planktonic microbial communities and the quantities of Archaea and Bacteria were investigated using fluorescent in situ hybridization. We have found that the dominant planktonic component is represented by Archaea, or, less frequently, by Bacteria. Various phylogenetic groups (Bacteria, Archaea, Algae, and Cyanobacteria) are nonuniformly distributed. The principal component analysis was used to detect environmental factors that affect microorganism abundance. We found the principal components responsible for 71.1 % of the observed variation. It was demonstrated that two-block partial least squares was a better method than principal component analysis for analysis of the data. We observed general relationships between microbial abundance and water salinity. Conclusions We have performed the first-ever study of the structure of the microbial communities of eleven saline lakes in the Novosibirsk region along with their physical-chemical parameters of waters. Our study demonstrates that saline lakes in the Novosibirsk region contain a unique microbial communities that may become a prolific source of microorganisms for fundamental and applied studies in various fields of ecology, microbiology, geochemistry, and biotechnology, and deserve further metagenomic investigation.
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- 2016
10. Mercury species in solid matter of dispersion of the Ursk tailing dispersion train (Ursk village, Kemerovo region, Russia)
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Anna Bogush, M. A. Gustaytis, Elena V. Lazareva, I. N. Myagkaya, and O. V. Shuvaeva
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chemistry.chemical_classification ,lcsh:GE1-350 ,Sulfide ,sulfide waste ,chemistry.chemical_element ,Mineralogy ,Biota ,mercury speciation ,Mercury (element) ,law.invention ,chemistry.chemical_compound ,chemistry ,law ,Environmental chemistry ,Solid matter ,Atomic absorption spectroscopy ,Methylmercury ,lcsh:Environmental sciences - Abstract
Mercury species are highly toxic, and methylmercury is the most dangerous for environment and biota. The purpose of this study is to evaluate the distribution of mercury speciations (HgX2 (were X is O, SO2 4- , Cl and et al.), CH3Hg + , HgS) in diffuse halation high-sulfide waste of piles at the Ursk massive sulfide ore deposits which are being mined since the 1940s. To determine the mercury speciation, the method of thermal analysis with atomic absorption spectrometry as detector was applied.
- Published
- 2013
11. Molecular analysis of the benthos microbial community in Zavarzin thermal spring (Uzon Caldera, Kamchatka, Russia)
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Elena V. Lazareva, Oksana P Taran, Alexey S. Rozanov, Tatiana K. Malup, Sergey M. Zhmodik, Nikolay A. Kolchanov, V. A. Ivanisenko, Sergey E. Peltek, Timofey V. Ivanisenko, A. V. Bryanskaya, and Irina A. Meshcheryakova
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Geologic Sediments ,Biology ,Kamchatka ,Microbiology ,metagenome ,Hot Springs ,Russia ,Zavarzin thermal spring ,Benthos ,Spring (hydrology) ,Genetics ,Microbial mat ,geography ,Minerals ,geography.geographical_feature_category ,Bacteria ,Ecology ,Research ,Plankton ,biology.organism_classification ,Elements ,Archaea ,Uzon Caldera ,Microbial population biology ,Benthic zone ,Metagenomics ,Biotechnology - Abstract
Background Geothermal areas are of great interest for the study of microbial communities. The results of such investigations can be used in a variety of fields (ecology, microbiology, medicine) to answer fundamental questions, as well as those with practical benefits. Uzon caldera is located in the Uzon-Geyser depression that is situated in the centre of the Karym-Semyachin region of the East Kamchatka graben-synclinorium. The microbial communities of Zavarzin spring are well studied; however, its benthic microbial mat has not been previously described. Results Pyrosequencing of the V3 region of the 16S rRNA gene was used to study the benthic microbial community of the Zavarzin thermal spring (Uzon Caldera, Kamchatka). The community is dominated by bacteria (>95% of all sequences), including thermophilic, chemoorganotrophic Caldiserica (33.0%) and Dictyoglomi (24.8%). The benthic community and the previously examined planktonic community of Zavarzin spring have qualitatively similar, but quantitatively different, compositions. Conclusions In this study, we performed a metagenomic analysis of the benthic microbial mat of Zavarzin spring. We compared this benthic community to microbial communities found in the water and of an integral probe consisting of water and bottom sediments. Various phylogenetic groups of microorganisms, including potentially new ones, represent the full-fledged trophic system of Zavarzin. A thorough geochemical study of the spring was performed.
- Published
- 2014
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